BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= AT1G48635__[Arabidopsis_thaliana]
(364 letters)
Database: nr.pal
6,348,806 sequences; 2,166,943,470 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22330115|ref|NP_683410.1| peroxin-3 family protein [Arab... 690 0.0
gi|12597815|gb|AAG60126.1|AC073555_10 lysine and histidine ... 665 0.0
gi|12321594|gb|AAG50845.1|AC074308_1 hypothetical protein, ... 615 e-174
gi|21554142|gb|AAM63222.1| unknown [Arabidopsis thaliana] 536 e-151
gi|18401790|ref|NP_566598.1| peroxin-3 family protein [Arab... 536 e-150
gi|157343652|emb|CAO68158.1| unnamed protein product [Vitis... 439 e-121
gi|42572473|ref|NP_974332.1| peroxin-3 family protein [Arab... 431 e-119
gi|115478488|ref|NP_001062839.1| Os09g0314300 [Oryza sativa... 306 1e-81
gi|125563181|gb|EAZ08561.1| hypothetical protein OsI_029793... 296 1e-78
gi|9294071|dbj|BAB02028.1| unnamed protein product [Arabido... 265 5e-69
gi|168033870|ref|XP_001769437.1| predicted protein [Physcom... 192 3e-47
gi|168001339|ref|XP_001753372.1| predicted protein [Physcom... 183 2e-44
gi|168004808|ref|XP_001755103.1| predicted protein [Physcom... 181 7e-44
gi|157343645|emb|CAO68151.1| unnamed protein product [Vitis... 152 5e-35
gi|115704775|ref|XP_780894.2| PREDICTED: similar to peroxis... 108 7e-22
gi|115950368|ref|XP_001176855.1| PREDICTED: similar to pero... 108 7e-22
gi|50742652|ref|XP_419708.1| PREDICTED: similar to peroxiso... 106 3e-21
gi|149642693|ref|NP_001092457.1| peroxisomal biogenesis fac... 103 2e-20
gi|55627480|ref|XP_518776.1| PREDICTED: peroxisomal biogene... 102 4e-20
gi|109072523|ref|XP_001091411.1| PREDICTED: peroxisomal bio... 102 6e-20
gi|4505727|ref|NP_003621.1| peroxisomal biogenesis factor 3... 101 7e-20
gi|60834063|gb|AAX37078.1| peroxisomal biogenesis factor 3 ... 101 7e-20
gi|41055494|ref|NP_956522.1| peroxisomal biogenesis factor ... 100 2e-19
gi|125846558|ref|XP_001331521.1| PREDICTED: hypothetical pr... 100 2e-19
gi|12230450|sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis fac... 100 2e-19
gi|149409043|ref|XP_001507262.1| PREDICTED: similar to pero... 98 8e-19
gi|126310649|ref|XP_001370565.1| PREDICTED: similar to pero... 98 1e-18
gi|73946081|ref|XP_541132.2| PREDICTED: similar to Peroxiso... 97 1e-18
gi|13786194|ref|NP_112640.1| peroxisomal biogenesis factor ... 97 2e-18
gi|149744217|ref|XP_001497293.1| PREDICTED: similar to pero... 96 3e-18
gi|148671553|gb|EDL03500.1| peroxisomal biogenesis factor 3... 96 4e-18
gi|9910484|ref|NP_064345.1| peroxisomal biogenesis factor 3... 96 5e-18
gi|26344674|dbj|BAC35986.1| unnamed protein product [Mus mu... 96 5e-18
gi|148236992|ref|NP_001085641.1| MGC82731 protein [Xenopus ... 96 6e-18
gi|113931170|ref|NP_001039031.1| peroxisomal biogenesis fac... 94 2e-17
gi|148671552|gb|EDL03499.1| peroxisomal biogenesis factor 3... 88 9e-16
gi|156390523|ref|XP_001635320.1| predicted protein [Nematos... 87 2e-15
gi|170054875|ref|XP_001863328.1| peroxisomal biogenesis fac... 87 3e-15
gi|114609586|ref|XP_001172297.1| PREDICTED: similar to Pex3... 86 4e-15
gi|114052659|ref|NP_001040264.1| peroxisomal biogenesis fac... 84 2e-14
gi|157130508|ref|XP_001661904.1| perixosomal biogenesis fac... 83 4e-14
gi|90084964|dbj|BAE91223.1| unnamed protein product [Macaca... 80 2e-13
gi|66552210|ref|XP_625168.1| PREDICTED: similar to CG6859-P... 79 7e-13
gi|156545722|ref|XP_001604955.1| PREDICTED: similar to peri... 78 1e-12
gi|118782681|ref|XP_312432.3| AGAP002507-PA [Anopheles gamb... 74 2e-11
gi|165970357|gb|AAI58162.1| Unknown (protein for MGC:135489... 70 2e-10
gi|31652310|emb|CAD92492.1| peroxisomal biogenesis factor 3... 69 6e-10
gi|91079218|ref|XP_970039.1| PREDICTED: similar to CG6859-P... 69 7e-10
gi|67523651|ref|XP_659885.1| hypothetical protein AN2281.2 ... 67 1e-09
gi|115438272|ref|XP_001218024.1| conserved hypothetical pro... 67 2e-09
gi|125978273|ref|XP_001353169.1| GA19910-PA [Drosophila pse... 67 2e-09
gi|21357431|ref|NP_648753.1| CG6859 CG6859-PA [Drosophila m... 67 2e-09
gi|2498757|sp|Q92262|PEX3_PICPA Peroxisomal biogenesis fact... 64 1e-08
gi|164658764|ref|XP_001730507.1| hypothetical protein MGL_2... 64 2e-08
gi|169765165|ref|XP_001817054.1| [Aspergillus oryzae] >gi|8... 64 2e-08
gi|111609717|gb|ABH11414.1| peroxin 3 [Penicillium chrysoge... 62 5e-08
gi|119498501|ref|XP_001266008.1| peroxisomal membrane prote... 61 1e-07
gi|50556692|ref|XP_505754.1| YlPEX3 [Yarrowia lipolytica] >... 60 2e-07
gi|159126261|gb|EDP51377.1| peroxisomal membrane protein (P... 60 3e-07
gi|50547267|ref|XP_501103.1| hypothetical protein [Yarrowia... 60 3e-07
gi|70998562|ref|XP_754003.1| peroxisomal membrane protein (... 60 3e-07
gi|121712706|ref|XP_001273964.1| peroxisomal membrane prote... 59 5e-07
gi|145608718|ref|XP_369909.2| hypothetical protein MGG_0642... 57 3e-06
