BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= AT3G18160__[Arabidopsis_thaliana]
(358 letters)
Database: nr.pal
6,348,806 sequences; 2,166,943,470 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18401790|ref|NP_566598.1| peroxin-3 family protein [Arab... 618 e-175
gi|21554142|gb|AAM63222.1| unknown [Arabidopsis thaliana] 617 e-175
gi|42572473|ref|NP_974332.1| peroxin-3 family protein [Arab... 503 e-141
gi|22330115|ref|NP_683410.1| peroxin-3 family protein [Arab... 501 e-140
gi|12597815|gb|AAG60126.1|AC073555_10 lysine and histidine ... 466 e-129
gi|12321594|gb|AAG50845.1|AC074308_1 hypothetical protein, ... 429 e-118
gi|157343652|emb|CAO68158.1| unnamed protein product [Vitis... 385 e-105
gi|9294071|dbj|BAB02028.1| unnamed protein product [Arabido... 313 1e-83
gi|115478488|ref|NP_001062839.1| Os09g0314300 [Oryza sativa... 292 3e-77
gi|125563181|gb|EAZ08561.1| hypothetical protein OsI_029793... 278 3e-73
gi|168033870|ref|XP_001769437.1| predicted protein [Physcom... 177 1e-42
gi|168001339|ref|XP_001753372.1| predicted protein [Physcom... 173 2e-41
gi|168004808|ref|XP_001755103.1| predicted protein [Physcom... 167 1e-39
gi|157343645|emb|CAO68151.1| unnamed protein product [Vitis... 125 7e-27
gi|115950368|ref|XP_001176855.1| PREDICTED: similar to pero... 103 2e-20
gi|115704775|ref|XP_780894.2| PREDICTED: similar to peroxis... 103 2e-20
gi|50742652|ref|XP_419708.1| PREDICTED: similar to peroxiso... 96 5e-18
gi|12230450|sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis fac... 93 2e-17
gi|55627480|ref|XP_518776.1| PREDICTED: peroxisomal biogene... 93 3e-17
gi|149642693|ref|NP_001092457.1| peroxisomal biogenesis fac... 93 3e-17
gi|109072523|ref|XP_001091411.1| PREDICTED: peroxisomal bio... 93 4e-17
gi|60834063|gb|AAX37078.1| peroxisomal biogenesis factor 3 ... 92 5e-17
gi|4505727|ref|NP_003621.1| peroxisomal biogenesis factor 3... 92 5e-17
gi|41055494|ref|NP_956522.1| peroxisomal biogenesis factor ... 92 6e-17
gi|125846558|ref|XP_001331521.1| PREDICTED: hypothetical pr... 92 7e-17
gi|73946081|ref|XP_541132.2| PREDICTED: similar to Peroxiso... 92 8e-17
gi|126310649|ref|XP_001370565.1| PREDICTED: similar to pero... 90 3e-16
gi|13786194|ref|NP_112640.1| peroxisomal biogenesis factor ... 89 4e-16
gi|26344674|dbj|BAC35986.1| unnamed protein product [Mus mu... 89 5e-16
gi|9910484|ref|NP_064345.1| peroxisomal biogenesis factor 3... 89 5e-16
gi|148671553|gb|EDL03500.1| peroxisomal biogenesis factor 3... 89 5e-16
gi|113931170|ref|NP_001039031.1| peroxisomal biogenesis fac... 87 2e-15
gi|148236992|ref|NP_001085641.1| MGC82731 protein [Xenopus ... 86 5e-15
gi|156390523|ref|XP_001635320.1| predicted protein [Nematos... 85 7e-15
gi|149409043|ref|XP_001507262.1| PREDICTED: similar to pero... 85 9e-15
gi|149744217|ref|XP_001497293.1| PREDICTED: similar to pero... 83 3e-14
gi|170054875|ref|XP_001863328.1| peroxisomal biogenesis fac... 79 3e-13
gi|148671552|gb|EDL03499.1| peroxisomal biogenesis factor 3... 79 5e-13
gi|157130508|ref|XP_001661904.1| perixosomal biogenesis fac... 78 1e-12
gi|114609586|ref|XP_001172297.1| PREDICTED: similar to Pex3... 76 4e-12
gi|90084964|dbj|BAE91223.1| unnamed protein product [Macaca... 76 4e-12
gi|114052659|ref|NP_001040264.1| peroxisomal biogenesis fac... 74 2e-11
gi|118782681|ref|XP_312432.3| AGAP002507-PA [Anopheles gamb... 71 1e-10
gi|66552210|ref|XP_625168.1| PREDICTED: similar to CG6859-P... 70 3e-10
gi|165970357|gb|AAI58162.1| Unknown (protein for MGC:135489... 69 7e-10
gi|156545722|ref|XP_001604955.1| PREDICTED: similar to peri... 67 2e-09
gi|31652310|emb|CAD92492.1| peroxisomal biogenesis factor 3... 67 3e-09
gi|125978273|ref|XP_001353169.1| GA19910-PA [Drosophila pse... 63 3e-08
gi|91079218|ref|XP_970039.1| PREDICTED: similar to CG6859-P... 61 1e-07
gi|21357431|ref|NP_648753.1| CG6859 CG6859-PA [Drosophila m... 61 1e-07
gi|50547267|ref|XP_501103.1| hypothetical protein [Yarrowia... 55 5e-06
gi|2498757|sp|Q92262|PEX3_PICPA Peroxisomal biogenesis fact... 52 5e-05
gi|66813422|ref|XP_640890.1| transmembrane protein [Dictyos... 52 5e-05
gi|71024235|ref|XP_762347.1| hypothetical protein UM06200.1... 52 6e-05
gi|67523651|ref|XP_659885.1| hypothetical protein AN2281.2 ... 52 6e-05
gi|164658764|ref|XP_001730507.1| hypothetical protein MGL_2... 52 9e-05
gi|169765165|ref|XP_001817054.1| [Aspergillus oryzae] >gi|8... 52 9e-05
gi|121712706|ref|XP_001273964.1| peroxisomal membrane prote... 51 1e-04
gi|111609717|gb|ABH11414.1| peroxin 3 [Penicillium chrysoge... 50 2e-04
gi|119498501|ref|XP_001266008.1| peroxisomal membrane prote... 50 3e-04
gi|115438272|ref|XP_001218024.1| conserved hypothetical pro... 50 4e-04
gi|159126261|gb|EDP51377.1| peroxisomal membrane protein (P... 50 4e-04
gi|70998562|ref|XP_754003.1| peroxisomal membrane protein (... 49 4e-04
gi|156065165|ref|XP_001598504.1| hypothetical protein SS1G_... 49 4e-04
gi|154311445|ref|XP_001555052.1| hypothetical protein BC1G_... 49 7e-04
gi|47207019|emb|CAF91476.1| unnamed protein product [Tetrao... 49 8e-04
gi|6320536|ref|NP_010616.1| Peroxisomal membrane protein (P... 48 9e-04
gi|46125129|ref|XP_387118.1| hypothetical protein FG06942.1... 48 0.001
gi|85109582|ref|XP_962987.1| hypothetical protein NCU06175 ... 47 0.001
gi|2498756|sp|Q01497|PEX3_PICAN Peroxisomal biogenesis fact... 46 0.005
gi|63054664|ref|NP_594868.2| peroxin-3 (predicted) [Schizos... 45 0.006
gi|145253721|ref|XP_001398373.1| hypothetical protein An17g... 45 0.011
gi|50556692|ref|XP_505754.1| YlPEX3 [Yarrowia lipolytica] >... 45 0.011
gi|163644437|gb|AAB52665.2| Peroxisome assembly factor prot... 44 0.015
gi|68484370|ref|XP_713871.1| hypothetical protein CaO19.442... 44 0.018
gi|68483962|ref|XP_714071.1| peroxisomal integral membrane ... 44 0.018
gi|149247879|ref|XP_001528327.1| conserved hypothetical pro... 44 0.020
gi|150866213|ref|XP_001385728.2| Peroxisomal biogenesis fac... 43 0.036
gi|157770057|ref|XP_001676849.1| Hypothetical protein CBG14... 43 0.039
gi|145608718|ref|XP_369909.2| hypothetical protein MGG_0642... 42 0.083
gi|119181807|ref|XP_001242086.1| hypothetical protein CIMG_... 41 0.11
