BLASTP 2.2.17 [Aug-26-2007]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden, 
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= AT5G08470__[Arabidopsis_thaliana]
         (1130 letters)

Database: nr.pal 
           6,348,806 sequences; 2,166,943,470 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30682405|ref|NP_196464.2|  PEX1 (PEROXISOME 1); ATPase [A...  2056   0.0  
gi|9759341|dbj|BAB09996.1|  unnamed protein product [Arabido...  2033   0.0  
gi|12006272|gb|AAG44817.1|  peroxisome biogenesis protein PE...  2033   0.0  
gi|157354469|emb|CAO47095.1|  unnamed protein product [Vitis...  1128   0.0  
gi|42407935|dbj|BAD09074.1|  putative peroxisome biogenesis ...   798   0.0  
gi|115477761|ref|NP_001062476.1|  Os08g0556500 [Oryza sativa...   783   0.0  
gi|125562522|gb|EAZ07970.1|  hypothetical protein OsI_029202...   756   0.0  
gi|168057477|ref|XP_001780741.1|  predicted protein [Physcom...   532   e-149
gi|119890694|ref|XP_582113.3|  PREDICTED: similar to Pex1pL6...   308   2e-81
gi|73975782|ref|XP_860539.1|  PREDICTED: similar to peroxiso...   304   3e-80
gi|57095978|ref|XP_532459.1|  PREDICTED: similar to peroxiso...   304   3e-80
gi|157822837|ref|NP_001102690.1|  hypothetical protein LOC50...   304   3e-80
gi|66804599|ref|XP_636032.1|  peroxisomal biogenesis factor ...   303   4e-80
gi|169847347|ref|XP_001830385.1|  hypothetical protein CC1G_...   301   2e-79
gi|109067524|ref|XP_001101055.1|  PREDICTED: similar to pero...   298   1e-78
gi|119597250|gb|EAW76844.1|  peroxisome biogenesis factor 1,...   298   1e-78
gi|126341344|ref|XP_001368801.1|  PREDICTED: similar to pero...   298   2e-78
gi|4505725|ref|NP_000457.1|  peroxin1 [Homo sapiens] >gi|813...   298   2e-78
gi|14289173|dbj|BAB59062.1|  Pex1pL664P [Homo sapiens]            298   2e-78
gi|126341342|ref|XP_001368768.1|  PREDICTED: similar to pero...   298   2e-78
gi|114614480|ref|XP_519198.2|  PREDICTED: peroxin1 isoform 2...   298   2e-78
gi|158259371|dbj|BAF85644.1|  unnamed protein product [Homo ...   297   4e-78
gi|115676917|ref|XP_797089.2|  PREDICTED: similar to peroxis...   296   5e-78
gi|149705938|ref|XP_001493415.1|  PREDICTED: similar to Pex1...   296   9e-78
gi|118085819|ref|XP_418655.2|  PREDICTED: similar to peroxis...   295   1e-77
gi|14289175|dbj|BAB59063.1|  Pex1pG843D [Homo sapiens]            295   1e-77
gi|61657895|ref|NP_082053.1|  peroxin1 [Mus musculus] >gi|60...   293   5e-77
gi|158706385|sp|Q5BL07|PEX1_MOUSE  Peroxisome biogenesis fac...   293   7e-77
gi|146422078|ref|XP_001486981.1|  hypothetical protein PGUG_...   288   2e-75
gi|50303759|ref|XP_451825.1|  unnamed protein product [Kluyv...   287   3e-75
gi|50548791|ref|XP_501865.1|  YlPEX1 [Yarrowia lipolytica] >...   285   1e-74
gi|54648330|gb|AAH85054.1|  Unknown (protein for IMAGE:34005...   282   9e-74
gi|148232114|ref|NP_001085441.1|  MGC79116 protein [Xenopus ...   281   2e-73
gi|73975780|ref|XP_860512.1|  PREDICTED: similar to peroxiso...   281   2e-73
gi|125845312|ref|XP_001333763.1|  PREDICTED: similar to pero...   280   3e-73
gi|170098422|ref|XP_001880430.1|  predicted protein [Laccari...   280   6e-73
gi|149234964|ref|XP_001523361.1|  hypothetical protein LELG_...   279   8e-73
gi|50425389|ref|XP_461288.1|  hypothetical protein DEHA0F231...   278   2e-72
gi|109067526|ref|XP_001100851.1|  PREDICTED: similar to pero...   278   2e-72
gi|5817536|gb|AAD52811.1|AF129873_1  peroxin-1 [Pichia angusta]   278   2e-72
gi|6636328|gb|AAF20144.1|AF208231_1  peroxisome assembly pro...   278   2e-72
gi|68469032|ref|XP_721303.1|  peroxisomal biogenesis AAA ATP...   276   5e-72
gi|119597247|gb|EAW76841.1|  peroxisome biogenesis factor 1,...   276   6e-72
gi|14289171|dbj|BAB59061.1|  Pex1p-634del690 [Homo sapiens] ...   276   7e-72
gi|114614482|ref|XP_001167033.1|  PREDICTED: peroxin1 isofor...   275   1e-71
gi|71020215|ref|XP_760338.1|  hypothetical protein UM04191.1...   275   1e-71
gi|150865688|ref|XP_001385011.2|  AAA ATPase, peroxisomal bi...   274   3e-71
gi|156554837|ref|XP_001606441.1|  PREDICTED: similar to l(3)...   274   3e-71
gi|164662989|ref|XP_001732616.1|  hypothetical protein MGL_0...   273   6e-71
gi|58266798|ref|XP_570555.1|  hypothetical protein [Cryptoco...   273   7e-71
gi|1172019|sp|P46463|PEX1_PICPA  Peroxisome biosynthesis pro...   270   5e-70
gi|45198889|ref|NP_985918.1|  AFR371Wp [Ashbya gossypii ATCC...   268   3e-69
gi|116180898|ref|XP_001220298.1|  hypothetical protein CHGG_...   265   1e-68
gi|119177135|ref|XP_001240385.1|  hypothetical protein CIMG_...   265   2e-68
gi|156843219|ref|XP_001644678.1|  hypothetical protein Kpol_...   263   6e-68
gi|169783530|ref|XP_001826227.1|  [Aspergillus oryzae] >gi|8...   261   2e-67
gi|154275836|ref|XP_001538763.1|  hypothetical protein HCAG_...   259   8e-67
gi|46125453|ref|XP_387280.1|  hypothetical protein FG07104.1...   259   1e-66
gi|85111313|ref|XP_963877.1|  hypothetical protein NCU08118 ...   258   1e-66
gi|115395976|ref|XP_001213627.1|  hypothetical protein ATEG_...   258   2e-66
gi|149420087|ref|XP_001520628.1|  PREDICTED: similar to Pex1...   258   2e-66
gi|145252566|ref|XP_001397796.1|  hypothetical protein An16g...   256   6e-66
gi|47216156|emb|CAG10030.1|  unnamed protein product [Tetrao...   256   1e-65
gi|39958932|ref|XP_364454.1|  hypothetical protein MGG_09299...   255   2e-65
gi|169601378|ref|XP_001794111.1|  hypothetical protein SNOG_...   254   2e-65
gi|12856485|dbj|BAB30684.1|  unnamed protein product [Mus mu...   254   3e-65
gi|119597249|gb|EAW76843.1|  peroxisome biogenesis factor 1,...   253   6e-65
gi|1669371|gb|AAB46346.1|  ATPase; strong similarity to pero...   253   8e-65
gi|21355121|ref|NP_652016.1|  lethal (3) 70Da CG6760-PA [Dro...   251   3e-64
gi|5531245|emb|CAB51031.1|  l(3)70Da [Drosophila melanogaster]    251   3e-64
gi|9963891|gb|AAG09748.1|AF233276_1  peroxin-1 [Penicillium ...   250   4e-64
gi|119480941|ref|XP_001260499.1|  peroxisome biosynthesis pr...   249   7e-64
gi|172098|gb|AAA34842.1|  ATPase Pas1p                            249   8e-64
gi|6322651|ref|NP_012724.1|  AAA-peroxin that heterodimerize...   249   8e-64
gi|67539642|ref|XP_663595.1|  hypothetical protein AN5991.2 ...   249   9e-64
gi|110760891|ref|XP_397107.3|  PREDICTED: similar to lethal ...   249   9e-64
gi|159129424|gb|EDP54538.1|  peroxisome biosynthesis protein...   249   1e-63
gi|71001334|ref|XP_755348.1|  peroxisome biosynthesis protei...   248   1e-63
gi|121715414|ref|XP_001275316.1|  peroxisome biosynthesis pr...   248   2e-63
gi|125979019|ref|XP_001353542.1|  GA19842-PA [Drosophila pse...   248   2e-63
gi|151941464|gb|EDN59828.1|  AAA ATPase [Saccharomyces cerev...   248   2e-63
gi|119719589|ref|YP_920084.1|  AAA family ATPase, CDC48 subf...   245   2e-62
gi|170066059|ref|XP_001868111.1|  peroxisome biogenesis fact...   243   7e-62
gi|154314277|ref|XP_001556463.1|  hypothetical protein BC1G_...   243   8e-62
gi|156391074|ref|XP_001635594.1|  predicted protein [Nematos...   242   2e-61
gi|11498895|ref|NP_070126.1|  cell division control protein ...   241   2e-61
gi|156036132|ref|XP_001586177.1|  hypothetical protein SS1G_...   241   3e-61
gi|156938218|ref|YP_001436014.1|  AAA family ATPase, CDC48 s...   239   1e-60
gi|170289821|ref|YP_001736637.1|  AAA family ATPase, CDC48 s...   238   3e-60
gi|50289533|ref|XP_447198.1|  unnamed protein product [Candi...   236   6e-60
gi|161527613|ref|YP_001581439.1|  AAA family ATPase, CDC48 s...   236   8e-60
gi|19075270|ref|NP_587770.1|  AAA family ATPase Pex1 (predic...   234   2e-59
gi|148642702|ref|YP_001273215.1|  cell division control prot...   234   2e-59
gi|158287880|ref|XP_309769.4|  AGAP010924-PA [Anopheles gamb...   234   3e-59
gi|157111604|ref|XP_001651642.1|  peroxisome biogenesis fact...   234   3e-59
gi|124027197|ref|YP_001012517.1|  ATPases of AAA+ class, Spo...   234   4e-59
gi|126465619|ref|YP_001040728.1|  AAA family ATPase, CDC48 s...   231   2e-58
gi|156937486|ref|YP_001435282.1|  AAA family ATPase, CDC48 s...   231   2e-58
gi|109075576|ref|XP_001104133.1|  PREDICTED: similar to sper...   231   3e-58
gi|73984095|ref|XP_540960.2|  PREDICTED: similar to spermato...   230   4e-58
>gi|30682405|ref|NP_196464.2| PEX1 (PEROXISOME 1); ATPase [Arabidopsis thaliana]
          Length = 1130

 Score = 2056 bits (5327), Expect = 0.0,   Method: Composition-based stats.
 Identities = 1044/1130 (92%), Positives = 1044/1130 (92%)

Query: 1    MSRNRQIIIPDDVMETEAVVNTVAGVDCFVSLPRQLLHAXXXXXXXXXXXXXXVELRSGD 60
            MSRNRQIIIPDDVMETEAVVNTVAGVDCFVSLPRQLLHA              VELRSGD
Sbjct: 1    MSRNRQIIIPDDVMETEAVVNTVAGVDCFVSLPRQLLHALQSTSSSPLPPLLPVELRSGD 60

Query: 61   RRWSVAWXXXXXXXXAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWX 120
            RRWSVAW        AIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDW 
Sbjct: 61   RRWSVAWSGSSSSSSAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWE 120

Query: 121  XXXXXXXXXXXXXXSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAV 180
                          SQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAV
Sbjct: 121  VLELNAELAEAAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAV 180

Query: 181  APKRRDRNLKAKKSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPET 240
            APKRRDRNLKAKKSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPET
Sbjct: 181  APKRRDRNLKAKKSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPET 240

Query: 241  AKKHSLESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLV 300
            AKKHSLESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLV
Sbjct: 241  AKKHSLESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLV 300

Query: 301  FSDLAAKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVL 360
            FSDLAAKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVL
Sbjct: 301  FSDLAAKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVL 360

Query: 361  DKGTDRLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGL 420
            DKGTDRLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGL
Sbjct: 361  DKGTDRLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGL 420

Query: 421  EYLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESG 480
            EYLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESG
Sbjct: 421  EYLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESG 480

Query: 481  KKDKHTPLEILYVMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYL 540
            KKDKHTPLEILYVMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYL
Sbjct: 481  KKDKHTPLEILYVMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYL 540

Query: 541  KSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYG 600
            KSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYG
Sbjct: 541  KSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYG 600

Query: 601  PPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPS 660
            PPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPS
Sbjct: 601  PPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPS 660

Query: 661  VXXXXXXXXXXXXXXXTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQ 720
            V               TEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQ
Sbjct: 661  VIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQ 720

Query: 721  SLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYD 780
            SLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYD
Sbjct: 721  SLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYD 780

Query: 781  AYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGR 840
            AYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGR
Sbjct: 781  AYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGR 840

Query: 841  LGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
            LGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAA
Sbjct: 841  LGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAA 900

Query: 901  ACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGV 960
            ACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGV
Sbjct: 901  ACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGV 960

Query: 961  TDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXXXXXXXCDFPSPPERLEI 1020
            TDRVVNQFLTELDGVEVLTGVFVFAATS                    CDFPSPPERLEI
Sbjct: 961  TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEI 1020

Query: 1021 LTVLSRKLLMADDIDLEPIALMTEGFSGXXXXXXXXXXXXXXVHEYLNREDKPETGTTPI 1080
            LTVLSRKLLMADDIDLEPIALMTEGFSG              VHEYLNREDKPETGTTPI
Sbjct: 1021 LTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYLNREDKPETGTTPI 1080

Query: 1081 ITDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKSSREAKGKRATLA 1130
            ITDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKSSREAKGKRATLA
Sbjct: 1081 ITDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKSSREAKGKRATLA 1130
>gi|9759341|dbj|BAB09996.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1125

 Score = 2033 bits (5268), Expect = 0.0,   Method: Composition-based stats.
 Identities = 1032/1118 (92%), Positives = 1032/1118 (92%)

