BLASTP 2.2.17 [Aug-26-2007]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden, 
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= AT1G03000__[Arabidopsis_thaliana]
         (941 letters)

Database: nr.pal 
           6,348,806 sequences; 2,166,943,470 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22329309|ref|NP_171799.2|  PEX6 (PEROXIN6); ATPase [Arabi...  1752   0.0  
gi|4587578|gb|AAD25809.1|AC006550_17  Belongs to PF|00004 AT...  1731   0.0  
gi|157347804|emb|CAO22391.1|  unnamed protein product [Vitis...  1105   0.0  
gi|124360532|gb|ABN08542.1|  AAA ATPase, central region; L-l...  1049   0.0  
gi|14571708|emb|CAC42781.1|  peroxin 6 [Helianthus annuus]        977   0.0  
gi|115460572|ref|NP_001053886.1|  Os04g0617600 [Oryza sativa...   860   0.0  
gi|90399322|emb|CAH68334.1|  H0313F03.5 [Oryza sativa (indic...   860   0.0  
gi|168023880|ref|XP_001764465.1|  predicted protein [Physcom...   689   0.0  
gi|147780708|emb|CAN69109.1|  hypothetical protein [Vitis vi...   655   0.0  
gi|66801075|ref|XP_629463.1|  AAA ATPase domain-containing p...   456   e-126
gi|156405290|ref|XP_001640665.1|  predicted protein [Nematos...   454   e-125
gi|393291|gb|AAA16622.1|  ATPase                                  440   e-121
gi|50549031|ref|XP_501986.1|  YlPEX6 [Yarrowia lipolytica] >...   439   e-121
gi|118087771|ref|XP_415006.2|  PREDICTED: similar to Pxaaa1p...   437   e-120
gi|169853750|ref|XP_001833553.1|  hypothetical protein CC1G_...   428   e-117
gi|2911135|dbj|BAA24931.1|  peroxisome assembly factor-2 [Ra...   423   e-116
gi|16923976|ref|NP_476466.1|  peroxisomal biogenesis factor ...   423   e-116
gi|21703962|ref|NP_663463.1|  peroxisomal biogenesis factor ...   416   e-114
gi|71013254|ref|XP_758568.1|  hypothetical protein UM02421.1...   415   e-114
gi|109071184|ref|XP_001089644.1|  PREDICTED: peroxisomal bio...   412   e-113
gi|1354753|gb|AAC50655.1|  Pxaaa1p                                412   e-113
gi|12644408|sp|Q13608|PEX6_HUMAN  Peroxisome assembly factor...   412   e-113
gi|21361244|ref|NP_000278.2|  peroxisomal biogenesis factor ...   412   e-113
gi|109071186|ref|XP_001089520.1|  PREDICTED: peroxisomal bio...   412   e-113
gi|18147120|dbj|BAB83047.1|  peroxin Pex6p [Homo sapiens] >g...   411   e-112
gi|34013298|gb|AAL06143.1|  peroxisomal biogenesis factor 6-...   411   e-112
gi|109071188|ref|XP_001089293.1|  PREDICTED: peroxisomal bio...   410   e-112
gi|67967985|dbj|BAE00474.1|  unnamed protein product [Macaca...   410   e-112
gi|52782257|dbj|BAD51975.1|  peroxin Pex6p [Macaca fascicula...   409   e-112
gi|6324000|ref|NP_014070.1|  AAA-peroxin that heterodimerize...   406   e-111
gi|151944222|gb|EDN62501.1|  AAA ATPase [Saccharomyces cerev...   406   e-111
gi|76650189|ref|XP_869118.1|  PREDICTED: similar to Pxaaa1p ...   405   e-111
gi|642339|emb|CAA58229.1|  peroxisome biogenesis invlved pro...   405   e-110
gi|164655783|ref|XP_001729020.1|  hypothetical protein MGL_3...   404   e-110
gi|160333758|ref|NP_001103896.1|  peroxisomal biogenesis fac...   404   e-110
gi|147223350|emb|CAN13170.1|  peroxisomal biogenesis factor ...   404   e-110
gi|149732542|ref|XP_001497326.1|  PREDICTED: similar to pero...   402   e-110
gi|73972840|ref|XP_538926.2|  PREDICTED: similar to Peroxiso...   400   e-109
gi|68482222|ref|XP_714995.1|  peroxisomal biogenesis AAA ATP...   400   e-109
gi|73972838|ref|XP_865117.1|  PREDICTED: similar to Peroxiso...   400   e-109
gi|91079548|ref|XP_971331.1|  PREDICTED: similar to CG11919-...   399   e-109
gi|58270968|ref|XP_572640.1|  hypothetical protein CNI03110 ...   399   e-109
gi|134115096|ref|XP_773846.1|  hypothetical protein CNBH2980...   397   e-108
gi|156841391|ref|XP_001644069.1|  hypothetical protein Kpol_...   390   e-106
gi|50308075|ref|XP_454038.1|  unnamed protein product [Kluyv...   388   e-105
gi|146422813|ref|XP_001487341.1|  hypothetical protein PGUG_...   387   e-105
gi|149247677|ref|XP_001528247.1|  peroxisomal biogenesis fac...   387   e-105
gi|51701840|sp|Q9C1E9|PEX6_GLOLA  Peroxisomal biogenesis fac...   386   e-105
gi|170041873|ref|XP_001848672.1|  peroxisome assembly factor...   385   e-105
gi|150865419|ref|XP_001384629.2|  peroxisomal assembly prote...   384   e-104
gi|45201490|ref|NP_987060.1|  AGR394Wp [Ashbya gossypii ATCC...   384   e-104
gi|51701862|sp|Q9UVU5|PEX6_PICAN  Peroxisomal biogenesis fac...   383   e-104
gi|145252002|ref|XP_001397514.1|  hypothetical protein An16g...   383   e-104
gi|158301859|ref|XP_321486.3|  AGAP001612-PA [Anopheles gamb...   381   e-103
gi|115920972|ref|XP_785189.2|  PREDICTED: similar to peroxis...   380   e-103
gi|169603057|ref|XP_001794950.1|  hypothetical protein SNOG_...   378   e-102
gi|51701844|sp|Q9HG03|PEX6_PENCH  Peroxisomal biogenesis fac...   377   e-102
gi|157104997|ref|XP_001648668.1|  peroxisome assembly factor...   377   e-102
gi|116182002|ref|XP_001220850.1|  hypothetical protein CHGG_...   376   e-102
gi|85117512|ref|XP_965276.1|  peroxisomal biogenesis factor ...   376   e-102
gi|50420813|ref|XP_458947.1|  hypothetical protein DEHA0D121...   375   e-102
gi|71000221|ref|XP_754814.1|  peroxisome biosynthesis protei...   374   e-101
gi|156555177|ref|XP_001603458.1|  PREDICTED: similar to pero...   374   e-101
gi|115385012|ref|XP_001209053.1|  peroxisomal biogenesis fac...   371   e-100
gi|119492549|ref|XP_001263640.1|  peroxisome assembly factor...   371   e-100
gi|109071190|ref|XP_001089187.1|  PREDICTED: peroxisomal bio...   370   e-100
gi|39974649|ref|XP_368715.1|  hypothetical protein MGG_00529...   369   e-100
gi|78707192|ref|NP_001027403.1|  CG11919 CG11919-PA [Drosoph...   367   2e-99
gi|119195945|ref|XP_001248576.1|  peroxisomal biogenesis fac...   366   4e-99
gi|169767894|ref|XP_001818418.1|  [Aspergillus oryzae] >gi|8...   365   1e-98
gi|121705106|ref|XP_001270816.1|  peroxisome assembly factor...   364   1e-98
gi|67524935|ref|XP_660529.1|  hypothetical protein AN2925.2 ...   363   4e-98
gi|159127824|gb|EDP52939.1|  peroxisome biosynthesis protein...   362   8e-98
gi|156062650|ref|XP_001597247.1|  hypothetical protein SS1G_...   362   9e-98
gi|46122437|ref|XP_385772.1|  hypothetical protein FG05596.1...   360   4e-97
gi|19114380|ref|NP_593468.1|  peroxin-6 (predicted) [Schizos...   359   7e-97
gi|464347|sp|P33289|PEX6_PICPA  Peroxisomal biogenesis facto...   358   2e-96
gi|50286197|ref|XP_445527.1|  unnamed protein product [Candi...   357   2e-96
gi|154284786|ref|XP_001543188.1|  peroxisomal biogenesis fac...   353   4e-95
gi|154308912|ref|XP_001553791.1|  hypothetical protein BC1G_...   337   2e-90
gi|71419636|ref|XP_811227.1|  peroxisome assembly protein, p...   329   7e-88
gi|118371283|ref|XP_001018841.1|  ATPase, AAA family protein...   328   2e-87
gi|77927260|gb|ABB05505.1|  PEX6 [Trypanosoma brucei]             316   7e-84
gi|72389534|ref|XP_845062.1|  peroxisome assembly protein, p...   316   7e-84
gi|146082384|ref|XP_001464496.1|  peroxisome assembly protei...   315   9e-84
gi|47213387|emb|CAF93340.1|  unnamed protein product [Tetrao...   314   3e-83
gi|154334731|ref|XP_001563612.1|  peroxisome assembly protei...   311   2e-82
gi|157867059|ref|XP_001682084.1|  peroxisome assembly protei...   310   3e-82
gi|157126628|ref|XP_001654680.1|  spermatogenesis associated...   296   6e-78
gi|125808288|ref|XP_001360696.1|  GA15351-PA [Drosophila pse...   295   9e-78
gi|161076488|ref|NP_001097250.1|  TER94 CG2331-PD, isoform D...   295   1e-77
gi|123469082|ref|XP_001317755.1|  spermatogenesis associated...   295   1e-77
gi|3337433|gb|AAC27447.1|  transitional endoplasmic reticulu...   295   1e-77
gi|91086235|ref|XP_966692.1|  PREDICTED: similar to CG2331-P...   295   1e-77
gi|17137560|ref|NP_477369.1|  TER94 CG2331-PA, isoform A [Dr...   295   1e-77
gi|56758882|gb|AAW27581.1|  SJCHGC09453 protein [Schistosoma...   295   2e-77
gi|161076486|ref|NP_001097249.1|  TER94 CG2331-PC, isoform C...   294   2e-77
gi|158294507|ref|XP_315644.3|  AGAP005630-PA [Anopheles gamb...   294   2e-77
gi|170036949|ref|XP_001846323.1|  spermatogenesis associated...   294   3e-77
gi|156548829|ref|XP_001605497.1|  PREDICTED: similar to ENSA...   291   2e-76

>gi|22329309|ref|NP_171799.2| PEX6 (PEROXIN6); ATPase [Arabidopsis thaliana]
 gi|19310449|gb|AAL84960.1| At1g03000/F22D16.27 [Arabidopsis thaliana]
 gi|24797060|gb|AAN64542.1| At1g03000/F22D16.27 [Arabidopsis thaliana]
 gi|37223130|gb|AAQ90161.1| AAA family ATPase peroxin 6 [Arabidopsis thaliana]
          Length = 941

 Score = 1752 bits (4537), Expect = 0.0,   Method: Composition-based stats.
 Identities = 896/941 (95%), Positives = 896/941 (95%)

Query: 1   MVERRNPXXXXXXXXXXXXXXXXXQPSSADGDRVLNKDGDLLRGNARLSAGILRWRKDGE 60
           MVERRNP                 QPSSADGDRVLNKDGDLLRGNARLSAGILRWRKDGE
Sbjct: 1   MVERRNPLVLSSTRSTLRSVLNSSQPSSADGDRVLNKDGDLLRGNARLSAGILRWRKDGE 60

Query: 61  NVXXXXXXXXXXXXXVGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPPKTTLE 120
           NV             VGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPPKTTLE
Sbjct: 61  NVSDAKLDSLDDSALVGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPPKTTLE 120

Query: 121 DASLTQVPVSDSLHTMLVFPTYDLMGQQLLDQEVAYLSPMLAFNLSLHISCLKSLVHRGN 180
           DASLTQVPVSDSLHTMLVFPTYDLMGQQLLDQEVAYLSPMLAFNLSLHISCLKSLVHRGN
Sbjct: 121 DASLTQVPVSDSLHTMLVFPTYDLMGQQLLDQEVAYLSPMLAFNLSLHISCLKSLVHRGN 180

Query: 181 GVLEKYFEAKCDEEFIGKSAEDGSKIGLDLEPVSQVPGYASHLRVSFVKIPECGTIPSLK 240
           GVLEKYFEAKCDEEFIGKSAEDGSKIGLDLEPVSQVPGYASHLRVSFVKIPECGTIPSLK
Sbjct: 181 GVLEKYFEAKCDEEFIGKSAEDGSKIGLDLEPVSQVPGYASHLRVSFVKIPECGTIPSLK 240

Query: 241 VNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQRLCSESDD 300
           VNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQRLCSESDD
Sbjct: 241 VNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQRLCSESDD 300

Query: 301 YIYFKVIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEETVNILA 360
           YIYFKVIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEETVNILA
Sbjct: 301 YIYFKVIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEETVNILA 360

Query: 361 SVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERK 420
           SVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERK
Sbjct: 361 SVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERK 420

Query: 421 TSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVS 480
           TSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVS
Sbjct: 421 TSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVS 480

Query: 481 NGDXXXXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQ 540
           NGD               VGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQ
Sbjct: 481 NGDSSMEEKSNSNFSENEVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQ 540

Query: 541 RSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKK 600
           RSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKK
Sbjct: 541 RSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKK 600

Query: 601 INSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDV 660
           INSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDV
Sbjct: 601 INSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDV 660

Query: 661 GGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFL 720
           GGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFL
Sbjct: 661 GGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFL 720

Query: 721 SVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVV 780
           SVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVV
Sbjct: 721 SVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVV 780

Query: 781 SQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKA 840
           SQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKA
Sbjct: 781 SQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKA 840

Query: 841 LTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDP 900
           LTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDP
Sbjct: 841 LTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDP 900

Query: 901 DSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRSS 941
           DSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRSS
Sbjct: 901 DSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRSS 941



>gi|4587578|gb|AAD25809.1|AC006550_17 Belongs to PF|00004 ATPases associated with various cellular
           activities. [Arabidopsis thaliana]
          Length = 983

 Score = 1731 bits (4482), Expect = 0.0,   Method: Composition-based stats.
 Identities = 896/983 (91%), Positives = 896/983 (91%), Gaps = 42/983 (4%)