gi|169624208|ref|XP_001805510.1| hypothetical protein SNOG_... 40 0.22
gi|50293983|ref|XP_449403.1| hypothetical protein CAGL0M013... 40 0.22
gi|7491027|pir||T38475 hypothetical protein SPAC29A4.14c - ... 40 0.23
gi|116334661|ref|YP_796188.1| tRNA (uracil-5-)-methyltransf... 37 2.8
gi|146418842|ref|XP_001485386.1| hypothetical protein PGUG_... 37 2.9
gi|62262210|gb|AAX78052.1| unknown protein [synthetic const... 36 3.3
gi|56707612|ref|YP_169508.1| diadenosine tetraphosphatase [... 36 3.4
gi|118497160|ref|YP_898210.1| diadenosine tetraphosphatase ... 36 3.5
gi|116207984|ref|XP_001229801.1| hypothetical protein CHGG_... 36 3.9
gi|58265190|ref|XP_569751.1| Pex3p [Cryptococcus neoformans... 36 4.7
gi|134109127|ref|XP_776678.1| hypothetical protein CNBC1690... 36 4.7
gi|89256871|ref|YP_514233.1| Bis(5'-nucleosyl)-tetraphospha... 35 6.8
gi|50425749|ref|XP_461471.1| hypothetical protein DEHA0F275... 35 7.4
gi|156847249|ref|XP_001646509.1| hypothetical protein Kpol_... 35 8.5
>gi|18401790|ref|NP_566598.1| peroxin-3 family protein [Arabidopsis thaliana]
Length = 358
Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats.
Identities = 331/358 (92%), Positives = 331/358 (92%)
Query: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM
Sbjct: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
Query: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK
Sbjct: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSH QKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 180
Query: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH
Sbjct: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
Query: 241 WVDYLMMSQXXXXXXXXXXXXXXKFHLLITETREVLTSNDFSNVAEISLKCCAVALVEEM 300
WVDYLMMSQ KFHLLITETREVLTSNDFSNVAEISLKCCAVALVEEM
Sbjct: 241 WVDYLMMSQDATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCCAVALVEEM 300
Query: 301 ETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMPQ 358
ETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMPQ
Sbjct: 301 ETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMPQ 358
>gi|21554142|gb|AAM63222.1| unknown [Arabidopsis thaliana]
Length = 358
Score = 617 bits (1590), Expect = e-175, Method: Composition-based stats.
Identities = 330/358 (92%), Positives = 330/358 (92%)
Query: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM
Sbjct: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
Query: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK
Sbjct: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSH QKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 180
Query: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH
Sbjct: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
Query: 241 WVDYLMMSQXXXXXXXXXXXXXXKFHLLITETREVLTSNDFSNVAEISLKCCAVALVEEM 300
WVDYLMMSQ KFHLLITETREVL SNDFSNVAEISLKCCAVALVEEM
Sbjct: 241 WVDYLMMSQDATTDVSSSDATVTKFHLLITETREVLASNDFSNVAEISLKCCAVALVEEM 300
Query: 301 ETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMPQ 358
ETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMPQ
Sbjct: 301 ETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMPQ 358
>gi|42572473|ref|NP_974332.1| peroxin-3 family protein [Arabidopsis thaliana]
Length = 304
Score = 503 bits (1295), Expect = e-141, Method: Composition-based stats.
Identities = 272/304 (89%), Positives = 275/304 (90%)
Query: 55 IIKTQMKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQ 114
++ +MKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQ
Sbjct: 1 MLYVRMKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQ 60
Query: 115 LWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXX 174
LWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSH
Sbjct: 61 LWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIER 120
Query: 175 XXXQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMS 234
QKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMS
Sbjct: 121 DDEQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMS 180
Query: 235 TGSPHHWVDYLMMSQXXXXXXXXXXXXXXKFHLLITETREVLTSNDFSNVAEISLKCCAV 294
TGSPHHWVDYLMMSQ KFHLLITETREVLTSNDFSNVAEISLKCCAV
Sbjct: 181 TGSPHHWVDYLMMSQDATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCCAV 240
Query: 295 ALVEEMETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 354
ALVEEMETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA
Sbjct: 241 ALVEEMETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 300
Query: 355 NMPQ 358
NMPQ
Sbjct: 301 NMPQ 304
>gi|22330115|ref|NP_683410.1| peroxin-3 family protein [Arabidopsis thaliana]
gi|18650624|gb|AAL75911.1| At1g48640/F11I4_17 [Arabidopsis thaliana]
gi|21700807|gb|AAM70527.1| At1g48640/F11I4_17 [Arabidopsis thaliana]
gi|51968824|dbj|BAD43104.1| unknown protein [Arabidopsis thaliana]
Length = 364
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 265/364 (72%), Positives = 297/364 (81%), Gaps = 6/364 (1%)
Query: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
MD VRG WRKHRRK+LVT CLGSGYLLYKLYN+HTR+LADLERELA+ERENDEIIKTQM
Sbjct: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
Query: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
KAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQLW+ELK
Sbjct: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSH QKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
Query: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
L+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMSTGSPHH
Sbjct: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
Query: 241 WVDYLMMSQXXXXXXXXXXXX---XXKFHLLITETREVLTSNDFSNVAEISLKCCAVALV 297
WVDYLMM Q KFH L+ ETREVL S +F+N+ EISLKC LV
Sbjct: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
Query: 298 EEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 354
EEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLFFTLLYA
Sbjct: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
Query: 355 NMPQ 358
NMPQ
Sbjct: 361 NMPQ 364
>gi|12597815|gb|AAG60126.1|AC073555_10 lysine and histidine specific transporter, putative [Arabidopsis
thaliana]
Length = 809
Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats.