gi|154311445|ref|XP_001555052.1| hypothetical protein BC1G_... 56 4e-06
gi|46125129|ref|XP_387118.1| hypothetical protein FG06942.1... 56 4e-06
gi|156065165|ref|XP_001598504.1| hypothetical protein SS1G_... 56 5e-06
gi|119181807|ref|XP_001242086.1| hypothetical protein CIMG_... 56 5e-06
gi|66813422|ref|XP_640890.1| transmembrane protein [Dictyos... 55 7e-06
gi|145253721|ref|XP_001398373.1| hypothetical protein An17g... 54 1e-05
gi|71024235|ref|XP_762347.1| hypothetical protein UM06200.1... 51 1e-04
gi|169624208|ref|XP_001805510.1| hypothetical protein SNOG_... 51 1e-04
gi|47207019|emb|CAF91476.1| unnamed protein product [Tetrao... 51 1e-04
gi|85109582|ref|XP_962987.1| hypothetical protein NCU06175 ... 48 0.001
gi|2498756|sp|Q01497|PEX3_PICAN Peroxisomal biogenesis fact... 44 0.014
gi|116207984|ref|XP_001229801.1| hypothetical protein CHGG_... 44 0.019
gi|68484370|ref|XP_713871.1| hypothetical protein CaO19.442... 44 0.019
gi|63054664|ref|NP_594868.2| peroxin-3 (predicted) [Schizos... 44 0.020
gi|6320536|ref|NP_010616.1| Peroxisomal membrane protein (P... 43 0.036
gi|7491027|pir||T38475 hypothetical protein SPAC29A4.14c - ... 43 0.041
gi|68483962|ref|XP_714071.1| peroxisomal integral membrane ... 43 0.043
gi|149247879|ref|XP_001528327.1| conserved hypothetical pro... 42 0.058
gi|146418842|ref|XP_001485386.1| hypothetical protein PGUG_... 42 0.059
gi|150866213|ref|XP_001385728.2| Peroxisomal biogenesis fac... 40 0.22
gi|163644437|gb|AAB52665.2| Peroxisome assembly factor prot... 40 0.26
gi|157770057|ref|XP_001676849.1| Hypothetical protein CBG14... 40 0.26
gi|50293983|ref|XP_449403.1| hypothetical protein CAGL0M013... 38 0.96
gi|58265190|ref|XP_569751.1| Pex3p [Cryptococcus neoformans... 37 1.7
gi|134109127|ref|XP_776678.1| hypothetical protein CNBC1690... 37 1.7
gi|168705314|ref|ZP_02737591.1| hypothetical protein GobsU_... 37 2.0
gi|170574850|ref|XP_001892993.1| Peroxin-3 family protein [... 37 2.6
gi|156550478|ref|XP_001601404.1| PREDICTED: similar to 3-hy... 36 4.3
gi|88859472|ref|ZP_01134112.1| EAL domain protein [Pseudoal... 35 6.5
gi|10241597|emb|CAC09577.1| protein phosphatase 2C (PP2C) [... 35 7.0
gi|169770511|ref|XP_001819725.1| [Aspergillus oryzae] >gi|8... 35 8.9
gi|50309413|ref|XP_454714.1| unnamed protein product [Kluyv... 35 9.2
>gi|22330115|ref|NP_683410.1| peroxin-3 family protein [Arabidopsis thaliana]
gi|18650624|gb|AAL75911.1| At1g48640/F11I4_17 [Arabidopsis thaliana]
gi|21700807|gb|AAM70527.1| At1g48640/F11I4_17 [Arabidopsis thaliana]
gi|51968824|dbj|BAD43104.1| unknown protein [Arabidopsis thaliana]
Length = 364
Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats.
Identities = 364/364 (100%), Positives = 364/364 (100%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM
Sbjct: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK
Sbjct: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH
Sbjct: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV
Sbjct: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA
Sbjct: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
Query: 361 NMPQ 364
NMPQ
Sbjct: 361 NMPQ 364
>gi|12597815|gb|AAG60126.1|AC073555_10 lysine and histidine specific transporter, putative [Arabidopsis
thaliana]
Length = 809
Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats.
Identities = 340/372 (91%), Positives = 342/372 (91%), Gaps = 30/372 (8%)
Query: 10 KHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ---------- 59
+HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ
Sbjct: 7 EHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQLSSVLIKTDP 66
Query: 60 --------------------MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR 99
MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR
Sbjct: 67 LDFSSYGFSNGPVLFVLLFRMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR 126
Query: 100 LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA 159
LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA
Sbjct: 127 LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA 186
Query: 160 LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR 219
LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR
Sbjct: 187 LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR 246
Query: 220 VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL 279
VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL
Sbjct: 247 VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL 306
Query: 280 ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 339
ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN
Sbjct: 307 ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 366
Query: 340 RFLQIIRDLPEV 351
RFLQIIRDLPE+
Sbjct: 367 RFLQIIRDLPEI 378
>gi|12321594|gb|AAG50845.1|AC074308_1 hypothetical protein, 3' partial [Arabidopsis thaliana]
Length = 443
Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats.
