BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= YHR160C__[Saccharomyces_cerevisiae]
(283 letters)
Database: nr.pal
6,348,806 sequences; 2,166,943,470 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6321954|ref|NP_012030.1| Peroxin required for targeting ... 488 e-136
gi|151944106|gb|EDN62399.1| peroxin [Saccharomyces cerevisi... 486 e-135
gi|156848378|ref|XP_001647071.1| hypothetical protein Kpol_... 54 2e-05
gi|45187722|ref|NP_983945.1| ADL151Wp [Ashbya gossypii ATCC... 35 7.5
>gi|6321954|ref|NP_012030.1| Peroxin required for targeting of peroxisomal matrix proteins
containing PTS2; interacts with Pex7p; partially
redundant with Pex21p; Pex18p [Saccharomyces cerevisiae]
gi|731734|sp|P38855|PEX18_YEAST Peroxisomal membrane protein PEX18 (Peroxin-18)
gi|500666|gb|AAB68992.1| Yhr160cp [Saccharomyces cerevisiae]
Length = 283
Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats.
Identities = 270/283 (95%), Positives = 270/283 (95%)
Query: 1 MNSNRCQTNEVNKFISSTEKGPFTGRDNTLSFNKIGSRLNSPPILKDKIELKFLQHSEDL 60
MNSNRCQTNEVNKFISSTEKGPFTGRDNTLSFNKIGSRLNSPPILKDKIELKFLQHSEDL
Sbjct: 1 MNSNRCQTNEVNKFISSTEKGPFTGRDNTLSFNKIGSRLNSPPILKDKIELKFLQHSEDL 60
Query: 61 NQSRSYVNIRPRTLEDQSYKFEAPNLNDNETSWAKDFRYNFPKNVEPPIENQIANLNINN 120
NQSRSYVNIRPRTLEDQSYKFEAPNLNDNETSWAKDFRYNFPKNVEPPIENQIANLNINN
Sbjct: 61 NQSRSYVNIRPRTLEDQSYKFEAPNLNDNETSWAKDFRYNFPKNVEPPIENQIANLNINN 120
Query: 121 GLRTSQTDFPLGFYSQKNFNIASFPVVDHQIFKTTGLEHPINSHIDSLINXXXXXXXXXX 180
GLRTSQTDFPLGFYSQKNFNIASFPVVDHQIFKTTGLEHPINSHIDSLIN
Sbjct: 121 GLRTSQTDFPLGFYSQKNFNIASFPVVDHQIFKTTGLEHPINSHIDSLINAEFSELEASS 180
Query: 181 XXXDVHTEEENSGTSLEDEETAMKGLASDIIEFCDNNSANKDVKERLNSSKFMGLMGSIS 240
DVHTEEENSGTSLEDEETAMKGLASDIIEFCDNNSANKDVKERLNSSKFMGLMGSIS
Sbjct: 181 LEEDVHTEEENSGTSLEDEETAMKGLASDIIEFCDNNSANKDVKERLNSSKFMGLMGSIS 240
Query: 241 DGSIVLKKDNGTERNLQKHVGFCFQNSGNWAGLEFHDVEDRIA 283
DGSIVLKKDNGTERNLQKHVGFCFQNSGNWAGLEFHDVEDRIA
Sbjct: 241 DGSIVLKKDNGTERNLQKHVGFCFQNSGNWAGLEFHDVEDRIA 283
>gi|151944106|gb|EDN62399.1| peroxin [Saccharomyces cerevisiae YJM789]
Length = 283
Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats.
Identities = 268/283 (94%), Positives = 270/283 (95%)
Query: 1 MNSNRCQTNEVNKFISSTEKGPFTGRDNTLSFNKIGSRLNSPPILKDKIELKFLQHSEDL 60
MNSNRCQTNEVNKFISSTEKGPFTGRDNTLSF+KIGSRLNSPPILKDKIELKFLQHSEDL
Sbjct: 1 MNSNRCQTNEVNKFISSTEKGPFTGRDNTLSFSKIGSRLNSPPILKDKIELKFLQHSEDL 60
Query: 61 NQSRSYVNIRPRTLEDQSYKFEAPNLNDNETSWAKDFRYNFPKNVEPPIENQIANLNINN 120
NQS+SYVNIRPRTLEDQSYKFEAPNLNDNETSWAKDFRYNFPKNVEPPIENQIANLNINN
Sbjct: 61 NQSQSYVNIRPRTLEDQSYKFEAPNLNDNETSWAKDFRYNFPKNVEPPIENQIANLNINN 120
Query: 121 GLRTSQTDFPLGFYSQKNFNIASFPVVDHQIFKTTGLEHPINSHIDSLINXXXXXXXXXX 180
GLRTSQTDFPLGFYSQKNFNIASFPVVDHQIFKTTGLEHPINSHIDSLIN
Sbjct: 121 GLRTSQTDFPLGFYSQKNFNIASFPVVDHQIFKTTGLEHPINSHIDSLINAEFSELEASS 180
Query: 181 XXXDVHTEEENSGTSLEDEETAMKGLASDIIEFCDNNSANKDVKERLNSSKFMGLMGSIS 240
DVHTEEENSGTSLEDEETAMKGLASDIIEFCDNNSANKDVKERLNSSKFMGLMGSIS
Sbjct: 181 LEEDVHTEEENSGTSLEDEETAMKGLASDIIEFCDNNSANKDVKERLNSSKFMGLMGSIS 240
Query: 241 DGSIVLKKDNGTERNLQKHVGFCFQNSGNWAGLEFHDVEDRIA 283
DGSIVLKKDNGTERNLQKHVGFCFQNSGNWAGLEFHDVEDRIA
Sbjct: 241 DGSIVLKKDNGTERNLQKHVGFCFQNSGNWAGLEFHDVEDRIA 283
>gi|156848378|ref|XP_001647071.1| hypothetical protein Kpol_1050p71 [Vanderwaltozyma polyspora DSM
70294]
gi|156117754|gb|EDO19213.1| hypothetical protein Kpol_1050p71 [Vanderwaltozyma polyspora DSM
70294]
Length = 283
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 199 EETAMKGLASDIIEFCDNNSANKDVKERLNSSKFMGLMGSISDGSIVLKKDNGTERNLQK 258
E+ K +A+DI++ C N+ N + +L SKFMGLM ISDG + LK D + N
Sbjct: 198 EQQKFKEIATDIVDTCITNNKNSTMTSKLAKSKFMGLMMQISDGEVTLKIDEHPDANTNA 257
Query: 259 HVGFCFQNSGNWAGLEFHDVEDRIA 283
+ +G G +FHD++D I+
Sbjct: 258 KELYS-TKTGKTVGNDFHDIQDTIS 281
>gi|45187722|ref|NP_983945.1| ADL151Wp [Ashbya gossypii ATCC 10895]
gi|74694490|sp|Q75AS1|PEX21_ASHGO Peroxisomal membrane protein PEX21 (Peroxin-21)
gi|44982483|gb|AAS51769.1| ADL151Wp [Ashbya gossypii ATCC 10895]
Length = 307
Score = 34.7 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 224 KERLNSSKFMGLMGSISDGSIVLKKDNGTERNLQKHVGFCFQNSGNWAGLEFHDVEDRI 282
K++ +SKFMGLM +S G + L K L G G G E+ V D +
Sbjct: 209 KDKFGASKFMGLMRQVSTGDVTLSKSESGYTGLHMTAG------GEAVGAEYRAVTDEV 261