Identities = 243/372 (65%), Positives = 277/372 (74%), Gaps = 36/372 (9%)
Query: 10 KHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQ---------- 59
+HRRK+LVT CLGSGYLLYKLYN+HTR+LADLERELA+ERENDEIIKTQ
Sbjct: 7 EHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQLSSVLIKTDP 66
Query: 60 --------------------MKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDK 99
MKAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+
Sbjct: 67 LDFSSYGFSNGPVLFVLLFRMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR 126
Query: 100 LSKGKGILIPSEKLQLWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARG 159
L++GKG+L P EKLQLW+ELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR
Sbjct: 127 LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA 186
Query: 160 LGSSHXXXXXXXXXXXXXQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTS 219
LGSSH QKFL+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT
Sbjct: 187 LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR 246
Query: 220 ALRETVMRILDVFMSTGSPHHWVDYLMMSQXXXXXXXXXXXX---XXKFHLLITETREVL 276
L+ETVM+I+DVFMSTGSPHHWVDYLMM Q KFH L+ ETREVL
Sbjct: 247 VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL 306
Query: 277 TSNDFSNVAEISLKCCAVALVEEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKN 333
S +F+N+ EISLKC LVEEMETQT GLATG LAK+LPQIEKTM I+AEP KN
Sbjct: 307 ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 366
Query: 334 RFLQLIRDLPEV 345
RFLQ+IRDLPE+
Sbjct: 367 RFLQIIRDLPEI 378
>gi|12321594|gb|AAG50845.1|AC074308_1 hypothetical protein, 3' partial [Arabidopsis thaliana]
Length = 443
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 236/375 (62%), Positives = 272/375 (72%), Gaps = 41/375 (10%)
Query: 10 KHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQ---------- 59
+HRRK+LVT CLGSGYLLYKLYN+HTR+LADLERELA+ERENDEIIKTQ
Sbjct: 7 EHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQLSSVLIKTDP 66
Query: 60 --------------------MKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDK 99
MKAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+
Sbjct: 67 LDFSSYGFSNGPVLFVLLFRMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR 126
Query: 100 LSKGKGILIPSEKLQLWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARG 159
L++GKG+L P EKLQLW+ELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR
Sbjct: 127 LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA 186
Query: 160 LGSSHXXXXXXXXXXXXXQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTS 219
LGSSH QKFL+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT
Sbjct: 187 LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR 246
Query: 220 ALRETVMRILDVFMSTGSPHHWVDYLMMSQXXXXXXXXXXXX---XXKFHLLITETREVL 276
L+ETVM+I+DVFMSTGSPHHWVDYLMM Q KFH L+ ETREVL
Sbjct: 247 VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL 306
Query: 277 TSNDFSNVAEISLKCCAVALVEEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKN 333
S +F+N+ EISLKC LVEEMETQT GLATG LAK+LPQIEKTM I+AEP KN
Sbjct: 307 ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 366
Query: 334 R-----FLQLIRDLP 343
R ++Q+ +P
Sbjct: 367 RLSDKMYIQMTDGVP 381
>gi|157343652|emb|CAO68158.1| unnamed protein product [Vitis vinifera]
Length = 375
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 207/365 (56%), Positives = 258/365 (70%), Gaps = 14/365 (3%)
Query: 7 LWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAHFDN 66
WR+HRRKI V+ GSGYLLYKLY+AH R+L DLERELA +REN+E+IK QM+AHF++
Sbjct: 9 FWRRHRRKIFVSVGVFGSGYLLYKLYDAHRRRLDDLERELAVQRENEELIKAQMQAHFES 68
Query: 67 IQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSEKLQLWNELKILS 123
IQ IADTTTLPH++ +LS R+ EE+D+S + ++L KGKG L PSEKL+LW+ LKILS
Sbjct: 69 IQRIADTTTLPHSMLYLSGRIAEELDLSHLTERLMKGKGQPNTLTPSEKLELWDRLKILS 128
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQKFLTS 183
FTRMVLSLW++TMLSLYIRVQVNILGRHLYIDTARG GSSH QKFL S
Sbjct: 129 FTRMVLSLWAMTMLSLYIRVQVNILGRHLYIDTARGGGSSHLLEEADPIDRHDQQKFLAS 188
Query: 184 ADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHHWVD 243
ADFL+ +P+LISNM A EVLKGKQL+DV + L T+M+ILD+F+STG PH+ VD
Sbjct: 189 ADFLSNYSIPALISNMHAAAAEVLKGKQLRDVFNSMVLHGTIMQILDLFISTGKPHNLVD 248
Query: 244 YLMMSQXXXXX-------XXXXXXXXXKFHLLITETREVLTSNDFSNVAEISLKCCAVAL 296
YLM KF L+ ETR VL+S +F NV ++SL+ A+
Sbjct: 249 YLMPDDTKSYKPASPSNGDSSTPADVTKFDQLMVETRAVLSSAEFINVIDVSLRTVVDAV 308
Query: 297 VEEME-TQTG---LATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLL 352
VE+M Q G ++GM LAKLLP++ + P + EP KNRF+Q+I+ PEV+ FFTLL
Sbjct: 309 VEDMMGVQLGGGSPSSGMVLAKLLPRVAQMGPLLLEEPSKNRFIQIIQKAPEVEFFFTLL 368
Query: 353 YANMP 357
YANMP
Sbjct: 369 YANMP 373
>gi|9294071|dbj|BAB02028.1| unnamed protein product [Arabidopsis thaliana]
Length = 197
Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats.