Query: 1   MVERRNPXXXXXXXXXXXXXXXXXQPSSADGDRVLNKDGDLLRGNARLSAGILRWRKDGE 60
           MVERRNP                 QPSSADGDRVLNKDGDLLRGNARLSAGILRWRKDGE
Sbjct: 1   MVERRNPLVLSSTRSTLRSVLNSSQPSSADGDRVLNKDGDLLRGNARLSAGILRWRKDGE 60

Query: 61  NVXXXXXXXXXXXXXVGLSTQLLKRLSINSGSLV-------------------------- 94
           NV             VGLSTQLLKRLSINSGSLV                          
Sbjct: 61  NVSDAKLDSLDDSALVGLSTQLLKRLSINSGSLVCPSHLVQSTKLDLFWIILLLLMLTIE 120

Query: 95  ------VVKNIEIGIQRVAQVVVLDPPKTTLEDASLTQVPVSDSLHTMLVFPTYDLMGQQ 148
                 VVKNIEIGIQRVAQVVVLDPPKTTLEDASLTQVPVSDSLHTMLVFPTYDLMGQQ
Sbjct: 121 FLKCKVVVKNIEIGIQRVAQVVVLDPPKTTLEDASLTQVPVSDSLHTMLVFPTYDLMGQQ 180

Query: 149 LLDQEVAYLSPMLAFNLSLHISCLKSLVHRGNGVLEKYFEAKCDEEFIGKSAEDGSKIGL 208
           LLDQEVAYLSPMLAFNLSLHISCLKSLVHRGNGVLEKYFEAKCDEEFIGKSAEDGSKIGL
Sbjct: 181 LLDQEVAYLSPMLAFNLSLHISCLKSLVHRGNGVLEKYFEAKCDEEFIGKSAEDGSKIGL 240

Query: 209 DLEPVSQVPGYASHLRVSFVKIPECGTIPSLKVNSSFEAEERQGLIDSALQKYFGTDRQL 268
           DLEPVSQVPGYASHLRVSFVKIPECGTIPSLKVNSSFEAEERQGLIDSALQKYFGTDRQL
Sbjct: 241 DLEPVSQVPGYASHLRVSFVKIPECGTIPSLKVNSSFEAEERQGLIDSALQKYFGTDRQL 300

Query: 269 SRGDIFRIYIDWNCGSSICNPCSQRLCSESDDYIYFKVIAMEPSNERFLRVNHSQTALVL 328
           SRGDIFRIYIDWNCGSSICNPCSQRLCSESDDYIYFKVIAMEPSNERFLRVNHSQTALVL
Sbjct: 301 SRGDIFRIYIDWNCGSSICNPCSQRLCSESDDYIYFKVIAMEPSNERFLRVNHSQTALVL 360

Query: 329 GGTVSSGLPPDLLVYRSKVPMPLQEETVNILASVLSPPLCPSALASKLRVAVLLHGIPGC 388
           GGTVSSGLPPDLLVYRSKVPMPLQEETVNILASVLSPPLCPSALASKLRVAVLLHGIPGC
Sbjct: 361 GGTVSSGLPPDLLVYRSKVPMPLQEETVNILASVLSPPLCPSALASKLRVAVLLHGIPGC 420

Query: 389 GKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVF 448
           GKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVF
Sbjct: 421 GKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVF 480

Query: 449 KNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDXXXXXXXXXXXXXXXVGKFRGHQVL 508
           KNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNGD               VGKFRGHQVL
Sbjct: 481 KNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDSSMEEKSNSNFSENEVGKFRGHQVL 540

Query: 509 LIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQGVSQFLN----------I 558
           LIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQGVSQFLN          I
Sbjct: 541 LIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNVCEYNAPKLQI 600

Query: 559 SSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHGVDIHQASQ 618
           SSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHGVDIHQASQ
Sbjct: 601 SSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHGVDIHQASQ 660

Query: 619 IDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPL 678
           IDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPL
Sbjct: 661 IDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPL 720

Query: 679 LHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 738
           LHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN
Sbjct: 721 LHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKN 780

Query: 739 VRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLF 798
           VRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLF
Sbjct: 781 VRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLF 840

Query: 799 IIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAK 858
           IIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAK
Sbjct: 841 IIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAK 900

Query: 859 KCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLS 918
           KCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLS
Sbjct: 901 KCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLS 960

Query: 919 PSLSITELKKYEMLRDQFQGRSS 941
           PSLSITELKKYEMLRDQFQGRSS
Sbjct: 961 PSLSITELKKYEMLRDQFQGRSS 983



>gi|157347804|emb|CAO22391.1| unnamed protein product [Vitis vinifera]
          Length = 921

 Score = 1105 bits (2857), Expect = 0.0,   Method: Composition-based stats.
 Identities = 590/945 (62%), Positives = 702/945 (74%), Gaps = 30/945 (3%)

Query: 1   MVERRNPXXXXXXXXXXXXXXXXXQPSSADGDRVLNKDGDLLRGNARLSAGILRWRKDGE 60
           MVERR P                 + +  DG        +       L  GILR   +  
Sbjct: 1   MVERRKPLVLSSTKILLDSIRNSARLNKRDGVTGNELSANESSPTLHLPVGILRLSDEKS 60

Query: 61  NVXXXXXXXXXXXXXVGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPPKTTLE 120
                          VGL T  LKRLS+ SGS V+V+N+E  + R+A VVVLD P+    
Sbjct: 61  VSSDPKLALLDDSALVGLPTSALKRLSVTSGSPVLVRNVETNVWRIAHVVVLDSPRAH-G 119

Query: 121 DASLTQVPVSDSLHTMLVFPT--YDLMGQQLLDQEVAYLSPMLAFNLSLHISCLKSLVHR 178
            +S +++P+S S HTML+FP+  Y      LLD EVAYLSP+LAFNL LHISCLKSLVH+
Sbjct: 120 HSSDSKLPLSHSPHTMLIFPSLKYPQNDSVLLDGEVAYLSPLLAFNLDLHISCLKSLVHQ 179

Query: 179 GNGVLEKYFEAKCDEEFIGKSAEDGSKIGLDLEPVSQVPGYASHLRVSFVKIPECGTIPS 238
           G   L   FEAK DEE  G+ +E  S I L LE  +++P +ASHLR SFVKIPECGT+ S
Sbjct: 180 GKETLAYLFEAKADEETRGRGSE-ASPISLSLEQSARLPRFASHLRASFVKIPECGTLES 238

Query: 239 LKVNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQRLCSES 298
           L+ NSS EAE+RQ +ID AL  YF  DR L+RGD+F + I WNC S +C PCSQR+ + S
Sbjct: 239 LQGNSSIEAEDRQEMIDLALHNYFKVDRYLARGDLFSVGIKWNCRSVMCIPCSQRMQNAS 298

Query: 299 DDYIYFKVIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEETVNI 358
           DD I+FKV+AMEP++E  LRVN +QTALVLGG+V S +PPDLL+  SK  MPLQ +TV +
Sbjct: 299 DDIIHFKVVAMEPADEPVLRVNCTQTALVLGGSVPSAVPPDLLIGGSKGFMPLQADTVKM 358

Query: 359 LASVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSE 418
           LAS+L+P +CPS LASKLRV VLL+ + G GKRTV+++VA+RLGLH+VE+SCH+L++S+E
Sbjct: 359 LASILTPLVCPSTLASKLRVTVLLYVVAGAGKRTVIRHVAQRLGLHIVEYSCHNLMSSAE 418

Query: 419 RKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEP 478
           RKTS ALAQ FN A RYSPTILLLRHFDVF+   +Q+GS  D+VG++ E+ASVIR+ TEP
Sbjct: 419 RKTSVALAQVFNTAHRYSPTILLLRHFDVFR---TQEGSSNDQVGIASEVASVIRKFTEP 475

Query: 479 VSNGDXXXXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLND 538
           V   +                 K + HQVLL+A+A+S+EG+ PTIRRCFSHEIRMG L +
Sbjct: 476 VIEDEDIYSEKKLTSDFLKDAEKIKRHQVLLVAAADSSEGLPPTIRRCFSHEIRMGPLTE 535

Query: 539 EQRSEMLSQSLQGVSQFL-NISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESE 597
           EQR++MLSQSLQ +S+ L N  S++F+K +VGQTSGF+ RD++AL+AD GANL       
Sbjct: 536 EQRAKMLSQSLQSISELLPNTDSEDFIKDIVGQTSGFMLRDMRALIADTGANL------- 588

Query: 598 TKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKW 657
             +  ++ D          ++      ++  K+D  KAL+RSKKRNASALG PKVPNVKW
Sbjct: 589 MPRFKAVQD----------TKSCEEAPQVLGKDDLAKALERSKKRNASALGTPKVPNVKW 638

Query: 658 DDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSL 717
           +DVGGLEDVK SILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSL
Sbjct: 639 EDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSL 698

Query: 718 NFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMD 777
           NFLSVKGPELINMYIGESEKNVRDIF+KARSARPCVIFFDELDSLAPARGASGDSGGVMD
Sbjct: 699 NFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMD 758

Query: 778 RVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERV 837
           RVVSQMLAEIDGL+DS+QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVN+D SYRERV
Sbjct: 759 RVVSQMLAEIDGLNDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDTSYRERV 818

Query: 838 LKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKV--SKSDSGDMPT 895
           LKALTRKF L EDVSLYS+AKKCP  FTGADMYALCADAWFQAAKRKV    SDS  M  
Sbjct: 819 LKALTRKFMLHEDVSLYSIAKKCPPNFTGADMYALCADAWFQAAKRKVLSPPSDSSSM-- 876

Query: 896 EEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRS 940
            E+  DSV++ Y DF+K +  L+PSLS+ ELKKYE LRDQF+G S
Sbjct: 877 -ENQADSVIIRYDDFVKVLRDLTPSLSVAELKKYERLRDQFEGAS 920



>gi|124360532|gb|ABN08542.1| AAA ATPase, central region; L-lactate dehydrogenase [Medicago
           truncatula]
          Length = 924

 Score = 1049 bits (2712), Expect = 0.0,   Method: Composition-based stats.
 Identities = 558/873 (63%), Positives = 667/873 (76%), Gaps = 16/873 (1%)

Query: 76  VGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPPKTTLEDASLTQVPVSDSLHT 135
           + LST LLK LSI SGS V+VKN E+  QRVA  + LDPP +      +   P + S   
Sbjct: 59  IALSTSLLKTLSITSGSPVLVKNAEMNTQRVAVAIALDPPSSDTTTLDIDHSPPASS-RI 117

Query: 136 MLVFPTYDL-MGQQLLDQEVAYLSPMLAFNLSLHISCLKSLVHRGNGVLEKYFEAKCD-- 192
           MLVFP+ D  +   LL+ E+AYLSP+LAFNL+LHISCLKS++H     L  YF+ +C   
Sbjct: 118 MLVFPSCDFPLNGPLLNGEIAYLSPLLAFNLNLHISCLKSIIHNSQDALASYFKPQCQVG 177

Query: 193 EEFIGKSAEDGSKIGLDLEPVSQVPGYASHLRVSFVKIPECGTIPSLKVNSSFEAEERQG 252
           +E   KS ED S I ++L+P++Q P +AS LRV+FVKIPECG + S+K  S  E++ERQ 
Sbjct: 178 DEDAAKSFED-SVINIELKPLAQPPRFASLLRVAFVKIPECGILDSIKPISDVESKERQD 236

Query: 253 LIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQRLCSESDDYIYFKVIAMEPS 312
           +ID ALQKYF  DR LS GD+F I I WNC S+IC PC+Q+   ++++ I FKVIAMEPS
Sbjct: 237 MIDLALQKYFEVDRYLSSGDVFGISISWNCNSTICIPCNQK-TQKNENIICFKVIAMEPS 295

Query: 313 NERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEETVNILASVLSPPLCPSAL 372
           +E  LRVN + TALVL G+  S LPPDLL    + P+PLQ +TV ILAS+L+P LCPSAL
Sbjct: 296 DEPVLRVNKTLTALVLVGSSPSALPPDLLTTGPEGPVPLQRDTVKILASILAPTLCPSAL 355

Query: 373 ASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMA 432
           +SK RV+VLL+G+ GCGKRTVV+YVARRLGLHVVE++CH L  S   +TS ALAQ F  A
Sbjct: 356 SSKFRVSVLLYGLEGCGKRTVVRYVARRLGLHVVEYNCHDLTGSD--RTSVALAQAFKAA 413

Query: 433 RRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPV-SNGDXXXXXXXX 491
           +RYSPTILLLRHF+VF++  S + S  D+ G + E+ASVIR  TEPV  +GD        
Sbjct: 414 QRYSPTILLLRHFEVFRDSQSPEVSQNDQRGNTSEVASVIRRFTEPVGEHGDSNSLVKSN 473

Query: 492 XXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQG 551
                    K  GHQVLLIA+A+S+EG+  +IRRCFSHEI+MG L +EQR+EML  SLQ 
Sbjct: 474 GQFVEKNSEKTSGHQVLLIAAADSSEGLPASIRRCFSHEIKMGPLTEEQRAEMLLHSLQN 533

Query: 552 VSQF-LNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHG 610
           V     N   + F+K +VGQTSGF+PRD+ AL+ADAGANL+     E  K     +D   
Sbjct: 534 VYGLHSNTDLEGFVKEIVGQTSGFMPRDMCALIADAGANLFPGSNVEVGK--DQPEDSDS 591

Query: 611 VDIHQASQIDNSTE---KLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVK 667
             I + ++ +N +E   +   KED   AL+RSKKRNASALG PKVPNVKW+DVGGLEDVK
Sbjct: 592 SLISEVTEDNNESEVSARKPGKEDLVNALERSKKRNASALGTPKVPNVKWEDVGGLEDVK 651

Query: 668 TSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 727
            SILDTVQLPLLHKDLF+SGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL
Sbjct: 652 KSILDTVQLPLLHKDLFASGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 711

Query: 728 INMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEI 787
           INMYIGESEKNVRDIF+KARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEI
Sbjct: 712 INMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEI 771

Query: 788 DGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKL 847
           DGLSDS+QDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV +DA+YRERVLKALTRKFKL
Sbjct: 772 DGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVVSDATYRERVLKALTRKFKL 831

Query: 848 SEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEY 907
            EDVSLY++A KCP  FTGADMYALCADAWF AAKR+V  ++  +    ++D DS+VVEY
Sbjct: 832 HEDVSLYTIATKCPPNFTGADMYALCADAWFLAAKRRVLNAEP-ESSNPDNDADSIVVEY 890