Identities = 330/362 (91%), Positives = 331/362 (91%), Gaps = 30/362 (8%)
Query: 10 KHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ---------- 59
+HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ
Sbjct: 7 EHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQLSSVLIKTDP 66
Query: 60 --------------------MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR 99
MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR
Sbjct: 67 LDFSSYGFSNGPVLFVLLFRMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR 126
Query: 100 LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA 159
LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA
Sbjct: 127 LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA 186
Query: 160 LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR 219
LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR
Sbjct: 187 LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR 246
Query: 220 VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL 279
VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL
Sbjct: 247 VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL 306
Query: 280 ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 339
ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN
Sbjct: 307 ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 366
Query: 340 RF 341
R
Sbjct: 367 RL 368
>gi|21554142|gb|AAM63222.1| unknown [Arabidopsis thaliana]
Length = 358
Score = 536 bits (1382), Expect = e-151, Method: Composition-based stats.
Identities = 281/364 (77%), Positives = 318/364 (87%), Gaps = 6/364 (1%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MD VRG WRKHRRK+LVT CLGSGYLLYKLYN+HTR+LADLERELA+ERENDEIIKTQM
Sbjct: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQLW+ELK
Sbjct: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSHLL+E+DLI+RDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
L+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMSTGSPHH
Sbjct: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N+ EISLKC LV
Sbjct: 241 WVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLASNDFSNVAEISLKCCAVALV 297
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLFFTLLYA
Sbjct: 298 EEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 354
Query: 361 NMPQ 364
NMPQ
Sbjct: 355 NMPQ 358
>gi|18401790|ref|NP_566598.1| peroxin-3 family protein [Arabidopsis thaliana]
Length = 358
Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats.
Identities = 281/364 (77%), Positives = 318/364 (87%), Gaps = 6/364 (1%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MD VRG WRKHRRK+LVT CLGSGYLLYKLYN+HTR+LADLERELA+ERENDEIIKTQM
Sbjct: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQLW+ELK
Sbjct: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSHLL+E+DLI+RDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
L+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMSTGSPHH
Sbjct: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N+ EISLKC LV
Sbjct: 241 WVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCCAVALV 297
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLFFTLLYA
Sbjct: 298 EEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 354
Query: 361 NMPQ 364
NMPQ
Sbjct: 355 NMPQ 358
>gi|157343652|emb|CAO68158.1| unnamed protein product [Vitis vinifera]
Length = 375
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 230/366 (62%), Positives = 287/366 (78%), Gaps = 10/366 (2%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
FWR+HRRK+ V+ G GSGYLLYKLY++H RRL DLERELA +REN+E+IK QM+AHFES
Sbjct: 9 FWRRHRRKIFVSVGVFGSGYLLYKLYDAHRRRLDDLERELAVQRENEELIKAQMQAHFES 68
Query: 67 IQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGM---LSPPEKLQLWDELKILS 123
IQ I D+TTLPH+M +LS RI+EE+D+SH+ +RL +GKG L+P EKL+LWD LKILS
Sbjct: 69 IQRIADTTTLPHSMLYLSGRIAEELDLSHLTERLMKGKGQPNTLTPSEKLELWDRLKILS 128
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTRMVLSLW++TMLSLYIRVQVNILGRHLY+DTAR GSSHLLEE D IDR D+QKFL+S
Sbjct: 129 FTRMVLSLWAMTMLSLYIRVQVNILGRHLYIDTARGGGSSHLLEEADPIDRHDQQKFLAS 188
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVD 243
ADFL ++P+LIS+M +A EVLKGKQL+DV + VL T+MQI+D+F+STG PH+ VD
Sbjct: 189 ADFLSNYSIPALISNMHAAAAEVLKGKQLRDVFNSMVLHGTIMQILDLFISTGKPHNLVD 248
Query: 244 YLMMPQDTK----LSRTTSDSSDEA-VSKFHQLMVETREVLISTEFTNIVEISLKCFTDV 298
YL MP DTK S + DSS A V+KF QLMVETR VL S EF N++++SL+ D
Sbjct: 249 YL-MPDDTKSYKPASPSNGDSSTPADVTKFDQLMVETRAVLSSAEFINVIDVSLRTVVDA 307
Query: 299 LVEEME-TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTL 357
+VE+M Q G ++G LAK+LP++ + ++ EPSKNRF+QII+ PEV+ FFTL
Sbjct: 308 VVEDMMGVQLGGGSPSSGMVLAKLLPRVAQMGPLLLEEPSKNRFIQIIQKAPEVEFFFTL 367
Query: 358 LYANMP 363
LYANMP
Sbjct: 368 LYANMP 373
>gi|42572473|ref|NP_974332.1| peroxin-3 family protein [Arabidopsis thaliana]
Length = 304
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 230/310 (74%), Positives = 266/310 (85%), Gaps = 6/310 (1%)
Query: 55 IIKTQMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQ 114
++ +MKAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQ
Sbjct: 1 MLYVRMKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQ 60
Query: 115 LWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDR 174
LW+ELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSHLL+E+DLI+R
Sbjct: 61 LWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIER 120
Query: 175 DDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS 234
DDEQKFL+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMS
Sbjct: 121 DDEQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMS 180
Query: 235 TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKC 294
TGSPHHWVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N+ EISLKC
Sbjct: 181 TGSPHHWVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKC 237
Query: 295 FTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLF 354
LVEEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLF
Sbjct: 238 CAVALVEEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLF 294
Query: 355 FTLLYANMPQ 364
FTLLYANMPQ
Sbjct: 295 FTLLYANMPQ 304
>gi|115478488|ref|NP_001062839.1| Os09g0314300 [Oryza sativa (japonica cultivar-group)]
gi|50726384|dbj|BAD33995.1| peroxisomal biogenesis factor 3-like [Oryza sativa Japonica Group]
gi|113631072|dbj|BAF24753.1| Os09g0314300 [Oryza sativa (japonica cultivar-group)]
Length = 380
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 168/373 (45%), Positives = 241/373 (64%), Gaps = 15/373 (4%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
RGFW +HRRK+LV+ G G+GY Y+ +SH R+L +E+ ER +EIIK Q++ HF
Sbjct: 6 RGFWGRHRRKILVSLGVAGAGYAAYRYLDSHRRQLVRVEQRALEERAAEEIIKNQLQTHF 65
Query: 65 ESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKG-----MLSPPEKLQLWDEL 119
E++Q I D+TTLP AM +L RI EE+D+SH+ ++L GKG L+P EK W+++
Sbjct: 66 ENVQKISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDTWEKI 125
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQK 179
KILSFTR V S+W++T+LSLY+RVQV ILGRHLY+D AR + L E D + +
Sbjct: 126 KILSFTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQLQEGSDTFSKSGHKD 185
Query: 180 FLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPH 239
FL++AD+L T + +LI+ MQ +A E+LK KQLKD + + ET++QI+ FM +
Sbjct: 186 FLATADYLATYGINALITKMQHAATEILKEKQLKDPMGIDEVLETILQILKQFMGLCEDN 245
Query: 240 HWVDYLMMPQD----TKLSRTTSDSSDEA-----VSKFHQLMVETREVLISTEFTNIVEI 290
W++YL +P++ +L +S D++ V K QLM ETR VL S +F NI++
Sbjct: 246 SWINYL-VPENANVYAQLMAVSSSGFDDSSLLKDVRKLDQLMSETRIVLSSDDFRNIMDR 304
Query: 291 SLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPE 350
SLK V+VE++ Q A G PLAK+L ++ + + EP KN+ +QIIR +PE
Sbjct: 305 SLKKIASVVVEDLAVQIGAPIPPPGLPLAKLLAKVAQLSLPLLEEPDKNKHIQIIRSMPE 364
Query: 351 VKLFFTLLYANMP 363
V+LF+T LYANMP
Sbjct: 365 VELFYTFLYANMP 377
>gi|125563181|gb|EAZ08561.1| hypothetical protein OsI_029793 [Oryza sativa (indica
cultivar-group)]
gi|125605172|gb|EAZ44208.1| hypothetical protein OsJ_027691 [Oryza sativa (japonica
cultivar-group)]
Length = 376
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 166/373 (44%), Positives = 238/373 (63%), Gaps = 19/373 (5%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
RGFW +HRRK+LV+ G G+GY Y+ +SH R+L +E+ ER +EIIK Q++ HF
Sbjct: 6 RGFWGRHRRKILVSLGVAGAGYAAYRYLDSHRRQLVRVEQRALEERAAEEIIKNQLQTHF 65
Query: 65 ESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKG-----MLSPPEKLQLWDEL 119
E++Q I D+TTLP AM +L RI EE+D+SH+ ++L GKG L+P EK W+++
Sbjct: 66 ENVQKISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDTWEKI 125
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQK 179
KILSFTR V S+W++T+LSLY+RVQV ILGRHLY+D AR + L E D + +
Sbjct: 126 KILSFTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQLQEGSDTFSKSGHKD 185
Query: 180 FLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPH 239
FL++AD+L T + +LI+ MQ +A E+LK KQLKD + + ET++QI+ FM +
Sbjct: 186 FLATADYLATYGINALITKMQHAATEILKEKQLKDPMGIDEVLETILQILKQFMGLCEDN 245
Query: 240 HWVDYLMMPQD----TKLSRTTSDSSDEA-----VSKFHQLMVETREVLISTEFTNIVEI 290
W++YL +P++ +L +S D++ V K QLM ETR VL NI++
Sbjct: 246 SWINYL-VPENANVYAQLMAVSSSGFDDSSLLKDVRKLDQLMSETRIVLSR----NIMDR 300
Query: 291 SLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPE 350
SLK V+VE++ Q A G PLAK+L ++ + + EP KN+ +QIIR +PE
Sbjct: 301 SLKKIASVVVEDLAVQIGAPIPPPGLPLAKLLAKVAQLSLPLLEEPDKNKHIQIIRSMPE 360
Query: 351 VKLFFTLLYANMP 363
V+LF+T LYANMP
Sbjct: 361 VELFYTFLYANMP 373
>gi|9294071|dbj|BAB02028.1| unnamed protein product [Arabidopsis thaliana]
Length = 197
Score = 265 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 144/198 (72%), Positives = 165/198 (83%), Gaps = 6/198 (3%)
Query: 167 EEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVM 226
+E+DLI+RDDEQKFL+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM
Sbjct: 6 DELDLIERDDEQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVM 65
Query: 227 QIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTN 286
+I+DVFMSTGSPHHWVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N
Sbjct: 66 RILDVFMSTGSPHHWVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLTSNDFSN 122
Query: 287 IVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIR 346