Identities = 167/181 (92%), Positives = 167/181 (92%)
Query: 178 QKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGS 237
QKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGS
Sbjct: 17 QKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGS 76
Query: 238 PHHWVDYLMMSQXXXXXXXXXXXXXXKFHLLITETREVLTSNDFSNVAEISLKCCAVALV 297
PHHWVDYLMMSQ KFHLLITETREVLTSNDFSNVAEISLKCCAVALV
Sbjct: 77 PHHWVDYLMMSQDATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCCAVALV 136
Query: 298 EEMETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMP 357
EEMETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMP
Sbjct: 137 EEMETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMP 196
Query: 358 Q 358
Q
Sbjct: 197 Q 197
>gi|115478488|ref|NP_001062839.1| Os09g0314300 [Oryza sativa (japonica cultivar-group)]
gi|50726384|dbj|BAD33995.1| peroxisomal biogenesis factor 3-like [Oryza sativa Japonica Group]
gi|113631072|dbj|BAF24753.1| Os09g0314300 [Oryza sativa (japonica cultivar-group)]
Length = 380
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 159/372 (42%), Positives = 228/372 (61%), Gaps = 19/372 (5%)
Query: 5 RGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAHF 64
RG W +HRRKILV+ G+GY Y+ ++H R+L +E+ ER +EIIK Q++ HF
Sbjct: 6 RGFWGRHRRKILVSLGVAGAGYAAYRYLDSHRRQLVRVEQRALEERAAEEIIKNQLQTHF 65
Query: 65 DNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG-----ILIPSEKLQLWNEL 119
+N+Q I+DTTTLP A+H+L SR++EE+D+S + +KL GKG L P EK W ++
Sbjct: 66 ENVQKISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDTWEKI 125
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQK 179
KILSFTR V S+W++T+LSLY+RVQV ILGRHLY+D AR + +
Sbjct: 126 KILSFTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQLQEGSDTFSKSGHKD 185
Query: 180 FLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPH 239
FL +AD+LAT G+ +LI+ MQ+A E+LK KQLKD + + ET+++IL FM +
Sbjct: 186 FLATADYLATYGINALITKMQHAATEILKEKQLKDPMGIDEVLETILQILKQFMGLCEDN 245
Query: 240 HWVDY-----------LMMSQXXXXXXXXXXXXXXKFHLLITETREVLTSNDFSNVAEIS 288
W++Y LM K L++ETR VL+S+DF N+ + S
Sbjct: 246 SWINYLVPENANVYAQLMAVSSSGFDDSSLLKDVRKLDQLMSETRIVLSSDDFRNIMDRS 305
Query: 289 LKCCAVALVEEMETQTGLAT---GMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEV 345
LK A +VE++ Q G G+ LAKLL ++ + + EP+KN+ +Q+IR +PEV
Sbjct: 306 LKKIASVVVEDLAVQIGAPIPPPGLPLAKLLAKVAQLSLPLLEEPDKNKHIQIIRSMPEV 365
Query: 346 KLFFTLLYANMP 357
+LF+T LYANMP
Sbjct: 366 ELFYTFLYANMP 377
>gi|125563181|gb|EAZ08561.1| hypothetical protein OsI_029793 [Oryza sativa (indica
cultivar-group)]
gi|125605172|gb|EAZ44208.1| hypothetical protein OsJ_027691 [Oryza sativa (japonica
cultivar-group)]
Length = 376
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 156/372 (41%), Positives = 224/372 (60%), Gaps = 23/372 (6%)
Query: 5 RGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAHF 64
RG W +HRRKILV+ G+GY Y+ ++H R+L +E+ ER +EIIK Q++ HF
Sbjct: 6 RGFWGRHRRKILVSLGVAGAGYAAYRYLDSHRRQLVRVEQRALEERAAEEIIKNQLQTHF 65
Query: 65 DNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG-----ILIPSEKLQLWNEL 119
+N+Q I+DTTTLP A+H+L SR++EE+D+S + +KL GKG L P EK W ++
Sbjct: 66 ENVQKISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDTWEKI 125
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQK 179
KILSFTR V S+W++T+LSLY+RVQV ILGRHLY+D AR + +
Sbjct: 126 KILSFTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQLQEGSDTFSKSGHKD 185
Query: 180 FLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPH 239
FL +AD+LAT G+ +LI+ MQ+A E+LK KQLKD + + ET+++IL FM +
Sbjct: 186 FLATADYLATYGINALITKMQHAATEILKEKQLKDPMGIDEVLETILQILKQFMGLCEDN 245
Query: 240 HWVDY-----------LMMSQXXXXXXXXXXXXXXKFHLLITETREVLTSNDFSNVAEIS 288
W++Y LM K L++ETR VL+ N+ + S
Sbjct: 246 SWINYLVPENANVYAQLMAVSSSGFDDSSLLKDVRKLDQLMSETRIVLS----RNIMDRS 301
Query: 289 LKCCAVALVEEMETQTGLAT---GMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEV 345
LK A +VE++ Q G G+ LAKLL ++ + + EP+KN+ +Q+IR +PEV
Sbjct: 302 LKKIASVVVEDLAVQIGAPIPPPGLPLAKLLAKVAQLSLPLLEEPDKNKHIQIIRSMPEV 361
Query: 346 KLFFTLLYANMP 357
+LF+T LYANMP
Sbjct: 362 ELFYTFLYANMP 373
>gi|168033870|ref|XP_001769437.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679357|gb|EDQ65806.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 119/374 (31%), Positives = 188/374 (50%), Gaps = 33/374 (8%)
Query: 9 RKHRRKILVTTTCLGSGYLLYKLYNAH-------TRKLADLERELANERENDEIIKTQMK 61
+KH+R +LV +G G +Y Y H RK D R RE +E + Q++
Sbjct: 18 KKHQRSLLVAAGLVGGGSAVY--YGLHYLGLTSQARKERDAARAALLHREAEERAEAQLQ 75
Query: 62 AHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSEKLQLWNE 118
+HF++IQ I+DTTTLP + L + + ++D+S + +KL GK L +K+QLW E
Sbjct: 76 SHFESIQRISDTTTLPSVLPQLKASLFSKVDLSGLTEKLILGKDDPQALSQRDKMQLWQE 135
Query: 119 LKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQ 178
LK LSFTR V ++ ++++L L+IR+Q+NILGR +Y DTAR +
Sbjct: 136 LKTLSFTRTVCAMSALSLLDLFIRIQLNILGRRVYFDTARDFMNPE--DLHAPLSMSVQH 193
Query: 179 KFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSP 238
KF+ A +L G+ +L+ ++ A + L+GKQLK+ T L+ +RIL S
Sbjct: 194 KFIAFAGYLHHKGLAALVGDIYKAAEIELRGKQLKESFTLYDLKNVFVRILATLDSKRPA 253
Query: 239 HHWVDYLM---------------MSQXXXXXXXXXXXXXXKFHLLITETREVLTSNDFSN 283
WV Y++ + L+ ETR VL SN+F
Sbjct: 254 --WVQYVLPPDNVLPEDLAGASSAADASNQFADVATSDNEVLDQLMNETRAVLASNEFHE 311
Query: 284 VAEISLKCCAVALVEEMET--QTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRD 341