Query: 908 VDFIKAMDQLSPSLSITELKKYEMLRDQFQGRS 940
            DF++ +++L PSLS+ ELKKYE+LRDQF+G S
Sbjct: 891 DDFVQVLEELQPSLSMAELKKYELLRDQFEGTS 923



>gi|14571708|emb|CAC42781.1| peroxin 6 [Helianthus annuus]
          Length = 908

 Score =  977 bits (2525), Expect = 0.0,   Method: Composition-based stats.
 Identities = 534/899 (59%), Positives = 649/899 (72%), Gaps = 55/899 (6%)

Query: 47  RLSAGILRWRKDGENVXXXXXXXXXXXXXVGLSTQLLKRLSINSGSLVVVKNIEIGIQRV 106
           +L AGILR   +   +             +GLST LLKRLSI SGSLV+VKN++  IQR+
Sbjct: 60  QLRAGILRLSDEKLGLSRQKAISLDEAALIGLSTSLLKRLSITSGSLVIVKNVDSQIQRI 119

Query: 107 AQVVVLDPPKTTLEDASLTQVPVS-DSLHTMLVFP--TYDLMGQQLLDQEVAYLSPMLAF 163
           +Q+V LDPP   + D S     +S ++ + M+VFP  TY L+    L  EVAY+SP+LAF
Sbjct: 120 SQIVALDPP--NVHDVSANNELLSYNASNAMVVFPSVTYPLIHHVPLASEVAYVSPLLAF 177

Query: 164 NLSLHISCLKSLVHRGNGVLEKYFEAKCDEEFIGKSAEDGSKIGLDLEPVSQVPGYASHL 223
           NL LH SCLK L+H G   L   FE K D E   ++ E G  + LD++P+++        
Sbjct: 178 NLGLHTSCLKLLLHHGEDKLASLFEVKGDNESDLETNE-GFSVNLDIKPLTK-------- 228

Query: 224 RVSFVKIPECGTIPSLKVNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRIYIDWNCG 283
                       +PSLK+ +          ID AL +YF  DR LSRGD+F I ++W+C 
Sbjct: 229 ------------LPSLKIVNK--------KIDIALNEYFTIDRYLSRGDVFSIRVNWSCK 268

Query: 284 SSICNPCSQRLCSESDDYIYFKVIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVY 343
           S++C  CSQ   +  D  +YFKV+A EPS E  LR+N ++TALVL  +  S +PP+LLV 
Sbjct: 269 SAMCIACSQNNQNSRDTNLYFKVVAAEPSEEPVLRINRTETALVLSASTPSAIPPNLLVN 328

Query: 344 RSKVPMPLQEETVNILASVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGL 403
           + K   PL ++TV  LAS+++P LCPSAL+SK RVAVLL G+PGCGKRTVVK+VA +LGL
Sbjct: 329 KKKGFSPLHQDTVKTLASIITPTLCPSALSSKFRVAVLLFGLPGCGKRTVVKHVAHQLGL 388

Query: 404 HVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVG 463
           HVVE+SCH L+ASSE +    +  +F+    YSPTILLLRHFD F NL S DGS  D++G
Sbjct: 389 HVVEYSCHDLVASSEMENFCHVDSSFHCCS-YSPTILLLRHFDAFSNLSSNDGSPNDQIG 447

Query: 464 VSFEIASVIRELTEPVSNGDXXXXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTI 523
           V+ E+ASVIRE TEP +  +                  +  H VLL+ASA+++EG+ PTI
Sbjct: 448 VNSEVASVIREFTEPFTQDEDDYEDEDEAEHMNSTRAIYT-HPVLLVASADNSEGLPPTI 506

Query: 524 RRCFSHEIRMGSLNDEQRSEMLSQSLQGVSQFL-NISSDEFMKGLVGQTSGFLPRDLQAL 582
           RRCFSHE++MG L ++QR E+LSQSLQ + + L ++S ++  K +VGQTSGF+PRD++AL
Sbjct: 507 RRCFSHEMKMGPLTEDQRVELLSQSLQRIPELLPDMSPEDLAKDMVGQTSGFMPRDIRAL 566

Query: 583 VADAGANLYISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKR 642
           +ADA ++L  +        N +S +      ++ SQ D       +KE  +KAL+RSKKR
Sbjct: 567 IADASSSLVPT--------NGISFE------NKESQKDIQP---PSKEFMSKALERSKKR 609

Query: 643 NASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGT 702
           NASALG PKVPNVKW+DVGGLEDVK SILDTVQLPLLHKDLFSSGLR+ SGVLLYGPPGT
Sbjct: 610 NASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRRSSGVLLYGPPGT 669

Query: 703 GKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSL 762
           GKTLLAKAVATEC LNFLSVKGPELINMYIGESEKNVRDIF+KAR+ARPCVIFFDELDSL
Sbjct: 670 GKTLLAKAVATECFLNFLSVKGPELINMYIGESEKNVRDIFQKARAARPCVIFFDELDSL 729

Query: 763 APARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKL 822
           APARGASGDSGGVMDRVVSQMLAEIDGL+DSSQDLFIIGASNRPDLID ALLRPGRFDKL
Sbjct: 730 APARGASGDSGGVMDRVVSQMLAEIDGLNDSSQDLFIIGASNRPDLIDAALLRPGRFDKL 789

Query: 823 LYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAK 882
           LYVGV  D SYRERVLKALTRKFKL EDVSLYS+AKKCP  FTGADMYALCADAWF AAK
Sbjct: 790 LYVGVTTDPSYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAK 849

Query: 883 RKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRSS 941
           RKV  +D+ D    +DD DSVVVEY DF+  + +LSPSLS+ ELKKYEMLRDQF+G SS
Sbjct: 850 RKVLAADA-DPTNMKDDVDSVVVEYEDFVTVLRELSPSLSLAELKKYEMLRDQFEGASS 907



>gi|115460572|ref|NP_001053886.1| Os04g0617600 [Oryza sativa (japonica cultivar-group)]
 gi|38345607|emb|CAD41890.2| OSJNBa0093O08.9 [Oryza sativa (japonica cultivar-group)]
 gi|113565457|dbj|BAF15800.1| Os04g0617600 [Oryza sativa (japonica cultivar-group)]
 gi|125591647|gb|EAZ31997.1| hypothetical protein OsJ_015480 [Oryza sativa (japonica
           cultivar-group)]
          Length = 940

 Score =  860 bits (2222), Expect = 0.0,   Method: Composition-based stats.
 Identities = 470/883 (53%), Positives = 598/883 (67%), Gaps = 34/883 (3%)

Query: 76  VGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPPKTTLEDASLTQ--VPVS--- 130
           V L +  L+RL++ +G+ V+VKN +  + R+A+ VVLD P     D SLT+   PV    
Sbjct: 73  VALPSSALRRLAVVTGTPVLVKNADNNVGRIAKAVVLDHP---CLDDSLTEHTEPVDAAS 129

Query: 131 --DSLHTMLVFPTYDLMGQQLLDQEVAYLSPMLAFNLSLHISCLKSLVHRGNGVLEKYFE 188
             D+   +L   ++   G   LD+EVAY+SP+LAFNL +H+SCLK LV +G    +  F 
Sbjct: 130 PLDNAMGILPCRSFPTNGFPPLDEEVAYVSPLLAFNLGVHVSCLKLLVQKGEKPFK--FC 187

Query: 189 AKCDEEFIGKSAEDGSKIGLDLEPVSQVPGYASHLRVSFVKIPECGTIPSLKVNSSFEAE 248
           +K ++  +    E    + L++ P  QVP +A HLRVS V+IPECG   SLK NS+    
Sbjct: 188 SKVEDSDLAAGEESNPILHLEILPSPQVPKHALHLRVSVVRIPECGVFASLKANSAIGGS 247

Query: 249 ERQGLIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQ---RLCSESDDYIYFK 305
           + Q +ID AL ++F  DR L+RGD+F I  +WNCG++ C  C++   RL     D IYFK
Sbjct: 248 DYQDMIDQALNEHFKFDRFLARGDVFCIRNNWNCGATSCLACNREDNRL--HPHDMIYFK 305

Query: 306 VIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEETVNILASVLSP 365
           V  MEPS+E   RVN +QTALVLGG  S+ +PP  L       +PL  E V  LAS+++P
Sbjct: 306 VTGMEPSDEPVHRVNCNQTALVLGGGASASIPPYSLFASPGASVPLHSEIVEHLASIIAP 365

Query: 366 PLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTAL 425
            LCPS +  K++ +  L+G  GCGKRTVVK+VA   GLHVVE SCH L+ SS+     AL
Sbjct: 366 ALCPSNILPKVKFSTFLYGPSGCGKRTVVKHVANHFGLHVVECSCHDLMTSSDSGAPAAL 425

Query: 426 AQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIREL-------TEP 478
              F  A +YSP I+LLRHFD   N  S +G+   + G +  I SVI++        TE 
Sbjct: 426 VAAFKEAHKYSPCIILLRHFDAIGNTSSNEGTQSAQSGTAANIESVIKQYIGQHWVATES 485

Query: 479 VSNGDXXXXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLND 538
           +   D               +      QV+L+A+A+  EG+  +IRRCF HEI M S+N+
Sbjct: 486 LPARDINGNPYLVEPECVSPL------QVILVATADRAEGMPQSIRRCFRHEINMKSINE 539

Query: 539 EQRSEMLSQSLQGVSQFLNIS-SDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESE 597
           EQR  ++S++L  VS   + S +D+F+K L  QTSGF+PRD+ ALVADAG +   + + E
Sbjct: 540 EQRRNLISETLHCVSTSADESINDKFVKDLAVQTSGFMPRDILALVADAGISF--AHKVE 597

Query: 598 TKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKW 657
           T K NS  D L G+ +  +S    + EK   KE    +L+R+KKRN +ALG PKVPNVKW
Sbjct: 598 TDKNNSEGDKLKGI-LPTSSSSSQNEEKTFCKEYILSSLERAKKRNRAALGTPKVPNVKW 656

Query: 658 DDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSL 717
           +DVGGLE+VK  ILDT+QLPLL+K LFSS L KRSGVLLYGPPGTGKTLLAKAVATECSL
Sbjct: 657 EDVGGLEEVKKVILDTIQLPLLYKHLFSSKLGKRSGVLLYGPPGTGKTLLAKAVATECSL 716

Query: 718 NFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMD 777
           NFLSVKGPELINMY+GESEKNVRDIFEKARSARPCVIFFDELDSLAPARG+S DS GVMD
Sbjct: 717 NFLSVKGPELINMYVGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGSSSDSAGVMD 776

Query: 778 RVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERV 837
           RVVSQ+L EIDGLSD+SQDLFIIGA+NRPDL+D ALLRPGRFDKLLYVGVN+DASYRER+
Sbjct: 777 RVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYVGVNSDASYRERI 836

Query: 838 LKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEE 897
           LKA TRK+KL E+VSL S+A++CP  FTGAD+YALCADAW+ AAK      ++    T E
Sbjct: 837 LKAQTRKYKLHENVSLLSIAQQCPPNFTGADIYALCADAWYHAAKNLAKTLEADPSRTSE 896

Query: 898 DDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRS 940
              D V+VE  DF+  +  ++PSLSI EL+ YE LR + +G S
Sbjct: 897 ASADDVIVEINDFMTVLGDITPSLSIEELQNYEQLRKKIEGPS 939



>gi|90399322|emb|CAH68334.1| H0313F03.5 [Oryza sativa (indica cultivar-group)]
 gi|90399388|emb|CAH68418.1| H0818E11.8 [Oryza sativa (indica cultivar-group)]
 gi|125549753|gb|EAY95575.1| hypothetical protein OsI_016808 [Oryza sativa (indica
           cultivar-group)]
          Length = 940

 Score =  860 bits (2221), Expect = 0.0,   Method: Composition-based stats.
 Identities = 470/883 (53%), Positives = 598/883 (67%), Gaps = 34/883 (3%)

Query: 76  VGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPPKTTLEDASLTQ--VPVS--- 130
           V L +  L+RL++ +G+ V+VKN +  + R+A+ VVLD P     D SLT+   PV    
Sbjct: 73  VALPSSALRRLAVVTGTPVLVKNADNNVGRIAKAVVLDHP---CLDDSLTEHTEPVDAAS 129

Query: 131 --DSLHTMLVFPTYDLMGQQLLDQEVAYLSPMLAFNLSLHISCLKSLVHRGNGVLEKYFE 188
             D+   +L   ++   G   LD+EVAY+SP+LAFNL +H+SCLK LV +G    +  F 
Sbjct: 130 PLDNAMGILPCRSFPTNGFLPLDEEVAYVSPLLAFNLGVHVSCLKLLVQKGEKPFK--FC 187

Query: 189 AKCDEEFIGKSAEDGSKIGLDLEPVSQVPGYASHLRVSFVKIPECGTIPSLKVNSSFEAE 248
           +K ++  +    E    + L++ P  QVP +A HLRVS V+IPECG   SLK NS+    
Sbjct: 188 SKVEDSDLAAGEESNPILHLEILPSPQVPKHALHLRVSVVRIPECGVFASLKANSAIGGS 247

Query: 249 ERQGLIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQ---RLCSESDDYIYFK 305
           + Q +ID AL ++F  DR L+RGD+F I  +WNCG++ C  C++   RL     D IYFK
Sbjct: 248 DYQDMIDQALNEHFKFDRFLARGDVFCIRNNWNCGATSCLACNREDNRL--HPHDMIYFK 305

Query: 306 VIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEETVNILASVLSP 365
           V  MEPS+E   RVN +QTALVLGG  S+ +PP  L       +PL  E V  LAS+++P
Sbjct: 306 VTGMEPSDEPVHRVNCNQTALVLGGGASASIPPYSLFASPGASVPLHSEIVEHLASIIAP 365

Query: 366 PLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTAL 425
            LCPS +  K++ +  L+G  GCGKRTVVK+VA   GLHVVE SCH L+ SS+     AL
Sbjct: 366 ALCPSNILPKVKFSTFLYGPSGCGKRTVVKHVANHFGLHVVECSCHDLMTSSDSGAPAAL 425

Query: 426 AQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIREL-------TEP 478
              F  A +YSP I+LLRHFD   N  S +G+   + G +  I SVI++        TE 
Sbjct: 426 VAAFKEAHKYSPCIILLRHFDAIGNTSSNEGTQSAQSGTAANIESVIKQYIGQHWVATES 485

Query: 479 VSNGDXXXXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLND 538
           +   D               +      QV+L+A+A+  EG+  +IRRCF HEI M S+N+
Sbjct: 486 LPARDINGNPYLVEPECVSPL------QVILVATADRAEGMPQSIRRCFRHEINMKSINE 539

