BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= YGR239C__[Saccharomyces_cerevisiae]
(288 letters)
Database: nr.pal
6,348,806 sequences; 2,166,943,470 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45270444|gb|AAS56603.1| YGR239C [Saccharomyces cerevisiae] 498 e-139
gi|6321678|ref|NP_011755.1| Peroxin required for targeting ... 497 e-139
gi|1945339|emb|CAA97269.1| unnamed protein product [Sacchar... 230 7e-59
gi|156848378|ref|XP_001647071.1| hypothetical protein Kpol_... 76 2e-12
gi|50309283|ref|XP_454648.1| unnamed protein product [Kluyv... 75 7e-12
gi|45187722|ref|NP_983945.1| ADL151Wp [Ashbya gossypii ATCC... 69 4e-10
gi|50287775|ref|XP_446317.1| unnamed protein product [Candi... 57 1e-06
gi|154336223|ref|XP_001564347.1| ABC transporter-like prote... 38 0.88
gi|50289825|ref|XP_447344.1| hypothetical protein CAGL0I021... 37 1.6
gi|146299686|ref|YP_001194277.1| hypothetical protein Fjoh_... 35 6.2
>gi|45270444|gb|AAS56603.1| YGR239C [Saccharomyces cerevisiae]
Length = 288
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 267/288 (92%), Positives = 267/288 (92%)
Query: 1 MPSVCHTSPIEKIIQQGHRIQNDSLIPSKRTKLAHTELTAHYATEDSHVEKHFLHNGSNF 60
MPSVCHTSPIEKIIQQGHRIQNDSLIPSKRTKLAHTELTAHYATEDSHVEKHFLHNGSNF
Sbjct: 1 MPSVCHTSPIEKIIQQGHRIQNDSLIPSKRTKLAHTELTAHYATEDSHVEKHFLHNGSNF 60
Query: 61 DGIDNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQR 120
DGIDNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQR
Sbjct: 61 DGIDNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQR 120
Query: 121 LNSSRQHLPFKNCMIRKTSCTYPPQKTLRQQRQGNRDNPTDAFQFDAEFQVLEREIQKER 180
LNSSRQHLPFKNCMIRKTSCTYPPQKTLRQQRQGNRDNPTDAFQFDAEFQVLEREIQKER
Sbjct: 121 LNSSRQHLPFKNCMIRKTSCTYPPQKTLRQQRQGNRDNPTDAFQFDAEFQVLEREIQKER 180
Query: 181 YEPITRRDEKWFDQDQSELQRIATDIVKCCTPPPXXXXXXXXXXXXXXXXXXXXXFIQLM 240
YEPITRRDEKWFDQDQSELQRIATDIVKCCTPPP FIQLM
Sbjct: 181 YEPITRRDEKWFDQDQSELQRIATDIVKCCTPPPSSASSSSTLSSSVESKLSEWKFIQLM 240
Query: 241 RNISSGDVTLKKNADGNSASELFSSNNGELVGNRHIFVKDEIHKDILD 288
RNISSGDVTLKKNADGNSASELFSSNNGELVGNRHIFVKDEIHKDILD
Sbjct: 241 RNISSGDVTLKKNADGNSASELFSSNNGELVGNRHIFVKDEIHKDILD 288
>gi|6321678|ref|NP_011755.1| Peroxin required for targeting of peroxisomal matrix proteins
containing PTS2; interacts with Pex7p; partially
redundant with Pex18p; Pex21p [Saccharomyces cerevisiae]
gi|1723757|sp|P50091|PEX21_YEAST Peroxisomal membrane protein PEX21 (Peroxin-21)
gi|886935|emb|CAA61191.1| ORF 288 [Saccharomyces cerevisiae]
gi|1323433|emb|CAA97267.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151943513|gb|EDN61824.1| peroxin [Saccharomyces cerevisiae YJM789]
Length = 288
Score = 497 bits (1279), Expect = e-139, Method: Composition-based stats.