Query: 1    MSRNRQIIIPDDVMETEAVVNTVAGVDCFVSLPRQLLHAXXXXXXXXXXXXXXVELRSGD 60
            MSRNRQIIIPDDVMETEAVVNTVAGVDCFVSLPRQLLHA              VELRSGD
Sbjct: 1    MSRNRQIIIPDDVMETEAVVNTVAGVDCFVSLPRQLLHALQSTSSSPLPPLLPVELRSGD 60

Query: 61   RRWSVAWXXXXXXXXAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWX 120
            RRWSVAW        AIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDW 
Sbjct: 61   RRWSVAWSGSSSSSSAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWE 120

Query: 121  XXXXXXXXXXXXXXSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAV 180
                          SQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAV
Sbjct: 121  VLELNAELAEAAILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAV 180

Query: 181  APKRRDRNLKAKKSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPET 240
            APKRRDRNLKAKKSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPET
Sbjct: 181  APKRRDRNLKAKKSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPET 240

Query: 241  AKKHSLESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLV 300
            AKKHSLESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLV
Sbjct: 241  AKKHSLESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLV 300

Query: 301  FSDLAAKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVL 360
            FSDLAAKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVL
Sbjct: 301  FSDLAAKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVL 360

Query: 361  DKGTDRLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGL 420
            DKGTDRLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGL
Sbjct: 361  DKGTDRLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGL 420

Query: 421  EYLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESG 480
            EYLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESG
Sbjct: 421  EYLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESG 480

Query: 481  KKDKHTPLEILYVMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYL 540
            KKDKHTPLEILYVMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYL
Sbjct: 481  KKDKHTPLEILYVMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYL 540

Query: 541  KSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYG 600
            KSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYG
Sbjct: 541  KSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYG 600

Query: 601  PPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPS 660
            PPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPS
Sbjct: 601  PPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPS 660

Query: 661  VXXXXXXXXXXXXXXXTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQ 720
            V               TEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQ
Sbjct: 661  VIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQ 720

Query: 721  SLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYD 780
            SLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYD
Sbjct: 721  SLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYD 780

Query: 781  AYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGR 840
            AYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGR
Sbjct: 781  AYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGR 840

Query: 841  LGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
            LGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAA
Sbjct: 841  LGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAA 900

Query: 901  ACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGV 960
            ACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGV
Sbjct: 901  ACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGV 960

Query: 961  TDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXXXXXXXCDFPSPPERLEI 1020
            TDRVVNQFLTELDGVEVLTGVFVFAATS                    CDFPSPPERLEI
Sbjct: 961  TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEI 1020

Query: 1021 LTVLSRKLLMADDIDLEPIALMTEGFSGXXXXXXXXXXXXXXVHEYLNREDKPETGTTPI 1080
            LTVLSRKLLMADDIDLEPIALMTEGFSG              VHEYLNREDKPETGTTPI
Sbjct: 1021 LTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYLNREDKPETGTTPI 1080

Query: 1081 ITDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKS 1118
            ITDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKS
Sbjct: 1081 ITDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKS 1118
>gi|12006272|gb|AAG44817.1| peroxisome biogenesis protein PEX1 [Arabidopsis thaliana]
          Length = 1119

 Score = 2033 bits (5266), Expect = 0.0,   Method: Composition-based stats.
 Identities = 1033/1119 (92%), Positives = 1033/1119 (92%)

Query: 12   DVMETEAVVNTVAGVDCFVSLPRQLLHAXXXXXXXXXXXXXXVELRSGDRRWSVAWXXXX 71
            DVMETEAVVNTVAGVDCFVSLPRQLLHA              VELRSGDRRWSVAW    
Sbjct: 1    DVMETEAVVNTVAGVDCFVSLPRQLLHALQSTSSSPLPPLLPVELRSGDRRWSVAWSGSS 60

Query: 72   XXXXAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXX 131
                AIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDW            
Sbjct: 61   SSSSAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELNAELAEA 120

Query: 132  XXXSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLKA 191
               SQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLKA
Sbjct: 121  AILSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLKA 180

Query: 192  KKSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKHSLESLQL 251
            KKSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKHSLESLQL
Sbjct: 181  KKSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKHSLESLQL 240

Query: 252  ISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDLAAKGHLM 311
            ISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDLAAKGHLM
Sbjct: 241  ISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDLAAKGHLM 300

Query: 312  MVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGTDRLGNNN 371
            MVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGTDRLGNNN
Sbjct: 301  MVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGTDRLGNNN 360

Query: 372  SVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGLEYLTRLWSLAQ 431
            SVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGLEYLTRLWSLAQ
Sbjct: 361  SVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGLEYLTRLWSLAQ 420

Query: 432  LDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGKKDKHTPLEIL 491
            LDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGKKDKHTPLEIL
Sbjct: 421  LDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGKKDKHTPLEIL 480

Query: 492  YVMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYLKSAKETHCNKG 551
            YVMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYLKSAKETHCNKG
Sbjct: 481  YVMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYLKSAKETHCNKG 540

Query: 552  VSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYGPPGSGKTILAR 611
            VSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYGPPGSGKTILAR
Sbjct: 541  VSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYGPPGSGKTILAR 600

Query: 612  AAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVXXXXXXXXXX 671
            AAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSV          
Sbjct: 601  AAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVIILDDLDSII 660

Query: 672  XXXXXTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSS 731
                 TEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSS
Sbjct: 661  SSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSS 720

Query: 732  SGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYDAYDLEILVDRA 791
            SGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYDAYDLEILVDRA
Sbjct: 721  SGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYDAYDLEILVDRA 780

Query: 792  VHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTD 851
            VHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTD
Sbjct: 781  VHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTD 840

Query: 852  IKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKG 911
            IKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKG
Sbjct: 841  IKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKG 900

Query: 912  PELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTE 971
            PELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTE
Sbjct: 901  PELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTE 960

Query: 972  LDGVEVLTGVFVFAATSXXXXXXXXXXXXXXXXXXXXCDFPSPPERLEILTVLSRKLLMA 1031
            LDGVEVLTGVFVFAATS                    CDFPSPPERLEILTVLSRKLLMA
Sbjct: 961  LDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMA 1020

Query: 1032 DDIDLEPIALMTEGFSGXXXXXXXXXXXXXXVHEYLNREDKPETGTTPIITDPLLKSIAS 1091
            DDIDLEPIALMTEGFSG              VHEYLNREDKPETGTTPIITDPLLKSIAS
Sbjct: 1021 DDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYLNREDKPETGTTPIITDPLLKSIAS 1080

Query: 1092 KTKPSVSETEKQKLYDIYSQFLDSRKSSREAKGKRATLA 1130
            KTKPSVSETEKQKLYDIYSQFLDSRKSSREAKGKRATLA
Sbjct: 1081 KTKPSVSETEKQKLYDIYSQFLDSRKSSREAKGKRATLA 1119
>gi|157354469|emb|CAO47095.1| unnamed protein product [Vitis vinifera]
          Length = 1067

 Score = 1128 bits (2917), Expect = 0.0,   Method: Composition-based stats.
 Identities = 601/1072 (56%), Positives = 745/1072 (69%), Gaps = 53/1072 (4%)

Query: 79   IARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVR 138
            +AR FAE ISLPD T V+VR + N+PKATLVT+EP TEDDW                Q+ 
Sbjct: 29   VARQFAECISLPDHTAVQVRAVANLPKATLVTIEPHTEDDWEVLELNAEHAEAAILKQIG 88

Query: 139  ILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLKAKKSQEKE 198
            I+HE M+FPLWLH RT I F VVSTFP K VVQLVPGTEVAVAPKRR + L + K+   +
Sbjct: 89   IVHEAMRFPLWLHGRTTITFLVVSTFPKKAVVQLVPGTEVAVAPKRRKKYLDSHKNALVQ 148

Query: 199  CNN-----VKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKHSLESLQLIS 253
             +N      KALLRVQ++ +   H+++VKG EL V LT++ YIHPETA+ +S +SLQL+ 
Sbjct: 149  SSNKDHPIAKALLRVQDSGQKLIHKSEVKGVELGVVLTNVVYIHPETARNYSFDSLQLVI 208

Query: 254  VSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDLAAKGHLMMV 313
            + PR P KG+    +    K+   +K   +G +  KKEP Q ++RL+ S+  AKGH+MM 
Sbjct: 209  LVPRSPSKGNYNDTDMFRKKSISTAKEFSDGLAD-KKEPCQVVVRLLISESVAKGHVMMA 267

Query: 314  ESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKG----TDRLGN 369
            +SLR YL  GLHSWVY++ C++N  KEI  LSLSPC FK+ E  K L++      D L N
Sbjct: 268  QSLRHYLRTGLHSWVYMKRCDINLKKEISLLSLSPCQFKMFEKNKALEENGLEVLDSLTN 327

Query: 370  NNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALS--SEGLHDE--GNHDKNKKGLEYLTR 425
            + +  KS    +   TY+++ DWS H++   ALS  S G  DE   +   ++KGL+ L +
Sbjct: 328  HKT--KSMLLETNSDTYMNISDWSTHEEFAAALSFESPGSEDEKTSSQSGSRKGLQSLLQ 385

Query: 426  LWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGKKDKH 485
             W LA LDA+ S  G ++ SL+VG ET  HF V   ++Y  +                  
Sbjct: 386  AWFLAHLDAINSNAGTEIDSLVVGNETLLHFNVTS-DNYGDLS----------------- 427

Query: 486  TPLEILYVMTVSDESLLGDKFAGYDLSL-DRSEKSDNVVHIEPVLEKMNLGEPIYLKSAK 544
              +EILY++ +S+ES    KF  Y+LS  +R+++++N+ ++E ++  + L          
Sbjct: 428  --VEILYILAISEESQHSGKFNAYELSFPERNKRNNNLGNLELLVGNLRL---------- 475

Query: 545  ETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYGPPGS 604
            E    KG S   SSL+W+G   SD+I R+T LLSPA+GMWFS + +P PGH+LIYGPPGS
Sbjct: 476  ERTSAKGFSLTASSLSWIGTAASDIINRLTTLLSPASGMWFSTYNLPLPGHVLIYGPPGS 535

Query: 605  GKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVXXX 664
            GKT+LAR  AK  EEQ+DLL H++ VSCS LALEK   I   LSS +++ L+H PS+   
Sbjct: 536  GKTLLARTVAKALEEQEDLLTHIVFVSCSQLALEKAVTIRQALSSYLSDALDHVPSLVIF 595

Query: 665  XXXXXXXXXXXXTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQSLEQ 724
                         EG+Q S  VT LT++LTD++D+YGE R +SCGIGPLAF+AS QSLE 
Sbjct: 596  DDLDLIISSSSDLEGSQPSTSVTALTEYLTDILDEYGEKRKNSCGIGPLAFIASAQSLEN 655

Query: 725  IPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYDAYDL 784
            +PQ+LSSSGRFDFHVQL APA +ER AILKHEIQKR L C++DIL ++A+KC+GYDAYDL
Sbjct: 656  VPQSLSSSGRFDFHVQLPAPAATERMAILKHEIQKRSLQCADDILSDVASKCDGYDAYDL 715

Query: 785  EILVDRAVHAAIGRHLPLESNISKY---NLVKEDFTRAMHDFVPVAMRDITKSASEGGRL 841
            EILVDR +HAAIGR  P  S   K     LV++DF++AMH+F+PVAMRDITKSASEGGR 
Sbjct: 716  EILVDRTIHAAIGRFFPSNSAFDKSEKPTLVRDDFSQAMHEFLPVAMRDITKSASEGGRS 775

Query: 842  GWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAA 901
            GWEDVGG+ DI+NAIKEMIELPSKFP IFA+SPLRLRSNVLLYGPPGCGKTHIVGAAAAA
Sbjct: 776  GWEDVGGLVDIRNAIKEMIELPSKFPSIFAQSPLRLRSNVLLYGPPGCGKTHIVGAAAAA 835

Query: 902  CSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVT 961
            CSLRFISVKGPELLNKYIGASEQAVRDIF KA+AA+PC+LFFDEFDSIAPKRGHDNTGVT
Sbjct: 836  CSLRFISVKGPELLNKYIGASEQAVRDIFLKASAASPCLLFFDEFDSIAPKRGHDNTGVT 895

Query: 962  DRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXXXXXXXCDFPSPPERLEIL 1021
            DRVVNQFLTELDGVEVLTGVFVFAATS                    CDFPS  ERL+IL
Sbjct: 896  DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSRRERLDIL 955

Query: 1022 TVLSRKLLMADDIDLEPIALMTEGFSGXXXXXXXXXXXXXXVHEYLNREDKPETGTTPII 1081
            TVLSRKL +ADD+ ++ IA MTEGFSG              VHE L   D  E G  P+I
Sbjct: 956  TVLSRKLPLADDVAMDAIAYMTEGFSGADLQALLSDAQLAAVHEVLATADNKEPGKMPVI 1015

Query: 1082 TDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKS---SREAKGKRATLA 1130
            TD LLKS+ASK +PSVS+ EK++LY IY+QFLDS+KS   SR+AKGKRATLA
Sbjct: 1016 TDALLKSVASKARPSVSDAEKERLYTIYNQFLDSKKSTAQSRDAKGKRATLA 1067
>gi|42407935|dbj|BAD09074.1| putative peroxisome biogenesis protein PEX1 [Oryza sativa Japonica
            Group]
          Length = 1092

 Score =  798 bits (2062), Expect = 0.0,   Method: Composition-based stats.
 Identities = 488/1137 (42%), Positives = 670/1137 (58%), Gaps = 65/1137 (5%)

Query: 14   METEAVVNTVAGV-DCFVSLPRQLLHAXXXXXXX-XXXXXXXVELRSGDR----RWSVAW 67
            ME E  V  V G   CF +LP  L+HA               + LR+       RWS+AW
Sbjct: 1    MEVE--VRVVGGARSCFAALPLHLIHALSRTSVSGDLPPVLALHLRAAATATAARWSLAW 58

Query: 68   XXXXXXXXAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXX 127
                    AIE+A+  AE ISLPDGTV ++ V  ++ KA  V +EP +EDDW        
Sbjct: 59   SGAASRSSAIEVAQELAECISLPDGTVAQLSVARSLAKADSVCIEPFSEDDWEILESRAD 118