Query: 539 EQRSEMLSQSLQGVSQFLNIS-SDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESE 597
           EQR  ++S++L  VS   + S +D+F+K L  QTSGF+PRD+ ALVADAG +   + + E
Sbjct: 540 EQRRNLISETLHCVSTSADESINDKFVKDLAVQTSGFMPRDILALVADAGISF--AHKVE 597

Query: 598 TKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKW 657
           T K NS  D L G+ +  +S    + EK   KE    +L+R+KKRN +ALG PKVPNVKW
Sbjct: 598 TDKNNSEGDKLKGI-LPTSSSSSQNEEKTFCKEYILSSLERAKKRNRAALGTPKVPNVKW 656

Query: 658 DDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSL 717
           +DVGGLE+VK  ILDT+QLPLL+K LFSS L KRSGVLLYGPPGTGKTLLAKAVATECSL
Sbjct: 657 EDVGGLEEVKKVILDTIQLPLLYKHLFSSKLGKRSGVLLYGPPGTGKTLLAKAVATECSL 716

Query: 718 NFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMD 777
           NFLSVKGPELINMY+GESEKNVRDIFEKARSARPCVIFFDELDSLAPARG+S DS GVMD
Sbjct: 717 NFLSVKGPELINMYVGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGSSSDSAGVMD 776

Query: 778 RVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERV 837
           RVVSQ+L EIDGLSD+SQDLFIIGA+NRPDL+D ALLRPGRFDKLLYVGVN+DASYRER+
Sbjct: 777 RVVSQLLVEIDGLSDNSQDLFIIGATNRPDLLDSALLRPGRFDKLLYVGVNSDASYRERI 836

Query: 838 LKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEE 897
           LKA TRK+KL E+VSL S+A++CP  FTGAD+YALCADAW+ AAK      ++    T E
Sbjct: 837 LKAQTRKYKLHENVSLLSIAQQCPPNFTGADIYALCADAWYHAAKNLAKTLEADPSRTSE 896

Query: 898 DDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRS 940
              D V+VE  DF+  +  ++PSLSI EL+ YE LR + +G S
Sbjct: 897 ASADDVIVEINDFMTVLGDIAPSLSIEELQNYEQLRKKIEGPS 939



>gi|168023880|ref|XP_001764465.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684329|gb|EDQ70732.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 934

 Score =  689 bits (1777), Expect = 0.0,   Method: Composition-based stats.
 Identities = 420/937 (44%), Positives = 582/937 (62%), Gaps = 92/937 (9%)

Query: 76  VGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPP------KTTLEDASLTQVPV 129
           +GLS   L+ L+++SGS V+V+N+   + R A+V+VLDPP      K+ L++ S+     
Sbjct: 15  LGLSVSALRNLTLSSGSWVLVRNLITNVARPARVIVLDPPEMQSASKSDLDNGSVNLHKA 74

Query: 130 SDSLHTMLVFPTYDLMGQ-QLLDQEVAYLSPMLAFNLSLHISCLKSLVHRGNGVLEKYFE 188
           S+       FP++ +  + + ++ +VAYLS  LAFN+ LH++ L  L+ +G+   +K  E
Sbjct: 75  SEK---STFFPSFTVSEKIETVNHQVAYLSYPLAFNIGLHVAWLDMLIRKGSSD-DKDVE 130

Query: 189 AK---CDEEFIGKSAE---------DGSKI--GLDLEPVSQVPG----YASHLRVSFVKI 230
           +      +  +G S+           G K+   L  + V +V      YA+H+R++ ++ 
Sbjct: 131 STHPYSGDYLLGNSSTLELYPFHVYIGGKVPKSLAHQAVHKVSNGVFHYAAHMRIAHIRT 190

Query: 231 P-ECGTIPSLKVNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRIYI---DWNCGSSI 286
           P         K   +   ++RQ  ID+AL  YF  DR ++ GDI  I I   D +  +S 
Sbjct: 191 PASAANFSKEKDYLAALKKDRQERIDTALTNYFEVDRLVAIGDILSIRIPSPDPSFHASF 250

Query: 287 CNPCSQRLCSESDDYIYFKVIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYR-- 344
            +     + S  ++ I+FKV+ +EP + R   VN  +TALVLGG   S LPP +L +   
Sbjct: 251 GD-----VYSMQEELIHFKVLGLEPPSGRSSLVNRHKTALVLGGAEPSELPPPVLGFSKW 305

Query: 345 --SKVPMPLQEETVNI------LASVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKY 396
             S+ P+ L    ++       L S+ +P + P A    LR AV+LHG  G  KRT+VK 
Sbjct: 306 MSSRQPVCLSSPEISAPPEVQKLKSLFAPCIHPQASRLSLRTAVILHGPTGARKRTIVKM 365

Query: 397 VARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDG 456
            A  LGLHVV+ +C  LL ++E KT+TA+A  F  ARRY+P +LLLR F       S  G
Sbjct: 366 AAEELGLHVVDVNCFDLLGATENKTATAIADAFETARRYAPAVLLLRRFGALSK--SLSG 423

Query: 457 SLGDRVGVSFEIASVIRELTEP-------------------VSNGDXXXXXXXXXXXXXX 497
              D+      I + +RE                       +S  D              
Sbjct: 424 GGQDQPKSISLIGAALREGIHAHLEHNQEENFGSACDDQNSLSTSDLSMDTLSENEDEGP 483

Query: 498 XVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEML------SQSLQG 551
             G      VLL+ + ES E + P +RR F+H I +   ++ +R  +L      +Q    
Sbjct: 484 TPG-----LVLLVGALESKEDLKPALRRSFTHTIEVEGPDESRRLTLLHHFLGLTQETAS 538

Query: 552 VSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGAN-----LYISQESETKKINSLSD 606
           +S  L   S++  K +  QTSG  PRDL+AL  DA AN     L  S+E++     ++ +
Sbjct: 539 LSTALPQISEQ--KSVASQTSGSTPRDLRALAVDARANAVCRLLKSSKENKNHSNLTIEN 596

Query: 607 DLHGVDIHQASQIDNSTEKLTA---KEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGL 663
             H ++ H+  ++++ ++ + A    ED  +A DR KKR ASA+G PK+PNVKW+DVGGL
Sbjct: 597 GDHEINDHR--EVNHHSDVIVAPIESEDMQEAFDRLKKRTASAIGTPKIPNVKWEDVGGL 654

Query: 664 EDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVK 723
           EDVK +ILDTVQLPL+H++LF+SGLRKRSGVLLYGPPGTGKTLLAKAVATEC+LNFLSVK
Sbjct: 655 EDVKKAILDTVQLPLMHRELFASGLRKRSGVLLYGPPGTGKTLLAKAVATECALNFLSVK 714

Query: 724 GPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQM 783
           GPELINMYIGESEKNVRDIF+KAR+ARPCV+FFDELD+LAPARGA+GDSGGVMDRVVSQM
Sbjct: 715 GPELINMYIGESEKNVRDIFQKARAARPCVVFFDELDALAPARGAAGDSGGVMDRVVSQM 774

Query: 784 LAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTR 843
           LAEIDG+SD+ QDLF+IGASNRPDLIDPALLRPGRFDKLLYVGV+ ++++R RVL+ALTR
Sbjct: 775 LAEIDGISDNGQDLFMIGASNRPDLIDPALLRPGRFDKLLYVGVSTESTHRLRVLEALTR 834

Query: 844 KFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSV 903
           KFKL + VSL ++A++CP  FTGAD+YALCADAW   AKRKV+   S D   E ++ D+V
Sbjct: 835 KFKLDKYVSLPTIARRCPVNFTGADLYALCADAWMNGAKRKVNTCRSIDNGYEVNEDDTV 894

Query: 904 VVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRS 940
           VV+  DF+KA+ +++PSLS+ EL++YE +R Q++G S
Sbjct: 895 VVKQDDFLKALQEITPSLSLLELERYERIRQQYEGGS 931



>gi|147780708|emb|CAN69109.1| hypothetical protein [Vitis vinifera]
          Length = 1241

 Score =  655 bits (1690), Expect = 0.0,   Method: Composition-based stats.
 Identities = 344/539 (63%), Positives = 397/539 (73%), Gaps = 45/539 (8%)

Query: 427  QTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPV-SNGDXX 485
            +TF     YSPTILLLRHFDVF+   +Q+GS  D+VG++ E+ASVIR+ TEPV  + D  
Sbjct: 722  RTFQEEEMYSPTILLLRHFDVFR---TQEGSSNDQVGIASEVASVIRKFTEPVIEDEDIY 778

Query: 486  XXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEML 545
                           K + HQVLL+A+A+S+EG+ PTIRRCFSHEIRMG L +EQR++ML
Sbjct: 779  SEKKLTSDFQLKDAEKIKRHQVLLVAAADSSEGLPPTIRRCFSHEIRMGPLTEEQRAKML 838

Query: 546  SQSLQGVSQFL-NISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINSL 604
            SQSLQ +S+ L N  S++F+K +VGQTSGF+ RD++AL+AD GANL    ++   +    
Sbjct: 839  SQSLQSISELLPNTDSEDFIKDIVGQTSGFMLRDMRALIADTGANLXPRCQTNKLEPGGT 898

Query: 605  SDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLE 664
             + L    +      + + + L  K+D  KAL+RSKKRNASALG PKVPNVKW+DVGGLE
Sbjct: 899  DNSLRFKAVQDTKSCEEAPQVL-GKDDLAKALERSKKRNASALGTPKVPNVKWEDVGGLE 957

Query: 665  DVKTSILDTVQLPL---------------------LHKDLFSSGLRKRSGVLLYGPPGTG 703
            DVK SILDTVQ  +                       +  F SGLRKRSGVLLYGPPGTG
Sbjct: 958  DVKKSILDTVQFQMYGSSRITELEARKPDARLYLSFTRICFHSGLRKRSGVLLYGPPGTG 1017

Query: 704  KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLA 763
            KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF+KARSARPCVIFFDELDSLA
Sbjct: 1018 KTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLA 1077

Query: 764  PARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLL 823
            PARGASGDSGGVMDRVV             SQDLFIIGASNRPDLIDPALLRPGRFDKLL
Sbjct: 1078 PARGASGDSGGVMDRVV-------------SQDLFIIGASNRPDLIDPALLRPGRFDKLL 1124

Query: 824  YVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKR 883
            YVGVN+D SYRERVLKALTRKF L EDVSLYS+AKKCP  FTGADMYALCADAWFQAAKR
Sbjct: 1125 YVGVNSDTSYRERVLKALTRKFXLHEDVSLYSIAKKCPPNFTGADMYALCADAWFQAAKR 1184

Query: 884  KV--SKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRS 940
            KV    SDS  M   E+  DSV++ Y DF+K +  L+PSLS+ ELKKYE LRDQF+G S
Sbjct: 1185 KVLSPPSDSSSM---ENQADSVIIRYDDFVKVLRDLTPSLSVAELKKYERLRDQFEGAS 1240




 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 209/441 (47%), Positives = 263/441 (59%), Gaps = 54/441 (12%)

Query: 1   MVERRNPXXXXXXXXXXXXXXXXXQPSSADGDRVLNKDGDLLRGNA-----RLSAGILRW 55
           MVERR P                 + +  DG       G+ L  N       L  GILR 
Sbjct: 1   MVERRKPLVLSSTKILLDSIRNSARLNKRDG-----VTGNELSANESSPTLHLPVGILRL 55

Query: 56  RKDGENVXXXXXXXXXXXXXVGLSTQLLKRLSINSGSLVVVKNIEIGIQRVAQVVVLDPP 115
             +                 VGL T  LKRLS+ SGS V+V+N+E  + R+A VVVLD P
Sbjct: 56  SDEKSVSSDPKLALLDDSALVGLPTSALKRLSVTSGSPVLVRNVETNVWRIAHVVVLDSP 115

Query: 116 KTTLEDASLTQVPVSDSLHTMLVFPT--YDLMGQQLLDQEVAYLSPMLAFNLSLHISCLK 173
           +     +S +++P+S S HTML+FP+  Y      LLD EVAYLSP+LAFNL LHISCLK
Sbjct: 116 RAH-GHSSDSKLPLSHSPHTMLIFPSLKYPQNDSVLLDGEVAYLSPLLAFNLDLHISCLK 174

Query: 174 SLVHRGNGVLEKYFEAKCDEEFIGKSAEDGSKIGLDLEPVSQVPGYASHLRVSFVKIPEC 233
           SLVH+G   L   FEAK DEE  G+ +E  S I L LE  +++P +ASHLR SFVKIPEC
Sbjct: 175 SLVHQGKETLAYLFEAKADEETRGRGSE-ASPISLSLEQSARLPRFASHLRASFVKIPEC 233

Query: 234 GTIPSLKVNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQR 293
           GT+ SL+ NSS EAE+RQ +ID AL  YF  DR L+RGD+F + I WNC S +C PCSQR
Sbjct: 234 GTLESLQGNSSIEAEDRQEMIDLALHNYFKVDRYLARGDLFSVGIKWNCRSVMCIPCSQR 293

Query: 294 LCSESDDYIYFKVIAMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQE 353
           + + SDD I+FKV+AMEP++E  LRVN +QTALVLGG+V S +PPDLL+  SK       
Sbjct: 294 MQNASDDIIHFKVVAMEPADEPVLRVNCTQTALVLGGSVPSAVPPDLLIGGSK------- 346

Query: 354 ETVNILASVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSL 413
                                            G GKRTV+++VA+RLGLH+VE+SCH+L
Sbjct: 347 ---------------------------------GAGKRTVIRHVAQRLGLHIVEYSCHNL 373

Query: 414 LASSERKTSTALAQTFNMARR 434
           ++S+ERKTS ALAQ FN A R
Sbjct: 374 MSSAERKTSVALAQVFNTAHR 394




 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 3/94 (3%)

Query: 377  RVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYS 436
            R  VLL+G PG GK  + K VA    L+ +      L+     ++   +   F  AR   
Sbjct: 1005 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSAR 1064

Query: 437  PTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIAS 470
            P ++    FD   +L    G+ GD  GV   + S
Sbjct: 1065 PCVIF---FDELDSLAPARGASGDSGGVMDRVVS 1095



>gi|66801075|ref|XP_629463.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
 gi|60462869|gb|EAL61068.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
          Length = 1201

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 253/641 (39%), Positives = 389/641 (60%), Gaps = 45/641 (7%)

