BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= YOR193W__[Saccharomyces_cerevisiae]
(376 letters)
Database: nr.pal
6,348,806 sequences; 2,166,943,470 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6324767|ref|NP_014836.1| Peripheral peroxisomal membrane... 610 e-173
gi|151945286|gb|EDN63529.1| peroxisome-related protein [Sac... 601 e-170
gi|51013093|gb|AAT92840.1| YPL112C [Saccharomyces cerevisiae] 47 0.003
gi|6325145|ref|NP_015213.1| Peripheral peroxisomal membrane... 47 0.003
gi|151942685|gb|EDN61031.1| peroxin [Saccharomyces cerevisi... 47 0.003
gi|50310185|ref|XP_455112.1| unnamed protein product [Kluyv... 39 0.84
gi|138893935|ref|YP_001124388.1| Amine oxidase, flavin-cont... 37 1.8
>gi|6324767|ref|NP_014836.1| Peripheral peroxisomal membrane protein involved in controlling
peroxisome size and number, interacts with homologous
protein Pex25p; Pex27p [Saccharomyces cerevisiae]
gi|74583735|sp|Q08580|PEX27_YEAST Peroxisomal membrane protein PEX27 (Peroxin-27)
gi|1431578|emb|CAA99406.1| unnamed protein product [Saccharomyces cerevisiae]
gi|51830532|gb|AAU09786.1| YOR193W [Saccharomyces cerevisiae]
Length = 376
Score = 610 bits (1572), Expect = e-173, Method: Composition-based stats.
Identities = 344/376 (91%), Positives = 344/376 (91%)
Query: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI
Sbjct: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
Query: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE
Sbjct: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
Query: 121 VCSKIXXXXXXXXXXXXXXXXXXXXNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
VCSKI NFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR
Sbjct: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
Query: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT
Sbjct: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
Query: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP
Sbjct: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
Query: 301 TNDKVNLELRKNNITLDFYKXXXXXXXXXXXXKGKRDKYNSELAYEIISVGSGVTELLKL 360
TNDKVNLELRKNNITLDFYK KGKRDKYNSELAYEIISVGSGVTELLKL
Sbjct: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL 360
Query: 361 WNRAKVTSANEHTSAV 376
WNRAKVTSANEHTSAV
Sbjct: 361 WNRAKVTSANEHTSAV 376
>gi|151945286|gb|EDN63529.1| peroxisome-related protein [Saccharomyces cerevisiae YJM789]
Length = 376
Score = 601 bits (1549), Expect = e-170, Method: Composition-based stats.
Identities = 339/376 (90%), Positives = 342/376 (90%)
Query: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKG IAKKPI
Sbjct: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGEIAKKPI 60
Query: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
VLQDNDDSDFTQNQGKVATATSTT+DRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE
Sbjct: 61 VLQDNDDSDFTQNQGKVATATSTTNDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
Query: 121 VCSKIXXXXXXXXXXXXXXXXXXXXNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
VCSKI NFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR
Sbjct: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
Query: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT
Sbjct: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
Query: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKE+ELKYKLP
Sbjct: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEHELKYKLP 300
Query: 301 TNDKVNLELRKNNITLDFYKXXXXXXXXXXXXKGKRDKYNSELAYEIISVGSGVTELLKL 360
TNDKVNLELRKNNITLDFYK KGKRDKYN ELAYEIISVGSGVTELLKL
Sbjct: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNLELAYEIISVGSGVTELLKL 360
Query: 361 WNRAKVTSANEHTSAV 376
WN+AKVTSANEHTSAV
Sbjct: 361 WNQAKVTSANEHTSAV 376
>gi|51013093|gb|AAT92840.1| YPL112C [Saccharomyces cerevisiae]
Length = 394
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 39/247 (15%)
Query: 146 NFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLREMKKLHYK-DQSILFYFKNF 204
NF K+ + QQLS FRY LRFG + + +F + +K +++ DQ +F
