BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= AT3G04460__[Arabidopsis_thaliana]
(393 letters)
Database: nr.pal
6,348,806 sequences; 2,166,943,470 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42563493|ref|NP_187096.2| APM4/ATPEX12/PEX12 (PEROXIN-12... 742 0.0
gi|12585318|sp|Q9M841|PEX12_ARATH Putative peroxisome assem... 670 0.0
gi|157352808|emb|CAO44650.1| unnamed protein product [Vitis... 577 e-163
gi|115482432|ref|NP_001064809.1| Os10g0467200 [Oryza sativa... 517 e-145
gi|13489174|gb|AAK27808.1|AC022457_11 putative peroxin [Ory... 461 e-128
gi|125575090|gb|EAZ16374.1| hypothetical protein OsJ_030583... 457 e-127
gi|125532292|gb|EAY78857.1| hypothetical protein OsI_032816... 454 e-126
gi|168008808|ref|XP_001757098.1| predicted protein [Physcom... 387 e-105
gi|26450380|dbj|BAC42305.1| unknown protein [Arabidopsis th... 298 4e-79
gi|147852355|emb|CAN80121.1| hypothetical protein [Vitis vi... 207 1e-51
gi|145342563|ref|XP_001416251.1| predicted protein [Ostreoc... 169 2e-40
gi|159476394|ref|XP_001696296.1| predicted protein [Chlamyd... 150 1e-34
gi|115754763|ref|XP_788130.2| PREDICTED: similar to peroxin... 149 3e-34
gi|156392006|ref|XP_001635840.1| predicted protein [Nematos... 143 3e-32
gi|114668062|ref|XP_001174172.1| PREDICTED: peroxisomal bio... 138 8e-31
gi|4505721|ref|NP_000277.1| peroxisomal biogenesis factor 1... 135 4e-30
gi|149724040|ref|XP_001503983.1| PREDICTED: hypothetical pr... 135 6e-30
gi|66808761|ref|XP_638103.1| RING Zn finger-containing prot... 135 7e-30
gi|134085809|ref|NP_001076847.1| peroxisomal biogenesis fac... 133 2e-29
gi|57091801|ref|XP_548259.1| PREDICTED: similar to Peroxiso... 133 2e-29
gi|16758802|ref|NP_446373.1| peroxisomal biogenesis factor ... 132 5e-29
gi|90076322|dbj|BAE87841.1| unnamed protein product [Macaca... 131 8e-29
gi|116058518|emb|CAL53707.1| PEXC_ARATH Putative peroxisome... 131 9e-29
gi|74151248|dbj|BAE38761.1| unnamed protein product [Mus mu... 131 1e-28
gi|19527244|ref|NP_598786.1| peroxisomal biogenesis factor ... 130 1e-28
gi|148683752|gb|EDL15699.1| peroxisomal biogenesis factor 1... 130 1e-28
gi|28380110|sp|Q9ET67|PEX12_CRILO Peroxisome assembly prote... 130 2e-28
gi|170087062|ref|XP_001874754.1| predicted protein [Laccari... 123 3e-26
gi|164659278|ref|XP_001730763.1| hypothetical protein MGL_1... 122 7e-26
gi|118100173|ref|XP_415773.2| PREDICTED: similar to peroxin... 115 7e-24
gi|17551466|ref|NP_509908.1| PeRoXisome assembly factor fam... 112 5e-23
gi|73966811|ref|XP_867848.1| PREDICTED: similar to Peroxiso... 108 6e-22
gi|37362262|gb|AAQ91259.1| peroxisomal biogenesis factor 12... 107 2e-21
gi|148230394|ref|NP_001086511.1| peroxisomal biogenesis fac... 104 9e-21
gi|169146283|emb|CAQ13764.1| novel protein (zgc:56182) [Dan... 104 1e-20
gi|157768368|ref|XP_001676005.1| Hypothetical protein CBG17... 103 2e-20
gi|71003556|ref|XP_756444.1| hypothetical protein UM00297.1... 103 2e-20
gi|50551703|ref|XP_503326.1| hypothetical protein [Yarrowia... 103 2e-20
gi|126313957|ref|XP_001373562.1| PREDICTED: hypothetical pr... 100 2e-19
gi|47216261|emb|CAG05957.1| unnamed protein product [Tetrao... 92 4e-17
gi|169861548|ref|XP_001837408.1| hypothetical protein CC1G_... 91 2e-16
gi|46136481|ref|XP_389932.1| hypothetical protein FG09756.1... 86 4e-15
gi|157113458|ref|XP_001657838.1| hypothetical protein AaeL_... 85 1e-14
gi|118142838|gb|AAH15751.1| PEX12 protein [Homo sapiens] 84 1e-14
gi|71002658|ref|XP_756010.1| peroxisome biosynthesis protei... 83 3e-14
gi|170575660|ref|XP_001893329.1| Pex2 / Pex12 amino termina... 82 1e-13
gi|169611676|ref|XP_001799256.1| hypothetical protein SNOG_... 81 1e-13
gi|158293130|ref|XP_001237561.2| AGAP010497-PA [Anopheles g... 81 2e-13
gi|121716920|ref|XP_001275951.1| peroxisome biosynthesis pr... 80 3e-13
gi|119482223|ref|XP_001261140.1| peroxisome biosynthesis pr... 78 9e-13
gi|170045706|ref|XP_001850439.1| peroxisome assembly protei... 77 3e-12
gi|77927354|gb|ABB05507.1| PEX12 [Trypanosoma brucei] 75 1e-11
gi|71749432|ref|XP_828055.1| peroxisome assembly protein [T... 75 1e-11
gi|39952257|ref|XP_363845.1| hypothetical protein MGG_01771... 73 3e-11
gi|169775833|ref|XP_001822383.1| [Aspergillus oryzae] >gi|8... 72 8e-11
gi|41055606|ref|NP_956499.1| peroxisomal biogenesis factor ... 69 5e-10
gi|21616272|gb|AAM66157.1|AF333026_1 peroxin 12 [Pichia ang... 69 7e-10
gi|146084720|ref|XP_001465084.1| peroxisome assembly protei... 69 8e-10
gi|67900638|ref|XP_680575.1| hypothetical protein AN7306.2 ... 69 9e-10
gi|154336010|ref|XP_001564241.1| peroxisome assembly protei... 68 1e-09
gi|2501733|sp|Q01961|PEX12_PICPA Peroxisome assembly protei... 67 2e-09
gi|116196536|ref|XP_001224080.1| hypothetical protein CHGG_... 67 3e-09
gi|111609727|gb|ABH11419.1| peroxin 12 [Penicillium chrysog... 67 3e-09
gi|157868310|ref|XP_001682708.1| peroxisome assembly protei... 66 5e-09
gi|85105638|ref|XP_962009.1| hypothetical protein NCU05245 ... 65 7e-09
gi|24580706|ref|NP_608546.1| CG3639 CG3639-PA [Drosophila m... 65 8e-09
gi|119175078|ref|XP_001239827.1| hypothetical protein CIMG_... 64 1e-08
gi|125985951|ref|XP_001356739.1| GA17579-PA [Drosophila pse... 62 5e-08
gi|145258974|ref|XP_001402232.1| hypothetical protein An04g... 62 5e-08
gi|58261662|ref|XP_568241.1| hypothetical protein [Cryptoco... 62 7e-08
gi|134115359|ref|XP_773641.1| hypothetical protein CNBI0070... 62 7e-08
gi|146414013|ref|XP_001482977.1| hypothetical protein PGUG_... 62 7e-08
gi|68472786|ref|XP_719458.1| peroxisomal import complex pro... 62 9e-08
gi|156842023|ref|XP_001644381.1| hypothetical protein Kpol_... 61 1e-07
gi|68472535|ref|XP_719586.1| peroxisomal import complex pro... 61 2e-07
gi|71652088|ref|XP_814708.1| peroxisome assembly protein, p... 60 2e-07
gi|118363092|ref|XP_001014587.1| Pex2 / Pex12 amino termina... 60 3e-07
gi|114650316|ref|XP_001136253.1| PREDICTED: similar to pero... 60 3e-07
gi|151946187|gb|EDN64418.1| C3HC4 zinc-binding integral per... 60 3e-07
gi|6323668|ref|NP_013739.1| C3HC4-type RING-finger peroxiso... 60 4e-07
gi|154276132|ref|XP_001538911.1| conserved hypothetical pro... 59 4e-07
gi|51013583|gb|AAT93085.1| YMR026C [Saccharomyces cerevisiae] 59 7e-07
gi|149248508|ref|XP_001528641.1| conserved hypothetical pro... 59 8e-07
gi|66531726|ref|XP_624974.1| PREDICTED: similar to peroxiso... 58 1e-06
gi|150864111|ref|XP_001382813.2| hypothetical protein PICST... 57 2e-06