Query: 128  XXXXXXXSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDR 187
                   +QV +++E MKFPLWL    +++F V S+ P K +VQLVPGTEVAVAPK+R  
Sbjct: 119  LAEETILTQVGVVYEGMKFPLWLDGHNIVKFVVTSSSPKKSLVQLVPGTEVAVAPKKRRE 178

Query: 188  NLKA---KKSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKH 244
            N      K+S  KE    KALLRVQ  DR   H+   KG EL V L+    +HP+TA + 
Sbjct: 179  NSSQDVQKQSALKEEAQTKALLRVQAADRKYVHKFKYKGVELGVILSYAVLVHPDTAARA 238

Query: 245  SLESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDL 304
            S+ +LQL++VS +   K  A+K + +  K          G    K+  R+ ++ ++FSD 
Sbjct: 239  SISNLQLVTVSSKSSPKRLAQKGKEVTQKK---------GILLPKERVREVVVYILFSDS 289

Query: 305  AAKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGT 364
             +KGH+M+  S+R Y+ A +HSWVY++  + N   + P L++SP  FK+   EKV   G+
Sbjct: 290  VSKGHVMLPHSIRHYISADIHSWVYVKTFSANVKNDQPILTISPLHFKM--QEKVAHDGS 347

Query: 365  DRLGNN--NSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGLEY 422
            + LG+   N  RK+S P      + +   +  +D V++        D  N  ++    + 
Sbjct: 348  E-LGSQEANIWRKTSIPSENRDPFQEA-HFGNNDDVLST-------DVDNTSESILEHKI 398

Query: 423  LTRLWSLAQLDAMA-SVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGK 481
            L + W + QL  M   V   ++S +++  +   HFE              +V+ +   GK
Sbjct: 399  LIKQWLVGQLKDMGLHVGNSEISPVVLPTKVLLHFE--------------AVDQKHNRGK 444

Query: 482  KDKHTPLEILYVMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYLK 541
                   E LY++ V  E+       G +  L  S ++D++ ++E    ++ LGEP +  
Sbjct: 445  -------EFLYLLKVGFENSSYSNSQG-NAELSWSIQTDDLENLELKFGRLELGEPEFFN 496

Query: 542  SAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYGP 601
            S  +   + G     SSL WM   +SDV KR++VLLS  +   F + K+P PGH+L+ GP
Sbjct: 497  SVLDDGFSNGFKLTRSSLGWMENAMSDVTKRLSVLLSSTSLRLFDQLKLPFPGHVLVLGP 556

Query: 602  PGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSV 661
             GSGKT L RAAAKYFE+ K++LAHVI + CS L + K +     +   I+E L HAPSV
Sbjct: 557  RGSGKTALVRAAAKYFEDHKEILAHVIYIDCSKLTVGKAKETKQTIEDSISEALLHAPSV 616

Query: 662  XXXXXXXXXXXXXXXTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQS 721
                            +  Q+S     + ++L D++D+Y +   ++CG GP+A +AS QS
Sbjct: 617  ILFDDMDNVVSVSSDPQAPQSSSSSDSIVRYLADIMDEYKDKAQNACGYGPIALMASAQS 676

Query: 722  LEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYDA 781
            L+ +PQ L+SSGRFDFHV+L   A  ER A+LKH +++  L CS+++L  +A+KC+GYDA
Sbjct: 677  LQSLPQDLTSSGRFDFHVELPVLAIPEREALLKHHVEEHELQCSKEVLSEIASKCDGYDA 736

Query: 782  YDLEILVDRAVHAAIGRH-LPLES--NISKYNLVKEDFTRAMHDFVPVAMRDITKSASEG 838
            YDL+ILVDRAVHAA  R  LP  +  N ++  LVKEDF +A+HDF+PVAMRD++K A   
Sbjct: 737  YDLDILVDRAVHAAASRFVLPSSASVNCAEPTLVKEDFLKAIHDFLPVAMRDLSKYAPAD 796

Query: 839  GRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAA 898
            G  GWEDVGG+ +    IKE +ELPSK+P IF K+P+RLRSN+LLYGP GCGKTHIVGAA
Sbjct: 797  GEGGWEDVGGLNEAVTIIKETLELPSKYPNIFTKAPVRLRSNILLYGPSGCGKTHIVGAA 856

Query: 899  AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNT 958
            AAACSLRFISVKGPELLNKYIG+SEQ+VRD F+KAAAAAPC+LFFDEF+SIAP+RG  + 
Sbjct: 857  AAACSLRFISVKGPELLNKYIGSSEQSVRDFFAKAAAAAPCLLFFDEFESIAPQRGTQSA 916

Query: 959  GVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXXXXXXXCDFPSPPERL 1018
            GV+DRVVNQFLTELDGVE LTGVFVFAATS                    CDFP   ERL
Sbjct: 917  GVSDRVVNQFLTELDGVESLTGVFVFAATSKPQSIDAALLRPGRFDRLILCDFPGWHERL 976

Query: 1019 EILTVLSRKLLMADDIDLEPIALMTEGFSGXXXXXXXXXXXXXXVHEYLNREDKPETGTT 1078
            EIL V SR++ +A D  LE +A +TEGF+G              VH+ L   +   + T 
Sbjct: 977  EILKVHSREVSLASDASLEEVASLTEGFTGADLAAILRDAKLAAVHKVLEDRNNGISDTQ 1036

Query: 1079 PIITDPLLKSIASKTKPSVSETEKQKLYDI-YSQFLDSRKS----SREAKGKRATLA 1130
            P I+  LL S A + +PS S  +K + YD+ + QF+ SRKS    +RE+KGK+ TLA
Sbjct: 1037 PCISKELLISTAREARPSTSAEQKMQ-YDMDFGQFVSSRKSVSTKARESKGKKVTLA 1092
>gi|115477761|ref|NP_001062476.1| Os08g0556500 [Oryza sativa (japonica cultivar-group)]
 gi|113624445|dbj|BAF24390.1| Os08g0556500 [Oryza sativa (japonica cultivar-group)]
 gi|125604303|gb|EAZ43628.1| hypothetical protein OsJ_027111 [Oryza sativa (japonica
            cultivar-group)]
          Length = 1082

 Score =  783 bits (2021), Expect = 0.0,   Method: Composition-based stats.
 Identities = 484/1137 (42%), Positives = 665/1137 (58%), Gaps = 75/1137 (6%)

Query: 14   METEAVVNTVAGV-DCFVSLPRQLLHAXXXXXXX-XXXXXXXVELRSGDR----RWSVAW 67
            ME E  V  V G   CF +LP  L+HA               + LR+       RWS+AW
Sbjct: 1    MEVE--VRVVGGARSCFAALPLHLIHALSRTSVSGDLPPVLALHLRAAATATAARWSLAW 58

Query: 68   XXXXXXXXAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXX 127
                    AIE+A+  AE ISLPDGTV ++ V  ++ KA  V +EP +EDDW        
Sbjct: 59   SGAASRSSAIEVAQELAECISLPDGTVAQLSVARSLAKADSVCIEPFSEDDWEILESRAD 118

Query: 128  XXXXXXXSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDR 187
                   +QV +++E MKFPLWL    +++F V S+ P K +VQLVPGTEVAVAPK+R  
Sbjct: 119  LAEETILTQVGVVYEGMKFPLWLDGHNIVKFVVTSSSPKKSLVQLVPGTEVAVAPKKRRE 178

Query: 188  NLKA---KKSQEKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKH 244
            N      K+S  KE    KALLRVQ  DR   H+   KG EL V L+    +HP+TA + 
Sbjct: 179  NSSQDVQKQSALKEEAQTKALLRVQAADRKYVHKFKYKGVELGVILSYAVLVHPDTAARA 238

Query: 245  SLESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDL 304
            S+ +LQL++VS +   K  A+K + +  K          G    K+  R+ ++ ++FSD 
Sbjct: 239  SISNLQLVTVSSKSSPKRLAQKGKEVTQKK---------GILLPKERVREVVVYILFSDS 289

Query: 305  AAKGHLMMVESLRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGT 364
             +KGH+M+  S+R Y+ A +HSWVY++  + N   + P L++SP  FK+   EKV   G+
Sbjct: 290  VSKGHVMLPHSIRHYISADIHSWVYVKTFSANVKNDQPILTISPLHFKM--QEKVAHDGS 347

Query: 365  DRLGNN--NSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGLEY 422
            + LG+   N  RK+S P      + +   +  +D V++        D  N  ++    + 
Sbjct: 348  E-LGSQEANIWRKTSIPSENRDPFQEA-HFGNNDDVLST-------DVDNTSESILEHKI 398

Query: 423  LTRLWSLAQLDAMA-SVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGK 481
            L + W + QL  M   V   ++S +++  +   HFE              +V+ +   GK
Sbjct: 399  LIKQWLVGQLKDMGLHVGNSEISPVVLPTKVLLHFE--------------AVDQKHNRGK 444

Query: 482  KDKHTPLEILYVMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYLK 541
                   E LY++ V  E+       G +  L  S ++D++ ++E    ++ L +     
Sbjct: 445  -------EFLYLLKVGFENSSYSNSQG-NAELSWSIQTDDLENLELKFGRLELDDGF--- 493

Query: 542  SAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYGP 601
                   + G     SSL WM   +SDV KR++VLLS  +   F + K+P PGH+L+ GP
Sbjct: 494  -------SNGFKLTRSSLGWMENAMSDVTKRLSVLLSSTSLRLFDQLKLPFPGHVLVLGP 546

Query: 602  PGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSV 661
             GSGKT L RAAAKYFE+ K++LAHVI + CS L + K +     +   I+E L HAPSV
Sbjct: 547  RGSGKTALVRAAAKYFEDHKEILAHVIYIDCSKLTVGKAKETKQTIEDSISEALLHAPSV 606

Query: 662  XXXXXXXXXXXXXXXTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQS 721
                            +  Q+S     + ++L D++D+Y +   ++CG GP+A +AS QS
Sbjct: 607  ILFDDMDNVVSVSSDPQAPQSSSSSDSIVRYLADIMDEYKDKAQNACGYGPIALMASAQS 666

Query: 722  LEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYDA 781
            L+ +PQ L+SSGRFDFHV+L   A  ER A+LKH +++  L CS+++L  +A+KC+GYDA
Sbjct: 667  LQSLPQDLTSSGRFDFHVELPVLAIPEREALLKHHVEEHELQCSKEVLSEIASKCDGYDA 726

Query: 782  YDLEILVDRAVHAAIGRH-LPLES--NISKYNLVKEDFTRAMHDFVPVAMRDITKSASEG 838
            YDL+ILVDRAVHAA  R  LP  +  N ++  LVKEDF +A+HDF+PVAMRD++K A   
Sbjct: 727  YDLDILVDRAVHAAASRFVLPSSASVNCAEPTLVKEDFLKAIHDFLPVAMRDLSKYAPAD 786

Query: 839  GRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAA 898
            G  GWEDVGG+ +    IKE +ELPSK+P IF K+P+RLRSN+LLYGP GCGKTHIVGAA
Sbjct: 787  GEGGWEDVGGLNEAVTIIKETLELPSKYPNIFTKAPVRLRSNILLYGPSGCGKTHIVGAA 846

Query: 899  AAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNT 958
            AAACSLRFISVKGPELLNKYIG+SEQ+VRD F+KAAAAAPC+LFFDEF+SIAP+RG  + 
Sbjct: 847  AAACSLRFISVKGPELLNKYIGSSEQSVRDFFAKAAAAAPCLLFFDEFESIAPQRGTQSA 906

Query: 959  GVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXXXXXXXCDFPSPPERL 1018
            GV+DRVVNQFLTELDGVE LTGVFVFAATS                    CDFP   ERL
Sbjct: 907  GVSDRVVNQFLTELDGVESLTGVFVFAATSKPQSIDAALLRPGRFDRLILCDFPGWHERL 966

Query: 1019 EILTVLSRKLLMADDIDLEPIALMTEGFSGXXXXXXXXXXXXXXVHEYLNREDKPETGTT 1078
            EIL V SR++ +A D  LE +A +TEGF+G              VH+ L   +   + T 
Sbjct: 967  EILKVHSREVSLASDASLEEVASLTEGFTGADLAAILRDAKLAAVHKVLEDRNNGISDTQ 1026

Query: 1079 PIITDPLLKSIASKTKPSVSETEKQKLYDI-YSQFLDSRKS----SREAKGKRATLA 1130
            P I+  LL S A + +PS S  +K + YD+ + QF+ SRKS    +RE+KGK+ TLA
Sbjct: 1027 PCISKELLISTAREARPSTSAEQKMQ-YDMDFGQFVSSRKSVSTKARESKGKKVTLA 1082
>gi|125562522|gb|EAZ07970.1| hypothetical protein OsI_029202 [Oryza sativa (indica
            cultivar-group)]
          Length = 1742

 Score =  756 bits (1952), Expect = 0.0,   Method: Composition-based stats.
 Identities = 453/1050 (43%), Positives = 625/1050 (59%), Gaps = 63/1050 (6%)

Query: 79   IARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVR 138
            +A+  AE ISLPDGTV ++ V  ++ KA  V +EP +EDDW               +QV 
Sbjct: 698  VAQELAECISLPDGTVAQLSVARSLAKADSVCIEPFSEDDWEILESRADLAEETILTQVG 757

Query: 139  ILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLKA---KKSQ 195
            +++E MKFPLWL    +++F V S+ P K +VQLVPGTEVAVAPK+R  N      K+S 
Sbjct: 758  VVYEGMKFPLWLDGHNIVKFVVTSSSPKKSLVQLVPGTEVAVAPKKRRENSSQDVQKQSA 817

Query: 196  EKECNNVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETAKKHSLESLQLISVS 255
             KE    KALLRVQ  DR   H+   KG EL V L+    +HP+TA + S+ +LQL++VS
Sbjct: 818  LKEEAQTKALLRVQAADRKYVHKFKYKGVELGVILSYAVLVHPDTAARASISNLQLVTVS 877

Query: 256  PRIPLKGSAKKDEALNMKNSEASKVAENGTSSAKKEPRQAILRLVFSDLAAKGHLMMVES 315
             +   K  A+K + +  K          G    K+  R+ ++ ++FSD  +KGH+M+  S
Sbjct: 878  SKSSPKRLAQKGKEVTQKK---------GILLPKERVREVVVYILFSDSVSKGHVMLPHS 928