+ EISLKC LVEEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IR
Sbjct: 123 VAEISLKCCAVALVEEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIR 179
Query: 347 DLPEVKLFFTLLYANMPQ 364
DLPEVKLFFTLLYANMPQ
Sbjct: 180 DLPEVKLFFTLLYANMPQ 197
>gi|168033870|ref|XP_001769437.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679357|gb|EDQ65806.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 133/380 (35%), Positives = 210/380 (55%), Gaps = 26/380 (6%)
Query: 2 DFVRGFWRKHRRKVLVTAGCLGSG----YLLYKL-YNSHTRRLADLERELAHERENDEII 56
DF + + +KH+R +LV AG +G G Y L+ L S R+ D R RE +E
Sbjct: 12 DF-KAWVKKHQRSLLVAAGLVGGGSAVYYGLHYLGLTSQARKERDAARAALLHREAEERA 70
Query: 57 KTQMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKG---MLSPPEKL 113
+ Q+++HFESIQ I D+TTLP + L + ++D+S + ++L GK LS +K+
Sbjct: 71 EAQLQSHFESIQRISDTTTLPSVLPQLKASLFSKVDLSGLTEKLILGKDDPQALSQRDKM 130
Query: 114 QLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLID 173
QLW ELK LSFTR V ++ ++++L L+IR+Q+NILGR +Y DTAR + L +
Sbjct: 131 QLWQELKTLSFTRTVCAMSALSLLDLFIRIQLNILGRRVYFDTARDFMNPEDLHAP--LS 188
Query: 174 RDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFM 233
+ KF++ A +L + +L+ D+ +AE L+GKQLK+ T L+ ++I+
Sbjct: 189 MSVQHKFIAFAGYLHHKGLAALVGDIYKAAEIELRGKQLKESFTLYDLKNVFVRILATLD 248
Query: 234 STGSPHHWVDYLM-----MPQD----TKLSRTTSDSSDEAVSK---FHQLMVETREVLIS 281
S WV Y++ +P+D + + ++ +D A S QLM ETR VL S
Sbjct: 249 SKRPA--WVQYVLPPDNVLPEDLAGASSAADASNQFADVATSDNEVLDQLMNETRAVLAS 306
Query: 282 TEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
EF + + L+ D ++EE+ T G +G PLAK+LP + + + P +NRF
Sbjct: 307 NEFHEVQAVCLEVMLDGVMEELYT-IYRGSSDSGIPLAKLLPPVAGAGSTLLEHPDENRF 365
Query: 342 LQIIRDLPEVKLFFTLLYAN 361
++I+ LP+V F L+Y N
Sbjct: 366 IRILASLPQVHAFCALVYTN 385
>gi|168001339|ref|XP_001753372.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695251|gb|EDQ81595.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 399
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 123/380 (32%), Positives = 204/380 (53%), Gaps = 30/380 (7%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKL-----YNSHTRRLADLERELAHERENDEIIKT 58
++ + +K+RR +L+ AG +G G +Y +S +R+ D R ++E +E +
Sbjct: 13 LKAWVKKYRRSLLIAAGLVGGGTAIYYGVQYLGLDSQSRKERDAARVALVQKEAEERAEV 72
Query: 59 QMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGK---GMLSPPEKLQL 115
Q+++HFE IQ I DSTTLP + L + ++D+ + D+L K +LS +K+QL
Sbjct: 73 QLQSHFEGIQRISDSTTLPSVLPHLKASLYSKVDLEGLTDKLMLCKVDPQLLSHRDKMQL 132
Query: 116 WDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRD 175
W ELK SF R V ++ +V++L L+IR+Q+NILGR +Y DTAR + +S + +
Sbjct: 133 WQELKTRSFARTVCAMTAVSLLDLFIRIQLNILGRRVYFDTARNMMNSE--DSHVPLSMS 190
Query: 176 DEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST 235
+ KF++ A +L + +L++D E VL+GKQLK+ T L++ M+I S
Sbjct: 191 VQHKFIAFAGYLHHKGLATLVADTYKVVEIVLRGKQLKEPYTIDELRDVFMKIRASLDSR 250
Query: 236 GSPHHWVDYLMMPQDT--------------KLSRTTSDSSDEAVSKFHQLMVETREVLIS 281
SP WV Y++ P++ S + D+ ++ QLM ETR V+ S
Sbjct: 251 RSP--WVQYVLPPENVLPDEFVATSSAADAAASVSDMTHEDDVLA---QLMNETRAVVSS 305
Query: 282 TEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
EF ++ + L D ++EE+ T G PLA++LP + + + P +NRF
Sbjct: 306 DEFNEVLAVCLDAILDGVMEELYT-IYRGSPDNSIPLARMLPPVAGAGSTLLEHPDENRF 364
Query: 342 LQIIRDLPEVKLFFTLLYAN 361
+ I+ +LP+V F L+Y N
Sbjct: 365 ISILANLPQVHAFCALVYTN 384
>gi|168004808|ref|XP_001755103.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693696|gb|EDQ80047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 121/345 (35%), Positives = 191/345 (55%), Gaps = 25/345 (7%)
Query: 34 SHTRRLADLERELAHERENDEIIKTQMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDV 93
S R+ D+ R +RE +E + Q+++HFESIQ I D+TTLP + L R+ ++D+
Sbjct: 48 SQARKERDVARAALLQREAEERAEAQLQSHFESIQRISDTTTLPSMLPQLKDRLFSKVDL 107
Query: 94 SHVMDRLNQGK---GMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGR 150
S + ++L GK LS EK+QLW ELK LSF R V ++ ++++L L+IR+Q+NILGR
Sbjct: 108 SGLTEKLILGKEDPQSLSQREKMQLWQELKTLSFVRTVCAMSALSLLDLFIRIQLNILGR 167
Query: 151 HLYVDTARALGS---SHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVL 207
H+Y DTAR + SH+ + + + KF++ A +L + +L+ D+ +AE VL
Sbjct: 168 HVYFDTARDFMNPEDSHVPLSMSV-----QHKFIAYAGYLHHKGLDALVGDVNQAAEIVL 222
Query: 208 KGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQDT---KLSRTTSDSSDEA 264
+ K LK+ T L++ M+I S S WV Y++ P + LS +S +
Sbjct: 223 RSKPLKEPYTLDDLRDVFMRIRATLDSKRSA--WVQYVLPPDNVLPDDLSVASSADASNP 280
Query: 265 VSK--------FHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGK 316
V++ QLM ETR VL+S EF ++ + + D ++EE+ G G
Sbjct: 281 VAEMALNDNEVLDQLMNETRAVLVSNEFHEVMAVCVDSMLDGVMEELYA-IYRGSSDNGI 339
Query: 317 PLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYAN 361
PLAK+LP + + + NRF++I+ DLP+V F L+Y N
Sbjct: 340 PLAKLLPPVAGAGSALLESLDDNRFIRILADLPQVHAFCALVYTN 384
>gi|157343645|emb|CAO68151.1| unnamed protein product [Vitis vinifera]
Length = 170
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 85/160 (53%), Positives = 112/160 (70%), Gaps = 7/160 (4%)
Query: 210 KQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTK----LSRTTSDSSDEA- 264