gi|156547303|ref|XP_001601571.1| PREDICTED: similar to cons... 57 2e-06
gi|50294524|ref|XP_449673.1| hypothetical protein CAGL0M074... 57 2e-06
gi|91085407|ref|XP_967344.1| PREDICTED: similar to Peroxiso... 57 2e-06
gi|50405519|ref|XP_456395.1| hypothetical protein DEHA0A016... 54 2e-05
gi|67992724|ref|NP_001018219.1| ubiquitin-protein ligase E3... 47 0.003
gi|115473293|ref|NP_001060245.1| Os07g0608800 [Oryza sativa... 45 0.008
gi|45185296|ref|NP_983013.1| ABR067Cp [Ashbya gossypii ATCC... 44 0.026
gi|70987208|ref|XP_749083.1| peroxisome biosynthesis protei... 42 0.056
gi|159123146|gb|EDP48266.1| peroxisome biosynthesis protein... 42 0.057
gi|119482640|ref|XP_001261348.1| peroxisome biosynthesis pr... 42 0.057
gi|168057684|ref|XP_001780843.1| predicted protein [Physcom... 42 0.061
gi|145479889|ref|XP_001425967.1| hypothetical protein GSPAT... 42 0.070
gi|116054762|emb|CAL56839.1| Pex10p (ISS) [Ostreococcus tauri] 42 0.070
gi|67539022|ref|XP_663285.1| hypothetical protein AN5681.2 ... 42 0.082
gi|121711301|ref|XP_001273266.1| peroxisome biosynthesis pr... 42 0.089
>gi|42563493|ref|NP_187096.2| APM4/ATPEX12/PEX12 (PEROXIN-12) [Arabidopsis thaliana]
Length = 393
Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats.
Identities = 372/393 (94%), Positives = 372/393 (94%)
Query: 1 MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60
MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM
Sbjct: 1 MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60
Query: 61 LILEGHSLRTTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVF 120
LILEGHSLRTTDGSFAESLYG DSARKDSSEEVQHSGLEKRQRILSVVF
Sbjct: 61 LILEGHSLRTTDGSFAESLYGLRRKSARLRLRKDSARKDSSEEVQHSGLEKRQRILSVVF 120
Query: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSV 180
LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSV
Sbjct: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSV 180
Query: 181 RVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQE 240
RVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQE
Sbjct: 181 RVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQE 240
Query: 241 LMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWW 300
LMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWW
Sbjct: 241 LMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWW 300
Query: 301 YQSAEERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFC 360
YQSAEERLSAPTVY KMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFC
Sbjct: 301 YQSAEERLSAPTVYPPPPPPPAPKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFC 360
Query: 361 YSCVFKYVSKYKRCPVTLIPASVDQIRRLFQDT 393
YSCVFKYVSKYKRCPVTLIPASVDQIRRLFQDT
Sbjct: 361 YSCVFKYVSKYKRCPVTLIPASVDQIRRLFQDT 393
>gi|12585318|sp|Q9M841|PEX12_ARATH Putative peroxisome assembly protein 12 (Peroxin-12)
gi|7547105|gb|AAF63777.1| unknown protein [Arabidopsis thaliana]
Length = 372
Score = 670 bits (1728), Expect = 0.0, Method: Composition-based stats.
Identities = 347/397 (87%), Positives = 347/397 (87%), Gaps = 29/397 (7%)
Query: 1 MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60
MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM
Sbjct: 1 MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60
Query: 61 LILEGHSLRTTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVF 120
LILEGHSLRTTDGSFAESLYG DSARKDSSEEVQHSGLEKRQRILSVVF
Sbjct: 61 LILEGHSLRTTDGSFAESLYGLRRKSARLRLRKDSARKDSSEEVQHSGLEKRQRILSVVF 120
Query: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSV 180
LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSV
Sbjct: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSV 180
Query: 181 RVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQE 240
RVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQE
Sbjct: 181 RVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQE 240
Query: 241 LMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWW 300
L TVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWW
Sbjct: 241 L-------------------------TVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWW 275
Query: 301 YQSAEERLSAPTVYXXXXXXXXXK----MAKEGIPLPPDRSLCALCLQKRANPSVVTVSG 356
YQSAEERLSAPTVY K MAKEGIPLPPDRSLCALCLQKRANPSVVTVSG
Sbjct: 276 YQSAEERLSAPTVYPPPPPPPAPKVINQMAKEGIPLPPDRSLCALCLQKRANPSVVTVSG 335
Query: 357 FVFCYSCVFKYVSKYKRCPVTLIPASVDQIRRLFQDT 393
FVFCYSCVFKYVSKYKRCPVTLIPASVDQIRRLFQDT
Sbjct: 336 FVFCYSCVFKYVSKYKRCPVTLIPASVDQIRRLFQDT 372
>gi|157352808|emb|CAO44650.1| unnamed protein product [Vitis vinifera]
Length = 393
Score = 577 bits (1487), Expect = e-163, Method: Composition-based stats.
Identities = 277/392 (70%), Positives = 322/392 (82%)
Query: 1 MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60
MLFQVGG+G RPTFFEM+AAQQLPASLRAALTYS+GV ALRR FLH++LDYEDEFFA LM
Sbjct: 1 MLFQVGGQGARPTFFEMSAAQQLPASLRAALTYSIGVLALRRPFLHRVLDYEDEFFALLM 60
Query: 61 LILEGHSLRTTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVF 120
L+LE HSLRTTD SF+ESLYG D+ DSS+ + HSGLEK Q+ LSV+F
Sbjct: 61 LVLESHSLRTTDASFSESLYGLRRRAVRIRVKKDNTLSDSSDVIHHSGLEKYQKRLSVLF 120
Query: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSV 180
LVVLPYFKSKLH++YNKEREA L+ SLWG D+ FD+AD+F+ + + + + E+SV
Sbjct: 121 LVVLPYFKSKLHSVYNKEREATLQASLWGHGDERFDDADYFSEERGSLIPTRASDVEVSV 180
Query: 181 RVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQE 240
R +L + +KFI + YPW+HA +EGLSF YQLLYLLDATGFYSLGL ALGI VCRATGQE
Sbjct: 181 RARLTKRFQKFIGIFYPWLHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE 240
Query: 241 LMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWW 300
LMDTSSRISKIR+ ER+RLRGPPWLK +QGALLSC+Y +LDYAQTGLIAAVF FKMMEWW
Sbjct: 241 LMDTSSRISKIRSRERDRLRGPPWLKALQGALLSCTYTMLDYAQTGLIAAVFFFKMMEWW 300
Query: 301 YQSAEERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFC 360
YQSAEER+SAPTVY K+AKEGIPLP DR++C LC QKR NPSVV VSGFVFC
Sbjct: 301 YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPSDRTICPLCSQKRTNPSVVAVSGFVFC 360
Query: 361 YSCVFKYVSKYKRCPVTLIPASVDQIRRLFQD 392
Y+C+FKYVS+YKRCP+TL+ A+VDQIRRLF D
Sbjct: 361 YACIFKYVSQYKRCPITLMLANVDQIRRLFHD 392
>gi|115482432|ref|NP_001064809.1| Os10g0467200 [Oryza sativa (japonica cultivar-group)]
gi|78708797|gb|ABB47772.1| Pex2/Pex12 amino terminal region family protein, expressed [Oryza
sativa (japonica cultivar-group)]
gi|113639418|dbj|BAF26723.1| Os10g0467200 [Oryza sativa (japonica cultivar-group)]
Length = 394
Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats.