Identities = 267/288 (92%), Positives = 267/288 (92%)
Query: 1 MPSVCHTSPIEKIIQQGHRIQNDSLIPSKRTKLAHTELTAHYATEDSHVEKHFLHNGSNF 60
MPSVCHTSPIEKIIQQGHRIQNDSLIPSKRTKLAHTELTAHYATEDSHVEKHFLHNGSNF
Sbjct: 1 MPSVCHTSPIEKIIQQGHRIQNDSLIPSKRTKLAHTELTAHYATEDSHVEKHFLHNGSNF 60
Query: 61 DGIDNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQR 120
DGIDNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQR
Sbjct: 61 DGIDNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQR 120
Query: 121 LNSSRQHLPFKNCMIRKTSCTYPPQKTLRQQRQGNRDNPTDAFQFDAEFQVLEREIQKER 180
LNSSRQHLPFKNCMIRKTSCTYPPQKTLRQQRQGNRDNPTDAFQFDAEFQVLEREIQKER
Sbjct: 121 LNSSRQHLPFKNCMIRKTSCTYPPQKTLRQQRQGNRDNPTDAFQFDAEFQVLEREIQKER 180
Query: 181 YEPITRRDEKWFDQDQSELQRIATDIVKCCTPPPXXXXXXXXXXXXXXXXXXXXXFIQLM 240
YEPITRRDEKWFDQDQSELQRIATDIVKCCTPPP FIQLM
Sbjct: 181 YEPITRRDEKWFDQDQSELQRIATDIVKCCTPPPSSASSSSTLSSSVESKLSESKFIQLM 240
Query: 241 RNISSGDVTLKKNADGNSASELFSSNNGELVGNRHIFVKDEIHKDILD 288
RNISSGDVTLKKNADGNSASELFSSNNGELVGNRHIFVKDEIHKDILD
Sbjct: 241 RNISSGDVTLKKNADGNSASELFSSNNGELVGNRHIFVKDEIHKDILD 288
>gi|1945339|emb|CAA97269.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 123
Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats.
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MPSVCHTSPIEKIIQQGHRIQNDSLIPSKRTKLAHTELTAHYATEDSHVEKHFLHNGSNF 60
MPSVCHTSPIEKIIQQGHRIQNDSLIPSKRTKLAHTELTAHYATEDSHVEKHFLHNGSNF
Sbjct: 1 MPSVCHTSPIEKIIQQGHRIQNDSLIPSKRTKLAHTELTAHYATEDSHVEKHFLHNGSNF 60
Query: 61 DGIDNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQR 120
DGIDNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQR
Sbjct: 61 DGIDNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQR 120
Query: 121 LNS 123
LNS
Sbjct: 121 LNS 123
>gi|156848378|ref|XP_001647071.1| hypothetical protein Kpol_1050p71 [Vanderwaltozyma polyspora DSM
70294]
gi|156117754|gb|EDO19213.1| hypothetical protein Kpol_1050p71 [Vanderwaltozyma polyspora DSM
70294]
Length = 283
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 34/298 (11%)
Query: 1 MPSVCHTSPIEKIIQQGHRIQNDSLIPSKRTKLAHTELTAHYATEDSHVEKHFLHNGSNF 60
M SVC ++P+++ ++G + + R + E + + VE FL N +
Sbjct: 1 MSSVCQSNPLQQFARKGEQATGRWRLNEGRVQNRGGE------SIQNSVENEFLRNDESL 54
Query: 61 DGIDNVRYQNQP------SPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSN 114
++R NQP +P + V+ W+ +FS + I D LEFS YK+LYSN
Sbjct: 55 ----SIRGGNQPHNMFGRAPAQMGHSSGVVEKESWLNEFSKIAIKDPLEFSDRYKQLYSN 110
Query: 115 YESQQRLNSSR-----QHLPFKNCMIRKTSCTYPPQ--KTLRQQRQGNRDNPTDAFQFDA 167
YE++Q + S Q + N +++ Q +++ Q + D +
Sbjct: 111 YETRQTVTSMHNQGYYQPMSNMNLHVQQNWSMMEGQINQSMNSQETAHIDQAHNDLDMYL 170
Query: 168 EFQVLEREIQKERYEPITRRDEKWFDQDQSELQRIATDIVKCCTPPPXXXXXXXXXXXXX 227
E + + E++ + + + + Q+Q + + IATDIV C
Sbjct: 171 EKEFNDIELELQELDEHSHSEFASGVQEQQKFKEIATDIVDTCI--------TNNKNSTM 222