Sbjct: 152 NFDKKIDFISQQLSTFRYILRFGGTPFRVCSFLGKF---NKTRKCNFQIDQIKKIWFNEA 208
Query: 205 RFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAIN 264
+ ++ +Y + DEL L +KL+ K +FV Q + W+ +L++
Sbjct: 209 SLREFLDLYYGIFDELDLLYKLKIWTNKS---------FYSFVSRQESLAWQYDILLSLK 259
Query: 265 KNIEQWRQLIRDEIYLSI-YNTSGNAI---------------KEYELKYKLPTNDKVN-- 306
+ + L + ++ L + NA+ + ++ +L + VN
Sbjct: 260 DHWLNLQSLQKRQLELEVQLKVQNNALLLSPILMHQAHKDDGSQSPIRKQLLNDLNVNND 319
Query: 307 --------LELRKNNITLDFYKXXXXXXXXXXXXKGKRDKYNSELAYEIISVGSGVTELL 358
L+ K+ TL + + + Y ++S+GSG+T L+
Sbjct: 320 AEVLIHKQLKAIKDEKTLVYLDIARLSFDCMANTSDILNLKTPKGTYAVLSLGSGLTGLV 379
Query: 359 KLWNRAK 365
KLW K
Sbjct: 380 KLWITTK 386
>gi|6325145|ref|NP_015213.1| Peripheral peroxisomal membrane peroxin required for the regulation
of peroxisome size and maintenance, recruits GTPase
Rho1p to peroxisomes, induced by oleate, interacts with
homologous protein Pex27p; Pex25p [Saccharomyces
cerevisiae]
gi|74676329|sp|Q02969|PEX25_YEAST Peroxisomal membrane protein PEX25 (Peroxin-25)
gi|1163101|gb|AAB68249.1| Ypl112cp [Saccharomyces cerevisiae]
Length = 394
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 39/247 (15%)
Query: 146 NFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLREMKKLHYK-DQSILFYFKNF 204
NF K+ + QQLS FRY LRFG + + +F + +K +++ DQ +F
Sbjct: 152 NFDKKIDFISQQLSTFRYILRFGGTPFRVCSFLGKF---NKTRKCNFQIDQIKKIWFNEA 208
Query: 205 RFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAIN 264
+ ++ +Y + DEL L +KL+ K +FV Q + W+ +L++
Sbjct: 209 SLREFLDLYYGIFDELDLLYKLKIWTNKS---------FYSFVSRQESLAWQYDILLSLK 259
Query: 265 KNIEQWRQLIRDEIYLSI-YNTSGNAI---------------KEYELKYKLPTNDKVN-- 306
+ + L + ++ L + NA+ + ++ +L + VN
Sbjct: 260 DHWLNLQSLQKRQLELEVQLKVQNNALLLSPILMHQAHKDDGSQSPIRKQLLNDLNVNND 319
Query: 307 --------LELRKNNITLDFYKXXXXXXXXXXXXKGKRDKYNSELAYEIISVGSGVTELL 358
L+ K+ TL + + + Y ++S+GSG+T L+
Sbjct: 320 AEVLIHKQLKAIKDEKTLVYLDIARLSFDCMANTSDILNLKTPKGTYAVLSLGSGLTGLV 379
Query: 359 KLWNRAK 365
KLW K
Sbjct: 380 KLWITTK 386
>gi|151942685|gb|EDN61031.1| peroxin [Saccharomyces cerevisiae YJM789]
Length = 394
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 146 NFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLREMKKLHYK-DQSILFYFKNF 204
NF K+ + QQLS FRY LRFG + + +F + +K +++ DQ +F
Sbjct: 152 NFDKKIDFISQQLSTFRYILRFGGTPFRVCSFLGKF---NKTRKCNFQIDQIKKIWFDEA 208
Query: 205 RFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAIN 264
+ ++ +Y + DEL L +KL+ K +FV Q + W+ +L++
Sbjct: 209 SLREFLDLYYGIFDELDLLYKLKIWTNKS---------FYSFVSRQESLAWQYDILLSLK 259
Query: 265 KNIEQWRQLIRDEIYLSI 282
+ + L + ++ L +
Sbjct: 260 DHWLNLQSLQKRQLELEV 277
>gi|50310185|ref|XP_455112.1| unnamed protein product [Kluyveromyces lactis]
gi|49644248|emb|CAG97819.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 431
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 20/144 (13%)
Query: 147 FSSKLRLVIQQLSLFRYYLRFGNFAINLY----KIIKRFRWLREMKKLHYKDQSILFYFK 202
F K LV QL +R +R G LY K+I F ++ LH K L ++K
Sbjct: 184 FLEKGALVSSQLGFYRQIMRCGGTPFRLYHWYQKLISTFYASQKSSTLHSKG---LVWYK 240
Query: 203 NF----RFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVL 258
N+ + I+ +Y + DEL+L +KL+ K + +V + + W
Sbjct: 241 NWWNEESLSEFIDLYYGIMDELMLLYKLKLWSNKS---------MHAWVSKHEALSWYYD 291
Query: 259 NILAINKNIEQWRQLIRDEIYLSI 282
+L + KN E+ + + + E L I
Sbjct: 292 IMLGLKKNWEKLQSIKQQEFELKI 315
>gi|138893935|ref|YP_001124388.1| Amine oxidase, flavin-containing [Geobacillus thermodenitrificans
NG80-2]
gi|134265448|gb|ABO65643.1| Amine oxidase, flavin-containing [Geobacillus thermodenitrificans
NG80-2]
Length = 480
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 153 LVIQQLSLFRY--YLRFGNF-------AINLYKIIKRFRWLREMKKLHYKDQSILFYFKN 203
+VI+QL + + YLR+ F AI++ K + E+ L + + + N
Sbjct: 164 IVIEQLDRYSFDTYLRYNPFGLRLSVGAIDMIKAVLSLEGFPELSFLGLLRELMTLFTPN 223
Query: 204 FRFFDII-------EAFY-NLTDELILFHKLQSMFGKKN--TSHANTNRLM 244
RF+ I+ +AF L DEL+ HK+Q + KN T HA +++
Sbjct: 224 MRFYKIVGGNDRLPKAFLPQLKDELLFSHKVQKIVQNKNSVTIHAIHTKIL 274