V + L+ ++EE+ T + +G+ LAKLLP + + P++NRF++++
Sbjct: 312 VQAVCLEVMLDGVMEELYTIYRGSSDSGIPLAKLLPPVAGAGSTLLEHPDENRFIRILAS 371
Query: 342 LPEVKLFFTLLYAN 355
LP+V F L+Y N
Sbjct: 372 LPQVHAFCALVYTN 385
>gi|168001339|ref|XP_001753372.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695251|gb|EDQ81595.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 399
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 112/371 (30%), Positives = 191/371 (51%), Gaps = 28/371 (7%)
Query: 9 RKHRRKILVTTTCLGSGYLLYKL-----YNAHTRKLADLERELANERENDEIIKTQMKAH 63
+K+RR +L+ +G G +Y ++ +RK D R ++E +E + Q+++H
Sbjct: 18 KKYRRSLLIAAGLVGGGTAIYYGVQYLGLDSQSRKERDAARVALVQKEAEERAEVQLQSH 77
Query: 64 FDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGK---GILIPSEKLQLWNELK 120
F+ IQ I+D+TTLP + HL + + ++D+ + DKL K +L +K+QLW ELK
Sbjct: 78 FEGIQRISDSTTLPSVLPHLKASLYSKVDLEGLTDKLMLCKVDPQLLSHRDKMQLWQELK 137
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQKF 180
SF R V ++ +V++L L+IR+Q+NILGR +Y DTAR + +S KF
Sbjct: 138 TRSFARTVCAMTAVSLLDLFIRIQLNILGRRVYFDTARNMMNSE--DSHVPLSMSVQHKF 195
Query: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
+ A +L G+ +L+++ V+ VL+GKQLK+ T LR+ M+I S SP
Sbjct: 196 IAFAGYLHHKGLATLVADTYKVVEIVLRGKQLKEPYTIDELRDVFMKIRASLDSRRSP-- 253
Query: 241 WVDYLMMSQXXX--------------XXXXXXXXXXXKFHLLITETREVLTSNDFSNVAE 286
WV Y++ + L+ ETR V++S++F+ V
Sbjct: 254 WVQYVLPPENVLPDEFVATSSAADAAASVSDMTHEDDVLAQLMNETRAVVSSDEFNEVLA 313
Query: 287 ISLKCCAVALVEEMET--QTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPE 344
+ L ++EE+ T + + LA++LP + + P++NRF+ ++ +LP+
Sbjct: 314 VCLDAILDGVMEELYTIYRGSPDNSIPLARMLPPVAGAGSTLLEHPDENRFISILANLPQ 373
Query: 345 VKLFFTLLYAN 355
V F L+Y N
Sbjct: 374 VHAFCALVYTN 384
>gi|168004808|ref|XP_001755103.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693696|gb|EDQ80047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 110/341 (32%), Positives = 172/341 (50%), Gaps = 23/341 (6%)
Query: 34 AHTRKLADLERELANERENDEIIKTQMKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDV 93
+ RK D+ R +RE +E + Q+++HF++IQ I+DTTTLP + L R+ ++D+
Sbjct: 48 SQARKERDVARAALLQREAEERAEAQLQSHFESIQRISDTTTLPSMLPQLKDRLFSKVDL 107
Query: 94 SSIMDKLSKGK---GILIPSEKLQLWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGR 150
S + +KL GK L EK+QLW ELK LSF R V ++ ++++L L+IR+Q+NILGR
Sbjct: 108 SGLTEKLILGKEDPQSLSQREKMQLWQELKTLSFVRTVCAMSALSLLDLFIRIQLNILGR 167
Query: 151 HLYIDTARGLGSSHXXXXXXXXXXXXXQKFLTSADFLATSGMPSLISNMQNAVKEVLKGK 210
H+Y DTAR + KF+ A +L G+ +L+ ++ A + VL+ K
Sbjct: 168 HVYFDTARDFMNPE--DSHVPLSMSVQHKFIAYAGYLHHKGLDALVGDVNQAAEIVLRSK 225
Query: 211 QLKDVLTTSALRETVMRILDVFMSTGSPHHWVDYLM--------------MSQXXXXXXX 256
LK+ T LR+ MRI S S WV Y++ +
Sbjct: 226 PLKEPYTLDDLRDVFMRIRATLDSKRSA--WVQYVLPPDNVLPDDLSVASSADASNPVAE 283
Query: 257 XXXXXXXKFHLLITETREVLTSNDFSNVAEISLKCCAVALVEEMET--QTGLATGMQLAK 314
L+ ETR VL SN+F V + + ++EE+ + G+ LAK
Sbjct: 284 MALNDNEVLDQLMNETRAVLVSNEFHEVMAVCVDSMLDGVMEELYAIYRGSSDNGIPLAK 343
Query: 315 LLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYAN 355
LLP + + + NRF++++ DLP+V F L+Y N
Sbjct: 344 LLPPVAGAGSALLESLDDNRFIRILADLPQVHAFCALVYTN 384
>gi|157343645|emb|CAO68151.1| unnamed protein product [Vitis vinifera]
Length = 170
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 72/159 (45%), Positives = 97/159 (61%), Gaps = 11/159 (6%)
Query: 210 KQLKDVLTTSALRETVMRILDVFMSTGSPHHWVDYLMMSQXXXXX-------XXXXXXXX 262
KQL+DV + L T+M+ILD+F+STG PH+ VDYLM
Sbjct: 10 KQLRDVFNSMVLHGTIMQILDLFISTGKPHNLVDYLMPDDTKSYKPASPSNGDSSTPADV 69
Query: 263 XKFHLLITETREVLTSNDFSNVAEISLKCCAVALVEEME-TQTG---LATGMQLAKLLPQ 318
KF L+ ETR VL+S +F NV ++SL+ A+VE+M Q G ++GM LAKLLP+
Sbjct: 70 TKFDQLMVETRAVLSSAEFINVIDVSLRTVVDAVVEDMMGVQLGGGSPSSGMVLAKLLPR 129
Query: 319 IEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMP 357
+ + P + EP KNRF+Q+I+ PEV+ FFTLLYANMP
Sbjct: 130 VAQMGPLLLEEPSKNRFIQIIQKAPEVEFFFTLLYANMP 168
>gi|115950368|ref|XP_001176855.1| PREDICTED: similar to peroxisomal biogenesis factor 3
[Strongylocentrotus purpuratus]
Length = 388
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 97/375 (25%), Positives = 169/375 (45%), Gaps = 44/375 (11%)
Query: 9 RKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAH-FDNI 67
++HRRK LV G LLYK A+ + + E E E + +AH F++
Sbjct: 10 KRHRRKFLVLGAVAGGASLLYKY--------AEWKLKEWRETEEAECLAMARRAHHFESN 61
Query: 68 QMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELKILSFTRM 127
Q + T L I L ++ ++ ++ KL G K+ +WNELK++SFTRM
Sbjct: 62 QRTCNMTVLS-MIPKLRELLLYHLNSEELIQKLKSGT-----ENKVVVWNELKVVSFTRM 115
Query: 128 VLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQKFLTSADFL 187
V+S++S +L+ ++RVQ+NILG ++Y+DT G + +++L +L
Sbjct: 116 VVSVYSTVLLTAFLRVQLNILGGYMYLDTLA--GKNGLTYYQVHATQDVQKEYLAMVQYL 173
Query: 188 ATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRIL----------DVFMSTGS 237
T G+ LI+++Q V+ V+ L+ +L+ S + E + ++ +V + S
Sbjct: 174 LTDGLTELINHVQEVVQNVVGSISLQQLLSLSDMEEIIAKVRGQVETTQYGGEVVVPDCS 233
Query: 238 PHHWVDYLMMSQXXXXXXXXXXXXXXKFHL--LITETREVLTSNDFSNVAEISLKCCAVA 295
H YL+ + + L + ETR+++ S+DFS V L
Sbjct: 234 IHPLGRYLLKPEGLDGEESACRLSDDQLVLSQMQIETRDLVESHDFSCVMNSCLDIGFSR 293
Query: 296 LVEEM------------ETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLP 343
L++ M E+ GL M AK +P + + + + N F+Q + +
Sbjct: 294 LLDNMAEFFRPVTTRNGESPCGLKLAM--AKAIPIVNGQVNALCCD-TPNHFIQELLLMQ 350
Query: 344 EVKLFFTLLYANMPQ 358
