BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= AT1G48635__[Arabidopsis_thaliana]
(364 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,899,187 sequences; 2,350,152,223 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_683410.1| PEX3/PEX3-2 (PEROXIN 3-2) [Arabidopsis tha... 690 0.0
gb|AAG60126.1|AC073555_10 lysine and histidine specific tra... 665 0.0
gb|AAG50845.1|AC074308_1 hypothetical protein, 3' partial [... 615 e-174
gb|AAM63222.1| unknown [Arabidopsis thaliana] 536 e-151
ref|NP_566598.1| PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana] 536 e-150
emb|CAO68158.1| unnamed protein product [Vitis vinifera] 439 e-121
ref|NP_974332.1| PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana] 431 e-119
ref|NP_001062839.1| Os09g0314300 [Oryza sativa (japonica cu... 306 1e-81
gb|EAZ08561.1| hypothetical protein OsI_029793 [Oryza sativ... 296 1e-78
dbj|BAB02028.1| unnamed protein product [Arabidopsis thaliana] 265 5e-69
ref|XP_001769437.1| predicted protein [Physcomitrella paten... 192 3e-47
ref|XP_001753372.1| predicted protein [Physcomitrella paten... 183 2e-44
ref|XP_001755103.1| predicted protein [Physcomitrella paten... 181 7e-44
emb|CAO68151.1| unnamed protein product [Vitis vinifera] 152 5e-35
ref|XP_780894.2| PREDICTED: similar to peroxisomal biogenes... 108 7e-22
ref|XP_001176855.1| PREDICTED: similar to peroxisomal bioge... 108 7e-22
ref|XP_419708.1| PREDICTED: similar to peroxisomal biogenes... 106 3e-21
ref|NP_001092457.1| peroxisomal biogenesis factor 3 [Bos ta... 103 3e-20
ref|XP_518776.1| PREDICTED: peroxisomal biogenesis factor 3... 102 5e-20
ref|XP_001091411.1| PREDICTED: peroxisomal biogenesis facto... 102 6e-20
ref|NP_003621.1| peroxisomal biogenesis factor 3 [Homo sapi... 101 8e-20
gb|AAX37078.1| peroxisomal biogenesis factor 3 [synthetic c... 101 8e-20
ref|NP_956522.1| peroxisomal biogenesis factor 3 [Danio rer... 100 2e-19
ref|XP_001331521.1| PREDICTED: hypothetical protein [Danio ... 100 2e-19
sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 (Perox... 100 2e-19
ref|XP_001507262.1| PREDICTED: similar to peroxisomal bioge... 98 9e-19
ref|XP_001370565.1| PREDICTED: similar to peroxisomal bioge... 98 1e-18
ref|XP_541132.2| PREDICTED: similar to Peroxisomal biogenes... 97 1e-18
ref|NP_112640.1| peroxisomal biogenesis factor 3 [Rattus no... 97 3e-18
ref|XP_001497293.1| PREDICTED: similar to peroxisomal bioge... 96 3e-18
gb|EDL03500.1| peroxisomal biogenesis factor 3, isoform CRA... 96 4e-18
ref|NP_064345.1| peroxisomal biogenesis factor 3 [Mus muscu... 96 5e-18
dbj|BAC35986.1| unnamed protein product [Mus musculus] 96 6e-18
ref|NP_001085641.1| MGC82731 protein [Xenopus laevis] >gi|4... 96 7e-18
ref|NP_001039031.1| peroxisomal biogenesis factor 3 [Xenopu... 94 2e-17
gb|EDL03499.1| peroxisomal biogenesis factor 3, isoform CRA... 88 1e-15
ref|XP_001635320.1| predicted protein [Nematostella vectens... 87 3e-15
ref|XP_001863328.1| peroxisomal biogenesis factor 3 [Culex ... 87 3e-15
ref|XP_001172297.1| PREDICTED: similar to Pex3 protein isof... 86 4e-15
ref|NP_001040264.1| peroxisomal biogenesis factor 3 [Bombyx... 84 2e-14
ref|XP_001661904.1| perixosomal biogenesis factor [Aedes ae... 83 4e-14
dbj|BAE91223.1| unnamed protein product [Macaca fascicularis] 80 2e-13
ref|XP_625168.1| PREDICTED: similar to CG6859-PA [Apis mell... 79 8e-13
ref|XP_001604955.1| PREDICTED: similar to perixosomal bioge... 78 1e-12
ref|XP_312432.3| AGAP002507-PA [Anopheles gambiae str. PEST... 74 2e-11