Identities = 264/394 (67%), Positives = 308/394 (78%), Gaps = 3/394 (0%)
Query: 1 MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60
MLFQVGG+G RPTFFEM+AAQQLPASLRAAL+YSLGVFALRR LHK+LDYEDEFFA LM
Sbjct: 1 MLFQVGGQGARPTFFEMSAAQQLPASLRAALSYSLGVFALRRPLLHKVLDYEDEFFALLM 60
Query: 61 LILEGHSLRTTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVF 120
+LE HSLRTTDGSF+ESLYG S+ +S+++ S L KRQ++LSVVF
Sbjct: 61 AVLESHSLRTTDGSFSESLYGLRRRPVKVSVKRSSSGAESNDKAYDSVLRKRQKVLSVVF 120
Query: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFT--GDDSIVSREPSGNEEL 178
LVVLPYFKSKL +IYNKEREARL+ SLWG D FDEAD + G+ S E + E +
Sbjct: 121 LVVLPYFKSKLQSIYNKEREARLQASLWGQGDVRFDEADLVSDQGETSQAQVEATTGE-V 179
Query: 179 SVRVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATG 238
S ++ I VCYPWIHA++EGLSF YQLLYLLD T FYS L ALG+ VCRATG
Sbjct: 180 SNMARIKKNFAALIGVCYPWIHATNEGLSFAYQLLYLLDGTAFYSPALHALGLHVCRATG 239
Query: 239 QELMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMME 298
QELM++SSR+S+IRN E ERLRGPPWLKT+Q LL+C Y LDYAQTGLIAAVF FKMME
Sbjct: 240 QELMESSSRVSRIRNRELERLRGPPWLKTMQRVLLNCMYTSLDYAQTGLIAAVFFFKMME 299
Query: 299 WWYQSAEERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFV 358
WWYQSAEER+SAPTVY K+AK+G+PLPPDR+LC LC QKR NPSV++ SGFV
Sbjct: 300 WWYQSAEERMSAPTVYPPPPPPPLPKVAKDGLPLPPDRTLCPLCCQKRNNPSVLSASGFV 359
Query: 359 FCYSCVFKYVSKYKRCPVTLIPASVDQIRRLFQD 392
FCYSC+FK VS++KRCP+TL+PA+V+QIRRLF D
Sbjct: 360 FCYSCIFKSVSQHKRCPITLMPATVEQIRRLFHD 393
>gi|13489174|gb|AAK27808.1|AC022457_11 putative peroxin [Oryza sativa (japonica cultivar-group)]
Length = 369
Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats.
Identities = 245/394 (62%), Positives = 285/394 (72%), Gaps = 28/394 (7%)
Query: 1 MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60
MLFQVGG+G RPTFFEM+AAQQLPASLRAAL+YSLGVFALRR LHK+LDYEDEFFA LM
Sbjct: 1 MLFQVGGQGARPTFFEMSAAQQLPASLRAALSYSLGVFALRRPLLHKVLDYEDEFFALLM 60
Query: 61 LILEGHSLRTTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVF 120
+LE HSLRTTDGSF+ESLYG S+ +S+++ S L KRQ++LSVVF
Sbjct: 61 AVLESHSLRTTDGSFSESLYGLRRRPVKVSVKRSSSGAESNDKAYDSVLRKRQKVLSVVF 120
Query: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFT--GDDSIVSREPSGNEEL 178
LVVLPYFKSKL +IYNKEREARL+ SLWG D FDEAD + G+ S E + E+
Sbjct: 121 LVVLPYFKSKLQSIYNKEREARLQASLWGQGDVRFDEADLVSDQGETSQAQVEATTG-EV 179
Query: 179 SVRVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATG 238
S ++ I VCYPWIHA++EGLSF YQLLYLLD T FYS L ALG+ VCRATG
Sbjct: 180 SNMARIKKNFAALIGVCYPWIHATNEGLSFAYQLLYLLDGTAFYSPALHALGLHVCRATG 239
Query: 239 QELMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMME 298
QEL T+Q LL+C Y LDYAQTGLIAAVF FKMME
Sbjct: 240 QEL-------------------------TMQRVLLNCMYTSLDYAQTGLIAAVFFFKMME 274
Query: 299 WWYQSAEERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFV 358
WWYQSAEER+SAPTVY K+AK+G+PLPPDR+LC LC QKR NPSV++ SGFV
Sbjct: 275 WWYQSAEERMSAPTVYPPPPPPPLPKVAKDGLPLPPDRTLCPLCCQKRNNPSVLSASGFV 334
Query: 359 FCYSCVFKYVSKYKRCPVTLIPASVDQIRRLFQD 392
FCYSC+FK VS++KRCP+TL+PA+V+QIRRLF D
Sbjct: 335 FCYSCIFKSVSQHKRCPITLMPATVEQIRRLFHD 368
>gi|125575090|gb|EAZ16374.1| hypothetical protein OsJ_030583 [Oryza sativa (japonica
cultivar-group)]
Length = 546
Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats.
Identities = 236/361 (65%), Positives = 274/361 (75%), Gaps = 3/361 (0%)
Query: 17 MAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALMLILEGHSLRTTDGSFA 76
M+AAQQLPASLRAAL+YSLGVFALRR LHK+LDYEDEFFA LM +LE HSLRTTDGSF+
Sbjct: 1 MSAAQQLPASLRAALSYSLGVFALRRPLLHKVLDYEDEFFALLMAVLESHSLRTTDGSFS 60
Query: 77 ESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFKSKLHAIYN 136
ESLYG S+ +S+++ S L KRQ++LSVVFLVVLPYFKSKL +IYN
Sbjct: 61 ESLYGLRRRPVKVSVKRSSSGAESNDKAYDSVLRKRQKVLSVVFLVVLPYFKSKLQSIYN 120
Query: 137 KEREARLRESLWGAEDQGFDEADFFT--GDDSIVSREPSGNEELSVRVQLATKIKKFIAV 194
KEREARL+ SLWG D FDEAD + G+ S E + E +S ++ I V
Sbjct: 121 KEREARLQASLWGQGDVRFDEADLVSDQGETSQAQVEATTGE-VSNMARIKKNFAALIGV 179
Query: 195 CYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSSRISKIRNH 254
CYPWIHA++EGLSF YQLLYLLD T FYS L ALG+ VCRATGQELM++SSR+S+IRN
Sbjct: 180 CYPWIHATNEGLSFAYQLLYLLDGTAFYSPALHALGLHVCRATGQELMESSSRVSRIRNR 239
Query: 255 ERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWYQSAEERLSAPTVY 314
E ERLRGPPWLKT+Q LL+C Y LDYAQTGLIAAVF FKMMEWWYQSAEER+SAPTVY
Sbjct: 240 ELERLRGPPWLKTMQRVLLNCMYTSLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVY 299
Query: 315 XXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYSCVFKYVSKYKRC 374
K+AK+G+PLPPDR+LC LC QKR NPSV++ SGFVFCYSC+FK VS+ K
Sbjct: 300 PPPPPPPLPKVAKDGLPLPPDRTLCPLCCQKRNNPSVLSASGFVFCYSCIFKSVSQSKPK 359
Query: 375 P 375
P
Sbjct: 360 P 360
>gi|125532292|gb|EAY78857.1| hypothetical protein OsI_032816 [Oryza sativa (indica
cultivar-group)]
Length = 570
Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats.