Query: 313  NERFLRVNHSQTALVLGGTVSSGLPPDLLVY------------RSKVPMPL-QEETVNIL 359
            N+ +L ++ + T+++  G+ +S +P  +  +             S VP+ L  E     +
Sbjct: 591  NQIYL-IDKNTTSIIQEGSSNSMVPSKIESFYWRGGDQEESKDNSMVPLELIYENEFKTI 649

Query: 360  ASVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSER 419
              ++SP L     +      +LL+G  G GKRT++  VA+++G+HV E  C+ L    E 
Sbjct: 650  VDLISPFLMGDKFSFDFNCTLLLNGPQGVGKRTLLNRVAKQMGIHVYEVDCYKLYDFVES 709

Query: 420  KTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPV 479
            K    +      A   +PT+L+L++F+V +              +S  + ++++++ +  
Sbjct: 710  KKDWNIRNVLEQASNSTPTLLILKNFEVLEQTAQSMQQEKKESNLSQTLINILKDIND-- 767

Query: 480  SNGDXXXXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDE 539
            SN                       + +++  +  S + +S  +R  F HEI + S ++ 
Sbjct: 768  SNTSNINSNK---------------YPLIITVTVNSMDELSNKVRNWFKHEITLNSPDEN 812

Query: 540  QRSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETK 599
            QR ++L    + +   ++I +   +K L  +T+ FL  +L+AL+  +  N      S  +
Sbjct: 813  QRFKILKYLTKNLP--IDIGNTVSIKNLSIRTASFLNSNLRALIQRSSINALKRVLSIQQ 870

Query: 600  KINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDD 659
             +N   D++  ++I+           L   +D  K+L   ++  +S++GAPK+PNV WDD
Sbjct: 871  MMN---DEIKPIEIYNCG-------FLVMGDDIQKSLSEMQEYQSSSIGAPKIPNVSWDD 920

Query: 660  VGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNF 719
            VGGL +VK+ I+DT+QLPL H  LF+SG+ KRSG+LL+GPPGTGKTLLAKA+ATECSLNF
Sbjct: 921  VGGLANVKSEIMDTIQLPLEHPHLFASGIGKRSGILLFGPPGTGKTLLAKAIATECSLNF 980

Query: 720  LSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRV 779
            LSVKGPELINMYIGESEKN+R+IF KAR A+PCVIFFDELDSLAP+RG   DSGGVMDRV
Sbjct: 981  LSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGNGADSGGVMDRV 1040

Query: 780  VSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLK 839
            VSQ+LAE+DG+  SS D+FIIGA+NRPDL+D +L+RPGR D+LLY+G++++   + ++L+
Sbjct: 1041 VSQLLAELDGMQKSS-DVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQ 1099

Query: 840  ALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDD 899
            ALTRKF L++DV L  V + CP   TGAD YAL +DA   A   +++ S +G++  EE+ 
Sbjct: 1100 ALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFHERITASINGEI-NEEEQ 1158

Query: 900  PDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQFQGRS 940
               ++V    FIKA++ L PS+S+ EL+ Y  ++ QF G +
Sbjct: 1159 NQKLIVYQNHFIKAVNSLVPSVSLDELEYYHKVQKQFSGNN 1199



>gi|156405290|ref|XP_001640665.1| predicted protein [Nematostella vectensis]
 gi|156227800|gb|EDO48602.1| predicted protein [Nematostella vectensis]
          Length = 675

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 298/734 (40%), Positives = 415/734 (56%), Gaps = 75/734 (10%)

Query: 219 YASHLRVSFVKIPECGTIPSLKVNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRIYI 278
           +AS + +S V        P++K   SF A         AL ++F T R L+ GD+  I  
Sbjct: 2   FASEVVLSLV------VTPNIKKEESFNA---------ALVRHFTTPRLLTTGDVVGIIC 46

Query: 279 DWNCGSSICNPCSQRLCSESDDYIYFKVIAMEPSN--ERFLRVNHSQTALVLGGTVSSGL 336
            W    S  N             +YFKV  +  S+     L V+   T+L   G V S +
Sbjct: 47  YWKDDPSDSND------EHRSRVVYFKVTKLVSSSFENETLFVDTEHTSLYQKGFVHSFV 100

Query: 337 P----PDLLV---YRSKVPMPLQEETVNILASVLSPPLCPSALASKLRVAVLLHGIPGCG 389
           P    P L     Y+S + +P  + +   L  ++ P L          V VLL G+PG G
Sbjct: 101 PVLMEPVLQGVNHYKSSLIVPGHKTSQEKLEKIIRPYLSKRVNGPPF-VQVLLTGLPGTG 159

Query: 390 KRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVFK 449
           KR +   V+ +L L V E SC  L+  S   T T +   F  A    P ILLLRH     
Sbjct: 160 KRAICMAVSSQLNLAVQEISCFDLIGDSVAATETRIKNLFVRANDCRPCILLLRHIHAIG 219

Query: 450 NLGSQDGSLGDRVGVSFE--IASVIRELTEPVSNGDXXXXXXXXXXXXXXXVGKFRGHQV 507
                     D+ G   E  IA+ +++ TE + +                         +
Sbjct: 220 K---------DKEGQEDEPRIAATLQDCTEFIKDQSD--------------------WPL 250

Query: 508 LLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGL 567
           ++IA++   + I   I   F HEI++ S ++++R  ML    QG+S   +++ D   + L
Sbjct: 251 VVIATSSQPDSICSGIYASFLHEIKLESPSEQERLCML----QGISSVYSLAPDVNFEVL 306

Query: 568 VGQTSGFLPRDLQALVADAG--ANLYISQESETK-KINSLSDDLHGV-DIHQASQIDNST 623
             +T+GF+  D  AL   A   A+  ++Q    K  +N+ ++D   +  I Q  +    +
Sbjct: 307 ARRTAGFVLADFAALFTRATSIASARVTQYLTAKLHLNTKTEDPSQLFTIQQCIKSACRS 366

Query: 624 EKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDL 683
                 +DF +ALD  +  +A A+GAPK+P++ W DVGGL+ VK  ILDT+QLPLLH +L
Sbjct: 367 GVSINFKDFQEALDALQASHADAIGAPKIPDISWKDVGGLDSVKEEILDTIQLPLLHPEL 426

Query: 684 FSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIF 743
           F++GLR RSGVLLYGPPGTGKTL+AKAVATECSLNFLSVKGPELINMY+G+SE+NVR++F
Sbjct: 427 FAAGLR-RSGVLLYGPPGTGKTLMAKAVATECSLNFLSVKGPELINMYVGQSEQNVREVF 485

Query: 744 EKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGAS 803
            +A++A PCVIFFDELDSLAP RG SGDSGGVMDRVV+Q+LAE+DGL  S+ D+F+IGA+
Sbjct: 486 SRAQAASPCVIFFDELDSLAPNRGRSGDSGGVMDRVVAQLLAELDGLH-STCDVFVIGAT 544

Query: 804 NRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPST 863
           NRPDL+DPALLRPGRFDKLLY+GV+ D   +  VLKALTRKF  S D  L   A K P  
Sbjct: 545 NRPDLLDPALLRPGRFDKLLYLGVSKDHHAQLSVLKALTRKFTFSADFRLEEFANKLPLN 604

Query: 864 FTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPSLSI 923
            TGAD+YA+ +DA  QA +R + ++  G+    ED    V +   DF  A+  L+PS+S 
Sbjct: 605 LTGADLYAMASDALLQAMRRIIQET-GGNADAAEDAVIEVCL--ADFCVALQNLTPSVSF 661

Query: 924 TELKKYEMLRDQFQ 937
            EL++Y+ +++  +
Sbjct: 662 QELERYKQIKNTLE 675



>gi|393291|gb|AAA16622.1| ATPase
          Length = 1025

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 279/733 (38%), Positives = 417/733 (56%), Gaps = 93/733 (12%)

Query: 256  SALQKYFG-TDRQLSRGDIFRIYIDWNCGSSICNPCS------QRLCSESDDYIYFKVIA 308
            + LQ YF    R +  GD+  I  D     +I           + L  + D   +F+V +
Sbjct: 333  AGLQAYFKPVKRAVRVGDLIPIPFDSILARTIGEDPEMSHIPLEALAVKPDSVAWFQVTS 392

Query: 309  M----EPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEETVNILASVLS 364
            +    +P+++++L V+ SQT L+ GGT SS + P  + +R  + +    +T+    S  +
Sbjct: 393  LNGSEDPASKQYL-VDSSQTKLIEGGTTSSAVIPTSVPWREYLGL----DTLPKFGSEFA 447

Query: 365  --------PPLCPSALA-SKLRVAVLLHGIP-GCGKRTVVKYVARRLGLHVVEFSCHSLL 414
                      +  SAL+ +KL  +VLLH    G GK TV++ VA + G+ V E SC  L+
Sbjct: 448  YADKIRNLVQISTSALSHAKLNTSVLLHSAKRGVGKSTVLRSVAAQCGISVFEISCFGLI 507

Query: 415  ASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRE 474
              +E +T   L    + A   SP +++L+H +       QDG          +   ++ +
Sbjct: 508  GDNEAQTLGTLRAKLDRAYGCSPCVVVLQHLESIAKKSDQDG----------KDEGIVSK 557

Query: 475  LTEPVSNGDXXXXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMG 534
            L + +++                    + GH VLL A++   + IS  IR  F  EI +G
Sbjct: 558  LVDVLAD--------------------YSGHGVLLAATSNDPDKISEAIRSRFQFEIEIG 597

Query: 535  SLNDEQRSEM---LSQSLQGVSQFLN----ISSDEFMKGLVGQTSGFLPRDLQALVADAG 587
              ++ QR ++   L++S  G     N    + SD  ++ L  Q++G  P DL A+V    
Sbjct: 598  VPSEPQRRQIFSHLTKSGPGGDSIRNAPISLRSDVSVENLALQSAGLTPPDLTAIVQ--- 654

Query: 588  ANLYISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASAL 647
                 ++     ++N L+ +     +     + + T +LT   DF  A+  ++++ + ++
Sbjct: 655  ----TTRLRAIDRLNKLTKERPIATLDDLLTLSHGTLQLTP-SDFDDAIADARQKYSDSI 709

Query: 648  GAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLL 707
            GAP++PNV WDDVGG+E VK  ILDT++ PL +   FS G++KRSG+L YGPPGTGKTLL
Sbjct: 710  GAPRIPNVGWDDVGGMEGVKKDILDTIETPLKYPHWFSDGVKKRSGILFYGPPGTGKTLL 769

Query: 708  AKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARG 767
            AKA+AT  SLNF SVKGPEL+NMYIGESE NVR +F+KAR A+PCV+FFDELDS+AP R 
Sbjct: 770  AKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSVAPQRR 829

Query: 768  ASGDSGGVMDRVVSQMLAEIDGLSDS-SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVG 826
              GDSGGVMDR+VSQ+LAE+DG+S +  + +F++GA+NRPDL+D ALLRPGRFDK+LY+G
Sbjct: 830  NQGDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLG 889

Query: 827  VNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVS 886
            ++     ++ +++ALTRKF+L+ DVSL +++K+CP TFTGAD YALC+DA   A  R  +
Sbjct: 890  ISDTHEKQQTIMEALTRKFRLAADVSLEAISKRCPFTFTGADFYALCSDAMLNAMTRTAN 949

Query: 887  KSD------------SGDMPT-------EEDDPDSVVVEYV--DFIKAMDQLSPSLSITE 925
            + D            +G+ P         E     + VE    DF KA D+LSPS+S  E
Sbjct: 950  EVDAKIKLLNKNREEAGEEPVSIRWWFDHEATKSDIEVEVAQQDFEKAKDELSPSVSAEE 1009

Query: 926  LKKYEMLRDQFQG 938
            L+ Y  LR QF+G
Sbjct: 1010 LQHYLKLRQQFEG 1022



>gi|50549031|ref|XP_501986.1| YlPEX6 [Yarrowia lipolytica]
 gi|51704274|sp|P36966|PEX6_YARLI Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome biosynthesis
            protein PAY4)
 gi|49647853|emb|CAG82306.1| YlPEX6 [Yarrowia lipolytica CLIB122]
          Length = 1024

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 281/735 (38%), Positives = 417/735 (56%), Gaps = 98/735 (13%)

Query: 256  SALQKYFG-TDRQLSRGDIFRIYIDWNCGSSICNPCS------QRLCSESDDYIYFKVIA 308
            + LQ YF    R +  GD+  I  D     +I           + L  + D   +F+V +
Sbjct: 333  AGLQAYFKPVKRAVRVGDLIPIPFDSILARTIGEDPEMSHIPLEALAVKPDSVAWFQVTS 392

Query: 309  M----EPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRSKVPMPLQEETVNILASVLS 364
            +    +P+++++L V+ SQT L+ GGT SS + P  + +R  + +    +T+    S  +
Sbjct: 393  LNGSEDPASKQYL-VDSSQTKLIEGGTTSSAVIPTSVPWREYLGL----DTLPKFGSEFA 447

Query: 365  --------PPLCPSALA-SKLRVAVLLHGIP-GCGKRTVVKYVARRLGLHVVEFSCHSLL 414
                      +  SAL+ +KL  +VLLH    G GK TV++ VA + G+ V E SC  L+
Sbjct: 448  YADKIRNLVQISTSALSHAKLNTSVLLHSAKRGVGKSTVLRSVAAQCGISVFEISCFGLI 507

Query: 415  ASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRE 474
              +E +T   L    + A   SP +++L+H +       QDG          +   ++ +
Sbjct: 508  GDNEAQTLGTLRAKLDRAYGCSPCVVVLQHLESIAKKSDQDG----------KDEGIVSK 557

Query: 475  LTEPVSNGDXXXXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMG 534
            L + +++                    + GH VLL A++   + IS  IR  F  EI +G
Sbjct: 558  LVDVLAD--------------------YSGHGVLLAATSNDPDKISEAIRSRFQFEIEIG 597

Query: 535  SLNDEQRSEM---LSQSLQGVSQFLN----ISSDEFMKGLVGQTSGFLPRDLQALVADAG 587
              ++ QR ++   L++S  G     N    + SD  ++ L  Q++G  P DL A+V    
Sbjct: 598  VPSEPQRRQIFSHLTKSGPGGDSIRNAPISLRSDVSVENLALQSAGLTPPDLTAIV---- 653

Query: 588  ANLYISQESETKKINSLSD--DLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNAS 645
                  Q +  + I+ L+         +     + + T +LT   DF  A+  ++++ + 
Sbjct: 654  ------QTTRLRAIDRLNKLTKDSDTTLDDLLTLSHGTLQLTP-SDFDDAIADARQKYSD 706