KQL+DV + VL T+MQI+D+F+STG PH+ VDYLM P DTK S + DSS A
Sbjct: 10 KQLRDVFNSMVLHGTIMQILDLFISTGKPHNLVDYLM-PDDTKSYKPASPSNGDSSTPAD 68
Query: 265 VSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEME-TQTEAGGLATGKPLAKVLP 323
V+KF QLMVETR VL S EF N++++SL+ D +VE+M Q G ++G LAK+LP
Sbjct: 69 VTKFDQLMVETRAVLSSAEFINVIDVSLRTVVDAVVEDMMGVQLGGGSPSSGMVLAKLLP 128
Query: 324 QIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYANMP 363
++ + ++ EPSKNRF+QII+ PEV+ FFTLLYANMP
Sbjct: 129 RVAQMGPLLLEEPSKNRFIQIIQKAPEVEFFFTLLYANMP 168
>gi|115704775|ref|XP_780894.2| PREDICTED: similar to peroxisomal biogenesis factor 3
[Strongylocentrotus purpuratus]
Length = 388
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 98/379 (25%), Positives = 181/379 (47%), Gaps = 42/379 (11%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH-FE 65
F ++HRRK LV G LLYK A+ + + E E E + +AH FE
Sbjct: 8 FVKRHRRKFLVLGAVAGGASLLYKY--------AEWKLKEWRETEEAECLAMARRAHHFE 59
Query: 66 SIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKIL 122
S Q + T L P + L ++ E ++ +L G K+ +W+ELK++
Sbjct: 60 SNQRTCNMTVLSMIPKLRELLLYHLNSE----ELIQKLKSGT-----ENKVVVWNELKVV 110
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
SFTRMV+S++S +L+ ++RVQ+NILG ++Y+DT G + L +D ++++L+
Sbjct: 111 SFTRMVVSVYSTVLLTAFLRVQLNILGGYMYLDTLA--GKNGLTYYQVHATQDVQKEYLA 168
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIV----------DVF 232
+L+T+ + LI+ +Q + V+ L+ +++ ++E + ++ +V
Sbjct: 169 MVQYLLTDGLTELINHVQEVVQNVVGSISLQQLLSLSDMEEIIAKVRGQVETTQYGGEVV 228
Query: 233 MSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
+ S H YL+ P+ + SD+ + Q+ +ETR+++ S +F+ ++ L
Sbjct: 229 VPDCSIHPLGRYLLKPEGLDGEESACRLSDDQLV-LSQMQIETRDLVESHDFSCVMNSCL 287
Query: 293 KCFTDVLVEEME-----TQTEAGGLATGKPL--AKVLPQIEKTMNVITAEPSKNRFLQII 345
L++ M T G G L AK +P + +N + + + N F+Q +
Sbjct: 288 DIGFSRLLDNMAEFFRPVTTRNGESPCGLKLAMAKAIPIVNGQVNALCCD-TPNHFIQEL 346
Query: 346 RDLPEVKLFFTLLYANMPQ 364
+ VK F + +Y Q
Sbjct: 347 LLMQCVKDFASNVYEGFSQ 365
>gi|115950368|ref|XP_001176855.1| PREDICTED: similar to peroxisomal biogenesis factor 3
[Strongylocentrotus purpuratus]
Length = 388
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 98/379 (25%), Positives = 181/379 (47%), Gaps = 42/379 (11%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH-FE 65
F ++HRRK LV G LLYK A+ + + E E E + +AH FE
Sbjct: 8 FVKRHRRKFLVLGAVAGGASLLYKY--------AEWKLKEWRETEEAECLAMARRAHHFE 59
Query: 66 SIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKIL 122
S Q + T L P + L ++ E ++ +L G K+ +W+ELK++
Sbjct: 60 SNQRTCNMTVLSMIPKLRELLLYHLNSE----ELIQKLKSGT-----ENKVVVWNELKVV 110
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
SFTRMV+S++S +L+ ++RVQ+NILG ++Y+DT G + L +D ++++L+
Sbjct: 111 SFTRMVVSVYSTVLLTAFLRVQLNILGGYMYLDTLA--GKNGLTYYQVHATQDVQKEYLA 168
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIV----------DVF 232
+L+T+ + LI+ +Q + V+ L+ +++ ++E + ++ +V
Sbjct: 169 MVQYLLTDGLTELINHVQEVVQNVVGSISLQQLLSLSDMEEIIAKVRGQVETTQYGGEVV 228
Query: 233 MSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
+ S H YL+ P+ + SD+ + Q+ +ETR+++ S +F+ ++ L
Sbjct: 229 VPDCSIHPLGRYLLKPEGLDGEESACRLSDDQLV-LSQMQIETRDLVESHDFSCVMNSCL 287
Query: 293 KCFTDVLVEEME-----TQTEAGGLATGKPL--AKVLPQIEKTMNVITAEPSKNRFLQII 345
L++ M T G G L AK +P + +N + + + N F+Q +
Sbjct: 288 DIGFSRLLDNMAEFFRPVTTRNGESPCGLKLAMAKAIPIVNGQVNALCCD-TPNHFIQEL 346
Query: 346 RDLPEVKLFFTLLYANMPQ 364
+ VK F + +Y Q
Sbjct: 347 LLMQCVKDFASNVYEGFSQ 365
>gi|50742652|ref|XP_419708.1| PREDICTED: similar to peroxisomal biogenesis factor 3 [Gallus
gallus]
Length = 369
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 100/372 (26%), Positives = 183/372 (49%), Gaps = 40/372 (10%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K LV LG YLL K R + ERE A + I + + + HFES
Sbjct: 8 FLKRHKKKCLVLGTFLGGVYLLGKYGQKKIREIQ--EREAA-----EYIAQARRQYHFES 60
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P L +++ E S + +R P KL++W++LKI+S
Sbjct: 61 NQRTCNMTVLSMLPTLRDALMHQLNSESLTSLLKNR---------PANKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A + L + +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVCKNG----TTPLAPPEVQQQYLSS 167
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGS----PH 239
L+ + + LI+ ++ + +V LK ++ L++ + +I DV S P+
Sbjct: 168 IQHLLGDGLTELITIVKQAVHKVFGSISLKHALSLLELEQKLKEIRDVVEHRDSDQVAPY 227
Query: 240 HWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL-KCFTDV 298
+ + +MP + T + E + +L+ ETR++L S +F+ ++ L + F+ +
Sbjct: 228 SPLCHYLMPDEENPLATQACGLTERDTATIKLLNETRDMLESPDFSTVLSTCLNRGFSQL 287
Query: 299 L--VEEMETQTEAGGLATG---------KPLAKVLPQIEKTMNVITAEPSKNRFLQIIRD 347
L + E TE G PLAK++P I ++ I +E + + F+Q +
Sbjct: 288 LDNMAEFFRPTEQDFSQNGSVNSLSSVSLPLAKIIPIINGQIHSICSE-TPSHFVQDLLM 346
Query: 348 LPEVKLFFTLLY 359
+ ++K F +Y
Sbjct: 347 MEQMKDFAANVY 358
>gi|149642693|ref|NP_001092457.1| peroxisomal biogenesis factor 3 [Bos taurus]
gi|148878101|gb|AAI46193.1| MGC166343 protein [Bos taurus]
Length = 373
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 98/377 (25%), Positives = 186/377 (49%), Gaps = 46/377 (12%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + LG Y+L K R + ERE A + I + + + HFES