Query: 316  LRLYLGAGLHSWVYLRGCNVNEDKEIPALSLSPCVFKISENEKVLDKGTDRLGNN--NSV 373
             R Y+ A +HSWVY++  + N   + P L++SP  FK+   EKV   G++ LG+   N  
Sbjct: 929  TRHYISADIHSWVYVKTFSANVKNDQPILTISPLHFKM--QEKVAHDGSE-LGSQEANIW 985

Query: 374  RKSSHPPSGLSTYVDVVDWSVHDKVVTALSSEGLHDEGNHDKNKKGLEYLTRLWSLAQLD 433
            RK+S P      + +   +  +D V++        D  N  ++    + L + W + QL 
Sbjct: 986  RKTSIPSENRDPFQEA-HFGNNDDVLST-------DVDNTSESILEHKILIKQWLVGQLK 1037

Query: 434  AMA-SVTGVDVSSLIVGRETFFHFEVRGLESYKSIDGQPSVNDRWESGKKDKHTPLEILY 492
             M   V   ++S +++  +   HFE              +V+ +   GK       E LY
Sbjct: 1038 DMGLHVGNSEISPVVLPTKVLLHFE--------------AVDQKHNRGK-------EFLY 1076

Query: 493  VMTVSDESLLGDKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYLKSAKETHCNKGV 552
            ++ V  E+       G +  L  S ++D++ ++E    ++ L +            + G 
Sbjct: 1077 LLKVGFENSSYSNSQG-NAELSWSIQTDDLENLELKFGRLELDDGF----------SNGF 1125

Query: 553  SPDISSLTWMGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYGPPGSGKTILARA 612
                SSL WM   +SDV KR++VLLS  +   F + K+P PGH+L+ GP GSGKT L RA
Sbjct: 1126 KLTRSSLGWMENAMSDVTKRLSVLLSSTSLRLFDQLKLPFPGHVLVLGPRGSGKTALVRA 1185

Query: 613  AAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVXXXXXXXXXXX 672
            AAKYFE+ K++LAHVI + CS L + K +     +   I+E L HAPSV           
Sbjct: 1186 AAKYFEDHKEILAHVIYIDCSKLTVGKAKETKQTIEDSISEALLHAPSVILFDDMDNVVS 1245

Query: 673  XXXXTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSSS 732
                 +  Q+S     + ++L D++D+Y +   ++CG GP+A +AS QSL+ +PQ L+SS
Sbjct: 1246 VSSDPQAPQSSSSSDSIVRYLVDIMDEYKDKARNACGYGPIALMASAQSLQSLPQDLTSS 1305

Query: 733  GRFDFHVQLAAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYDAYDLEILVDRAV 792
            GRFDFHV+L   A  ER A+LKH +++  L CS+++L  +A+KC+GYDAYDL+ILVDRAV
Sbjct: 1306 GRFDFHVELPVLAIPEREALLKHHVEEHELQCSKEVLSEIASKCDGYDAYDLDILVDRAV 1365

Query: 793  HAAIGRH-LPLES--NISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGV 849
            HAA  R  LP  +  N ++  LVKEDF +A+HDF+PVAMRD++K A   G  GWEDVGG+
Sbjct: 1366 HAAASRFVLPSSASVNCAEPTLVKEDFLKAIHDFLPVAMRDLSKYAPADGEGGWEDVGGL 1425

Query: 850  TDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
             +    IKE +ELPSK+P IF K+P+RLRSN+LLYGP GCGKTHIVGAAAAACSLRFISV
Sbjct: 1426 NEAVTIIKETLELPSKYPNIFTKAPVRLRSNILLYGPSGCGKTHIVGAAAAACSLRFISV 1485

Query: 910  KGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFL 969
            KGPELLNKYIG+SEQ+VRD F+KAAAAAPC+LFFDEF+SIAP+RG  + GV+DRVVNQFL
Sbjct: 1486 KGPELLNKYIGSSEQSVRDFFAKAAAAAPCLLFFDEFESIAPQRGTQSAGVSDRVVNQFL 1545

Query: 970  TELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXXXXXXXCDFPSPPERLEILTVLSRKLL 1029
            TELDGVE LTGVFVFAATS                    CDFP   ERLEIL V SR++ 
Sbjct: 1546 TELDGVESLTGVFVFAATSKPQSIDAALLRPGRFDRLILCDFPGWHERLEILKVHSREVS 1605

Query: 1030 MADDIDLEPIALMTEGFSGXXXXXXXXXXXXXXVHEYLNREDKPETGTTPIITDPLLKSI 1089
            +A D  LE +A +TEGF+G              VH+ L   +   + T P I+  LL S 
Sbjct: 1606 LASDASLEEVASLTEGFTGADLAAILRDAKLAAVHKVLEDRNNGISDTQPCISKELLIST 1665

Query: 1090 ASKTKPSVSETEKQKLYDI-YSQFLDSRKS 1118
            A + +PS S  +K + YD+ + QF+ SRKS
Sbjct: 1666 AREARPSTSAEQKMQ-YDMDFGQFVSSRKS 1694
>gi|168057477|ref|XP_001780741.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667830|gb|EDQ54450.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1292

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 401/1193 (33%), Positives = 582/1193 (48%), Gaps = 111/1193 (9%)

Query: 14   METEAVVNTVAGVDCFVSLPRQLLHAXXXXXXXXXXXXXXVELRSGDRR---WSVAWXXX 70
            ME E  V  V   DCF SLP  LL A              + L     R   W VAW   
Sbjct: 1    MEVE--VRRVGKQDCFASLPIPLLEAFLSEQMPSFPVVLELRLPGKKGRGGPWFVAWDGS 58

Query: 71   XXXXXAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXX 130
                  IE++  FA+ I L +GT V VR    V  A  V +EP +EDDW           
Sbjct: 59   ASRTSHIEVSEKFADCIGLENGTRVIVRARAEVAVADTVAIEPASEDDWEMLELNAEFLE 118

Query: 131  XXXXSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR----- 185
                ++V +L+E  +FP+W+   +V+     +T PSK +V+L  G E+ VAPK+R     
Sbjct: 119  EHLITRVGVLYEGQRFPVWIESGSVLLLQASTTSPSK-LVRLEAGAELIVAPKKRQVSTS 177

Query: 186  --DRNLKAKKSQEKECN--NVKALLRVQETDRSAFHEADVKGFELRVALTSIAYIHPETA 241
              D  + A+  +    +     A LRVQE   S      V         T+  ++ P TA
Sbjct: 178  SNDVKVSAENGKLDRASVWTGHAWLRVQELHPSLVQSVHVGELVCFSDPTTAMFLCPLTA 237

Query: 242  KKHSLESLQLISVSPRIPLKGSAKKDEALNMKNSEASKVAE---------NGTSSAKKEP 292
            KK  L   QL+++S        + K    N+++ E   V           NG    K   
Sbjct: 238  KKLRLSHGQLVTLSE------FSVKTRLHNLQSGEQESVFPTEADGFELGNGRVKVKTAG 291

Query: 293  RQAILRLVFSDLAAKGHLMMVESLRLYLGAGLHS------WVYLRGCNVNEDKEIPAL-S 345
            R+ ++R V +DLA  GH+M+ +SL+ YLG   H+       + +  C  +    +PAL  
Sbjct: 292  RRVVVRAVVTDLAKPGHIMLAQSLQTYLGLSCHASNASSAGIGIHSCG-DPSASMPALLE 350

Query: 346  LSPCVFKISEN--EKVLDKGTDRLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALS 403
              P VF+ +E   ++ L     R+     V +     S    ++  V  S  +  +  LS
Sbjct: 351  FFPAVFEETEENGDESLQVNKSRVHVGRKVERVLGRWSNHKEFLASVGESQRENGIHRLS 410

Query: 404  SEGLHDEGNHDKNKKGLEYLTRLWSLAQ-----------LDAMASVTGVDVSSLIVGRET 452
                 D  N ++ ++ +  L   W +AQ           L+    V+G  +  L   +++
Sbjct: 411  HN--EDVKNSEETQRSVTGLLHAWLVAQAAVFSCDAPSQLEKYVPVSGTTIVHLRPSQQS 468

Query: 453  FFHFEVRGLESYKSIDGQPSVNDR-------WESGKKDKHTPLEILYVMTVSDESLLGDK 505
                +     +++++      + +       +++   D  +P + L      DES L   
Sbjct: 469  VRIKDSESRGTHRALKSSVKQDQKDLLFLIGFQNHSNDGSSPTQALSNAATLDESNLYIM 528

Query: 506  FAGYDLSLDRSE----KSDNVVHIEPVLEKMNLGEPIYLKSAKETHCNKGVSPDISSLTW 561
                 + LD  E    K+   V     +  + +G    +     ++C +   P + SL W
Sbjct: 529  LES-QMFLDEQEPFSRKASGTVSDSKRILPVKVGSFETISCRSLSNCYETCGPTLFSLRW 587

Query: 562  MGPIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQK 621
            +G  +     R+ +LLSP      ++      G +L++GPP  GKT +A A A+  +   
Sbjct: 588  LGESLEKAFFRVKLLLSPT----ITRNCFDFTGTVLLHGPPACGKTTVALALARELQADP 643

Query: 622  DLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVXXXXXXXXXXXXXXXTEGTQ 681
             +LAH ++V C+ L  E+   I ++L   ++E L+HAP++                EG +
Sbjct: 644  SVLAHRVIVRCNKLVGEQASSIRNLLQDAVSEALDHAPALVILDDLDALLPKE---EGPE 700

Query: 682  ASVGVTMLTKFLTDVIDDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQL 741
             +  V  L +FL D++D    Y+    G+  +AF+A+ +S   IP +L  SGRFD+HV L
Sbjct: 701  PATAVMALAEFLGDLMD---LYQGGKQGM-KIAFLATARSPMAIPDSLCLSGRFDYHVDL 756

Query: 742  AAPATSERGAILKHEIQKRLLDCSEDILLNLAAKCEGYDAYDLEILVDRAVHAAIGRHLP 801
              PA SER  IL+  +  R   CS  +   +A   +G D  DL++LVDRA HAA  R L 
Sbjct: 757  PTPAASERATILEEAVAARGFLCSSSVASEVAMSFDGADRSDLDVLVDRAAHAAAARFLS 816

Query: 802  ----------------LESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWED 845
                            L S   K+ L   DF  A HDFVP AM+ I K   + GR GW+D
Sbjct: 817  PGATNESITEWLLNQSLSSRREKFELFSMDFKAAQHDFVPSAMQGIAKGGDQAGRSGWDD 876

Query: 846  VGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 905
            VGG+ + + A++E++ELP K+  +F  +PLRLRS VLLYGPPGCGKTHIVGAAAAACSLR
Sbjct: 877  VGGLLETRRALQEVLELPVKYGSMFKGAPLRLRSGVLLYGPPGCGKTHIVGAAAAACSLR 936

Query: 906  FISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVV 965
            FISVKGPELLNKYIGASEQAVRD+F+KAAAAAP +LFFDEFD+IAPKRGHDNTGVTDRVV
Sbjct: 937  FISVKGPELLNKYIGASEQAVRDVFAKAAAAAPALLFFDEFDAIAPKRGHDNTGVTDRVV 996

Query: 966  NQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXXXXXXX--------CDFPS---- 1013
            NQ LTELDGVE L GVFVFAATS                            C  P     
Sbjct: 997  NQLLTELDGVEALNGVFVFAATSQCLSYVLKFYSGYSSWLIMLRRLDHHFWCSRPDLLDA 1056

Query: 1014 ----PPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGXXXXXXXXXXXXXXVHEYL-N 1068
                P    ++    +++L  A+D+DL+ +A +T+GFS               VH +L N
Sbjct: 1057 ALLRPAPDEDVGVAGAQQLSFAEDVDLDTVAAITDGFSAADLQAVCSDAQLESVHTFLAN 1116

Query: 1069 REDKPETGTT--PIITDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDSRKSS 1119
            RE      +T  P+IT   L++ A   +PSV E E++KL DIY+ F+++R+++
Sbjct: 1117 REGTAPVDSTAKPLITMQHLQTAARNARPSVPEAERRKLNDIYASFMETRRTT 1169
>gi|119890694|ref|XP_582113.3| PREDICTED: similar to Pex1pL664P [Bos taurus]
          Length = 1281

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 191/468 (40%), Positives = 267/468 (57%), Gaps = 29/468 (6%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLL-AHVILVSCSTLALEKVQHIHHVLSSVIA 652
            G +L+ G  GSGK+ LA+A  K   E  D+L AHV ++ C  L  +++++I   L++  +
Sbjct: 592  GALLLTGGKGSGKSTLAKAICK---EAFDILDAHVEIIDCKALRGKRLENIQKTLAAAFS 648

Query: 653  EGLEHAPSVXXXXXXXXXXXXXXXTEGTQA--SVGVTMLTKFLTDVIDDYGEYRNSSCGI 710
            E L   PSV                E   +  +V    L   L D++ ++         +
Sbjct: 649  EALWRQPSVVLLDDLDLVVGRSALPEHEHSPEAVQSQRLAHALNDLVKEF-------ISM 701

Query: 711  GPL-AFVASVQSLEQI-PQTLSSSGRFDFH-VQLAAPATSERGAILKHEIQKRLLDCSED 767
            G L A +A+ QS   + P  +S+ G   F  VQ   P   ++   + H I K  LDC   
Sbjct: 702  GSLVALIATSQSQHSLHPLLVSAQGIHIFQCVQHIQPPDQDQRCEILHAIIKNKLDCDMK 761

Query: 768  I-----LLNLAAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKE--DFTRAM 820
                  L  +A + EG+ A D  +LVDRA+H+    HL  ++  ++  LV    DF +A+
Sbjct: 762  RFTGLDLQRIAKETEGFVARDFTMLVDRAIHS----HLSHQNVYTREELVLTTLDFQKAL 817

Query: 821  HDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSN 880
              F PV++R++         LGW+ +GG+ D++  + + I+LP+K+P++FA  P+R R+ 
Sbjct: 818  RGFTPVSLRNVNLHKPRD--LGWDRIGGLHDVRQILVDTIQLPAKYPELFANLPIRQRTG 875

Query: 881  VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCI 940
            VLLYGPPG GKT + G  A    + FISVKGPELL+KYIGASEQAVRD+F +A AA PCI
Sbjct: 876  VLLYGPPGTGKTLLAGVIAWESGMNFISVKGPELLSKYIGASEQAVRDVFVRAQAAKPCI 935