Identities = 234/356 (65%), Positives = 272/356 (76%), Gaps = 3/356 (0%)
Query: 17 MAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALMLILEGHSLRTTDGSFA 76
M+AAQQLPASLRAAL+YSLGVFALRR LHK+LDYEDEFFA LM +LE HSLRTTDGSF+
Sbjct: 1 MSAAQQLPASLRAALSYSLGVFALRRPLLHKVLDYEDEFFALLMAVLESHSLRTTDGSFS 60
Query: 77 ESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFKSKLHAIYN 136
ESLYG S+ +S+++ S L KRQ++LSVVFLVVLPYFKSKL +IYN
Sbjct: 61 ESLYGLRRRPVKVSVKRSSSGAESNDKAYDSVLRKRQKVLSVVFLVVLPYFKSKLQSIYN 120
Query: 137 KEREARLRESLWGAEDQGFDEADFFT--GDDSIVSREPSGNEELSVRVQLATKIKKFIAV 194
KEREARL+ SLWG D FDEAD + G+ S E + E +V ++ I V
Sbjct: 121 KEREARLQASLWGQGDVRFDEADLVSDQGETSQAQVEATTGEVSNV-ARIKKNFAALIGV 179
Query: 195 CYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSSRISKIRNH 254
CYPWIHA++EGLSF YQLLYLLD T FYS L ALG+ VCRATGQELM++SSR+S+IRN
Sbjct: 180 CYPWIHATNEGLSFAYQLLYLLDGTAFYSPALHALGLHVCRATGQELMESSSRVSRIRNR 239
Query: 255 ERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWYQSAEERLSAPTVY 314
E ERLRGPPWLKT+Q LL+C Y LDYAQTGLIAAVF FKMMEWWYQSAEER+SAPTVY
Sbjct: 240 ELERLRGPPWLKTMQRVLLNCMYTSLDYAQTGLIAAVFFFKMMEWWYQSAEERMSAPTVY 299
Query: 315 XXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYSCVFKYVSK 370
K+AK+G+PLPPDR+LC LC QKR NPSV++ SGFVFCYSC+FK VS+
Sbjct: 300 PPPPPPPLPKVAKDGLPLPPDRTLCPLCCQKRNNPSVLSASGFVFCYSCIFKSVSQ 355
>gi|168008808|ref|XP_001757098.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691596|gb|EDQ77957.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 394
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 200/395 (50%), Positives = 255/395 (64%), Gaps = 5/395 (1%)
Query: 1 MLFQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALM 60
ML QVGG+G RPTFFEM+A + LP SLRAAL Y LGV A RR LH++LD+ DE +AALM
Sbjct: 1 MLMQVGGDGARPTFFEMSATEHLPTSLRAALLYFLGVMAQRRPILHRVLDFSDEGYAALM 60
Query: 61 LILEGHSLRTTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVF 120
+LE HSL+TTD SFAESLYG + SS + L +QR SV F
Sbjct: 61 FLLEFHSLKTTDSSFAESLYGLRRIPATDALPQQQGPQASSPGPRP--LTGKQRAASVFF 118
Query: 121 LVVLPYFKSKLHAIYNKEREARLRESLWGA---EDQGFDEADFFTGDDSIVSREPSGNEE 177
LV LPY K KL A N +R L+ +LWG ED+ D + D++ + +
Sbjct: 119 LVGLPYLKYKLEAAVNAQRGDALQAALWGRGDLEDEDVDSMEPPREVDNVHNEQVFFGSG 178
Query: 178 LSVRVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRAT 237
R + + + CYPW+HA++EG+SF YQLLYLLDAT FY+ L +G+QV RAT
Sbjct: 179 TPWRERFKHIAIRALVKCYPWVHAATEGVSFAYQLLYLLDATRFYTPALHFMGLQVRRAT 238
Query: 238 GQELMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMM 297
GQELMD I + R HE R+RGP +++T+Q +L Y LDYAQTGLIA+VF+FKM+
Sbjct: 239 GQELMDAVKVIEERRQHEFGRIRGPSYIQTLQRGVLRFIYTALDYAQTGLIASVFLFKMV 298
Query: 298 EWWYQSAEERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGF 357
EWWYQSAEER++AP VY + K+G+ LP D +C LCL+ R NP+VV SGF
Sbjct: 299 EWWYQSAEERVTAPAVYPPPPPPPPPVVGKDGLQLPADGKICPLCLRSRTNPAVVATSGF 358
Query: 358 VFCYSCVFKYVSKYKRCPVTLIPASVDQIRRLFQD 392
VFCY+C F YV++YKRCPVTL P + +QI RL+QD
Sbjct: 359 VFCYTCAFHYVTQYKRCPVTLAPTATNQILRLYQD 393
>gi|26450380|dbj|BAC42305.1| unknown protein [Arabidopsis thaliana]
Length = 152
Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats.
Identities = 143/152 (94%), Positives = 143/152 (94%)
Query: 242 MDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWY 301
MDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWY
Sbjct: 1 MDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWY 60
Query: 302 QSAEERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCY 361
QSAEERLSAPTVY KMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCY
Sbjct: 61 QSAEERLSAPTVYPPPPPPPAPKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCY 120
Query: 362 SCVFKYVSKYKRCPVTLIPASVDQIRRLFQDT 393
SCVFKYVSKYKRCPVTLIPASVDQIRRLFQDT
Sbjct: 121 SCVFKYVSKYKRCPVTLIPASVDQIRRLFQDT 152
>gi|147852355|emb|CAN80121.1| hypothetical protein [Vitis vinifera]
Length = 208
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 101/170 (59%), Positives = 125/170 (73%)
Query: 72 DGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFKSKL 131
D SF+ESLYG D+ DSS+ + HSGLEK Q+ LSV+FLVVLPYFKSKL
Sbjct: 13 DASFSESLYGLRRRAVRIRVKKDNTLSDSSDVIHHSGLEKYQKRLSVLFLVVLPYFKSKL 72
Query: 132 HAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQLATKIKKF 191
H++YNKEREA L+ SLWG D+ FD+AD+F+ + + + + E+SVR +L + +KF
Sbjct: 73 HSVYNKEREATLQASLWGHGDERFDDADYFSEERGSLIPTRASDVEVSVRARLTKRFQKF 132
Query: 192 IAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQEL 241
I + YPW+HA +EGLSF YQLLYLLDATGFYSLGL ALGI VCRATGQEL
Sbjct: 133 IGIFYPWLHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQEL 182
>gi|145342563|ref|XP_001416251.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576476|gb|ABO94544.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 433
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 133/403 (33%), Positives = 188/403 (46%), Gaps = 47/403 (11%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRRS--FLHKILDYEDEFFAALMLILEGHSL 68
RPTFFE+ AA++L SL+ AL Y+LG A + F H LD DE FAAL + E S
Sbjct: 52 RPTFFELIAAERLAPSLKGALAYALGTLANAGAPGFAHYALDRGDEVFAALTFLAELKSF 111
Query: 69 RTTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSG---LEKRQRILSVVFLVVLP 125
+ DGS AES+YG R + V+ G ++ QRI+S L + P
Sbjct: 112 ASGDGSLAESVYGLQRV----------PRTLTDARVRRDGRYRIDAWQRIMSAALLALGP 161
Query: 126 YFKSKLHAIYN----------KEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGN 175
Y +SK A++ + R R+ +S A+D G E + +R G
Sbjct: 162 YARSKAAALHETLAPECYLDARRRAPRVFDS--NADDMGVREGAEANAAAVVAARNAEGG 219
Query: 176 EELSVRVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCR 235
+ + F+A YP +A E +F YLL L + V R
Sbjct: 220 ARGVAK-------RAFVAA-YPVANALVEAATFVTWTGYLLGRWNINDPTLMLVDCYVVR 271