Query: 646  ALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKT 705
            ++GAP++PNV WDDVGG+E VK  ILDT++ PL +   FS G++KRSG+L YGPPGTGKT
Sbjct: 707  SIGAPRIPNVGWDDVGGMEGVKKDILDTIETPLKYPHWFSDGVKKRSGILFYGPPGTGKT 766

Query: 706  LLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPA 765
            LLAKA+AT  SLNF SVKGPEL+NMYIGESE NVR +F+KAR A+PCV+FFDELDS+AP 
Sbjct: 767  LLAKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSVAPQ 826

Query: 766  RGASGDSGGVMDRVVSQMLAEIDGLSDS-SQDLFIIGASNRPDLIDPALLRPGRFDKLLY 824
            RG  GDSGGVMDR+VSQ+LAE+DG+S +  + +F++GA+NRPDL+D ALLRPGRFDK+LY
Sbjct: 827  RGNQGDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLY 886

Query: 825  VGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRK 884
            +G++     ++ +++ALTRKF+L+ DVSL +++K+CP TFTGAD YALC+DA   A  R 
Sbjct: 887  LGISDTHEKQQTIMEALTRKFRLAADVSLEAISKRCPFTFTGADFYALCSDAMLNAMTRT 946

Query: 885  VSKSD------------SGDMPT-------EEDDPDSVVVEYV--DFIKAMDQLSPSLSI 923
             ++ D            +G+ P         E     + VE    DF KA D+LSPS+S 
Sbjct: 947  ANEVDAKIKLLNKNREEAGEEPVSIRWWFDHEATKSDIEVEVAQQDFEKAKDELSPSVSA 1006

Query: 924  TELKKYEMLRDQFQG 938
             EL+ Y  LR QF+G
Sbjct: 1007 EELQHYLKLRQQFEG 1021



>gi|118087771|ref|XP_415006.2| PREDICTED: similar to Pxaaa1p [Gallus gallus]
          Length = 657

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 280/704 (39%), Positives = 403/704 (57%), Gaps = 77/704 (10%)

Query: 251 QGLIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNP---CSQRLCSESDDYI----- 302
           + + D  L ++F T R +  GD+            +C P   C++ L   +D ++     
Sbjct: 10  RAVYDRLLYRHFQTPRLVQEGDV------------LCVPTFGCAEFLDGNADKFLRWPEL 57

Query: 303 YFKVI----AMEPSNERFLRVNHSQTALVLGGTVSSGLPP-----DLLVYRSKVPMPLQE 353
           YFKV      +E         +   T+L L G+ +S +P          + S  P  L +
Sbjct: 58  YFKVRKVLGTVEGMQSEGYLADTQNTSLYLVGSTNSAVPSAPAYTSHEFWSSLSPAGLSD 117

Query: 354 ETVNILASVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSL 413
             V  +   L P L   A A     +VLL G  G GK   V+ V   L LH+ +  C SL
Sbjct: 118 -VVKEICDALRPHLTSQAAALSGAGSVLLSGPSGSGKTMAVRAVCSCLNLHLFKVDCVSL 176

Query: 414 LASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIR 473
              +   T   +   F  A++Y P +LLL+  +V        G   DR+G   E A VI 
Sbjct: 177 CGDTSAATEEKIHMAFAQAQQYHPCVLLLKDIEVL-------GRDRDRLG---EDARVIA 226

Query: 474 ELTEPVSNGDXXXXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRM 533
            L + + + D                     H VL+I +    + +   ++  F HE+++
Sbjct: 227 TLRQLLLDRDPAQSS----------------HPVLVIGTTCKPQDVPTDVQTAFLHEVKI 270

Query: 534 GSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYIS 593
            +L+++QR  MLS     ++  L +  +  +  L  +T+GF+  D  AL++        S
Sbjct: 271 EALSEDQRRAMLSM----LTASLPLGKEVSLAKLARRTAGFVLGDFCALLSH-------S 319

Query: 594 QESETKKINSLSDDLHGVDIHQASQIDNSTEKLTA-KEDFTKALDRSKKRNASALGAPKV 652
             +   +I +LS       +++  + D  T      +EDF  ALD+    ++ A+GAPK+
Sbjct: 320 SRAACTRIQALS---FPGGLNEEVERDFCTAGFPVLEEDFNVALDQLHDAHSQAVGAPKI 376

Query: 653 PNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVA 712
           P+V W DVGGL +VK  ILDT+QLPL H +L S GL  RSG+LLYGPPGTGKTLLAKAVA
Sbjct: 377 PSVSWQDVGGLHEVKKEILDTIQLPLEHPELLSLGL-CRSGLLLYGPPGTGKTLLAKAVA 435

Query: 713 TECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDS 772
           T C++ FLSVKGPELINMY+G+SE+NVR++F +AR+A PC+IFFDELDSLAP RG SGDS
Sbjct: 436 TTCTMTFLSVKGPELINMYVGQSEENVRNVFARARAAAPCIIFFDELDSLAPNRGRSGDS 495

Query: 773 GGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADAS 832
           GGVMDRVVSQ+LAE+DGL  SS+++F+IGA+NRPDL+DPALLRPGRFDKL+YVGVN D  
Sbjct: 496 GGVMDRVVSQLLAELDGLH-SSREVFVIGATNRPDLLDPALLRPGRFDKLVYVGVNEDRE 554

Query: 833 YRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGD 892
            + +VL A+TRKFKL   V+L S+ ++CP+  TGAD+Y+LC+DA   A KRKV   + G 
Sbjct: 555 SQLQVLSAVTRKFKLDPSVNLSSILEECPAQLTGADIYSLCSDAMMCAVKRKVEWIEEG- 613

Query: 893 MPTEEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQF 936
           + TE     ++++   DF++A  +L PS+S  EL +Y++++ +F
Sbjct: 614 LDTES---SALILTMEDFLQAAARLQPSVSEQELLRYKLIQQKF 654



>gi|169853750|ref|XP_001833553.1| hypothetical protein CC1G_11759 [Coprinopsis cinerea okayama7#130]
 gi|116505386|gb|EAU88281.1| hypothetical protein CC1G_11759 [Coprinopsis cinerea okayama7#130]
          Length = 1105

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 245/598 (40%), Positives = 348/598 (58%), Gaps = 74/598 (12%)

Query: 371  ALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFN 430
            +L   L +  L+ G  G GK T + +VA++LG+H++E  C+ L+  ++ KT   L   F+
Sbjct: 545  SLDCHLDLTFLIKGQRGVGKYTTISWVAQKLGIHIMELDCYDLIGENDTKTEGTLRVRFD 604

Query: 431  MARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDXXXXXXX 490
             A + SP I++LR  + F       GS     G    +++V++E    +           
Sbjct: 605  QATQCSPCIIVLRKLEAFA------GSTQPAQGKESPLSAVLQECVGNLQKS-------- 650

Query: 491  XXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQ 550
                      K  G  V+++ +   +  + P+I   F HEI +   ++  R E+L+  L 
Sbjct: 651  ---------WKETGFPVIVVGTVTESGQVPPSILSQFKHEINIEVPDERSRYEILASLLH 701

Query: 551  GVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHG 610
                   +SSD  +  L  QT+  +  DL  LVA A  +  + +  + K ++  S  L G
Sbjct: 702  TAV----LSSDVSLSHLATQTAALVAADLVDLVARAHTH-SLERTLKNKGLSKQSVQLAG 756

Query: 611  VDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSI 670
            V +  A              DF  AL +++   + ++GAPK+P V WDDVGGL  VK  I
Sbjct: 757  VSLSAA--------------DFESALGKARDAYSESIGAPKIPTVSWDDVGGLAHVKADI 802

Query: 671  LDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINM 730
            LDT+QLPL H +LF+ GL+KRSG+LLYGPPGTGKTL+AKAVAT CSLNF SVKGPEL+NM
Sbjct: 803  LDTIQLPLEHPELFADGLKKRSGILLYGPPGTGKTLIAKAVATSCSLNFFSVKGPELLNM 862

Query: 731  YIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGL 790
            YIGESE NVR +F+KAR A+PCVIFFDELDS+AP RG  GDSGGVMDR+VSQ+LAE+DG+
Sbjct: 863  YIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGM 922

Query: 791  SDS---SQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKL 847
            + S   S D+F+IGA+NRPDL+DPALLRPGRFD++LY+GV+     +  +L+ALTRKF+L
Sbjct: 923  AGSENGSSDVFVIGATNRPDLLDPALLRPGRFDRMLYLGVSDTHEAQFNILEALTRKFRL 982

Query: 848  SEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDD-------- 899
              D++L  +A++CP  +TGAD YALC+DA   A  RK +  D       E D        
Sbjct: 983  DPDLNLRDIAEQCPFNYTGADFYALCSDAMLNAMSRKAALIDKRISEITESDLAALSSTS 1042

Query: 900  -------------------PDSVVVEYV--DFIKAMDQLSPSLSITELKKYEMLRDQF 936
                               P+ ++V     DF+ A+  L PS+S  E++ Y +++ +F
Sbjct: 1043 GVKHPYPLTPQYYLSELATPEEILVTVTKEDFMIALKNLVPSVSEAEMEHYRLVQQRF 1100



>gi|2911135|dbj|BAA24931.1| peroxisome assembly factor-2 [Rattus norvegicus]
          Length = 978

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 299/758 (39%), Positives = 414/758 (54%), Gaps = 103/758 (13%)

Query: 202 DGSKIGLDLEPVSQVPG--YASHLRVSFVKIPECGTIPSLKVNSSFEAEERQGLIDSALQ 259
           +GS    D    S +PG  +A  L +  +  P CG                 G  D  L 
Sbjct: 298 EGSTAAEDKGSCSLLPGPPFARELHIEVLPSPHCGA---------------NGKYDHVLY 342

Query: 260 KYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQRLCSESDDYIYFKV---IAMEPSN--E 314
           ++F T R +  GD+  +         I     +RL    +  ++FKV   +   P     
Sbjct: 343 RHFHTPRVVQEGDVLCVSTAGQV--EILEGSLERLPRWRE--VFFKVKKTVGEAPDGPAS 398

Query: 315 RFLRVNHSQTALVLGGTVSSGLPPDLLVYRS----KVPMPLQEETVNILASVLSPPLCPS 370
            FL  + + T+L L GT  S +PP L   RS     +  P  E  VN L +VL P L P 
Sbjct: 399 AFL-ADTTHTSLYLAGTTLSRVPP-LPSGRSPPWDSLSPPGLEALVNELCAVLKPHLQPG 456

Query: 371 ALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFN 430
                    VLL G PG GK T V     RLGLH+++  C SL A S R   T L  TF+
Sbjct: 457 GTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFS 516

Query: 431 MARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIREL---TEPVSNGDXXXX 487
            ARR  P +LLL             G   D +G    + + +R L    +P+S       
Sbjct: 517 RARRCRPVVLLLT-------ALDLLGRDRDGLGEDACVVATLRHLLLDEDPLS------- 562

Query: 488 XXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQ 547
                          R   ++++A+    + +   +R  F HE+ +  L++ QR  +L  
Sbjct: 563 ---------------RCPPLMVVATTSRVQDLPTDVRTAFPHELEVPVLSESQRLSVL-- 605

Query: 548 SLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADA---------GANLYISQESET 598
             Q ++  L +  +  +  L  + +GF+  DL AL+  A          A L +S+E E 
Sbjct: 606 --QALTAHLPLGQEVNLSQLARRCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEEDE- 662

Query: 599 KKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWD 658
                              ++  +   L A EDF +ALD+ +  ++ A+GAPK+P+V W 
Sbjct: 663 ------------------GELCAAGFPLLA-EDFGQALDQLQTAHSQAVGAPKIPSVSWH 703

Query: 659 DVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLN 718
           DVGGL+DVK  IL+T+QLPL H +L  S   +RSG+LL+GPPGTGKTLLAKAVATECSL 
Sbjct: 704 DVGGLQDVKKEILETIQLPLEHPEL-LSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLT 762

Query: 719 FLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDR 778
           FLSVKGPELINMY+G+SE+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDR
Sbjct: 763 FLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDR 822

Query: 779 VVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVL 838
           VVSQ+LAE+DGL  S+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VG + D + + RVL
Sbjct: 823 VVSQLLAELDGLH-STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVL 881

Query: 839 KALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEED 898
            A+TRKFKL   VSL +V   CP   TGAD+Y+LC+DA   A KR+V   + G  P    
Sbjct: 882 SAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLEPRSS- 940

Query: 899 DPDSVVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQF 936
              ++++   D ++A  +L PS+S  EL +Y+ ++ +F
Sbjct: 941 ---ALLLTMEDLLQAAARLQPSVSEQELLRYKRIQRKF 975



>gi|16923976|ref|NP_476466.1| peroxisomal biogenesis factor 6 [Rattus norvegicus]
 gi|1709557|sp|P54777|PEX6_RAT Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type ATPase 1)
           (Peroxin-6) (Peroxisomal biogenesis factor 6)
 gi|1127034|dbj|BAA09824.1| peroxisome assembly factor-2 [Rattus norvegicus]
 gi|149069412|gb|EDM18853.1| rCG43513 [Rattus norvegicus]
 gi|1586820|prf||2204387A peroxisome assembly factor 2
          Length = 978

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 294/741 (39%), Positives = 407/741 (54%), Gaps = 101/741 (13%)

Query: 217 PGYASHLRVSFVKIPECGTIPSLKVNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRI 276
           P +A  L +  +  P CG                 G  D  L ++F T R +  GD+  +
Sbjct: 315 PPFARELHIEVLPSPHCGV---------------NGKYDHVLYQHFHTPRVVQEGDVLCV 359

Query: 277 YIDWNCGSSICNPCSQRLCSESDDYIYFKV---IAMEPSN--ERFLRVNHSQTALVLGGT 331
                    I     +RL    +  ++FKV   +   P      FL  + + T+L L GT
Sbjct: 360 STAGQV--EILEGSLERLPRWRE--VFFKVKKTVGEAPDGPASAFL-ADTTHTSLYLAGT 414

Query: 332 VSSGLPPDLLVYRS----KVPMPLQEETVNILASVLSPPLCPSALASKLRVAVLLHGIPG 387
             S +PP L   RS     +  P  E  VN L +VL P L P          VLL G PG
Sbjct: 415 TLSRVPP-LPSGRSPPWDSLSPPGLEALVNELCAVLKPHLQPGGTLLTGTSCVLLQGPPG 473

Query: 388 CGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDV 447
            GK T V     RLGLH+++  C SL A S R   T L  TF+ ARR  P +LLL     
Sbjct: 474 SGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLT---- 529