Query: 941  LFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXX 1000
            LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATS            
Sbjct: 936  LFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP 995

Query: 1001 XXXXXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSG 1048
                    C  P    RLEIL VLS  L +ADD+DL+ +A +T+ F+G
Sbjct: 996  GRLDKCVYCPPPDQASRLEILNVLSESLPLADDVDLQHVASLTDSFTG 1043

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 14/180 (7%)

Query: 27  DCFVSLPRQLLHAXXXXXXXXXXXXXXVELRSGDRRWSVAWXX----XXXXXXAIEIARV 82
           DCF+ LPR+L+                +E+  G +   ++W              EI R 
Sbjct: 25  DCFLHLPRRLV------AQLHLLQNQAIEVAWGHQPAFLSWVEGRHFSDEGENVAEINRQ 78

Query: 83  FAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVRILHE 142
             + + L +G  V ++   +V     V VEP + DDW                Q+RI+  
Sbjct: 79  VGQKLGLSNGAQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAASLEQHLLDQIRIVFP 138

Query: 143 TMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLKAKKSQEKECNNV 202
              FP+W+  +T I   + +  P     +L   + + + PK R    +AK+S   E  ++
Sbjct: 139 KAIFPVWVDQQTYIFIQIAALIPDAPYGRLETDSRLLIQPKTR----QAKESTFSEAEDI 194
>gi|73975782|ref|XP_860539.1| PREDICTED: similar to peroxisome biogenesis factor 1 isoform 3 [Canis
            familiaris]
          Length = 1227

 Score =  304 bits (779), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 210/559 (37%), Positives = 300/559 (53%), Gaps = 39/559 (6%)

Query: 504  DKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYLKSAKETHCNKGV-SPDISSLTWM 562
            DK   + LS +   K+   V ++P++++ N  E  ++    + +C  GV S  +SSL  +
Sbjct: 455  DKENIFLLSTNLLRKTTIQVLLDPMVKEENSEEIDFILPFLKLNCLGGVNSLGVSSLEHI 514

Query: 563  G-PIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQK 621
               ++   + R   L+S  AG+          G +L  G  GSGK+ LA+A  K  E   
Sbjct: 515  THSLLGRPLSRQ--LMSLVAGL--------RNGALLFTGGKGSGKSTLAKAICK--EASD 562

Query: 622  DLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVXXXXXXXXXXXXXXXTEGTQ 681
             L AHV +V C  L  +++++I   +    +E     PSV                E   
Sbjct: 563  TLDAHVEVVGCKALRGKRLENIQKTVELAFSEATWRQPSVILLDDLDLIVGVPAAPEHEH 622

Query: 682  A--SVGVTMLTKFLTDVIDDYGEYRNSSCGIGPL-AFVASVQSLEQI-PQTLSSSGRFDF 737
               +V    L   L+D++ ++         +G L A +A+ QS   + P  +S+ G   F
Sbjct: 623  GPEAVQSQRLAHALSDMMKEF-------ISMGSLVAVIATSQSQHSLHPWLVSAQGIHIF 675

Query: 738  H-VQLAAPATSERGAILKHEIQKRLLDCSEDILLNL-----AAKCEGYDAYDLEILVDRA 791
              VQ   P   E+   + H + K  LDC  +   NL     A + EG+ A D  +LVDRA
Sbjct: 676  QCVQHIQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVLVDRA 735

Query: 792  VHAAIGRHLPLESNISKYNLVKE--DFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGV 849
            +H+    HL  +   ++  LV    DF +A+  F+P ++R++         LGW+ +GG+
Sbjct: 736  IHS----HLSHQRITTREELVLTTLDFQKALQGFIPASLRNVNLHKPRD--LGWDKIGGL 789

Query: 850  TDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
             +++  + + I+LP+K+P++FA  P+R R  VLLYGPPG GKT + G  A    + FISV
Sbjct: 790  HEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISV 849

Query: 910  KGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFL 969
            KGPELL+KYIGASEQAVRDIF +A AA PCILFFDEF+SIAP+RGHDNTGVTDRVVNQ L
Sbjct: 850  KGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLL 909

Query: 970  TELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXXXXXXXCDFPSPPERLEILTVLSRKLL 1029
            T+LDGVE L GV+V AATS                    C  P    RLEIL VLS  L 
Sbjct: 910  TQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLP 969

Query: 1030 MADDIDLEPIALMTEGFSG 1048
            +ADD+DL+ +A +T  F+G
Sbjct: 970  LADDVDLQHVASVTNSFTG 988

 Score = 56.6 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 10/163 (6%)

Query: 27  DCFVSLPRQLLHAXXXXXXXXXXXXXXVELRSGDRRWSVAWXX----XXXXXXAIEIARV 82
           DCF+ LPR+L+                +E+  G +   ++W              EI R 
Sbjct: 26  DCFLRLPRRLV------AQLHLLQNQAIEVAWGHQPAFLSWVEGRHFSDQGENVAEINRH 79

Query: 83  FAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVRILHE 142
             + + L +G  V +++  +V     V VEP + DDW                Q+RI+  
Sbjct: 80  VGQKLGLSNGDQVFLKLCSHVVSCQQVEVEPLSADDWEILELHAASLEQHLLDQIRIVFP 139

Query: 143 TMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
              FP+W+  +T I   +V+  P+    +L   T++ + PK R
Sbjct: 140 KAIFPVWVDQQTYIFIQIVALMPTAAYGRLETDTKLLILPKTR 182
>gi|57095978|ref|XP_532459.1| PREDICTED: similar to peroxisome biogenesis factor 1 isoform 1 [Canis
            familiaris]
          Length = 1267

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 210/559 (37%), Positives = 300/559 (53%), Gaps = 39/559 (6%)

Query: 504  DKFAGYDLSLDRSEKSDNVVHIEPVLEKMNLGEPIYLKSAKETHCNKGV-SPDISSLTWM 562
            DK   + LS +   K+   V ++P++++ N  E  ++    + +C  GV S  +SSL  +
Sbjct: 495  DKENIFLLSTNLLRKTTIQVLLDPMVKEENSEEIDFILPFLKLNCLGGVNSLGVSSLEHI 554

Query: 563  G-PIVSDVIKRMTVLLSPAAGMWFSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQK 621
               ++   + R   L+S  AG+          G +L  G  GSGK+ LA+A  K  E   
Sbjct: 555  THSLLGRPLSRQ--LMSLVAGL--------RNGALLFTGGKGSGKSTLAKAICK--EASD 602

Query: 622  DLLAHVILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVXXXXXXXXXXXXXXXTEGTQ 681
             L AHV +V C  L  +++++I   +    +E     PSV                E   
Sbjct: 603  TLDAHVEVVGCKALRGKRLENIQKTVELAFSEATWRQPSVILLDDLDLIVGVPAAPEHEH 662

Query: 682  A--SVGVTMLTKFLTDVIDDYGEYRNSSCGIGPL-AFVASVQSLEQI-PQTLSSSGRFDF 737
               +V    L   L+D++ ++         +G L A +A+ QS   + P  +S+ G   F
Sbjct: 663  GPEAVQSQRLAHALSDMMKEF-------ISMGSLVAVIATSQSQHSLHPWLVSAQGIHIF 715

Query: 738  H-VQLAAPATSERGAILKHEIQKRLLDCSEDILLNL-----AAKCEGYDAYDLEILVDRA 791
              VQ   P   E+   + H + K  LDC  +   NL     A + EG+ A D  +LVDRA
Sbjct: 716  QCVQHIQPPNQEQRCEILHNVIKNKLDCDINRFTNLDLKRIAKETEGFVARDFTVLVDRA 775

Query: 792  VHAAIGRHLPLESNISKYNLVKE--DFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGV 849
            +H+    HL  +   ++  LV    DF +A+  F+P ++R++         LGW+ +GG+
Sbjct: 776  IHS----HLSHQRITTREELVLTTLDFQKALQGFIPASLRNVNLHKPRD--LGWDKIGGL 829

Query: 850  TDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISV 909
             +++  + + I+LP+K+P++FA  P+R R  VLLYGPPG GKT + G  A    + FISV
Sbjct: 830  HEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISV 889

Query: 910  KGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFL 969
            KGPELL+KYIGASEQAVRDIF +A AA PCILFFDEF+SIAP+RGHDNTGVTDRVVNQ L
Sbjct: 890  KGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLL 949

Query: 970  TELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXXXXXXXCDFPSPPERLEILTVLSRKLL 1029
            T+LDGVE L GV+V AATS                    C  P    RLEIL VLS  L 
Sbjct: 950  TQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLP 1009

Query: 1030 MADDIDLEPIALMTEGFSG 1048
            +ADD+DL+ +A +T  F+G
Sbjct: 1010 LADDVDLQHVASVTNSFTG 1028

 Score = 57.0 bits (136), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 10/163 (6%)

Query: 27  DCFVSLPRQLLHAXXXXXXXXXXXXXXVELRSGDRRWSVAWXX----XXXXXXAIEIARV 82
           DCF+ LPR+L+                +E+  G +   ++W              EI R 
Sbjct: 26  DCFLRLPRRLV------AQLHLLQNQAIEVAWGHQPAFLSWVEGRHFSDQGENVAEINRH 79

Query: 83  FAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVRILHE 142
             + + L +G  V +++  +V     V VEP + DDW                Q+RI+  
Sbjct: 80  VGQKLGLSNGDQVFLKLCSHVVSCQQVEVEPLSADDWEILELHAASLEQHLLDQIRIVFP 139

Query: 143 TMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
              FP+W+  +T I   +V+  P+    +L   T++ + PK R
Sbjct: 140 KAIFPVWVDQQTYIFIQIVALMPTAAYGRLETDTKLLILPKTR 182
>gi|157822837|ref|NP_001102690.1| hypothetical protein LOC500006 [Rattus norvegicus]
 gi|149029073|gb|EDL84367.1| similar to peroxisome biogenesis factor 1 (predicted) [Rattus
            norvegicus]
          Length = 1283

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 186/466 (39%), Positives = 261/466 (56%), Gaps = 25/466 (5%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAE 653
            G +LI G  GSGK+ LA+A  K  E    L AHV +V C  L  ++++ I   L    +E
Sbjct: 593  GALLITGGKGSGKSTLAKAICK--EAHDALDAHVEMVDCKALRGKRLESIQKALEVAFSE 650

Query: 654  GLEHAPSVXXXXXXXXXXXXXXXTEGTQA--SVGVTMLTKFLTDVIDDYGEYRNSSCGIG 711
                 PSV                E   +  +V    L   L ++I ++         +G
Sbjct: 651  AAWRQPSVILLDDLDLIAGLPSTPEHEHSPEAVQSQRLAHALNNMIKEF-------VSMG 703

Query: 712  PL-AFVASVQSLEQI-PQTLSSSGRFDFH-VQLAAPATSERGAILKHEIQKRLLDC---- 764
             L A +A+ Q    + P  +S+ G   F  +Q   P   E+   + H + K  L C    
Sbjct: 704  SLVALIATSQLQHSLHPSLVSAQGVHTFQCIQHIQPPDQEQRCEILHSVVKNKLGCDISK 763

Query: 765  SEDILLNLAAK-CEGYDAYDLEILVDRAVHAAIGRHL-PLESNISKYNLVKEDFTRAMHD 822
            S D+ L   AK  E + A D  +LVDRA+H+++ R   P    ++   L   DF +A+  
Sbjct: 764  SPDLDLKCIAKETEAFVARDFTVLVDRAIHSSLSRQQNPTREGLT---LTTADFQKALRG 820

Query: 823  FVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVL 882
            F+P ++R++         LGW+ +GG+ +++  + + I+LP+K+P++FA  P+R R+ +L
Sbjct: 821  FLPASLRNVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGIL 878

Query: 883  LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILF 942
            LYGPPG GKT + G  A    + FIS++GPELL+KYIGASEQAVRD+F +A AA PCILF
Sbjct: 879  LYGPPGTGKTLLAGVVARESGMNFISIQGPELLSKYIGASEQAVRDVFIRAQAAKPCILF 938

Query: 943  FDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXX 1002
            FDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATS              
Sbjct: 939  FDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGR 998

Query: 1003 XXXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSG 1048
                  C  P    RLEILTVLS+ L +ADD+DL+ +A +TE F+G
Sbjct: 999  LDKCVYCPPPDQVSRLEILTVLSKSLPLADDVDLQHVASVTESFTG 1044

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 68/173 (39%), Gaps = 16/173 (9%)

Query: 27  DCFVSLPRQLLHAXXXXXXXXXXXXXXVELRSGDRR-----WSVAWXXXXXXXXAIEIAR 81
           DCF+ LPR L+                +E+ +GD +     W              EI R
Sbjct: 26  DCFLHLPRHLV------AQLHLLQNQAIEV-TGDHQPTYLSWVEGRHFNDQSENVAEINR 78

Query: 82  VFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVRILH 141
              + + L  G  V +R   +V     V VEP + DDW                Q+RI+ 
Sbjct: 79  QVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILELHAISLEEHLLDQIRIVF 138

Query: 142 ETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRDRNLKAKKS 194
                P+W+  +T I   +V+  P+    +L   T++ + PK R    +AK+S
Sbjct: 139 PKAIVPIWVDQQTYIFIQIVALMPTAPYGRLETNTKLLIQPKTR----QAKES 187
>gi|66804599|ref|XP_636032.1| peroxisomal biogenesis factor 1 [Dictyostelium discoideum AX4]
 gi|60464386|gb|EAL62534.1| peroxisomal biogenesis factor 1 [Dictyostelium discoideum AX4]
          Length = 1227

 Score =  303 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 177/505 (35%), Positives = 271/505 (53%), Gaps = 33/505 (6%)

Query: 587  KFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHV 646
            +   P    ++I G  GSGK++LA +   Y+       A +I + C+ L   KV++I   
Sbjct: 596  QLNTPGVNGMIIAGSHGSGKSLLATSLGGYYSTDSRSNAFIIKLDCNQLKELKVENIRKQ 655

Query: 647  LSSVIAEGLEHAPSVXXXXXXXXXXXXXXX-----------TEGTQASVGVTMLTKFLTD 695
             + +  +  + + +                           T   Q         + ++ 
Sbjct: 656  FNKLFYKSCKESGNTLSATTSTNTTPPPIIIILESLDLILGTPNDQDPGSKIRCEQLVSH 715