Sbjct: 8 FLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYHFES 60
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E + + R P KL++W++LKI+S
Sbjct: 61 NQRTCNMTVLSMLPTLREALMQQLNSESLTALLKTR---------PSNKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTVLAPPDVQQQYLSS 167
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDV---------FMS 234
L+ + + LI+ ++ + +++L LK ++ L++ + +I D+ +
Sbjct: 168 IQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRDLVEQHKSSSWINN 227
Query: 235 TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKC 294
GS Y+M ++T L+ S V+ +L+ ETR++L S +F+ ++ L
Sbjct: 228 DGSKSLLCHYMMPDEETPLAVQACGLSPRDVTTI-KLLNETRDMLESPDFSTVLNTCLSR 286
Query: 295 FTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRFL 342
L++ M E + G + PLAK++P I ++ + +E + + F+
Sbjct: 287 GFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIINGQIHSVCSE-TPSHFV 345
Query: 343 QIIRDLPEVKLFFTLLY 359
Q + + +VK F +Y
Sbjct: 346 QDLLMMEQVKDFAANVY 362
>gi|55627480|ref|XP_518776.1| PREDICTED: peroxisomal biogenesis factor 3 isoform 2 [Pan
troglodytes]
Length = 373
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 96/381 (25%), Positives = 189/381 (49%), Gaps = 48/381 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + ERE A + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++ S
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS-S 223
Query: 241 WVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEI 290
W++ Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 224 WINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNT 282
Query: 291 SLKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSK 338
L L++ M E + G + PLAK++P + ++ + +E +
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 341
Query: 339 NRFLQIIRDLPEVKLFFTLLY 359
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLTMEQVKDFAANVY 362
>gi|109072523|ref|XP_001091411.1| PREDICTED: peroxisomal biogenesis factor 3 [Macaca mulatta]
gi|62287020|sp|Q60HE1|PEX3_MACFA Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
gi|52782255|dbj|BAD51974.1| peroxisomal biogenesis factor 3 [Macaca fascicularis]
Length = 373
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 96/381 (25%), Positives = 189/381 (49%), Gaps = 48/381 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + ERE A + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++ S
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS-S 223
Query: 241 WVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEI 290
W++ Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 224 WINKDGSKSLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNT 282
Query: 291 SLKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSK 338
L L++ M E + G + PLAK++P + ++ + +E +
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 341
Query: 339 NRFLQIIRDLPEVKLFFTLLY 359
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLTMEQVKDFAANVY 362
>gi|4505727|ref|NP_003621.1| peroxisomal biogenesis factor 3 [Homo sapiens]
gi|3914303|sp|P56589|PEX3_HUMAN Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
gi|3336882|emb|CAA04879.1| Pex3 protein [Homo sapiens]
gi|4092648|emb|CAA10362.1| PEX3 protein [Homo sapiens]
gi|4218426|emb|CAA08904.1| Pex3p [Homo sapiens]
gi|5817246|emb|CAB53744.1| peroxisomal biogenesis factor 3 [Homo sapiens]
gi|8926849|dbj|BAA97993.1| Pex3p [Homo sapiens]
gi|15778945|gb|AAH14551.1| Peroxisomal biogenesis factor 3 [Homo sapiens]
gi|15930134|gb|AAH15506.1| Peroxisomal biogenesis factor 3 [Homo sapiens]
gi|33415063|gb|AAQ18039.1| transformation-related protein 18 [Homo sapiens]
gi|49457077|emb|CAG46859.1| PEX3 [Homo sapiens]
gi|119568251|gb|EAW47866.1| peroxisomal biogenesis factor 3 [Homo sapiens]
Length = 373
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 97/381 (25%), Positives = 188/381 (49%), Gaps = 48/381 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + ERE A + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR ++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++
Sbjct: 109 IISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSS L+ + + LI+ ++ + ++VL LK ++ L++ + +I ++ S
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS-S 223
Query: 241 WVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEI 290
W++ Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 224 WINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNT 282
Query: 291 SLKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSK 338
L L++ M E + G + PLAK++P + ++ + +E +
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 341
Query: 339 NRFLQIIRDLPEVKLFFTLLY 359
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLTMEQVKDFAANVY 362
>gi|60834063|gb|AAX37078.1| peroxisomal biogenesis factor 3 [synthetic construct]
Length = 374
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 97/381 (25%), Positives = 188/381 (49%), Gaps = 48/381 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + ERE A + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR ++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++