Query: 448 FKNLGSQDGSLGDRVGVSFEIASVIREL---TEPVSNGDXXXXXXXXXXXXXXXVGKFRG 504
                   G   D +G    + + +R L    +P+S                      R 
Sbjct: 530 ---ALDLLGRDRDGLGEDARVVATLRHLLLDEDPLS----------------------RC 564

Query: 505 HQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFM 564
             ++++A+    + +   +R  F HE+ +  L++ QR  +L    Q ++  L +  +  +
Sbjct: 565 PPLMVVATTSRVQDLPTDVRTAFPHELEVPVLSESQRLSVL----QALTAHLPLGQEVNL 620

Query: 565 KGLVGQTSGFLPRDLQALVADA---------GANLYISQESETKKINSLSDDLHGVDIHQ 615
             L  + +GF+  DL AL+  A          A L +S+E E                  
Sbjct: 621 SQLARRCAGFVVGDLYALLTHASRAACTRIKAAGLAMSEEDE------------------ 662

Query: 616 ASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQ 675
             ++  +   L A EDF +ALD+ +  ++ A+GAPK+P+V W DVGGL+DVK  IL+T+Q
Sbjct: 663 -GELCAAGFPLLA-EDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQ 720

Query: 676 LPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGES 735
           LPL H +L  S   +RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+S
Sbjct: 721 LPLEHPEL-LSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQS 779

Query: 736 EKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQ 795
           E+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL  S+Q
Sbjct: 780 EENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQ 838

Query: 796 DLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYS 855
           D+F+IGA+NRPDL+DPALLRPGRFDKL++VG + D + + RVL A+TRKFKL   VSL +
Sbjct: 839 DVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMN 898

Query: 856 VAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMD 915
           V   CP   TGAD+Y+LC+DA   A KR+V   + G  P       ++++   D ++A  
Sbjct: 899 VLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEGLEPRSS----ALLLTMEDLLQAAA 954

Query: 916 QLSPSLSITELKKYEMLRDQF 936
           +L PS+S  EL +Y+ ++ +F
Sbjct: 955 RLQPSVSEQELLRYKRIQRKF 975



>gi|21703962|ref|NP_663463.1| peroxisomal biogenesis factor 6 [Mus musculus]
 gi|51701839|sp|Q99LC9|PEX6_MOUSE Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type ATPase 1)
           (Peroxin-6) (Peroxisomal biogenesis factor 6)
 gi|13097351|gb|AAH03424.1| Peroxisomal biogenesis factor 6 [Mus musculus]
 gi|148691586|gb|EDL23533.1| peroxisomal biogenesis factor 6 [Mus musculus]
 gi|159571857|emb|CAP19366.1| peroxisomal biogenesis factor 6 [Mus musculus]
          Length = 981

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 283/694 (40%), Positives = 398/694 (57%), Gaps = 60/694 (8%)

Query: 252 GLIDSALQKYFGTDRQLSRGDIFRIYIDWNCGSSICNPCSQRLCSESDDYIYFKVI---- 307
           G  D  L ++F T R +  GD+  +         I     +RL    +  ++FKV     
Sbjct: 336 GNYDHVLYRHFQTPRVVQEGDVLCVSTAGQV--EILEGSLERLPRWRE--MFFKVKKTVG 391

Query: 308 -AMEPSNERFLRVNHSQTALVLGGTVSSGLPPDLLVYRS----KVPMPLQEETVNILASV 362
            A E     FL  + + T+L L GT  S +P  L   RS     +  P  E  VN L ++
Sbjct: 392 EAPEGPASAFL-ADTTHTSLYLAGTALSHVP-SLPSGRSPPWDSLSPPGLEALVNELCAI 449

Query: 363 LSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTS 422
           L P L P          VLL G PG GK T V     RLGLH+++  C SL A S R   
Sbjct: 450 LKPHLQPGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVE 509

Query: 423 TALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNG 482
           T L  TF+ ARR  P +LLL   D+        G   D +G    +A+ +R L   + + 
Sbjct: 510 TKLQATFSRARRCRPAVLLLTAVDLL-------GRDRDGLGEDARVAATLRHL---LLDE 559

Query: 483 DXXXXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRS 542
           D                   R   ++++A+    + +   ++  F HE+ +  L++ QR 
Sbjct: 560 DALS----------------RCPPLMVVATTSRVQDLPTDVQTAFPHELEVPVLSEAQRL 603

Query: 543 EMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKIN 602
            +L    Q ++  L +  +  +  L  + +GF+  DL AL+         +  +   +I 
Sbjct: 604 SIL----QALTAHLPLGQEVNLPQLARRCAGFVVGDLYALLTH-------TCRAACTRIR 652

Query: 603 SLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGG 662
           + S    G+       +  +   L A EDF +ALD+ +  ++ A+GAP++P+V W DVGG
Sbjct: 653 A-SGSAGGLSEEDEGDLCVAGFPLLA-EDFGQALDQLQTAHSQAVGAPRIPSVSWHDVGG 710

Query: 663 LEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSV 722
           L+DVK  IL+T+QLPL H +L  S   +RSG+LL+GPPGTGKTLLAKAVATECSL FLSV
Sbjct: 711 LQDVKKEILETIQLPLEHPEL-LSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSV 769

Query: 723 KGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQ 782
           KGPELINMY+G+SE+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ
Sbjct: 770 KGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQ 829

Query: 783 MLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALT 842
           +LAE+DGL  S+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VG + D + + RVL A+T
Sbjct: 830 LLAELDGLH-STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAIT 888

Query: 843 RKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDS 902
           RKFKL   VSL +V   CP   TGAD+Y+LC+DA   A KR+V   + G     E    +
Sbjct: 889 RKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRRVRDLEEG----LELRSSA 944

Query: 903 VVVEYVDFIKAMDQLSPSLSITELKKYEMLRDQF 936
           +++   D ++A  +L PS+S  EL +Y+ ++ +F
Sbjct: 945 LLLTMEDLLQAAARLQPSVSEQELLRYKRIQRKF 978



>gi|71013254|ref|XP_758568.1| hypothetical protein UM02421.1 [Ustilago maydis 521]
 gi|46098226|gb|EAK83459.1| hypothetical protein UM02421.1 [Ustilago maydis 521]
          Length = 1293

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 251/626 (40%), Positives = 362/626 (57%), Gaps = 72/626 (11%)

Query: 348  PMPLQEETVNILASVLSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVE 407
            P+         L+S+L+  L  +A    L ++VLL G  GCGK+TV ++VA+  G+ +VE
Sbjct: 625  PLMAPSSAYATLSSLLTATLQSNASRFGLHLSVLLKGARGCGKKTVARWVAKAAGVQLVE 684

Query: 408  FSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFE 467
              C  +++ ++ +T   L   F  A   +P I LLR+ +      SQ    G    ++  
Sbjct: 685  LDCFDVISDTDVRTEGVLRARFQKAAECAPCIFLLRNIEALAR-KSQALETGQEPPLATA 743

Query: 468  IASVIREL---TEPVSNGDXXXXXXXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIR 524
            + +   EL   T+P   G                        V +  +    +     + 
Sbjct: 744  LQNCFEELWSVTKPQEGGQVVM-------------------PVAVFGTTSDPDKCPSGVL 784

Query: 525  RCFSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVA 584
             CF HE+   + N+ +R  ML  +++       +  D  +K L  QT+  +  DL  L A
Sbjct: 785  GCFKHEVTFNAPNEAERRAMLEIAMRDSI----LGPDVDLKNLATQTAALVAADLVNL-A 839

Query: 585  DAGANLYISQESETKKIN--SLSDD---LHGVDIHQASQIDNSTEKLTAKEDFTKALDRS 639
                 + +S+  +T  ++  ++SD    L G+ I  A              D  +AL+++
Sbjct: 840  SRSRLMSVSRVRKTLPVSASTISDRDLFLAGLAITGA--------------DVDQALNKA 885

Query: 640  KKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGP 699
            +   + ++GAPK+PNV WDDVGGL  VK+ ILDT+QLPL H +LFS GL+KRSG+LLYGP
Sbjct: 886  RSSYSESIGAPKIPNVTWDDVGGLASVKSDILDTIQLPLEHPELFSDGLKKRSGILLYGP 945

Query: 700  PGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDEL 759
            PGTGKTLLAKAVAT CSLNF SVKGPEL+NMYIGESE NVR +F++AR A+PCVIFFDEL
Sbjct: 946  PGTGKTLLAKAVATSCSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDEL 1005

Query: 760  DSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQ--DLFIIGASNRPDLIDPALLRPG 817
            DS+AP RG  GDSGGVMDR+VSQ+LAE+DG++ SS+  D+F+IGA+NRPDL+DPALLRPG
Sbjct: 1006 DSVAPKRGNQGDSGGVMDRIVSQLLAELDGMAGSSEGTDVFVIGATNRPDLLDPALLRPG 1065

Query: 818  RFDKLLYVGVNADASYRERVLKALTRKFKLSEDV-SLYSVAKKCPSTFTGADMYALCADA 876
            RFD++LY+ V+   + +  +L+ALTRKFKL  DV  L  +A++CP   TGAD YALC+DA
Sbjct: 1066 RFDRMLYLSVSETHAAQLNILQALTRKFKLDADVGDLSVIAEQCPFNLTGADFYALCSDA 1125

Query: 877  WFQAAKRKVSKSDS-----GDMPTEEDDPDSVVVEYV-----------------DFIKAM 914
              +A  RK S+ D+      + P +++ P  +  +Y                  DF  A+
Sbjct: 1126 MLKAMTRKASEVDAKIQEINETPGKKNHPYPLTAQYYLAEMATAEEVEVKVGKGDFEAAL 1185

Query: 915  DQLSPSLSITELKKYEMLRDQFQGRS 940
             +L+PS+S  E++ Y  ++ +F   S
Sbjct: 1186 RELTPSVSEQEMQHYREVQAKFSSPS 1211



>gi|109071184|ref|XP_001089644.1| PREDICTED: peroxisomal biogenesis factor 6 isoform 5 [Macaca
           mulatta]
          Length = 980

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 282/726 (38%), Positives = 401/726 (55%), Gaps = 69/726 (9%)

Query: 217 PGYASHLRVSFVKIPECGTIPSLKVNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRI 276
           P +A  L +  V  P   T                G  D  L ++F   R +  GD+  +
Sbjct: 315 PPFARELYIEIVSSPHYST---------------NGNYDGVLYRHFQIPRVVQEGDVLCV 359

Query: 277 YIDWNCGSSICNPCSQRLCSESDDYIYFKVIAME----PSNERFLRVNHSQTALVLGGTV 332
                    I     ++L    + +   K  A E    P++       H+   +V G T+
Sbjct: 360 PTIGQV--EILEGSPEKLPRWREMFFKVKKTAGEAPDGPASAYLADTTHTSLYMV-GSTL 416

Query: 333 SS--GLPPDLLVYRSKVPMPLQEETVNILASVLSPPLCPSALASKLRVAVLLHGIPGCGK 390
           S    LP +     S +  P  E  V+ L +VL P L P         +VLL G PGCGK
Sbjct: 417 SPVPWLPSEKSTLWSSLSPPGLEALVSELCAVLKPRLQPGGALLTGSSSVLLRGPPGCGK 476

Query: 391 RTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKN 450
            TVV     +LGLH+++  C SL A S     T L   F+ ARR  P +LLL   D+   
Sbjct: 477 TTVVAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRARRCRPAVLLLTAVDL--- 533

Query: 451 LGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDXXXXXXXXXXXXXXXVGKFRGHQVLLI 510
           LG     LG       E A V+  L   + + D                       ++++
Sbjct: 534 LGRDRDGLG-------EDARVVAALRHLLLDEDPLNSCP----------------PLMVV 570

Query: 511 ASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQ 570
           A+    + +   ++  F HE+ + +L++ QR  +L    + ++  L +  +  +  L  +
Sbjct: 571 ATTSRAQDLPADVQTAFPHELEVPALSEGQRLSIL----RALTAHLPLGQEVNLAQLARR 626

Query: 571 TSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKE 630
            +GF+  DL AL+         S  +   +I +L     G+      ++  +   L A E
Sbjct: 627 CAGFVVGDLYALLTH-------SSRAACTRIKNLGL-AGGLTEEDEGELCAAGFPLLA-E 677

Query: 631 DFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRK 690
           DF +AL+  +  ++ A+GAPK+P+V W DVGGL++VK  IL+T+QLPL H +L  S   +
Sbjct: 678 DFGQALELQQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPEL-LSLGLR 736

Query: 691 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSAR 750
           RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+SE+NVR++F +AR+A 
Sbjct: 737 RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAA 796

Query: 751 PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLID 810
           PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL  S+QD+F+IGA+NRPDL+D
Sbjct: 797 PCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIGATNRPDLLD 855

Query: 811 PALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMY 870
           PALLRPGRFDKL++VG N D + + RVL A+TRKFKL   VSL +V   CP   TGAD+Y
Sbjct: 856 PALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLY 915

Query: 871 ALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYE 930
           +LC+DA   A KR+V   + G  P       ++++   D ++A  +L PS+S  EL +Y+
Sbjct: 916 SLCSDAMTAALKRRVHDLEEGLEPGSS----ALMLTMEDLLQAAARLQPSVSEQELLRYK 971

Query: 931 MLRDQF 936
            ++ +F
Sbjct: 972 RIQHKF 977



>gi|1354753|gb|AAC50655.1| Pxaaa1p
          Length = 980

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 266/629 (42%), Positives = 377/629 (59%), Gaps = 50/629 (7%)

Query: 311 PSNERFLRVNHSQTALVLGGTVSS--GLPPDLLVYRSKVPMPLQEETVNILASVLSPPLC 368
           P++       H+   +V G T+S    LP +     S +  P  E  V+ L +VL P L 
Sbjct: 396 PASAYLADTTHTSLYMV-GSTLSPVPWLPSEESTLWSSLSPPGLEALVSELCAVLKPRLQ 454

Query: 369 PSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQT 428
           P         +VLL G PGCGK TVV      LGLH+++  C SL A S     T L   
Sbjct: 455 PGGALLTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAI 514

Query: 429 FNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDXXXXX 488
           F+ ARR  P +LLL   D+        G   D +G    + +V+R L   + N D     
Sbjct: 515 FSRARRCRPAVLLLTAVDLL-------GRDRDGLGEDARVMAVLRHL---LLNEDPLNSC 564