Query: 696  VIDDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKH 755
            +     +Y+N S    P+  +A+V S + + Q++     F   ++L AP   ER  IL+ 
Sbjct: 716  IKSLCFKYQNRS---SPIVMIATVISSQSLCQSIQIPELFGLTIELQAPTREERVEILER 772

Query: 756  EIQ---KRLLDCSEDILLNLAAKCEGYDAYDLEILVDRAVHAAIGRHLPLESN------- 805
             ++   K+L D     L+  +A  EGY   D+E +VDR++H +  + +   +N       
Sbjct: 773  YLKYQGKQLKDQQSLNLMKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNNDDNDD 832

Query: 806  --ISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELP 863
              I ++++++    +A   + P+ ++ I   +SE   + W+D+GG+  ++  +KE IE P
Sbjct: 833  DNIIEFSIIE----KAKEGYTPITLKGIKLHSSE---IKWQDIGGLDSVRAMLKETIEWP 885

Query: 864  SKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASE 923
            +K+PK+F  SPLRLRS +LLYGP GCGKT +  A A  C L FISVKGPELLNKYIG+SE
Sbjct: 886  TKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSE 945

Query: 924  QAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFV 983
            Q VRD+FS+A++A PC+LFFDEFDSIAP+RGHDN+GVTDRVVNQFLT+LDGVE LTGV+V
Sbjct: 946  QGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTGVYV 1005

Query: 984  FAATSXXXXXXXXXXXXXXXXXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMT 1043
             AATS                    C+ P   ERL+ILT L  K+ ++  I LE ++  T
Sbjct: 1006 LAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTNT 1065

Query: 1044 EGFSGXXXXXXXXXXXXXXVHEYLN 1068
            + ++G              +HE++N
Sbjct: 1066 QYYTGADLRALMYNAQLKSIHEWMN 1090

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 13/172 (7%)

Query: 27  DCFVSLPRQLLHAXXXXXXXXXXXXXXV--------ELRSGDRRWSVAWXXXXXX---XX 75
           DCFVSLP +++H+              +        ++   + +  V W           
Sbjct: 12  DCFVSLPPKIVHSLLLLSEKQSKSLGTLGLEITWYDKINKKENKGYVGWAGGSTDPRFTD 71

Query: 76  AIEIARVFAESIS-LPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXX 134
           +IE+++  A+ +  + +   +K++ L N+  A  V VEP T DDW               
Sbjct: 72  SIEMSQEMAQCLGGIKNEQKLKLKALNNIELAHSVQVEPLTSDDWEIMEVHQQYLEEQLL 131

Query: 135 SQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRD 186
           +QV IL+     P+W+H +T+I+  V  T P+  VV+L   +E+ VAPK R+
Sbjct: 132 NQVNILYSGQIVPIWIHHKTIIKLKVTETLPTP-VVKLSSNSEIIVAPKPRN 182
>gi|169847347|ref|XP_001830385.1| hypothetical protein CC1G_02021 [Coprinopsis cinerea okayama7#130]
 gi|116508637|gb|EAU91532.1| hypothetical protein CC1G_02021 [Coprinopsis cinerea okayama7#130]
          Length = 1025

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 199/550 (36%), Positives = 283/550 (51%), Gaps = 36/550 (6%)

Query: 593  PGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIA 652
            PG +L+ G PGSGK+ + R+ A+  ++ ++ LA    V  S  A   + ++  + +    
Sbjct: 427  PG-LLVTGLPGSGKSSIVRSVARSLQQNRETLAFTYYVDVSRYAESPIANVKALFTYWFD 485

Query: 653  EGLEHAPSVXXXXXXXXXXXXXXXTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCG--I 710
                H P V                 G +     +  ++ LT+V       R  S G  +
Sbjct: 486  RVSWHRPGVLVLDNLDKLL-------GAEVEHADSFRSRLLTEVF-----LRTFSSGSRL 533

Query: 711  GPL-----AFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDCS 765
             PL       +A+  S+  +   L+SS  F   V +  P    R  I+   +  RL + +
Sbjct: 534  APLNAKGIVVIATASSVAGLHPRLNSSHIFKEVVNVKPPNRDARRDIISRIVNDRL-EAT 592

Query: 766  EDILLN-------LAAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKY-NLVKEDFT 817
            +DI  N       LA + EGY A DL+ LV RA+H    R   + S+ S +  L  EDFT
Sbjct: 593  QDITANPNLNFTALATQTEGYSASDLQDLVARAIHQVAMR---ISSDPSAHGELSYEDFT 649

Query: 818  RAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRL 877
            +A  +FVP+ +RD+    S      W D+GG+ + K  ++E +E P+K+  IF++SPLRL
Sbjct: 650  KAQAEFVPLTLRDVKLEKSS---TSWSDIGGLFETKRVLRETLEWPTKYGPIFSQSPLRL 706

Query: 878  RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAA 937
            RS +LLYG PGCGKT +  A A  C L FISVKGPE+LNKYIGASE++VRD+F +A+AA 
Sbjct: 707  RSGLLLYGYPGCGKTLLASAVAKECGLNFISVKGPEILNKYIGASEKSVRDLFERASAAK 766

Query: 938  PCILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXX 997
            PC+LFFDEFDSIAPKRGHD+TGVTDRVVNQ LT++DG E L GV+V AATS         
Sbjct: 767  PCVLFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYVLAATSRPDLIDSAL 826

Query: 998  XXXXXXXXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGXXXXXXXXX 1057
                       CD P   +R +IL  +++KL  +  I+L+ IA MTEG+SG         
Sbjct: 827  LRPGRLDKSVLCDMPDLDDRKDILRAVAKKLTFSASINLDRIAEMTEGYSGADLQALLYN 886

Query: 1058 XXXXXVHEYLNREDKPETGTTPIITDPLLKSI-ASKTKPSVSETEKQKLYDIYSQFLDSR 1116
                 +H  L+     +T +         + I  S  K ++S  E         Q   SR
Sbjct: 887  AHLDAIHASLDTSPISQTSSQETEIPIKYQVIGGSGDKATMSRAETSAFERRLKQIQSSR 946

Query: 1117 KSSREAKGKR 1126
                +  GK+
Sbjct: 947  ACRSKTAGKK 956

 Score = 58.5 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 2/119 (1%)

Query: 77  IEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQ 136
           IEI   FA+ +    G VV++ +L ++  A +V  EP T DDW               SQ
Sbjct: 86  IEIDPQFAQGLGFMQGDVVEIGLLHDLSIAQMVNTEPVTSDDWEIIEIHASHVESTLLSQ 145

Query: 137 VRILHETMKFPLWLHDRTVIRFSVVSTFP-SKG-VVQLVPGTEVAVAPKRRDRNLKAKK 193
           VR+     +  +W+  RT +R +V    P +KG  + L   TEV++APK       AKK
Sbjct: 146 VRVAKIGQEINVWVLGRTRVRLTVTGLEPQNKGNALLLTTNTEVSIAPKLHKSQSPAKK 204
>gi|109067524|ref|XP_001101055.1| PREDICTED: similar to peroxin1 isoform 2 [Macaca mulatta]
          Length = 1278

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 188/468 (40%), Positives = 261/468 (55%), Gaps = 29/468 (6%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAE 653
            G +L+ G  GSGK+ LA+A  K  E    L AHV  V C  L  +++++I   L    +E
Sbjct: 591  GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 648

Query: 654  GLEHAPSVXXXXXXXXXXXXXXXTEGTQA--SVGVTMLTKFLTDVIDDYGEYRNSSCGIG 711
             +   PSV                E   +  +     L   L D+I ++         +G
Sbjct: 649  AVWMQPSVVLLDDLDHIAGPPAVPEHEHSPDAAQSQRLAHALNDMIKEF-------ISMG 701

Query: 712  PL-AFVASVQSLEQI-PQTLSSSGRFDF----HVQLAAPATSERGAILKHEIQKRLLDCS 765
             L A +A+ QS + + P  +S+ G   F    H+Q   P   +R  IL + I+ +L DC 
Sbjct: 702  SLVALIATSQSQQSLHPLLVSAQGVHIFQCIQHIQ--PPNQEQRCEILCNVIKNKL-DCD 758

Query: 766  EDILLNL-----AAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAM 820
             +   +L     A +  G+ A D  +LVDRA+H+ + R     S   K  L   DF +A+
Sbjct: 759  INKFTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSRQSI--STREKLVLTTLDFQKAL 816

Query: 821  HDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSN 880
            H F+P ++R +         LGW+ +GG+ +++  + + I+LP+K+P++FA  P+R R+ 
Sbjct: 817  HGFIPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTG 874

Query: 881  VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCI 940
            +LLYGPPG GKT + G  A    + FISVKGPELL+KYIGASEQAVRDIF +A AA PCI
Sbjct: 875  ILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCI 934

Query: 941  LFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXX 1000
            LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATS            
Sbjct: 935  LFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP 994

Query: 1001 XXXXXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSG 1048
                    C  P    RLEIL  LS  L +ADD+DL+ +A +T+ F+G
Sbjct: 995  GRLDKCVYCPPPDQVSRLEILNALSDSLPLADDVDLQHVASVTDSFTG 1042

 Score = 52.0 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 60/162 (37%), Gaps = 8/162 (4%)

Query: 27  DCFVSLPRQL---LHAXXXXXXXXXXXXXXVELRSGDRRWSVAWXXXXXXXXAIEIARVF 83
           DCF+ LPR L   LH                 L      W              EI R  
Sbjct: 26  DCFLHLPRGLVAQLHLLQNQAIEVVWSQQPAFLS-----WVEGRHFSDQGENVAEINRQV 80

Query: 84  AESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVRILHET 143
            + + L +G  V ++   +V     V VEP + DDW                Q+RI+   
Sbjct: 81  GQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPK 140

Query: 144 MKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
             FP+W+  +T I   +V+  P+    +L   T++ + PK R
Sbjct: 141 AIFPVWVDQQTYIFIQIVALIPTASYGRLETDTKLLIQPKTR 182
>gi|119597250|gb|EAW76844.1| peroxisome biogenesis factor 1, isoform CRA_e [Homo sapiens]
          Length = 1284

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 187/465 (40%), Positives = 258/465 (55%), Gaps = 23/465 (4%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAE 653
            G +L+ G  GSGK+ LA+A  K  E    L AHV  V C  L  +++++I   L    +E
Sbjct: 593  GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 650

Query: 654  GLEHAPSVXXXXXXXXXXXXXXXTEGTQA--SVGVTMLTKFLTDVIDDYGEYRNSSCGIG 711
             +   PSV                E   +  +V    L   L D+I ++         +G
Sbjct: 651  AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEF-------ISMG 703

Query: 712  PL-AFVASVQSLEQI-PQTLSSSGRFDFH-VQLAAPATSERGAILKHEIQKRLLDCSEDI 768
             L A +A+ QS + + P  +S+ G   F  VQ   P   E+   +   + K  LDC  + 
Sbjct: 704  SLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINK 763

Query: 769  LLNL-----AAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDF 823
              +L     A +  G+ A D  +LVDRA+H+ + R     S   K  L   DF +A+  F
Sbjct: 764  FTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSRQSI--STREKLVLTTLDFQKALRGF 821

Query: 824  VPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLL 883
            +P ++R +         LGW+ +GG+ +++  + + I+LP+K+P++FA  P+R R+ +LL
Sbjct: 822  LPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILL 879

Query: 884  YGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFF 943
            YGPPG GKT + G  A    + FISVKGPELL+KYIGASEQAVRDIF +A AA PCILFF
Sbjct: 880  YGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFF 939

Query: 944  DEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXX 1003
            DEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATS               
Sbjct: 940  DEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRL 999

Query: 1004 XXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSG 1048
                 C  P    RLEIL VLS  L +ADD+DL+ +A +T+ F+G
Sbjct: 1000 DKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTG 1044

 Score = 52.8 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 8/162 (4%)

Query: 27  DCFVSLPRQL---LHAXXXXXXXXXXXXXXVELRSGDRRWSVAWXXXXXXXXAIEIARVF 83
           DCF+ LPR+L   LH                 L      W              EI R  
Sbjct: 26  DCFLHLPRRLVAQLHLLQNQAIEVVWSHQPAFLS-----WVEGRHFSDQGENVAEINRQV 80

Query: 84  AESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVRILHET 143
            + + L +G  V ++   +V     V VEP + DDW                Q+RI+   
Sbjct: 81  GQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPK 140

Query: 144 MKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
             FP+W+  +T I   +V+  P+    +L   T++ + PK R
Sbjct: 141 AIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTR 182
>gi|126341344|ref|XP_001368801.1| PREDICTED: similar to peroxisome biogenesis disorder protein 1
            isoform 2 [Monodelphis domestica]
          Length = 1250

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 190/467 (40%), Positives = 259/467 (55%), Gaps = 27/467 (5%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAE 653
            G ILI G  GSGK+ LA+A  K  E    L AHV ++ C  L  ++ +++   L    +E
Sbjct: 560  GAILISGAKGSGKSTLAKAVCK--EASDKLDAHVEVMDCKALRGKRPENVQRALELAFSE 617

Query: 654  GLEHAPSVXXXXXXXXXXXXXXXTEGTQA--SVGVTMLTKFLTDVIDDYGEYRNSSCGIG 711
             +   PSV                E      +V    L   L D+I +         G+G
Sbjct: 618  AVWKQPSVVLLDDLDHIIGVSSMPELEHGPNAVQSQRLAYALKDMIKEI-------IGMG 670

Query: 712  PL-AFVASVQSLEQI-PQTLSSSGRFDFH--VQLAAPATSERGAILKHEIQKRLLDCSED 767
             L A VA+ Q+   + P  +S+ G   F     + AP   +R  IL H + K  L+ + D
Sbjct: 671  SLIALVATSQTHHSLHPLLVSAQGVHIFQNFQYINAPDQEQRQEIL-HCVIKNKLNHNVD 729

Query: 768  ILLNLAAKC-----EGYDAYDLEILVDRAVHAAIG-RHLPLESNISKYNLVKEDFTRAMH 821
               +L  +C     EG+ A D  +LVDRAVHA I  R++  E  +    L   DF +A+ 
Sbjct: 730  KFTDLDLRCIAKETEGFVARDFTMLVDRAVHACISSRNVCTEEGLHLKTL---DFQKALK 786