Query: 228 XXXXXXXXFIQLMRNISSGDVTLK--KNADGNS-ASELFSSNNGELVGNRHIFVKDEI 282
F+ LM IS G+VTLK ++ D N+ A EL+S+ G+ VGN ++D I
Sbjct: 223 TSKLAKSKFMGLMMQISDGEVTLKIDEHPDANTNAKELYSTKTGKTVGNDFHDIQDTI 280
>gi|50309283|ref|XP_454648.1| unnamed protein product [Kluyveromyces lactis]
gi|74605736|sp|Q6CN41|PEX21_KLULA Peroxisomal membrane protein PEX21 (Peroxin-21)
gi|49643783|emb|CAG99735.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 306
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 85 DSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQRLNSSRQHLPFKNCMIRKTSCTYPP 144
D W+ QF++M++ D EF ++YK++YS YE+ R S P M+ +
Sbjct: 89 DHHVWIDQFANMQVHDKTEFPTDYKQMYSQYEA--RGASYSMGAP---VMVSHSQMFPRH 143
Query: 145 QKTLRQQRQGNRDNPTDAFQFDAEFQVLEREIQKERYEPITRRDEKW-------FDQDQS 197
Q++L + ++ + + + D +F LER++Q + E +D+ + D+DQ
Sbjct: 144 QQSLMVNQLESQAYASSSAKLDEQFAELERQVQDDEKEQQQDKDDDFHLKETSPLDEDQR 203
Query: 198 ELQRIATDIVKCCTPPPXXXXXXXXXXXXXXXXXXXXXFIQLMRNISSGDVTLKKNADGN 257
+L+ A I F+ LMRNIS G +TLKKN D +
Sbjct: 204 QLKEAAQSIYT----------TLSDKSSTTSSKFSNSKFLGLMRNISDGVITLKKNPDED 253
Query: 258 SASELFSSNNGELVGNRHIFVKDEIHKDILD 288
+EL+S + GE G + V+D + D LD
Sbjct: 254 KYTELYSPSTGETFGEEYFPVQDSVLGDPLD 284
>gi|45187722|ref|NP_983945.1| ADL151Wp [Ashbya gossypii ATCC 10895]
gi|74694490|sp|Q75AS1|PEX21_ASHGO Peroxisomal membrane protein PEX21 (Peroxin-21)
gi|44982483|gb|AAS51769.1| ADL151Wp [Ashbya gossypii ATCC 10895]
Length = 307
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 85/199 (42%), Gaps = 20/199 (10%)
Query: 87 SDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQRLNSSRQHLPFKNCMIRKT--SCTYPP 144
+DWV QFSSM+++D L FS+EY+R Y+ YE +Q + + L + M T
Sbjct: 80 ADWVRQFSSMQVEDPLAFSAEYQRAYAGYEQRQAARPAARVLGYGGSMFMPTMPQQQLQQ 139
Query: 145 QKTLRQQRQGNRDNPTDAFQFDAEFQVLEREIQ-KERYEPITRRDEKWFDQDQSELQRIA 203
Q +Q Q + EF VLE E+ E E ++ D +Q Q A
Sbjct: 140 QVAPQQTAQAALQEAELERYLEREFDVLEGELAPPEVPEALS---APLLDHEQLGFQESA 196
Query: 204 TDIVKCCTPPPXXXXXXXXXXXXXXXXXXXXXFIQLMRNISSGDVTLKKNADGNSASELF 263
I + P F+ LMR +S+GDVTL K+ G + L
Sbjct: 197 KAIYATLSAP------------IHKDKFGASKFMGLMRQVSTGDVTLSKSESGYTG--LH 242
Query: 264 SSNNGELVGNRHIFVKDEI 282
+ GE VG + V DE+
Sbjct: 243 MTAGGEAVGAEYRAVTDEV 261
>gi|50287775|ref|XP_446317.1| unnamed protein product [Candida glabrata]
gi|74610253|sp|Q6FTX7|PEX21_CANGA Peroxisomal membrane protein PEX21 (Peroxin-21)
gi|49525624|emb|CAG59241.1| unnamed protein product [Candida glabrata CBS 138]
Length = 232
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 34/210 (16%)
Query: 49 VEKHFLHNGSNFDGI--DNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSS 106
VE FL N S + + + Q + T T +VD++ WV FSSMK+ D LEF+
Sbjct: 49 VEATFLQNNSGMNAVHPTTLNVQTHNAHATGRTIAKSVDTNSWVNDFSSMKVQDPLEFAD 108