Query: 236 ATGQELMDTSSRISKIRNHERERLRGPPWLKTVQ------GALLSCSYAVLDYAQTGLIA 289
A EL + + R + +L G K GAL + ++ V+DYAQ+ LIA
Sbjct: 272 ALPSELEANARELEGSR---QRQLAGAHASKNAATRALSVGALKTKNF-VMDYAQSALIA 327
Query: 290 AVFIFKMMEWWYQSAEERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANP 349
AV FK+ EWWY +AEER+ T GI LP + LC LC + NP
Sbjct: 328 AVIGFKLTEWWYGAAEERVVNATTLPVPPPPPRPPPHPNGIALPENTDLCPLCRKVIRNP 387
Query: 350 SVVTVSGFVFCYSCVFKYVSKYKRCPVTLIPA--SVDQIRRLF 390
+V+T SG+VFCY+C++ +V +Y CPV+ A VD IRR++
Sbjct: 388 AVLTSSGYVFCYACLYAHVDRYGDCPVSCHRAFNGVDDIRRIY 430
>gi|159476394|ref|XP_001696296.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282521|gb|EDP08273.1| predicted protein [Chlamydomonas reinhardtii]
Length = 722
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 118/398 (29%), Positives = 178/398 (44%), Gaps = 118/398 (29%)
Query: 1 MLFQVGG-EGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAAL 59
M +GG E ++PT+FE+ AA +L SL+AA+ Y+L VF+ R+ ++H++L+Y+DE FA L
Sbjct: 1 MFVNLGGDESSKPTYFEVVAADRLVPSLKAAVIYALSVFSQRQPWVHRLLNYDDEVFALL 60
Query: 60 MLILEGHSLRTTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVV 119
L L+GHSL +TD +F++SLYG R +S+ L +RQR L +
Sbjct: 61 TLALDGHSLFSTDSTFSDSLYGLKR---------KPLRPGASDR-----LSRRQRWLMLA 106
Query: 120 FLVVLPYFKSKLHAIYNKEREARLRESLWG------AEDQGFDEADFFTGDDSIVSREPS 173
V+LPY ++K +Y + G A EAD G +S V +E
Sbjct: 107 CQVLLPYLRAKTEKVYRHYAATSPGSGVLGLALRYSAAQGSVAEAD--DGGNSGVGQE-- 162
Query: 174 GNEELSVRVQLATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQV 233
+ S R+Q A F+A YPWIHA EG +F Y L YLL A+ + L AL
Sbjct: 163 -DGSWSRRLQRA-----FVA-SYPWIHAGIEGTTFAYHLAYLLGASPAHQPVLHAL---- 211
Query: 234 CRATGQELMDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFI 293
G + TS++ D A
Sbjct: 212 ----GVTMARTSAK---------------------------------DLA---------- 224
Query: 294 FKMMEWWYQSAEERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVT 353
+EWWY +AE+ L+ ++ NP+ +
Sbjct: 225 ---LEWWYTAAEDTLAKG--------------------------------KRTTNPATLA 249
Query: 354 VSGFVFCYSCVFKYVSKYKRCPVTLIPASVDQIRRLFQ 391
SG+VFCY C F +V + RCPV+ + A +D +R+L++
Sbjct: 250 TSGYVFCYPCAFAHVLAHGRCPVSGLGAGLDHVRKLYE 287
>gi|115754763|ref|XP_788130.2| PREDICTED: similar to peroxin 12 [Strongylocentrotus purpuratus]
gi|115974681|ref|XP_001193952.1| PREDICTED: similar to peroxin 12 [Strongylocentrotus purpuratus]
Length = 354
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 115/382 (30%), Positives = 178/382 (46%), Gaps = 49/382 (12%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRR-SFLHKILDYEDEFFAALMLILEGHSLR 69
RP++FE+ A + L +LR AL+Y L VFA + + ++ + DE ++ L LIL+ H L
Sbjct: 16 RPSYFEVLAQESLMVTLRPALSYFLKVFAENQPAQFGRLHRWSDEVYSILDLILQHHFLT 75
Query: 70 TTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFKS 129
T SFAE+ Y SA SE GL KR+ +S+ LVV+PY K
Sbjct: 76 KTSASFAENFYSLKRVAINSST---SAAPSISE-----GLPKREHWMSLALLVVVPYIKL 127
Query: 130 KLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQLATKIK 189
KL A + K W D+ D D G + + K K
Sbjct: 128 KLDAKFQK----------W--TDESLDLND-------------RGRQTMK-------KYK 155
Query: 190 KFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSSRIS 249
K YP++H S E YQL YL + +S L+ G+Q+ + ++++ S +
Sbjct: 156 KIFLALYPYLHLSWESSVLVYQLRYLFKQSPVHSPFLKLAGVQLQYLSKEDMLLGLSSDA 215
Query: 250 KIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWYQSAEERLS 309
+ + R +LK + GA+ + A+ GL VF + +EWWY S + + +
Sbjct: 216 ILSADSSLKARLLYYLKRLVGAV---AIAI----SNGLSVGVFFLQFLEWWYMSEDHQSA 268
Query: 310 -APTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYSCVFKYV 368
A T + I LP D +LC LC +KR N + + SG+VFCY C++ Y+
Sbjct: 269 LAATSLPIPEPPKEREPEYCQILLPRDVTLCPLCQKKRTNDTTLLTSGYVFCYPCIYPYI 328
Query: 369 SKYKRCPVTLIPASVDQIRRLF 390
K +RCPVT P+ + + +L+
Sbjct: 329 KKNQRCPVTRYPSELSHLIKLY 350
>gi|156392006|ref|XP_001635840.1| predicted protein [Nematostella vectensis]
gi|156222938|gb|EDO43777.1| predicted protein [Nematostella vectensis]
Length = 368
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 101/383 (26%), Positives = 172/383 (44%), Gaps = 38/383 (9%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRR-SFLHKILDYEDEFFAALMLILEGHSLR 69
RPT FE+ A + + + LR A+ Y+L + A R L + Y +E + AL L+++ + LR
Sbjct: 16 RPTIFEVIAQESMTSVLRPAVNYALKIIASSRPDRLGWLWRYGEELYTALDLMVQNYFLR 75
Query: 70 TTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFKS 129
GSF+E YG + +S + + L +QR LS++ LVV+PY +
Sbjct: 76 KYGGSFSEHFYGLKRAPCEASHPWTLPVRTTSITAR-TILSDKQRYLSLLALVVVPYLRL 134
Query: 130 KLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQ-LATKI 188
K+ +N+ +E L N S R Q L I
Sbjct: 135 KMDQYFNRLKEENLH-----------------------------ANTAYSPRRQALVLHI 165
Query: 189 KKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSSRI 248
KK + YP++H E YQ+LY+ +S + +G+++ R + ++++
Sbjct: 166 KKILLSVYPFLHCVWESTFLGYQMLYMFSRCDSHSPLVHWIGLKLQRLSKEDIL-----A 220
Query: 249 SKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWYQSA-EER 307
+ G W + L+ + GL VF K MEWWY S +
Sbjct: 221 QVVHKDIFFPFVGKKWKDLIISLPLAIPNILAKMLANGLPLLVFFLKFMEWWYSSENSQT 280
Query: 308 LSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYSCVFKY 367
++ T K A+ G+ LP + C LC + R NP+ ++ G+VFCY C+++Y
Sbjct: 281 VTMVTQLPIPPPPPKPKPAEYGLSLPSHPAQCPLCAKVRTNPTALSTCGYVFCYPCIYRY 340
Query: 368 VSKYKRCPVTLIPASVDQIRRLF 390
+ ++ CPVT +P++ Q+ R++
Sbjct: 341 LGQHGCCPVTHLPSTQQQLVRIY 363
>gi|114668062|ref|XP_001174172.1| PREDICTED: peroxisomal biogenesis factor 12 isoform 1 [Pan
troglodytes]
gi|114668064|ref|XP_523610.2| PREDICTED: peroxisomal biogenesis factor 12 isoform 2 [Pan
troglodytes]
Length = 359
Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats.