Query: 822  DFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNV 881
             F P ++R++     +   +GW+ +GG+ +++  + + I+LP+K+P +F+  P+R R+ +
Sbjct: 787  GFTPTSLRNVNLHKPKD--VGWDKIGGLHEVRQILMDTIQLPAKYPDLFSNLPIRQRTGI 844

Query: 882  LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCIL 941
            LLYGPPG GKT I G  A    + FIS+KGPELL+KYIGASEQAVRDIF +A AA PCIL
Sbjct: 845  LLYGPPGTGKTLIAGVIARESGMNFISIKGPELLSKYIGASEQAVRDIFFRAQAAKPCIL 904

Query: 942  FFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXX 1001
            FFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATS             
Sbjct: 905  FFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLEGVYVLAATSRPDLIDPALLRPG 964

Query: 1002 XXXXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSG 1048
                   C  P    RLEIL VLS  L + DD+DLE +A +T  F+G
Sbjct: 965  RLDKCVYCPPPDEVSRLEILKVLSDSLPLTDDVDLEHLASVTSSFTG 1011

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 10/174 (5%)

Query: 16  TEAVVNTVAGVDCFVSLPRQLLHAXXXXXXXXXXXXXXVELRSGDRRWSVAWX----XXX 71
           T   V+     DCF+ LPR L                 +E+  G +   ++W        
Sbjct: 16  TAVTVSFSHARDCFLHLPRAL------AAQLHLQQNQAIEVSWGHQPIFLSWVEGKHQTN 69

Query: 72  XXXXAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXX 131
                 EI R F + + + DG  V +R   +V     V V+P T DDW            
Sbjct: 70  QGENVAEINRQFGQKLGISDGEQVFLRPCSHVVSCHQVEVKPLTADDWEILELHAASLEQ 129

Query: 132 XXXSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
               Q+RI+     FP+W+  +T I   +V   P+    +L   TE+ V  K R
Sbjct: 130 HLLDQIRIVFPDAIFPVWVDQQTYIYIQIVVLMPAASYGRLENDTELFVHSKPR 183
>gi|4505725|ref|NP_000457.1| peroxin1 [Homo sapiens]
 gi|8134613|sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome biogenesis
            disorder protein 1)
 gi|2655141|gb|AAB87880.1| peroxisome biogenesis disorder protein 1 [Homo sapiens]
 gi|2827156|gb|AAB99758.1| peroxisome biogenesis gene 1 [Homo sapiens]
 gi|6015438|dbj|BAA85162.1| PEX1 [Homo sapiens]
 gi|23242696|gb|AAH35575.1| Peroxisome biogenesis factor 1 [Homo sapiens]
 gi|51094904|gb|EAL24149.1| peroxisome biogenesis factor 1 [Homo sapiens]
 gi|119597246|gb|EAW76840.1| peroxisome biogenesis factor 1, isoform CRA_a [Homo sapiens]
 gi|123980036|gb|ABM81847.1| peroxisome biogenesis factor 1 [synthetic construct]
          Length = 1283

 Score =  298 bits (763), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 187/465 (40%), Positives = 258/465 (55%), Gaps = 23/465 (4%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAE 653
            G +L+ G  GSGK+ LA+A  K  E    L AHV  V C  L  +++++I   L    +E
Sbjct: 593  GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 650

Query: 654  GLEHAPSVXXXXXXXXXXXXXXXTEGTQA--SVGVTMLTKFLTDVIDDYGEYRNSSCGIG 711
             +   PSV                E   +  +V    L   L D+I ++         +G
Sbjct: 651  AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEF-------ISMG 703

Query: 712  PL-AFVASVQSLEQI-PQTLSSSGRFDFH-VQLAAPATSERGAILKHEIQKRLLDCSEDI 768
             L A +A+ QS + + P  +S+ G   F  VQ   P   E+   +   + K  LDC  + 
Sbjct: 704  SLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINK 763

Query: 769  LLNL-----AAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDF 823
              +L     A +  G+ A D  +LVDRA+H+ + R     S   K  L   DF +A+  F
Sbjct: 764  FTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSRQSI--STREKLVLTTLDFQKALRGF 821

Query: 824  VPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLL 883
            +P ++R +         LGW+ +GG+ +++  + + I+LP+K+P++FA  P+R R+ +LL
Sbjct: 822  LPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILL 879

Query: 884  YGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFF 943
            YGPPG GKT + G  A    + FISVKGPELL+KYIGASEQAVRDIF +A AA PCILFF
Sbjct: 880  YGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFF 939

Query: 944  DEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXX 1003
            DEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATS               
Sbjct: 940  DEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRL 999

Query: 1004 XXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSG 1048
                 C  P    RLEIL VLS  L +ADD+DL+ +A +T+ F+G
Sbjct: 1000 DKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTG 1044

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 8/162 (4%)

Query: 27  DCFVSLPRQL---LHAXXXXXXXXXXXXXXVELRSGDRRWSVAWXXXXXXXXAIEIARVF 83
           DCF+ LPR+L   LH                 L      W              EI R  
Sbjct: 26  DCFLHLPRRLVAQLHLLQNQAIEVVWSHQPAFLS-----WVEGRHFSDQGENVAEINRQV 80

Query: 84  AESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVRILHET 143
            + + L +G  V ++   +V     V VEP + DDW                Q+RI+   
Sbjct: 81  GQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPK 140

Query: 144 MKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
             FP+W+  +T I   +V+  P+    +L   T++ + PK R
Sbjct: 141 AIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTR 182
>gi|14289173|dbj|BAB59062.1| Pex1pL664P [Homo sapiens]
          Length = 1283

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 187/465 (40%), Positives = 258/465 (55%), Gaps = 23/465 (4%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAE 653
            G +L+ G  GSGK+ LA+A  K  E    L AHV  V C  L  +++++I   L    +E
Sbjct: 593  GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 650

Query: 654  GLEHAPSVXXXXXXXXXXXXXXXTEGTQA--SVGVTMLTKFLTDVIDDYGEYRNSSCGIG 711
             +   PSV                E   +  +V    L   L D+I ++         +G
Sbjct: 651  AVWMQPSVVLLDDPDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEF-------ISMG 703

Query: 712  PL-AFVASVQSLEQI-PQTLSSSGRFDFH-VQLAAPATSERGAILKHEIQKRLLDCSEDI 768
             L A +A+ QS + + P  +S+ G   F  VQ   P   E+   +   + K  LDC  + 
Sbjct: 704  SLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINK 763

Query: 769  LLNL-----AAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDF 823
              +L     A +  G+ A D  +LVDRA+H+ + R     S   K  L   DF +A+  F
Sbjct: 764  FTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSRQSI--STREKLVLTTLDFQKALRGF 821

Query: 824  VPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLL 883
            +P ++R +         LGW+ +GG+ +++  + + I+LP+K+P++FA  P+R R+ +LL
Sbjct: 822  LPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILL 879

Query: 884  YGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFF 943
            YGPPG GKT + G  A    + FISVKGPELL+KYIGASEQAVRDIF +A AA PCILFF
Sbjct: 880  YGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFF 939

Query: 944  DEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXX 1003
            DEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATS               
Sbjct: 940  DEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRL 999

Query: 1004 XXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSG 1048
                 C  P    RLEIL VLS  L +ADD+DL+ +A +T+ F+G
Sbjct: 1000 DKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTG 1044

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 8/162 (4%)

Query: 27  DCFVSLPRQL---LHAXXXXXXXXXXXXXXVELRSGDRRWSVAWXXXXXXXXAIEIARVF 83
           DCF+ LPR+L   LH                 L      W              EI R  
Sbjct: 26  DCFLHLPRRLVAQLHLLQNQAIEVVWSHQPAFLS-----WVEGRHFSDQGENVAEINRQV 80

Query: 84  AESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVRILHET 143
            + + L +G  V ++   +V     V VEP + DDW                Q+RI+   
Sbjct: 81  GQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPK 140

Query: 144 MKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
             FP+W+  +T I   +V+  P+    +L   T++ + PK R
Sbjct: 141 AIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTR 182
>gi|126341342|ref|XP_001368768.1| PREDICTED: similar to peroxisome biogenesis disorder protein 1
            isoform 1 [Monodelphis domestica]
          Length = 1290

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 190/467 (40%), Positives = 259/467 (55%), Gaps = 27/467 (5%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAE 653
            G ILI G  GSGK+ LA+A  K  E    L AHV ++ C  L  ++ +++   L    +E
Sbjct: 600  GAILISGAKGSGKSTLAKAVCK--EASDKLDAHVEVMDCKALRGKRPENVQRALELAFSE 657

Query: 654  GLEHAPSVXXXXXXXXXXXXXXXTEGTQA--SVGVTMLTKFLTDVIDDYGEYRNSSCGIG 711
             +   PSV                E      +V    L   L D+I +         G+G
Sbjct: 658  AVWKQPSVVLLDDLDHIIGVSSMPELEHGPNAVQSQRLAYALKDMIKEI-------IGMG 710

Query: 712  PL-AFVASVQSLEQI-PQTLSSSGRFDFH--VQLAAPATSERGAILKHEIQKRLLDCSED 767
             L A VA+ Q+   + P  +S+ G   F     + AP   +R  IL H + K  L+ + D
Sbjct: 711  SLIALVATSQTHHSLHPLLVSAQGVHIFQNFQYINAPDQEQRQEIL-HCVIKNKLNHNVD 769

Query: 768  ILLNLAAKC-----EGYDAYDLEILVDRAVHAAIG-RHLPLESNISKYNLVKEDFTRAMH 821
               +L  +C     EG+ A D  +LVDRAVHA I  R++  E  +    L   DF +A+ 
Sbjct: 770  KFTDLDLRCIAKETEGFVARDFTMLVDRAVHACISSRNVCTEEGLHLKTL---DFQKALK 826

Query: 822  DFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNV 881
             F P ++R++     +   +GW+ +GG+ +++  + + I+LP+K+P +F+  P+R R+ +
Sbjct: 827  GFTPTSLRNVNLHKPKD--VGWDKIGGLHEVRQILMDTIQLPAKYPDLFSNLPIRQRTGI 884

Query: 882  LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCIL 941
            LLYGPPG GKT I G  A    + FIS+KGPELL+KYIGASEQAVRDIF +A AA PCIL
Sbjct: 885  LLYGPPGTGKTLIAGVIARESGMNFISIKGPELLSKYIGASEQAVRDIFFRAQAAKPCIL 944

Query: 942  FFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXX 1001
            FFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATS             
Sbjct: 945  FFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLEGVYVLAATSRPDLIDPALLRPG 1004

Query: 1002 XXXXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSG 1048
                   C  P    RLEIL VLS  L + DD+DLE +A +T  F+G
Sbjct: 1005 RLDKCVYCPPPDEVSRLEILKVLSDSLPLTDDVDLEHLASVTSSFTG 1051

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 10/174 (5%)

Query: 16  TEAVVNTVAGVDCFVSLPRQLLHAXXXXXXXXXXXXXXVELRSGDRRWSVAWX----XXX 71
           T   V+     DCF+ LPR L                 +E+  G +   ++W        
Sbjct: 16  TAVTVSFSHARDCFLHLPRAL------AAQLHLQQNQAIEVSWGHQPIFLSWVEGKHQTN 69

Query: 72  XXXXAIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXX 131
                 EI R F + + + DG  V +R   +V     V V+P T DDW            
Sbjct: 70  QGENVAEINRQFGQKLGISDGEQVFLRPCSHVVSCHQVEVKPLTADDWEILELHAASLEQ 129

Query: 132 XXXSQVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
               Q+RI+     FP+W+  +T I   +V   P+    +L   TE+ V  K R
Sbjct: 130 HLLDQIRIVFPDAIFPVWVDQQTYIYIQIVVLMPAASYGRLENDTELFVHSKPR 183
>gi|114614480|ref|XP_519198.2| PREDICTED: peroxin1 isoform 2 [Pan troglodytes]
          Length = 1283

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 187/465 (40%), Positives = 258/465 (55%), Gaps = 23/465 (4%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAE 653
            G +L+ G  GSGK+ LA+A  K  E    L AHV  V C  L  +++++I   L    +E
Sbjct: 593  GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 650

Query: 654  GLEHAPSVXXXXXXXXXXXXXXXTEGTQA--SVGVTMLTKFLTDVIDDYGEYRNSSCGIG 711
             +   PSV                E   +  +V    L   L D+I ++         +G
Sbjct: 651  AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEF-------ISMG 703

Query: 712  PL-AFVASVQSLEQI-PQTLSSSGRFDFH-VQLAAPATSERGAILKHEIQKRLLDCSEDI 768
             L A +A+ QS + + P  +S+ G   F  VQ   P   E+   +   + K  LDC  + 
Sbjct: 704  SLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINK 763

Query: 769  LLNL-----AAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDF 823
              +L     A +  G+ A D  +LVDRA+H+ + R     S   K  L   DF +A+  F
Sbjct: 764  FTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSRQSI--STREKLVLTTLDFQKALRGF 821

Query: 824  VPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLL 883
            +P ++R +         LGW+ +GG+ +++  + + I+LP+K+P++FA  P+R R+ +LL
Sbjct: 822  LPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILL 879

Query: 884  YGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFF 943
            YGPPG GKT + G  A    + FISVKGPELL+KYIGASEQAVRDIF +A AA PCILFF
Sbjct: 880  YGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFF 939

Query: 944  DEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXX 1003
            DEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATS               
Sbjct: 940  DEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRL 999

Query: 1004 XXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSG 1048
                 C  P    RLEIL VLS  L +ADD+DL+ +A +T+ F+G
Sbjct: 1000 DKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTG 1044

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 8/162 (4%)

Query: 27  DCFVSLPRQL---LHAXXXXXXXXXXXXXXVELRSGDRRWSVAWXXXXXXXXAIEIARVF 83
           DCF+ LPR+L   LH                 L      W              EI R  
Sbjct: 26  DCFLHLPRRLVAQLHLLQNQAIEVVWSHQPAFLS-----WVEGRHFSDQGENVAEINRQV 80

Query: 84  AESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVRILHET 143
            + + L +G  V ++   +V     V VEP + DDW                Q+RI+   
Sbjct: 81  GQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPK 140

Query: 144 MKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
             FP+W+  +T I   +V+  P+    +L   T++ + PK R
Sbjct: 141 AIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTR 182
>gi|158259371|dbj|BAF85644.1| unnamed protein product [Homo sapiens]
          Length = 1283