Query: 489 XXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQS 548
                             ++++A+    + +   ++  F HE+ + +L++ QR  +L   
Sbjct: 565 P----------------PLMVVATTSRAQDLPADVQTAFPHELEVPALSEGQRLSIL--- 605

Query: 549 LQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINS-LSDD 607
            + ++  L +  +  +  L  + +GF+  DL AL+  +      S+ + T+  NS L+  
Sbjct: 606 -RALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHS------SRAACTRIKNSGLAGG 658

Query: 608 LHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVK 667
           L   D     ++  +   L A EDF +AL++ +  ++ A+GAPK+P+V W DVGGL++VK
Sbjct: 659 LTEED---EGELCAAGFPLLA-EDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGLQEVK 714

Query: 668 TSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 727
             IL+T+QLPL H +L  S   +RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPEL
Sbjct: 715 KEILETIQLPLEHPEL-LSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPEL 773

Query: 728 INMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEI 787
           INMY+G+SE+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+
Sbjct: 774 INMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAEL 833

Query: 788 DGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKL 847
           DGL  S+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VG N D + + RVL A+TRKFKL
Sbjct: 834 DGLH-STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKL 892

Query: 848 SEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEY 907
              VSL +V   CP   TGAD+Y+LC+DA   A KR+V   + G  P       ++++  
Sbjct: 893 EPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPGSS----ALMLTM 948

Query: 908 VDFIKAMDQLSPSLSITELKKYEMLRDQF 936
            D ++A  +L PS+S  EL +Y+ ++ +F
Sbjct: 949 EDLLQAAARLQPSVSEQELLRYKRIQRKF 977



>gi|12644408|sp|Q13608|PEX6_HUMAN Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type ATPase 1)
           (Peroxin-6) (Peroxisomal biogenesis factor 6)
 gi|1747316|dbj|BAA12069.1| peroxisome assembly factor-2 [Homo sapiens]
 gi|7453117|gb|AAF62564.1| peroxisome assembly factor-2 [Homo sapiens]
 gi|29477006|gb|AAH48331.1| Peroxisomal biogenesis factor 6 [Homo sapiens]
 gi|56204676|emb|CAI19463.1| peroxisomal biogenesis factor 6 [Homo sapiens]
 gi|119624530|gb|EAX04125.1| peroxisomal biogenesis factor 6, isoform CRA_a [Homo sapiens]
 gi|119624532|gb|EAX04127.1| peroxisomal biogenesis factor 6, isoform CRA_a [Homo sapiens]
          Length = 980

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 266/629 (42%), Positives = 377/629 (59%), Gaps = 50/629 (7%)

Query: 311 PSNERFLRVNHSQTALVLGGTVSS--GLPPDLLVYRSKVPMPLQEETVNILASVLSPPLC 368
           P++       H+   +V G T+S    LP +     S +  P  E  V+ L +VL P L 
Sbjct: 396 PASAYLADTTHTSLYMV-GSTLSPVPWLPSEESTLWSSLSPPGLEALVSELCAVLKPRLQ 454

Query: 369 PSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQT 428
           P         +VLL G PGCGK TVV      LGLH+++  C SL A S     T L   
Sbjct: 455 PGGALLTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAI 514

Query: 429 FNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDXXXXX 488
           F+ ARR  P +LLL   D+        G   D +G    + +V+R L   + N D     
Sbjct: 515 FSRARRCRPAVLLLTAVDLL-------GRDRDGLGEDARVMAVLRHL---LLNEDPLNSC 564

Query: 489 XXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQS 548
                             ++++A+    + +   ++  F HE+ + +L++ QR  +L   
Sbjct: 565 P----------------PLMVVATTSRAQDLPADVQTAFPHELEVPALSEGQRLSIL--- 605

Query: 549 LQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINS-LSDD 607
            + ++  L +  +  +  L  + +GF+  DL AL+  +      S+ + T+  NS L+  
Sbjct: 606 -RALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHS------SRAACTRIKNSGLAGG 658

Query: 608 LHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVK 667
           L   D     ++  +   L A EDF +AL++ +  ++ A+GAPK+P+V W DVGGL++VK
Sbjct: 659 LTEED---EGELCAAGFPLLA-EDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGLQEVK 714

Query: 668 TSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 727
             IL+T+QLPL H +L  S   +RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPEL
Sbjct: 715 KEILETIQLPLEHPEL-LSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPEL 773

Query: 728 INMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEI 787
           INMY+G+SE+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+
Sbjct: 774 INMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAEL 833

Query: 788 DGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKL 847
           DGL  S+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VG N D + + RVL A+TRKFKL
Sbjct: 834 DGLH-STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKL 892

Query: 848 SEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEY 907
              VSL +V   CP   TGAD+Y+LC+DA   A KR+V   + G  P       ++++  
Sbjct: 893 EPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPGSS----ALMLTM 948

Query: 908 VDFIKAMDQLSPSLSITELKKYEMLRDQF 936
            D ++A  +L PS+S  EL +Y+ ++ +F
Sbjct: 949 EDLLQAAARLQPSVSEQELLRYKRIQRKF 977



>gi|21361244|ref|NP_000278.2| peroxisomal biogenesis factor 6 [Homo sapiens]
 gi|18147118|dbj|BAB83046.1| peroxine Pex6p [Homo sapiens]
          Length = 980

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 266/629 (42%), Positives = 377/629 (59%), Gaps = 50/629 (7%)

Query: 311 PSNERFLRVNHSQTALVLGGTVSS--GLPPDLLVYRSKVPMPLQEETVNILASVLSPPLC 368
           P++       H+   +V G T+S    LP +     S +  P  E  V+ L +VL P L 
Sbjct: 396 PASAYLADTTHTSLYMV-GSTLSPVPWLPSEESTLWSSLSPPGLEALVSELCAVLKPRLQ 454

Query: 369 PSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQT 428
           P         +VLL G PGCGK TVV      LGLH+++  C SL A S     T L   
Sbjct: 455 PGGALLTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAI 514

Query: 429 FNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDXXXXX 488
           F+ ARR  P +LLL   D+        G   D +G    + +V+R L   + N D     
Sbjct: 515 FSRARRCRPAVLLLTAVDLL-------GRDRDGLGEDARVMAVLRHL---LLNEDPLNSC 564

Query: 489 XXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQS 548
                             ++++A+    + +   ++  F HE+ + +L++ QR  +L   
Sbjct: 565 P----------------PLMVVATTSRAQDLPADVQTAFPHELEVPALSEGQRLSIL--- 605

Query: 549 LQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINS-LSDD 607
            + ++  L +  +  +  L  + +GF+  DL AL+  +      S+ + T+  NS L+  
Sbjct: 606 -RALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHS------SRAACTRIKNSGLAGG 658

Query: 608 LHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVK 667
           L   D     ++  +   L A EDF +AL++ +  ++ A+GAPK+P+V W DVGGL++VK
Sbjct: 659 LTEED---EGELCAAGFPLLA-EDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGLQEVK 714

Query: 668 TSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 727
             IL+T+QLPL H +L  S   +RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPEL
Sbjct: 715 KEILETIQLPLEHPEL-LSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPEL 773

Query: 728 INMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEI 787
           INMY+G+SE+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+
Sbjct: 774 INMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAEL 833

Query: 788 DGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKL 847
           DGL  S+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VG N D + + RVL A+TRKFKL
Sbjct: 834 DGLH-STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKL 892

Query: 848 SEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEY 907
              VSL +V   CP   TGAD+Y+LC+DA   A KR+V   + G     E    ++++  
Sbjct: 893 EPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEG----LEQGSSALMLTM 948

Query: 908 VDFIKAMDQLSPSLSITELKKYEMLRDQF 936
            D ++A  +L PS+S  EL +Y+ ++ +F
Sbjct: 949 EDLLQAAARLQPSVSEQELLRYKRIQRKF 977



>gi|109071186|ref|XP_001089520.1| PREDICTED: peroxisomal biogenesis factor 6 isoform 4 [Macaca
           mulatta]
          Length = 892

 Score =  412 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 282/726 (38%), Positives = 401/726 (55%), Gaps = 69/726 (9%)

Query: 217 PGYASHLRVSFVKIPECGTIPSLKVNSSFEAEERQGLIDSALQKYFGTDRQLSRGDIFRI 276
           P +A  L +  V  P   T                G  D  L ++F   R +  GD+  +
Sbjct: 227 PPFARELYIEIVSSPHYST---------------NGNYDGVLYRHFQIPRVVQEGDVLCV 271

Query: 277 YIDWNCGSSICNPCSQRLCSESDDYIYFKVIAME----PSNERFLRVNHSQTALVLGGTV 332
                    I     ++L    + +   K  A E    P++       H+   +V G T+
Sbjct: 272 PTIGQV--EILEGSPEKLPRWREMFFKVKKTAGEAPDGPASAYLADTTHTSLYMV-GSTL 328

Query: 333 SS--GLPPDLLVYRSKVPMPLQEETVNILASVLSPPLCPSALASKLRVAVLLHGIPGCGK 390
           S    LP +     S +  P  E  V+ L +VL P L P         +VLL G PGCGK
Sbjct: 329 SPVPWLPSEKSTLWSSLSPPGLEALVSELCAVLKPRLQPGGALLTGSSSVLLRGPPGCGK 388

Query: 391 RTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKN 450
            TVV     +LGLH+++  C SL A S     T L   F+ ARR  P +LLL   D+   
Sbjct: 389 TTVVAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRARRCRPAVLLLTAVDL--- 445

Query: 451 LGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDXXXXXXXXXXXXXXXVGKFRGHQVLLI 510
           LG     LG       E A V+  L   + + D                       ++++
Sbjct: 446 LGRDRDGLG-------EDARVVAALRHLLLDEDPLNSCP----------------PLMVV 482

Query: 511 ASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQ 570
           A+    + +   ++  F HE+ + +L++ QR  +L    + ++  L +  +  +  L  +
Sbjct: 483 ATTSRAQDLPADVQTAFPHELEVPALSEGQRLSIL----RALTAHLPLGQEVNLAQLARR 538

Query: 571 TSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKE 630
            +GF+  DL AL+         S  +   +I +L     G+      ++  +   L A E
Sbjct: 539 CAGFVVGDLYALLTH-------SSRAACTRIKNLGL-AGGLTEEDEGELCAAGFPLLA-E 589

Query: 631 DFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRK 690
           DF +AL+  +  ++ A+GAPK+P+V W DVGGL++VK  IL+T+QLPL H +L  S   +
Sbjct: 590 DFGQALELQQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPEL-LSLGLR 648

Query: 691 RSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSAR 750
           RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPELINMY+G+SE+NVR++F +AR+A 
Sbjct: 649 RSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAA 708

Query: 751 PCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLID 810
           PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+DGL  S+QD+F+IGA+NRPDL+D
Sbjct: 709 PCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLH-STQDVFVIGATNRPDLLD 767

Query: 811 PALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMY 870
           PALLRPGRFDKL++VG N D + + RVL A+TRKFKL   VSL +V   CP   TGAD+Y
Sbjct: 768 PALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLY 827

Query: 871 ALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPSLSITELKKYE 930
           +LC+DA   A KR+V   + G  P       ++++   D ++A  +L PS+S  EL +Y+
Sbjct: 828 SLCSDAMTAALKRRVHDLEEGLEPGSS----ALMLTMEDLLQAAARLQPSVSEQELLRYK 883

Query: 931 MLRDQF 936
            ++ +F
Sbjct: 884 RIQHKF 889



>gi|18147120|dbj|BAB83047.1| peroxin Pex6p [Homo sapiens]
 gi|119624534|gb|EAX04129.1| peroxisomal biogenesis factor 6, isoform CRA_d [Homo sapiens]
          Length = 892

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 266/629 (42%), Positives = 377/629 (59%), Gaps = 50/629 (7%)

Query: 311 PSNERFLRVNHSQTALVLGGTVSS--GLPPDLLVYRSKVPMPLQEETVNILASVLSPPLC 368
           P++       H+   +V G T+S    LP +     S +  P  E  V+ L +VL P L 
Sbjct: 308 PASAYLADTTHTSLYMV-GSTLSPVPWLPSEESTLWSSLSPPGLEALVSELCAVLKPRLQ 366

Query: 369 PSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQT 428
           P         +VLL G PGCGK TVV      LGLH+++  C SL A S     T L   
Sbjct: 367 PGGALLTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAI 426

Query: 429 FNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVSFEIASVIRELTEPVSNGDXXXXX 488
           F+ ARR  P +LLL   D+        G   D +G    + +V+R L   + N D     
Sbjct: 427 FSRARRCRPAVLLLTAVDLL-------GRDRDGLGEDARVMAVLRHL---LLNEDPLNSC 476

Query: 489 XXXXXXXXXXVGKFRGHQVLLIASAESTEGISPTIRRCFSHEIRMGSLNDEQRSEMLSQS 548
                             ++++A+    + +   ++  F HE+ + +L++ QR  +L   
Sbjct: 477 P----------------PLMVVATTSRAQDLPADVQTAFPHELEVPALSEGQRLSIL--- 517

Query: 549 LQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINS-LSDD 607
            + ++  L +  +  +  L  + +GF+  DL AL+  +      S+ + T+  NS L+  
Sbjct: 518 -RALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHS------SRAACTRIKNSGLAGG 570

Query: 608 LHGVDIHQASQIDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVK 667
           L   D     ++  +   L A EDF +AL++ +  ++ A+GAPK+P+V W DVGGL++VK
Sbjct: 571 LTEED---EGELCAAGFPLLA-EDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGLQEVK 626

Query: 668 TSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPEL 727
             IL+T+QLPL H +L  S   +RSG+LL+GPPGTGKTLLAKAVATECSL FLSVKGPEL
Sbjct: 627 KEILETIQLPLEHPEL-LSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPEL 685

Query: 728 INMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEI 787
           INMY+G+SE+NVR++F +AR+A PC+IFFDELDSLAP+RG SGDSGGVMDRVVSQ+LAE+
Sbjct: 686 INMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAEL 745

Query: 788 DGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKL 847
           DGL  S+QD+F+IGA+NRPDL+DPALLRPGRFDKL++VG N D + + RVL A+TRKFKL
Sbjct: 746 DGLH-STQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKL 804

Query: 848 SEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEY 907
              VSL +V   CP   TGAD+Y+LC+DA   A KR+V   + G  P       ++++  
Sbjct: 805 EPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPGSS----ALMLTM 860

Query: 908 VDFIKAMDQLSPSLSITELKKYEMLRDQF 936
            D ++A  +L PS+S  EL +Y+ ++ +F
Sbjct: 861 EDLLQAAARLQPSVSEQELLRYKRIQRKF 889