Query: 107 EYKRLYSNYESQQRLNSSRQHLPFKNCMIRKTSCTYPPQKTLRQQRQGNRDNPTDAFQFD 166
YK LY YE +Q N+ P +N I + PQ TL + D
Sbjct: 109 SYKNLYKQYEQKQFHNTVPAQCP-RNLYIPTVT---RPQTTLNIVDHHEDKSSAVDQLID 164
Query: 167 AEFQVLEREIQKERYEPITRRDEKWFDQDQS-ELQRIATDIVKCCTPPPXXXXXXXXXXX 225
EF+ +E E++ DQ+Q E Q A ++ C
Sbjct: 165 DEFEKIEEEVK---------------DQNQKLEFQESAQSFIEIC------------ERS 197
Query: 226 XXXXXXXXXXFIQLMRNISSGDVTLKKNAD 255
F Q+M+ +S G+ T++++ +
Sbjct: 198 QMKEKLQRSKFFQVMQKVSDGEATIRQDGE 227
>gi|154336223|ref|XP_001564347.1| ABC transporter-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061382|emb|CAM38406.1| ABC transporter-like protein [Leishmania braziliensis]
Length = 2084
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 55 HNGSNFDGIDNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMK-----IDDSLEFSSEYK 109
H + + D+ YQN P+P F PN ++S SS++ ID L +S+
Sbjct: 1293 HQAAGAEAADSSTYQNNPTPPLFTKPNQVTEASRKSSAMSSVQTPAAGIDSLLPRASDLH 1352
Query: 110 RLYSNY 115
RL+ Y
Sbjct: 1353 RLFIEY 1358
>gi|50289825|ref|XP_447344.1| hypothetical protein CAGL0I02134g [Candida glabrata CBS138]
gi|49526654|emb|CAG60281.1| unnamed protein product [Candida glabrata CBS 138]
Length = 259
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 60/292 (20%), Positives = 118/292 (40%), Gaps = 48/292 (16%)
Query: 3 SVCHTSPIEKIIQQGHRIQNDSLIPSKRTKLAHTELTAHYATEDSHVEKHFLHNGSNFDG 62
S CH++P++ + + H + RT+ AH H + +E+ FLH S +D
Sbjct: 2 SACHSNPLQSLSSKTHTF-------TTRTR-AHNYEHNHDRISNP-LEREFLHQDSIYDT 52
Query: 63 IDNVRYQ-NQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQQRL 121
V QP + P +T ++ W+ +F + I D + R +
Sbjct: 53 ATPVAIPIQQPRQV----PRDTKKNTQWLSEFQQLSISDVPSVKPSFTRPAPTSTFRIIN 108
Query: 122 NSSRQHLPFKNCMIRKTSCTYPPQKTLRQQRQGNRDNPTDAFQFDAEFQVLEREIQK--- 178
N R+ FK + + + R++ ++ EF+ LE+E++
Sbjct: 109 NDVRKDSLFK----------FQEHPIIDRLSPEARED-----YYNNEFEQLEKELENDDD 153
Query: 179 ----ERYEPITRRDEKWFDQ----DQSELQRIATDIVKCCTPPPXXXXXXXXXXXXXXXX 230
++++ + + +++++ DQS Q+ A DI+
Sbjct: 154 VQDGDQFQDLENKTYEYYNEFAFNDQSHFQQSARDILN------NMSNSTHEYSSELNEK 207
Query: 231 XXXXXFIQLMRNISSGDVTLKKNADGNSASELFSSNNGELVGNRHIFVKDEI 282
F+ L+++I GDV+L+ N G EL +SN+ +GN++ + D I
Sbjct: 208 LSGSTFVNLLKSIDIGDVSLQDNRQG--PKELKNSNDNTTLGNKYADIPDYI 257
>gi|146299686|ref|YP_001194277.1| hypothetical protein Fjoh_1926 [Flavobacterium johnsoniae UW101]
gi|146154104|gb|ABQ04958.1| hypothetical protein Fjoh_1926 [Flavobacterium johnsoniae UW101]
Length = 657
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 59 NFDGIDNVRYQNQPSPLTFITPNNTVDSSDWVPQFSSMKIDDSLEFSSEYKRLYSNYESQ 118
N+ D +RY + P+PLT + N T++ V F ++ +L FS Y+ L S +
Sbjct: 122 NYIQADEIRYYSVPTPLTELFFNTTINKGQNVDSFITLNTSKNLNFSIAYRGLRSEGDYI 181
Query: 119 QRLNSS 124
+L S+
Sbjct: 182 NQLVSA 187