 Score =  297 bits (760), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 186/465 (40%), Positives = 258/465 (55%), Gaps = 23/465 (4%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAE 653
            G +L+ G  GSGK+ LA+A  K  E    L AHV  V C  L  +++++I   L    +E
Sbjct: 593  GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 650

Query: 654  GLEHAPSVXXXXXXXXXXXXXXXTEGTQA--SVGVTMLTKFLTDVIDDYGEYRNSSCGIG 711
             +   PSV                E   +  +V    L   L D++ ++         +G
Sbjct: 651  AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMMKEF-------ISMG 703

Query: 712  PL-AFVASVQSLEQI-PQTLSSSGRFDFH-VQLAAPATSERGAILKHEIQKRLLDCSEDI 768
             L A +A+ QS + + P  +S+ G   F  VQ   P   E+   +   + K  LDC  + 
Sbjct: 704  SLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINK 763

Query: 769  LLNL-----AAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDF 823
              +L     A +  G+ A D  +LVDRA+H+ + R     S   K  L   DF +A+  F
Sbjct: 764  FTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSRQSI--STREKLVLTTLDFQKALRGF 821

Query: 824  VPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLL 883
            +P ++R +         LGW+ +GG+ +++  + + I+LP+K+P++FA  P+R R+ +LL
Sbjct: 822  LPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILL 879

Query: 884  YGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFF 943
            YGPPG GKT + G  A    + FISVKGPELL+KYIGASEQAVRDIF +A AA PCILFF
Sbjct: 880  YGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFF 939

Query: 944  DEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXXX 1003
            DEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATS               
Sbjct: 940  DEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRL 999

Query: 1004 XXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSG 1048
                 C  P    RLEIL VLS  L +ADD+DL+ +A +T+ F+G
Sbjct: 1000 DKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTG 1044

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 8/162 (4%)

Query: 27  DCFVSLPRQL---LHAXXXXXXXXXXXXXXVELRSGDRRWSVAWXXXXXXXXAIEIARVF 83
           DCF+ LPR+L   LH                 L      W              EI R  
Sbjct: 26  DCFLHLPRRLVAQLHLLQNQAIEVVWSHQPAFLS-----WVEGRHFSDQGENVAEINRQV 80

Query: 84  AESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVRILHET 143
            + + L +G  V ++   +V     V VEP + DDW                Q+RI+   
Sbjct: 81  GQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEILELHAVSLEQHLLDQIRIVFPK 140

Query: 144 MKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
             FP+W+  +T I   +V+  P+    +L   T++ + PK R
Sbjct: 141 AIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTR 182
>gi|115676917|ref|XP_797089.2| PREDICTED: similar to peroxisome biogenesis disorder protein 1
            [Strongylocentrotus purpuratus]
 gi|115925913|ref|XP_001181846.1| PREDICTED: similar to peroxisome biogenesis disorder protein 1
            [Strongylocentrotus purpuratus]
          Length = 1508

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 193/503 (38%), Positives = 274/503 (54%), Gaps = 24/503 (4%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAE 653
            G +LI G  GSGKT +A+A  +   E   LLA+V +V C  L  + V  I  +      E
Sbjct: 747  GGVLICGGRGSGKTTVAKAVCQEASEWP-LLAYVKVVECHALKGKGVDTIRKIWEEAFDE 805

Query: 654  GLEHAPSVXXXXXXXXXXXXXXXTE---GTQASVGVTMLTKFLTDVIDDYGEYRNSSCGI 710
                 PSV                E   G +A+   + L + L D++ +     N    I
Sbjct: 806  AAWRQPSVILLDDLDHVTSAPLGPEQEMGPEATYN-SRLAQVLKDLVTNE---INEGSRI 861

Query: 711  GPLAFVASVQSLEQIPQTLSSSGRFDFH--VQLAAPATSERGAILKHEIQKRL---LDCS 765
              LA  +S +S+ Q    LSS G   F   ++++  +  +R ++L   I  ++   L   
Sbjct: 862  ALLATCSSKKSIHQ--SLLSSRGLHLFQSCLEISPLSKPDRASLLSSVIHSKVEINLQTL 919

Query: 766  EDILLNL-AAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYN--LVKEDFTRAMHD 822
              +  NL +AK +G+ A DL  + +RAVHA   R     S I++ N  +   DF  A+  
Sbjct: 920  TQVDANLLSAKMDGFVASDLVTVTERAVHARSAR----ASFITRKNISMTSYDFEAALQS 975

Query: 823  FVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVL 882
            + P A+RD+   ++  G LGWEDVGG+  +K  + E ++LP+K+P++FA  PLRLRS +L
Sbjct: 976  YSPAALRDVPLHSA--GELGWEDVGGLNGVKQDLVETLQLPAKYPELFASCPLRLRSGLL 1033

Query: 883  LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILF 942
            LYGPPG GKT + G  A  C L FIS+KGPELL+KYIGASEQ+VRD+F++A +A PCILF
Sbjct: 1034 LYGPPGTGKTLLGGVVAKECGLNFISIKGPELLSKYIGASEQSVRDLFTRAMSAKPCILF 1093

Query: 943  FDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXX 1002
            FDEFDS+AP+RGHD+TGVTDRVVNQ LT+LDGVE L GV+V  ATS              
Sbjct: 1094 FDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLEGVYVIGATSRPDLIDPALLRPGR 1153

Query: 1003 XXXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGXXXXXXXXXXXXXX 1062
                  C  P+  ER+EIL  L+RK+ +  ++DL  IA   + F+G              
Sbjct: 1154 LDKCLFCPIPTAEERVEILQALARKMTLRSNVDLAAIAKKLDHFTGADLKALLYNAQLEA 1213

Query: 1063 VHEYLNREDKPETGTTPIITDPL 1085
            +H  L + D+ ++     +T  L
Sbjct: 1214 IHSTLMQSDRRDSNLGLPLTSSL 1236

 Score = 49.3 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 1/110 (0%)

Query: 76  AIEIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXS 135
           +I+I  +    + L  G  V ++ + +V     VTVEP + DDW                
Sbjct: 69  SIQINGLLGNKLGLRHGQEVLMKQVTSVWSCYKVTVEPASVDDWEILELNSSYIETRLLD 128

Query: 136 QVRILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
           QVR++      P+W+ D+  I   + ST P    V+L   TE+ + PK R
Sbjct: 129 QVRVVWSGQVIPVWI-DKMCIFIKIASTEPEAPCVRLEQNTEMIITPKNR 177
>gi|149705938|ref|XP_001493415.1| PREDICTED: similar to Pex1pL664P [Equus caballus]
          Length = 1250

 Score =  296 bits (757), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 209/556 (37%), Positives = 305/556 (54%), Gaps = 47/556 (8%)

Query: 511  LSLDRSEKSDNVVHIEPVLEKMNLGEPIYLKSAKETHCNKGV-SPDISSLTWMG-PIVSD 568
            LS +  +K+   V ++P++++ N  E  ++    + +C  GV S  +SSL  +   ++  
Sbjct: 485  LSANLLQKTTIQVLLDPMVKEENSEEIDFILPFLKLNCLGGVNSLGVSSLEHITHSLLGR 544

Query: 569  VIKRMTVLLSPAAGMWFSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLL-AHV 627
             + R   L+S  AG+          G +L+ G  GSGK+ LA+A  K   E  D+L AHV
Sbjct: 545  PLSRQ--LMSLVAGL--------RNGALLLTGGKGSGKSTLAKAICK---EAFDMLDAHV 591

Query: 628  ILVSCSTLALEKVQHIHHVLSSVIAEGLEHAPSVXXXXXXXXXXXXXXXTEGTQA--SVG 685
              V C  L  +++++I   L +  +E     PSV                E   +  +V 
Sbjct: 592  ERVDCKALRGKRLENIRKTLETAFSEAAWRQPSVVLLDDLDLLVGLPALPEHEHSPDTVQ 651

Query: 686  VTMLTKFLTDVIDDYGEYRNSSCGIGPL-AFVASVQSLEQI-PQTLSSSGRFDF----HV 739
               L   L D++ ++         +G L A +A+ QS   + P  +S+ G   F    H+
Sbjct: 652  SQRLAHALNDMMKEF-------ISMGSLVALIATSQSHHSLHPLLVSAQGIHIFQCIQHI 704

Query: 740  QLAAPATSERGAILKHEIQKRLLDCSEDI-------LLNLAAKCEGYDAYDLEILVDRAV 792
            Q   P   +R  IL + I+ +L     DI       L ++A + EG+ A D  +LVDRA+
Sbjct: 705  Q--PPDQEQRYEILYNVIKNKL---DSDINKFTALDLQHIAKETEGFVARDFTVLVDRAI 759

Query: 793  HAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDI 852
            H+ +  H  + S   +  L   DF +A+  FVP ++R++         LGW+ +GG+ ++
Sbjct: 760  HSRLS-HQSI-STREELVLTTLDFQKALQGFVPASLRNVNLHKPRD--LGWDKIGGLHEV 815

Query: 853  KNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGP 912
            +  + + I+LP+K+P++FA  P+R R+ VLLYGPPG GKT + G  A    + FISVKGP
Sbjct: 816  RQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVKGP 875

Query: 913  ELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTEL 972
            ELL+KYIGASE+AVRDIF +A AA PCILFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+L
Sbjct: 876  ELLSKYIGASEKAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQL 935

Query: 973  DGVEVLTGVFVFAATSXXXXXXXXXXXXXXXXXXXXCDFPSPPERLEILTVLSRKLLMAD 1032
            DGVE L GV+V AATS                    C  P    RLEIL VLS  L +AD
Sbjct: 936  DGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLAD 995

Query: 1033 DIDLEPIALMTEGFSG 1048
            D+DL+ +A +T+ F+G
Sbjct: 996  DVDLQHVASVTDSFTG 1011

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 48/108 (44%)

Query: 78  EIARVFAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQV 137
           EI R   + + L +G  V ++   +V     V VEP + DDW                Q+
Sbjct: 42  EINRQVGQKLGLSNGEQVFLKPCSHVVSCQQVEVEPVSADDWEILELHAASLEQHLLDQI 101

Query: 138 RILHETMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRR 185
           RI+     FP+W+  +T +   +V+  P+    +L   T++ V PK R
Sbjct: 102 RIVFPKAVFPVWVDQQTYVFLQIVALIPTATYGRLETDTQLLVQPKTR 149
>gi|118085819|ref|XP_418655.2| PREDICTED: similar to peroxisome biogenesis disorder protein 1
            [Gallus gallus]
          Length = 1290

 Score =  295 bits (756), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 189/466 (40%), Positives = 258/466 (55%), Gaps = 25/466 (5%)

Query: 594  GHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIHHVLSSVIAE 653
            G +L+ G  GSGK+ LA+A  K  E    L AHV ++ C  L  +++ +I   +     E
Sbjct: 601  GGVLLTGGKGSGKSTLAKAICK--EAFDRLDAHVEVIDCKALRGKRLGNIRKNVEEAFLE 658

Query: 654  GLEHAPSVXXXXXXXXXXXX--XXXTEGTQASVGVTMLTKFLTDVIDDYGEYRNSSCGIG 711
                 PS+                  E +  +V  + L   L D+I +          +G
Sbjct: 659  ASWRQPSIILLDDLDHIVGVPPTPEHENSPETVQSSRLAYVLKDLIKEV-------ISLG 711

Query: 712  PL-AFVASVQSLEQI-PQTLSSSGRFDFHV--QLAAPATSERGAILKHEIQKRLLDCS-- 765
             L A +A+ QS   + P  +S+ G   F     + +P   +R  +L   I+ +L +C   
Sbjct: 712  SLIALIATSQSEHALHPSLVSAQGTHIFQCFKCIQSPDQKQRCEMLCSVIKNKL-NCDVK 770

Query: 766  --EDILLNLAAK-CEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHD 822
               D+ L   AK  EG+ A D  +LVDRA+HA I      +    + NL   DF +A+ D
Sbjct: 771  KFSDLDLQYVAKETEGFVARDFTMLVDRAIHACISNQNAFQH--GELNLSTVDFQKALKD 828

Query: 823  FVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVL 882
            F P+A+R++  S  +   +GW+ +GG+ D++  + + I LP+K+P++FA  P+R RS VL
Sbjct: 829  FTPLALRNV--SLHKPKDIGWDRIGGLKDVRQILMDTIMLPAKYPELFANLPIRQRSGVL 886

Query: 883  LYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILF 942
            LYG PG GKT + G  A    + FISVKGPELL+KYIGASEQAVRDIFS+A AA PCI+F
Sbjct: 887  LYGAPGTGKTLLAGVVARESGMNFISVKGPELLSKYIGASEQAVRDIFSRAQAAKPCIVF 946

Query: 943  FDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSXXXXXXXXXXXXXX 1002
            FDEFDSIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATS              
Sbjct: 947  FDEFDSIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGR 1006

Query: 1003 XXXXXXCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSG 1048
                  C  P    R EIL  LS  L +A+D+DLE +A  TE F+G
Sbjct: 1007 LDKCLYCPPPDQSSRCEILKALSHSLSLANDVDLEYLAAKTEHFTG 1052

 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 63/164 (38%), Gaps = 10/164 (6%)

Query: 27  DCFVSLPRQLLHAXXXXXXXXXXXXXXVELRSGDRRWSVAWXXXX----XXXXAIEIARV 82
           DCF+ LP  L                 V++  GD    ++W              E+ R 
Sbjct: 26  DCFLHLPAVL------ASHLHLQQGQAVKVSYGDEPIYLSWMEIRHRGHRSENIAEMNRH 79

Query: 83  FAESISLPDGTVVKVRVLPNVPKATLVTVEPETEDDWXXXXXXXXXXXXXXXSQVRILHE 142
            AE + + DG  V +    +V     V VEP + DDW                Q+RI+  
Sbjct: 80  LAEKLGIADGEQVFLEPCSHVSSCQQVEVEPLSADDWEILELHASSLEKHLLDQIRIVFP 139

Query: 143 TMKFPLWLHDRTVIRFSVVSTFPSKGVVQLVPGTEVAVAPKRRD 186
              FP+W+   T I   + +  P+    +L P TE+ + PK R+
Sbjct: 140 KAIFPVWVEHHTHIYIRIGTLMPAAPYGRLEPRTELLICPKARE 183