Identities = 108/388 (27%), Positives = 169/388 (43%), Gaps = 57/388 (14%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKIL-DYEDEFFAALMLILEGHSLR 69
+P+ FE+ A L ++R AL + + V A + L + DE F L L+L+ H L
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPTHYGFLWRWFDEIFTLLDLLLQQHYLS 76
Query: 70 TTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFKS 129
T SF+E+ YG S+ + +GL K+Q S++FLV+LPY K
Sbjct: 77 RTSASFSENFYGLKRIVM--------GDTHKSQRLASAGLPKQQLWKSIMFLVLLPYLKV 128
Query: 130 KLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQLATKIK 189
KL + + RE +D PS + R LA
Sbjct: 129 KLEKLVSSLRE-----------------------EDEYSIHPPSSRWKRFYRAFLAA--- 162
Query: 190 KFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSSRIS 249
YP+++ + EG QL Y+L +S L+ G+Q+ R T Q++ + +
Sbjct: 163 ------YPFVNMAWEGWFLVQQLRYILGKAQHHSPLLRLAGVQLGRLTVQDIQALEHKPA 216
Query: 250 KIRNHER------ERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWYQS 303
K +R E+++ K V G LS S TGL VF + ++WWY S
Sbjct: 217 KASMMQRPARSVSEKIKSA-LKKAVGGVALSLS--------TGLSVGVFFLQFLDWWYSS 267
Query: 304 A-EERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYS 362
+E + + T + LP +++C LC + R N +V+ SG+VFCY
Sbjct: 268 ENQETIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYR 327
Query: 363 CVFKYVSKYKRCPVTLIPASVDQIRRLF 390
CVF YV ++ CP+T P V + +L+
Sbjct: 328 CVFHYVRSHQACPITGYPTEVQHLIKLY 355
>gi|4505721|ref|NP_000277.1| peroxisomal biogenesis factor 12 [Homo sapiens]
gi|3024371|sp|O00623|PEX12_HUMAN Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome assembly
factor 3) (PAF-3)
gi|1938367|gb|AAC68812.1| peroxin 12 [Homo sapiens]
gi|1938369|gb|AAC68813.1| peroxin 12 [Homo sapiens]
gi|3308973|dbj|BAA31559.1| peroxisome assembly factor-3 (PAF-3) [Homo sapiens]
gi|22658425|gb|AAH31085.1| Peroxisomal biogenesis factor 12 [Homo sapiens]
gi|119600549|gb|EAW80143.1| peroxisomal biogenesis factor 12 [Homo sapiens]
gi|123994893|gb|ABM85048.1| peroxisomal biogenesis factor 12 [synthetic construct]
Length = 359
Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 107/388 (27%), Positives = 168/388 (43%), Gaps = 57/388 (14%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKIL-DYEDEFFAALMLILEGHSLR 69
+P+ FE+ A L ++R AL + + V A + L + DE F L L+L+ H L
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPTHYGFLWRWFDEIFTLLDLLLQQHYLS 76
Query: 70 TTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFKS 129
T SF+E+ YG S+ + +GL K+Q S++FLV+LPY K
Sbjct: 77 RTSASFSENFYGLKRIVM--------GDTHKSQRLASAGLPKQQLWKSIMFLVLLPYLKV 128
Query: 130 KLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQLATKIK 189
KL + + RE +D PS + R LA
Sbjct: 129 KLEKLVSSLRE-----------------------EDEYSIHPPSSRWKRFYRAFLAA--- 162
Query: 190 KFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSSRIS 249
YP+++ + EG QL Y+L +S L+ G+Q+ R T Q++ + +
Sbjct: 163 ------YPFVNMAWEGWFLVQQLRYILGKAQHHSPLLRLAGVQLGRLTVQDIQALEHKPA 216
Query: 250 KIRNHER------ERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWYQS 303
K ++ E++ K V G LS S TGL VF + ++WWY S
Sbjct: 217 KASMMQQPARSVSEKINSA-LKKAVGGVALSLS--------TGLSVGVFFLQFLDWWYSS 267
Query: 304 A-EERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYS 362
+E + + T + LP +++C LC + R N +V+ SG+VFCY
Sbjct: 268 ENQETIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYR 327
Query: 363 CVFKYVSKYKRCPVTLIPASVDQIRRLF 390
CVF YV ++ CP+T P V + +L+
Sbjct: 328 CVFHYVRSHQACPITGYPTEVQHLIKLY 355
>gi|149724040|ref|XP_001503983.1| PREDICTED: hypothetical protein [Equus caballus]
Length = 359
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 107/388 (27%), Positives = 167/388 (43%), Gaps = 57/388 (14%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKIL-DYEDEFFAALMLILEGHSLR 69
+P+ FE+ A L ++R AL + + V A + + DE F L L+L+ H L
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPAHYGFFWRWFDEIFTLLDLLLQQHYLS 76
Query: 70 TTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFKS 129
T SF+E+ YG + + + +GL K+Q SV+FLV+LPY K
Sbjct: 77 KTSASFSENFYGLKRIV--------TGDTHKLQRLASAGLPKKQLWKSVMFLVLLPYLKV 128
Query: 130 KLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQLATKIK 189
KL + + RE +D PS + R LA
Sbjct: 129 KLEKLVSSLRE-----------------------EDEYSIHPPSSRWKRFYRAFLAA--- 162
Query: 190 KFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMD------ 243
YP+++ + EG QL Y+L +S L G+++ R T Q++
Sbjct: 163 ------YPFVNMAWEGWFLVQQLRYILGKAQHHSPLLSLAGVRLGRLTLQDIQSLEHKPA 216
Query: 244 TSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWYQS 303
+SR+ + E+++ K V G LS S TGL VF + +EWWY S
Sbjct: 217 EASRMQQPARSISEKIKSA-LKKAVGGVALSLS--------TGLSVGVFFLQFLEWWYSS 267
Query: 304 A-EERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYS 362
+E + + T + LP +++C LC + R N +V+ SG+VFCY
Sbjct: 268 ENQETIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYR 327
Query: 363 CVFKYVSKYKRCPVTLIPASVDQIRRLF 390
CVF YV ++ CP+T P V + +L+
Sbjct: 328 CVFNYVRSHQACPITGYPTEVQHLIKLY 355
>gi|66808761|ref|XP_638103.1| RING Zn finger-containing protein [Dictyostelium discoideum AX4]
gi|60466547|gb|EAL64599.1| RING Zn finger-containing protein [Dictyostelium discoideum AX4]
Length = 459
Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats.