Sbjct: 109 IISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSS L+ + + LI+ ++ + ++VL LK ++ L++ + +I ++ S
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS-S 223
Query: 241 WVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEI 290
W++ Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 224 WINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNT 282
Query: 291 SLKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSK 338
L L++ M E + G + PLAK++P + ++ + +E +
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 341
Query: 339 NRFLQIIRDLPEVKLFFTLLY 359
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLTMEQVKDFAANVY 362
>gi|41055494|ref|NP_956522.1| peroxisomal biogenesis factor 3 [Danio rerio]
gi|28278477|gb|AAH46066.1| Peroxisomal biogenesis factor 3 [Danio rerio]
Length = 364
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 99/368 (26%), Positives = 180/368 (48%), Gaps = 37/368 (10%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEII-KTQMKAHFE 65
F ++H+RK + T +G YLL K R++ +++ ERE E I + + + HFE
Sbjct: 8 FIKRHKRKFIFTGVFVGGVYLLGKYAQ---RKIQEMQ-----EREAAEYIAQARRQFHFE 59
Query: 66 SIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILSFT 125
S Q + T L + L I ++ + L P KL++W++LKI+SFT
Sbjct: 60 SNQRTCNMTVLS-MLPTLREAIIHHLNSESLTTLLKT-----KPANKLEIWEDLKIISFT 113
Query: 126 RMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSSAD 185
R +++++S ML + +RVQ+NI+G +LY+D + L D+ +Q++LSS
Sbjct: 114 RSIVAVYSTCMLVVLLRVQLNIIGGYLYLDNSVTKNGMTPLAPPDV-----QQQYLSSIQ 168
Query: 186 FLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYL 245
L+ + LI+ ++ + +EV LK ++ + L++ + QI + S + + +
Sbjct: 169 HLLGEGLMELITVVKKAVQEVFGLVSLKQSLSLQELEQQLTQIRQLVEDDSSKYKGLSWY 228
Query: 246 MMP-QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK----CFTDVLV 300
MMP ++ L+ ++ V+ +L+ ETR++L S +F ++ L F D +
Sbjct: 229 MMPDEENTLASQACGLTENDVTTI-KLLNETRDMLESPDFNIVLHTCLNRGFVRFLDNMA 287
Query: 301 E--------EMETQTEAGGLATGKPLAKVLPQIEKTMNVITAE-PSKNRFLQIIRDLPEV 351
E + T PLAK++P I ++ I +E PS F+Q + + +V
Sbjct: 288 EFFRPPQRDSTPSSTPDQLSHVSLPLAKIIPIINGQIHSICSEIPS--HFVQDLLLIDQV 345
Query: 352 KLFFTLLY 359
K F +Y
Sbjct: 346 KEFAANVY 353
>gi|125846558|ref|XP_001331521.1| PREDICTED: hypothetical protein [Danio rerio]
gi|55962647|emb|CAI11651.1| novel protein similar to vertebrate peroxisomal biogenesis factor 3
(PEX3) (zgc:56313) [Danio rerio]
Length = 364
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 99/368 (26%), Positives = 180/368 (48%), Gaps = 37/368 (10%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEII-KTQMKAHFE 65
F ++H+RK + T +G YLL K R++ +++ ERE E I + + + HFE
Sbjct: 8 FIKRHKRKFIFTGVFVGGVYLLGKYAQ---RKIQEMQ-----EREAAEYIAQARRQFHFE 59
Query: 66 SIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILSFT 125
S Q + T L ++R E + H+ P KL++W++LKI+SFT
Sbjct: 60 SNQRTCNMTVLS---MLPTLR---EAIIHHLNSESLTALLKTKPANKLEIWEDLKIISFT 113
Query: 126 RMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSSAD 185
R +++++S ML + +RVQ+NI+G +LY+D + L D+ +Q++LSS
Sbjct: 114 RSIVAVYSTCMLVVLLRVQLNIIGGYLYLDNSVTKNGMTPLAPPDV-----QQQYLSSIQ 168
Query: 186 FLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYL 245
L+ + LI+ ++ + +EV LK ++ + L++ + QI + S + + +
Sbjct: 169 HLLGEGLMELITVVKKAVQEVFGLVSLKQSLSLQELEQQLTQIRQLVEDDSSKYKSLSWY 228
Query: 246 MMP-QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK----CFTDVLV 300
MMP ++ L+ ++ V+ +L+ ETR++L S +F ++ L F D +
Sbjct: 229 MMPDEENTLASQACGLTENDVTTI-KLLNETRDMLESPDFNIVLHTCLNRGFVRFLDNMA 287
Query: 301 E--------EMETQTEAGGLATGKPLAKVLPQIEKTMNVITAE-PSKNRFLQIIRDLPEV 351
E + T PLAK++P I ++ I +E PS F+Q + + +V
Sbjct: 288 EFFRPPQRDSTPSSTPDQLSHVSLPLAKIIPIINGQIHSICSEIPS--HFVQDLLLIDQV 345
Query: 352 KLFFTLLY 359
K F +Y
Sbjct: 346 KEFAANVY 353
>gi|12230450|sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
gi|8926877|dbj|BAA97994.1| Pex3p [Cricetulus longicaudatus]
Length = 373
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 93/378 (24%), Positives = 185/378 (48%), Gaps = 48/378 (12%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + LG Y+L K R + ERE A + I + + + HFES
Sbjct: 8 FLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYHFES 60
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E + + +R P KL++W++LKI+S
Sbjct: 61 NQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A + + L D +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNGTTV----LAPPDVQQQYLSS 167
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVD 243
L+ + + L++ ++ + + +L LK ++ L++ + +I + SP W+D
Sbjct: 168 IQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHRSP-SWID 226
Query: 244 ----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK 293
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 227 KDVSKSSLCQYMMPDEETPLAAQAYGLSPRDITTI-KLLNETRDMLESPDFSTVLNTCLN 285
Query: 294 CFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
L++ M E + G + PLAK++P + ++ + ++ + + F
Sbjct: 286 RGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSD-TPSHF 344
Query: 342 LQIIRDLPEVKLFFTLLY 359
+Q + + +VK F +Y
Sbjct: 345 VQDLLMMEQVKDFAANVY 362