VK F + +Y Q
Sbjct: 351 CVKDFASNVYEGFSQ 365
>gi|115704775|ref|XP_780894.2| PREDICTED: similar to peroxisomal biogenesis factor 3
[Strongylocentrotus purpuratus]
Length = 388
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 97/375 (25%), Positives = 169/375 (45%), Gaps = 44/375 (11%)
Query: 9 RKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAH-FDNI 67
++HRRK LV G LLYK A+ + + E E E + +AH F++
Sbjct: 10 KRHRRKFLVLGAVAGGASLLYKY--------AEWKLKEWRETEEAECLAMARRAHHFESN 61
Query: 68 QMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELKILSFTRM 127
Q + T L I L ++ ++ ++ KL G K+ +WNELK++SFTRM
Sbjct: 62 QRTCNMTVLS-MIPKLRELLLYHLNSEELIQKLKSGT-----ENKVVVWNELKVVSFTRM 115
Query: 128 VLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQKFLTSADFL 187
V+S++S +L+ ++RVQ+NILG ++Y+DT G + +++L +L
Sbjct: 116 VVSVYSTVLLTAFLRVQLNILGGYMYLDTLA--GKNGLTYYQVHATQDVQKEYLAMVQYL 173
Query: 188 ATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRIL----------DVFMSTGS 237
T G+ LI+++Q V+ V+ L+ +L+ S + E + ++ +V + S
Sbjct: 174 LTDGLTELINHVQEVVQNVVGSISLQQLLSLSDMEEIIAKVRGQVETTQYGGEVVVPDCS 233
Query: 238 PHHWVDYLMMSQXXXXXXXXXXXXXXKFHL--LITETREVLTSNDFSNVAEISLKCCAVA 295
H YL+ + + L + ETR+++ S+DFS V L
Sbjct: 234 IHPLGRYLLKPEGLDGEESACRLSDDQLVLSQMQIETRDLVESHDFSCVMNSCLDIGFSR 293
Query: 296 LVEEM------------ETQTGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLP 343
L++ M E+ GL M AK +P + + + + N F+Q + +
Sbjct: 294 LLDNMAEFFRPVTTRNGESPCGLKLAM--AKAIPIVNGQVNALCCD-TPNHFIQELLLMQ 350
Query: 344 EVKLFFTLLYANMPQ 358
VK F + +Y Q
Sbjct: 351 CVKDFASNVYEGFSQ 365
>gi|50742652|ref|XP_419708.1| PREDICTED: similar to peroxisomal biogenesis factor 3 [Gallus
gallus]
Length = 369
Score = 95.5 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 98/376 (26%), Positives = 172/376 (45%), Gaps = 43/376 (11%)
Query: 3 LVRGLW---RKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQ 59
++R LW ++H++K LV T LG YLL K R++ ERE A + I + +
Sbjct: 1 MLRSLWSFLKRHKKKCLVLGTFLGGVYLLGKYGQKKIREIQ--EREAA-----EYIAQAR 53
Query: 60 MKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNEL 119
+ HF++ Q + T L + L ++ +++ S+ L P+ KL++W +L
Sbjct: 54 RQYHFESNQRTCNMTVLS-MLPTLRDALMHQLNSESLTSLLKNR-----PANKLEIWEDL 107
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQK 179
KI+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + Q+
Sbjct: 108 KIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVCKNG----TTPLAPPEVQQQ 163
Query: 180 FLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGS-- 237
+L+S L G+ LI+ ++ AV +V LK L+ L + + I DV S
Sbjct: 164 YLSSIQHLLGDGLTELITIVKQAVHKVFGSISLKHALSLLELEQKLKEIRDVVEHRDSDQ 223
Query: 238 --PHHWVDYLMMSQXXXXXXXXXXXXXXKFHL---LITETREVLTSNDFSNVAEISLKCC 292
P+ + + +M + L+ ETR++L S DFS V L
Sbjct: 224 VAPYSPLCHYLMPDEENPLATQACGLTERDTATIKLLNETRDMLESPDFSTVLSTCLNRG 283
Query: 293 AVALVEEME----------TQTGLATGMQ-----LAKLLPQIEKTMPEISAEPEKNRFLQ 337
L++ M +Q G + LAK++P I + I +E + F+Q
Sbjct: 284 FSQLLDNMAEFFRPTEQDFSQNGSVNSLSSVSLPLAKIIPIINGQIHSICSE-TPSHFVQ 342
Query: 338 LIRDLPEVKLFFTLLY 353
+ + ++K F +Y
Sbjct: 343 DLLMMEQMKDFAANVY 358
>gi|12230450|sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
gi|8926877|dbj|BAA97994.1| Pex3p [Cricetulus longicaudatus]
Length = 373
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 94/381 (24%), Positives = 174/381 (45%), Gaps = 49/381 (12%)
Query: 3 LVRGLW---RKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQ 59
++R +W ++H++K + T LG Y+L K R++ ERE A + I + +
Sbjct: 1 MLRSMWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQAR 53
Query: 60 MKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNEL 119
+ HF++ Q + T L + L ++++++ S+ L PS KL++W +L
Sbjct: 54 RQYHFESNQRTCNMTVLS-MLPTLREALMQQLNSESLTALLKNR-----PSNKLEIWEDL 107
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQK 179
KI+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + Q+
Sbjct: 108 KIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA----TVGKNGTTVLAPPDVQQQ 163
Query: 180 FLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPH 239
+L+S L G+ L++ ++ AV+ +L LK L+ L + + I + SP
Sbjct: 164 YLSSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHRSP- 222
Query: 240 HWVD----------YLMMSQXXXXXXXXXXXXXXKFHL--LITETREVLTSNDFSNVAEI 287
W+D Y+M + L+ ETR++L S DFS V
Sbjct: 223 SWIDKDVSKSSLCQYMMPDEETPLAAQAYGLSPRDITTIKLLNETRDMLESPDFSTVLNT 282
Query: 288 SLKCCAVALVEEME-----TQTGLATG----------MQLAKLLPQIEKTMPEISAEPEK 332
L L++ M T+ L G + LAK++P + + + ++
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSD-TP 341
Query: 333 NRFLQLIRDLPEVKLFFTLLY 353
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLMMEQVKDFAANVY 362
>gi|55627480|ref|XP_518776.1| PREDICTED: peroxisomal biogenesis factor 3 isoform 2 [Pan
troglodytes]
Length = 373
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 95/381 (24%), Positives = 177/381 (46%), Gaps = 49/381 (12%)
Query: 3 LVRGLW---RKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQ 59
++R +W ++H++K + T LG Y+L K R++ ERE A + I + +
Sbjct: 1 MLRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQAR 53
Query: 60 MKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNEL 119
+ HF++ Q + T L + L ++++++ S+ L PS KL++W +L
Sbjct: 54 RQYHFESNQRTCNMTVLS-MLPTLREALMQQLNSESLTALLKNR-----PSNKLEIWEDL 107
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQK 179
KI+SFTR +++++S ML + +RVQ+NI+G ++Y+D A +G + Q+