Identities = 76/210 (36%), Positives = 119/210 (56%), Gaps = 15/210 (7%)
Query: 187 KIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSS 246
K+K YP+I A E L F YQLLYL + T +Y+ IQ+ R + D S
Sbjct: 258 KLKTIFLKVYPFISAIYEALFFIYQLLYLYEYTNYYTPFFHFQNIQLKRLNHK---DIES 314
Query: 247 RISKIRNHERERLRGPPWLKTVQGA-----LLSCSYAVLDYAQTGLIAAVFIFKMMEWWY 301
I N R+R+ +++ G+ L+S ++LDY++ L +VFIFK +EWWY
Sbjct: 315 HRVVISNRRRDRIN---FVRDWPGSSFFVRLVSILDSILDYSKYILPLSVFIFKSLEWWY 371
Query: 302 QSAEERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCY 361
+E R+SA K A G+ +P D+ LC LCL++R NP++ SGFVFCY
Sbjct: 372 --SENRISA-PTLPIPTPPTPSKRAPGGLEIPRDKRLCPLCLKERTNPTICG-SGFVFCY 427
Query: 362 SCVFKYVSKYKRCPVTLIPASVDQIRRLFQ 391
C+F YV+++ +CP+T +P + +Q+R++++
Sbjct: 428 PCIFGYVNEHSKCPITFLPTNTEQLRKIYE 457
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 45/183 (24%)
Query: 3 FQVGGEGTRPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKILDYEDEFFAALMLI 62
F G + RP+FFEM Q+ S + AL Y V + R I++Y DE F +L+L+
Sbjct: 6 FDNGHDPNRPSFFEMLNQHQMMPSFKPALKYIFTVLSQRNPKFRYIVNYYDECFYSLLLL 65
Query: 63 LEGHSLRTTDGSFAESLY------------------------------------------ 80
LE H L+ +GSF+E+ Y
Sbjct: 66 LEYHYLKYYEGSFSENFYNLKRIKPRNNNANGDGDTLFSLLKRLVVTPSNAGQGPETYTK 125
Query: 81 GXXXXXXXXXXXXDSARKDSSEEVQ---HSGLEKRQRILSVVFLVVLPYFKSKLHAIYNK 137
+ A SS++ + ++ ++ R S+++LV++PYFK KL Y K
Sbjct: 126 SQILKKSFAMIRRNRAAASSSQQAKDDLNTMIQDSDRKESLIYLVLIPYFKGKLDEYYKK 185
Query: 138 ERE 140
E +
Sbjct: 186 ESD 188
>gi|134085809|ref|NP_001076847.1| peroxisomal biogenesis factor 12 [Bos taurus]
gi|133777794|gb|AAI14719.1| PEX12 protein [Bos taurus]
Length = 359
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 101/382 (26%), Positives = 167/382 (43%), Gaps = 45/382 (11%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRR-SFLHKILDYEDEFFAALMLILEGHSLR 69
+P+ FE+ A L +++R AL + + V A + + DE F L L+L+ H L
Sbjct: 17 QPSIFEVVAQDSLMSAVRPALQHVVKVLAESNPAHFGFFWRWFDEIFTLLDLLLQQHYLS 76
Query: 70 TTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFKS 129
T SF+E+ YG + + + ++GL K+Q + S++FLV+LPY K
Sbjct: 77 KTSASFSENFYGLKRIVM--------GDQHKLQRLANAGLPKQQFMKSIMFLVLLPYLKV 128
Query: 130 KLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQLATKIK 189
KL + + RE +D PS + R LA
Sbjct: 129 KLEKLVSSLRE-----------------------EDEYSIHPPSSRWKRFYRAFLAA--- 162
Query: 190 KFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSSRIS 249
YP+++ + EG QL Y+L +S L+ G+++ R T Q++ + +
Sbjct: 163 ------YPFVNMAWEGWFLVQQLRYILGKAQHHSPLLRLAGVRLGRLTVQDIQALEHKPA 216
Query: 250 KIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWYQSA-EERL 308
+ +L + ++ AL V TGL VF + +EWWY S +E +
Sbjct: 217 EA---SMMQLPAGSIGEKIKSALKKAVGGVALSLSTGLSVGVFFLQFLEWWYSSENQETI 273
Query: 309 SAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYSCVFKYV 368
+ T + LP +++C LC + R N +V+ SG+VFCY CVF YV
Sbjct: 274 KSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKNRVNDTVLATSGYVFCYRCVFHYV 333
Query: 369 SKYKRCPVTLIPASVDQIRRLF 390
++ CP+T P V + +L+
Sbjct: 334 RSHQACPITGYPTEVQHLIKLY 355
>gi|57091801|ref|XP_548259.1| PREDICTED: similar to Peroxisome assembly protein 12 (Peroxin-12)
(Peroxisome assembly factor-3) (PAF-3) isoform 1 [Canis
familiaris]
Length = 359
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 102/383 (26%), Positives = 166/383 (43%), Gaps = 47/383 (12%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKIL-DYEDEFFAALMLILEGHSLR 69
+P+ FE+ A L ++R AL + + V A + + DE F L L+L+ H L
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPAHYGFFWRWFDEIFTLLDLLLQQHYLS 76
Query: 70 TTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFKS 129
T SF+E+ YG E + +GL K+Q S++FLV+ PY K
Sbjct: 77 KTSASFSENFYGLKRIVM--------GDTHKLERLASAGLPKKQFWKSIMFLVLFPYLKV 128
Query: 130 KLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQLATKIK 189
KL + + RE +D PS + R LA
Sbjct: 129 KLEKLISSLRE-----------------------EDEYSIHPPSSRWKQFYRAFLAA--- 162
Query: 190 KFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSSRIS 249
YP+++ + EG F QL Y+L +S L+ G+++ R T Q++ + +
Sbjct: 163 ------YPFVNMAWEGCFFVQQLRYILGKAQHHSPLLRLAGVRLGRLTVQDIQALEHKPA 216
Query: 250 KIRNHER-ERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWYQSA-EER 307
+ ++ R G +++ AL + + TGL VF + +EWWY S +E
Sbjct: 217 EASMMQQPARSVGDKIKSSLKKALGGAALTL----STGLSVGVFFLQFLEWWYSSENQET 272
Query: 308 LSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYSCVFKY 367
+ + T + LP +++C LC + R N +V+ SG+VFCY CVF Y
Sbjct: 273 IKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYRCVFNY 332
Query: 368 VSKYKRCPVTLIPASVDQIRRLF 390
V ++ CP+T P V + +L+
Sbjct: 333 VRSHQTCPITGYPTEVQHLIKLY 355
>gi|16758802|ref|NP_446373.1| peroxisomal biogenesis factor 12 [Rattus norvegicus]
gi|12585292|sp|O88177|PEX12_RAT Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome assembly
factor 3) (PAF-3)
gi|3308971|dbj|BAA31558.1| peroxisome assembly factor-3 (PAF-3) [Rattus norvegicus]
gi|47940691|gb|AAH72481.1| Peroxisomal biogenesis factor 12 [Rattus norvegicus]
gi|149053657|gb|EDM05474.1| peroxisomal biogenesis factor 12 [Rattus norvegicus]
Length = 359
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 107/386 (27%), Positives = 164/386 (42%), Gaps = 53/386 (13%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKIL-DYEDEFFAALMLILEGHSLR 69
+P+ FE+ A L ++R AL + + V A + + DE F L +L+ H L
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPAHYGFFWRWFDEIFTLLDFLLQQHYLS 76
Query: 70 TTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQH---SGLEKRQRILSVVFLVVLPY 126
T SF+E YG SS ++Q +GL K S +FLV+LPY
Sbjct: 77 RTSASFSEHFYGLKRIVA-----------GSSPQLQRPASAGLPKEHLWKSAMFLVLLPY 125
Query: 127 FKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQLAT 186
K KL + + RE +D PS + + RV LA
Sbjct: 126 LKVKLEKLASTLRE-----------------------EDEYSIHPPSSHWKRFYRVFLAA 162
Query: 187 KIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSS 246
YP++ + EG T QL Y+L +S L+ G+++ R T Q++
Sbjct: 163 ---------YPFVTMTWEGWFLTQQLRYILGKAEHHSPLLKLAGVRLGRLTAQDIQAMEH 213
Query: 247 RISKIRN-HERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWYQSA- 304
R+ + E R G K ++ AL V TGL VF + ++WWY S
Sbjct: 214 RLVEASAMQEPVRSIG----KKIKSALKKAVGGVALSLSTGLSVGVFFLQFLDWWYSSEN 269
Query: 305 EERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYSCV 364
+E + + T + LP +++C LC + R N +V+ SG+VFCY CV
Sbjct: 270 QETIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKARVNDTVLATSGYVFCYRCV 329
Query: 365 FKYVSKYKRCPVTLIPASVDQIRRLF 390
F YV ++ CP+T P V + +L+
Sbjct: 330 FNYVRSHQACPITGYPTEVQHLIKLY 355
>gi|90076322|dbj|BAE87841.1| unnamed protein product [Macaca fascicularis]
Length = 497
Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats.