Sbjct: 108 KIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKN---GTTILAPPDVQQQ 163
Query: 180 FLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPH 239
+L+S L G+ LI+ ++ AV+++L LK L+ L + + I ++ S
Sbjct: 164 YLSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS- 222
Query: 240 HWVD----------YLMMSQXXXXXXXXXXXXXXKFHL--LITETREVLTSNDFSNVAEI 287
W++ Y+M + L+ ETR++L S DFS V
Sbjct: 223 SWINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTIKLLNETRDMLESPDFSTVLNT 282
Query: 288 SLKCCAVALVEEME-----TQTGLATG----------MQLAKLLPQIEKTMPEISAEPEK 332
L L++ M T+ L G + LAK++P + + + +E
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 341
Query: 333 NRFLQLIRDLPEVKLFFTLLY 353
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLTMEQVKDFAANVY 362
>gi|149642693|ref|NP_001092457.1| peroxisomal biogenesis factor 3 [Bos taurus]
gi|148878101|gb|AAI46193.1| MGC166343 protein [Bos taurus]
Length = 373
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 97/380 (25%), Positives = 174/380 (45%), Gaps = 47/380 (12%)
Query: 3 LVRGLW---RKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQ 59
+ R W ++H++K + T LG Y+L K R++ ERE A + I + +
Sbjct: 1 MFRSTWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQAR 53
Query: 60 MKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNEL 119
+ HF++ Q + T L + L ++++++ S+ L PS KL++W +L
Sbjct: 54 RQYHFESNQRTCNMTVLS-MLPTLREALMQQLNSESLTALLKTR-----PSNKLEIWEDL 107
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQK 179
KI+SFTR +++++S ML + +RVQ+NI+G ++Y+D A +G + Q+
Sbjct: 108 KIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKN---GTTVLAPPDVQQQ 163
Query: 180 FLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDV-------- 231
+L+S L G+ LI+ ++ AV+++L LK L+ L + + I D+
Sbjct: 164 YLSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRDLVEQHKSSS 223
Query: 232 -FMSTGSPHHWVDYLMMSQXXXXXXXXXXXXXXKFHL--LITETREVLTSNDFSNVAEIS 288
+ GS Y+M + L+ ETR++L S DFS V
Sbjct: 224 WINNDGSKSLLCHYMMPDEETPLAVQACGLSPRDVTTIKLLNETRDMLESPDFSTVLNTC 283
Query: 289 LKCCAVALVEEME-----TQTGLATG----------MQLAKLLPQIEKTMPEISAEPEKN 333
L L++ M T+ L G + LAK++P I + + +E +
Sbjct: 284 LSRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIINGQIHSVCSE-TPS 342
Query: 334 RFLQLIRDLPEVKLFFTLLY 353
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLMMEQVKDFAANVY 362
>gi|109072523|ref|XP_001091411.1| PREDICTED: peroxisomal biogenesis factor 3 [Macaca mulatta]
gi|62287020|sp|Q60HE1|PEX3_MACFA Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
gi|52782255|dbj|BAD51974.1| peroxisomal biogenesis factor 3 [Macaca fascicularis]
Length = 373
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 95/380 (25%), Positives = 175/380 (46%), Gaps = 47/380 (12%)
Query: 3 LVRGLW---RKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQ 59
++R +W ++H++K + T LG Y+L K R++ ERE A + I + +
Sbjct: 1 MLRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQAR 53
Query: 60 MKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNEL 119
+ HF++ Q + T L + L ++++++ S+ L PS KL++W +L
Sbjct: 54 RQYHFESNQRTCNMTVLS-MLPTLREALMQQLNSESLTALLKNR-----PSNKLEIWEDL 107
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQK 179
KI+SFTR +++++S ML + +RVQ+NI+G ++Y+D A +G + Q+
Sbjct: 108 KIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKN---GTTILAPPDVQQQ 163
Query: 180 FLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDV-------- 231
+L+S L G+ LI+ ++ AV+++L LK L+ L + + I ++
Sbjct: 164 YLSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSS 223
Query: 232 -FMSTGSPHHWVDYLMMSQXXXXXXXXXXXXXXKFHL--LITETREVLTSNDFSNVAEIS 288
GS Y+M + L+ ETR++L S DFS V
Sbjct: 224 WINKDGSKSLLCHYMMPDEETPLAVQACGLSPRDITTIKLLNETRDMLESPDFSTVLNTC 283
Query: 289 LKCCAVALVEEME-----TQTGLATG----------MQLAKLLPQIEKTMPEISAEPEKN 333
L L++ M T+ L G + LAK++P + + + +E +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TPS 342
Query: 334 RFLQLIRDLPEVKLFFTLLY 353
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLTMEQVKDFAANVY 362
>gi|60834063|gb|AAX37078.1| peroxisomal biogenesis factor 3 [synthetic construct]
Length = 374
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 96/381 (25%), Positives = 176/381 (46%), Gaps = 49/381 (12%)
Query: 3 LVRGLW---RKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQ 59
++R +W ++H++K + T LG Y+L K R++ ERE A + I + +
Sbjct: 1 MLRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQAR 53
Query: 60 MKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNEL 119
+ HF++ Q + T L + L ++++++ S+ L PS KL++W +L
Sbjct: 54 RQYHFESNQRTCNMTVLS-MLPTLREALMQQLNSESLTALLKNR-----PSNKLEIWEDL 107
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQK 179
KI+SFTR ++++S ML + +RVQ+NI+G ++Y+D A +G + Q+
Sbjct: 108 KIISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKN---GTTILAPPDVQQQ 163
Query: 180 FLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPH 239
+L+S L G+ LI+ ++ AV++VL LK L+ L + + I ++ S
Sbjct: 164 YLSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS- 222
Query: 240 HWVD----------YLMMSQXXXXXXXXXXXXXXKFHL--LITETREVLTSNDFSNVAEI 287
W++ Y+M + L+ ETR++L S DFS V
Sbjct: 223 SWINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTIKLLNETRDMLESPDFSTVLNT 282
Query: 288 SLKCCAVALVEEME-----TQTGLATG----------MQLAKLLPQIEKTMPEISAEPEK 332
L L++ M T+ L G + LAK++P + + + +E
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 341
Query: 333 NRFLQLIRDLPEVKLFFTLLY 353