Identities = 104/388 (26%), Positives = 168/388 (43%), Gaps = 57/388 (14%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKIL-DYEDEFFAALMLILEGHSLR 69
+P+ FE+ A L ++R AL + + V A + L + DE F L L+++ H L
Sbjct: 155 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPTHYGFLWRWFDEIFTLLDLLVQQHYLS 214
Query: 70 TTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFKS 129
T SF+E+ YG S+ + +GL K+Q S++ LV+LPY K
Sbjct: 215 RTSASFSENFYGLKKIVM--------GDTHKSQRLASAGLPKKQLWKSIMVLVLLPYLKV 266
Query: 130 KLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQLATKIK 189
KL + + RE +D PS + R LA
Sbjct: 267 KLEKLVSSLRE-----------------------EDEYSIHPPSSRWKRFYRAFLAA--- 300
Query: 190 KFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSSRIS 249
YP+++ + EG QL Y+L +S L+ G+++ R T Q++ + +
Sbjct: 301 ------YPFVNMAWEGWFLVQQLRYILGKAQHHSPLLRLAGVRLGRLTVQDIQALEHKPA 354
Query: 250 KIRNHER------ERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWYQS 303
K ++ E+++ K V G LS S TGL VF + ++WWY S
Sbjct: 355 KASMMQQPARSVSEKIKSA-LKKAVGGVALSLS--------TGLSVGVFFLQFLDWWYSS 405
Query: 304 A-EERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCYS 362
+E + + T + LP +++C LC + R N +V+ SG+VFCY
Sbjct: 406 ENQETIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVFCYR 465
Query: 363 CVFKYVSKYKRCPVTLIPASVDQIRRLF 390
CVF YV ++ CP+T P V + +L+
Sbjct: 466 CVFHYVRSHQACPITGYPTEVQHLIKLY 493
>gi|116058518|emb|CAL53707.1| PEXC_ARATH Putative peroxisome assembly protein 12 (ISS)
[Ostreococcus tauri]
Length = 412
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 115/392 (29%), Positives = 179/392 (45%), Gaps = 44/392 (11%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALR--RSFLHKILDYEDEFFAALMLILEGHSL 68
RPTFFE+ AA++L SL+ AL Y+LG A + H ++ +E FA L L E +
Sbjct: 53 RPTFFELIAAERLVPSLKGALAYTLGTLANAGAPTLAHSAMNRGEEVFALLTLCAELRAF 112
Query: 69 RTTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQHSGLEKRQRILSVVFLVVLPYFK 128
+ DGS AES+YG D R D + ++ QR+ S + L + P+ +
Sbjct: 113 ASGDGSLAESVYGLQRVPRTLTK--DRLRSDGRYRI-----DRVQRLGSALALALGPWAR 165
Query: 129 SKLHAIYNKEREARLRESLWGAEDQGFD---EADFFTGDDSIVSREPSGNEELSVR-VQL 184
+K A + + + S G + F+ EADF +GD+ V+ +G+ E+ R +
Sbjct: 166 AKAAAAHARLAPSAY-ASGAGRRRRTFEADGEADF-SGDERAVA--TAGDSEMVERDAGM 221
Query: 185 ATKIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYS-LGLQALGIQVCRATG--QEL 241
++ ++ YP+ +A E +F YLL + +G + R G Q
Sbjct: 222 SSAAQRAFVAAYPYANALIEAATFVTWTGYLLGQWNVNDPTAAERIGGERARVGGDAQAS 281
Query: 242 MDTSSRISKIRNHERERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWWY 301
+S+R + R+ E R P AV FK+ EWWY
Sbjct: 282 AQSSARGFESRDARGECRRAP----------------------GKEFPAVIGFKLTEWWY 319
Query: 302 QSAEERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVFCY 361
+AEER+S T EG+ LP D C LC + NP+++T SG+VFCY
Sbjct: 320 GAAEERVSGATTLPVPPPPPRPPPHPEGVALPDDPGACPLCRKMLRNPALLTCSGYVFCY 379
Query: 362 SCVFKYVSKYKRCPVTLIPA--SVDQIRRLFQ 391
+C+ +V + CPV+ A VD IRR+++
Sbjct: 380 ACIHAHVVRRGDCPVSRHRAMNGVDDIRRVYE 411
>gi|74151248|dbj|BAE38761.1| unnamed protein product [Mus musculus]
gi|148683751|gb|EDL15698.1| peroxisomal biogenesis factor 12, isoform CRA_a [Mus musculus]
Length = 359
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 107/391 (27%), Positives = 165/391 (42%), Gaps = 63/391 (16%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKIL-DYEDEFFAALMLILEGHSLR 69
+P+ FE+ A L ++R AL + + V A + L + DE F L +L+ H L
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPAHYGFLWRWFDEIFTLLDFLLQQHYLS 76
Query: 70 TTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQH---SGLEKRQRILSVVFLVVLPY 126
T SF+E YG SS +Q +GL K S +FLV+LPY
Sbjct: 77 RTSASFSEHFYGLKRIVA-----------GSSPHLQRPASAGLPKEHLWKSAMFLVLLPY 125
Query: 127 FKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQLAT 186
K KL + + RE +D PS + R LA
Sbjct: 126 LKVKLEKLASSLRE-----------------------EDEYSIHPPSSRWKRFYRAFLAA 162
Query: 187 KIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSS 246
YP+++ + EG T QL Y+L +S L+ G+++ R T Q++
Sbjct: 163 ---------YPFVNMAWEGWFLTQQLRYILGKAEHHSPLLKLAGVRLARLTAQDMQAIKQ 213
Query: 247 RISKIRNHER------ERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWW 300
R+ + + E+++ K V G LS S TGL VF + ++WW
Sbjct: 214 RLVEASAMQEPVRSVGEKIKSA-LKKAVGGVALSLS--------TGLSVGVFFLQFLDWW 264
Query: 301 YQSA-EERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVF 359
Y S +E + + T + LP +++C LC + R N +V+ SG+VF
Sbjct: 265 YSSENQEAIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVF 324
Query: 360 CYSCVFKYVSKYKRCPVTLIPASVDQIRRLF 390
CY CVF YV ++ CP+T P V + +L+
Sbjct: 325 CYRCVFNYVRSHQACPITGYPTEVQHLIKLY 355
>gi|19527244|ref|NP_598786.1| peroxisomal biogenesis factor 12 [Mus musculus]
gi|28380105|sp|Q8VC48|PEX12_MOUSE Peroxisome assembly protein 12 (Peroxin-12)
gi|18256304|gb|AAH21800.1| Peroxisomal biogenesis factor 12 [Mus musculus]
gi|26330744|dbj|BAC29102.1| unnamed protein product [Mus musculus]
gi|56205114|emb|CAI25414.1| peroxisomal biogenesis factor 12 [Mus musculus]
gi|74149059|dbj|BAE32186.1| unnamed protein product [Mus musculus]
Length = 359
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 107/391 (27%), Positives = 165/391 (42%), Gaps = 63/391 (16%)
Query: 11 RPTFFEMAAAQQLPASLRAALTYSLGVFALRRSFLHKIL-DYEDEFFAALMLILEGHSLR 69
+P+ FE+ A L ++R AL + + V A + L + DE F L +L+ H L
Sbjct: 17 QPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPAHYGFLWRWFDEIFTLLDFLLQQHYLS 76
Query: 70 TTDGSFAESLYGXXXXXXXXXXXXDSARKDSSEEVQH---SGLEKRQRILSVVFLVVLPY 126
T SF+E YG SS +Q +GL K S +FLV+LPY
Sbjct: 77 RTSASFSEHFYGLKRIVA-----------GSSPHLQRPASAGLPKEHLWKSAMFLVLLPY 125
Query: 127 FKSKLHAIYNKEREARLRESLWGAEDQGFDEADFFTGDDSIVSREPSGNEELSVRVQLAT 186
K KL + + RE +D PS + R LA
Sbjct: 126 LKVKLEKLASSLRE-----------------------EDEYSIHPPSSRWKRFYRAFLAA 162
Query: 187 KIKKFIAVCYPWIHASSEGLSFTYQLLYLLDATGFYSLGLQALGIQVCRATGQELMDTSS 246
YP+++ + EG T QL Y+L +S L+ G+++ R T Q++
Sbjct: 163 ---------YPFVNMAWEGWFLTQQLRYILGKAEHHSPLLKLAGVRLARLTAQDMQAIKQ 213
Query: 247 RISKIRNHER------ERLRGPPWLKTVQGALLSCSYAVLDYAQTGLIAAVFIFKMMEWW 300
R+ + + E+++ K V G LS S TGL VF + ++WW
Sbjct: 214 RLVEASAMQEPVRSVGEKIKSA-LKKAVGGVALSLS--------TGLSVGVFFLQFLDWW 264
Query: 301 YQSA-EERLSAPTVYXXXXXXXXXKMAKEGIPLPPDRSLCALCLQKRANPSVVTVSGFVF 359
Y S +E + + T + LP +++C LC + R N +V+ SG+VF
Sbjct: 265 YSSENQEAIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVNDTVLATSGYVF 324
Query: 360 CYSCVFKYVSKYKRCPVTLIPASVDQIRRLF 390
CY CVF YV ++ CP+T P V + +L+
Sbjct: 325 CYRCVFNYVRSHQACPITGYPTEVQHLIKLY 355