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLTMEQVKDFAANVY 362
>gi|4505727|ref|NP_003621.1| peroxisomal biogenesis factor 3 [Homo sapiens]
gi|3914303|sp|P56589|PEX3_HUMAN Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
gi|3336882|emb|CAA04879.1| Pex3 protein [Homo sapiens]
gi|4092648|emb|CAA10362.1| PEX3 protein [Homo sapiens]
gi|4218426|emb|CAA08904.1| Pex3p [Homo sapiens]
gi|5817246|emb|CAB53744.1| peroxisomal biogenesis factor 3 [Homo sapiens]
gi|8926849|dbj|BAA97993.1| Pex3p [Homo sapiens]
gi|15778945|gb|AAH14551.1| Peroxisomal biogenesis factor 3 [Homo sapiens]
gi|15930134|gb|AAH15506.1| Peroxisomal biogenesis factor 3 [Homo sapiens]
gi|33415063|gb|AAQ18039.1| transformation-related protein 18 [Homo sapiens]
gi|49457077|emb|CAG46859.1| PEX3 [Homo sapiens]
gi|119568251|gb|EAW47866.1| peroxisomal biogenesis factor 3 [Homo sapiens]
Length = 373
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 96/381 (25%), Positives = 176/381 (46%), Gaps = 49/381 (12%)
Query: 3 LVRGLW---RKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQ 59
++R +W ++H++K + T LG Y+L K R++ ERE A + I + +
Sbjct: 1 MLRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQAR 53
Query: 60 MKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNEL 119
+ HF++ Q + T L + L ++++++ S+ L PS KL++W +L
Sbjct: 54 RQYHFESNQRTCNMTVLS-MLPTLREALMQQLNSESLTALLKNR-----PSNKLEIWEDL 107
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQK 179
KI+SFTR ++++S ML + +RVQ+NI+G ++Y+D A +G + Q+
Sbjct: 108 KIISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKN---GTTILAPPDVQQQ 163
Query: 180 FLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPH 239
+L+S L G+ LI+ ++ AV++VL LK L+ L + + I ++ S
Sbjct: 164 YLSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS- 222
Query: 240 HWVD----------YLMMSQXXXXXXXXXXXXXXKFHL--LITETREVLTSNDFSNVAEI 287
W++ Y+M + L+ ETR++L S DFS V
Sbjct: 223 SWINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTIKLLNETRDMLESPDFSTVLNT 282
Query: 288 SLKCCAVALVEEME-----TQTGLATG----------MQLAKLLPQIEKTMPEISAEPEK 332
L L++ M T+ L G + LAK++P + + + +E
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 341
Query: 333 NRFLQLIRDLPEVKLFFTLLY 353
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLTMEQVKDFAANVY 362
>gi|41055494|ref|NP_956522.1| peroxisomal biogenesis factor 3 [Danio rerio]
gi|28278477|gb|AAH46066.1| Peroxisomal biogenesis factor 3 [Danio rerio]
Length = 364
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 99/371 (26%), Positives = 166/371 (44%), Gaps = 53/371 (14%)
Query: 9 RKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDE-IIKTQMKAHFDNI 67
++H+RK + T +G YLL K RK+ +++ ERE E I + + + HF++
Sbjct: 10 KRHKRKFIFTGVFVGGVYLLGKYAQ---RKIQEMQ-----EREAAEYIAQARRQFHFESN 61
Query: 68 QMIADTTTLPH-------AIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Q + T L IHHL+S + L K K P+ KL++W +LK
Sbjct: 62 QRTCNMTVLSMLPTLREAIIHHLNSES---------LTTLLKTK----PANKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQKF 180
I+SFTR +++++S ML + +RVQ+NI+G +LY+D S Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYLYLDN-----SVTKNGMTPLAPPDVQQQY 163
Query: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
L+S L G+ LI+ ++ AV+EV LK L+ L + + +I + S +
Sbjct: 164 LSSIQHLLGEGLMELITVVKKAVQEVFGLVSLKQSLSLQELEQQLTQIRQLVEDDSSKYK 223
Query: 241 WVDYLMMSQXXXXXXXXX---XXXXXKFHLLITETREVLTSNDFSNVAEISLKCCAVALV 297
+ + MM L+ ETR++L S DF+ V L V +
Sbjct: 224 GLSWYMMPDEENTLASQACGLTENDVTTIKLLNETRDMLESPDFNIVLHTCLNRGFVRFL 283
Query: 298 EEM--------------ETQTGLA-TGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDL 342
+ M T L+ + LAK++P I + I +E + F+Q + +
Sbjct: 284 DNMAEFFRPPQRDSTPSSTPDQLSHVSLPLAKIIPIINGQIHSICSEI-PSHFVQDLLLI 342
Query: 343 PEVKLFFTLLY 353
+VK F +Y
Sbjct: 343 DQVKEFAANVY 353
>gi|125846558|ref|XP_001331521.1| PREDICTED: hypothetical protein [Danio rerio]
gi|55962647|emb|CAI11651.1| novel protein similar to vertebrate peroxisomal biogenesis factor 3
(PEX3) (zgc:56313) [Danio rerio]
Length = 364
Score = 91.7 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 99/371 (26%), Positives = 166/371 (44%), Gaps = 53/371 (14%)
Query: 9 RKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEII-KTQMKAHFDNI 67
++H+RK + T +G YLL K RK+ +++ ERE E I + + + HF++
Sbjct: 10 KRHKRKFIFTGVFVGGVYLLGKYAQ---RKIQEMQ-----EREAAEYIAQARRQFHFESN 61
Query: 68 QMIADTTTLPH-------AIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Q + T L IHHL+S + L K K P+ KL++W +LK
Sbjct: 62 QRTCNMTVLSMLPTLREAIIHHLNSES---------LTALLKTK----PANKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHXXXXXXXXXXXXXQKF 180
I+SFTR +++++S ML + +RVQ+NI+G +LY+D S Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYLYLDN-----SVTKNGMTPLAPPDVQQQY 163
Query: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
L+S L G+ LI+ ++ AV+EV LK L+ L + + +I + S +
Sbjct: 164 LSSIQHLLGEGLMELITVVKKAVQEVFGLVSLKQSLSLQELEQQLTQIRQLVEDDSSKYK 223
Query: 241 WVDYLMMSQXXXXXXXXX---XXXXXKFHLLITETREVLTSNDFSNVAEISLKCCAVALV 297
+ + MM L+ ETR++L S DF+ V L V +
Sbjct: 224 SLSWYMMPDEENTLASQACGLTENDVTTIKLLNETRDMLESPDFNIVLHTCLNRGFVRFL 283
Query: 298 EEM--------------ETQTGLA-TGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDL 342
+ M T L+ + LAK++P I + I +E + F+Q + +
Sbjct: 284 DNMAEFFRPPQRDSTPSSTPDQLSHVSLPLAKIIPIINGQIHSICSEI-PSHFVQDLLLI 342
Query: 343 PEVKLFFTLLY 353
+VK F +Y
Sbjct: 343 DQVKEFAANVY 353