gb|AAI58162.1| Unknown (protein for MGC:135489) [Xenopus tr... 70 3e-10
emb|CAD92492.1| peroxisomal biogenesis factor 3 [Homo sapiens] 69 7e-10
ref|XP_970039.1| PREDICTED: similar to CG6859-PA [Tribolium... 69 8e-10
ref|XP_659885.1| hypothetical protein AN2281.2 [Aspergillus... 67 2e-09
ref|XP_001218024.1| conserved hypothetical protein [Aspergi... 67 2e-09
ref|XP_001353169.1| GA19910-PA [Drosophila pseudoobscura] >... 67 2e-09
ref|NP_648753.1| CG6859 CG6859-PA [Drosophila melanogaster]... 67 3e-09
sp|Q92262|PEX3_PICPA Peroxisomal biogenesis factor 3 (Perox... 64 1e-08
ref|XP_001730507.1| hypothetical protein MGL_2303 [Malassez... 64 2e-08
ref|XP_001817054.1| hypothetical protein [Aspergillus oryza... 64 2e-08
gb|ABH11414.1| peroxin 3 [Penicillium chrysogenum] 62 5e-08
ref|XP_001266008.1| peroxisomal membrane protein (Pex3), pu... 61 1e-07
ref|XP_505754.1| YlPEX3 [Yarrowia lipolytica] >gi|54036237|... 60 2e-07
gb|EDP51377.1| peroxisomal membrane protein (Pex3), putativ... 60 3e-07
ref|XP_501103.1| hypothetical protein [Yarrowia lipolytica]... 60 3e-07
ref|XP_754003.1| peroxisomal membrane protein (Pex3) [Asper... 60 4e-07
ref|XP_001273964.1| peroxisomal membrane protein (Pex3), pu... 59 5e-07
ref|XP_369909.2| hypothetical protein MGG_06424 [Magnaporth... 57 3e-06
ref|XP_001555052.1| hypothetical protein BC1G_06575 [Botryo... 56 4e-06
ref|XP_387118.1| hypothetical protein FG06942.1 [Gibberella... 56 5e-06
ref|XP_001598504.1| hypothetical protein SS1G_00593 [Sclero... 56 5e-06
ref|XP_001242086.1| hypothetical protein CIMG_05982 [Coccid... 56 6e-06
ref|XP_640890.1| transmembrane protein [Dictyostelium disco... 55 8e-06
ref|XP_001398373.1| hypothetical protein An17g01440 [Asperg... 54 2e-05
ref|XP_762347.1| hypothetical protein UM06200.1 [Ustilago m... 51 1e-04
ref|XP_001805510.1| hypothetical protein SNOG_15360 [Phaeos... 51 1e-04
emb|CAF91476.1| unnamed protein product [Tetraodon nigrovir... 51 2e-04
gb|EDU40742.1| peroxisomal membrane protein (Pex3) [Pyrenop... 49 7e-04
ref|XP_962987.1| hypothetical protein NCU06175 [Neurospora ... 48 0.001
sp|Q01497|PEX3_PICAN Peroxisomal biogenesis factor 3 (Perox... 44 0.016
ref|XP_001229801.1| hypothetical protein CHGG_03285 [Chaeto... 44 0.020
ref|XP_713871.1| hypothetical protein CaO19.4426 [Candida a... 44 0.021
ref|XP_001908169.1| unnamed protein product [Podospora anse... 44 0.021
ref|NP_594868.2| peroxin-3 (predicted) [Schizosaccharomyces... 44 0.022
ref|NP_010616.1| Peroxisomal membrane protein (PMP) require... 43 0.039
pir||T38475 hypothetical protein SPAC29A4.14c - fission yea... 43 0.044
ref|XP_714071.1| peroxisomal integral membrane protein Pex3... 43 0.046
ref|XP_001528327.1| conserved hypothetical protein [Loddero... 42 0.063
ref|XP_001485386.1| hypothetical protein PGUG_03115 [Pichia... 42 0.064
ref|XP_001385728.2| Peroxisomal biogenesis factor 3 (Peroxi... 40 0.24
gb|AAB52665.2| Peroxisome assembly factor protein 3, isofor... 40 0.28
ref|XP_001676849.1| Hypothetical protein CBG14834 [Caenorha... 40 0.28
gb|EEH36161.1| peroxin 3 [Paracoccidioides brasiliensis Pb01] 39 0.75
ref|XP_449403.1| hypothetical protein CAGL0M01342g [Candida... 38 1.0
ref|XP_776678.1| hypothetical protein CNBC1690 [Cryptococcu... 37 1.9
ref|XP_569751.1| Pex3p [Cryptococcus neoformans var. neofor... 37 1.9
ref|ZP_02737591.1| hypothetical protein GobsU_37630 [Gemmat... 37 2.2
ref|XP_001892993.1| Peroxin-3 family protein [Brugia malayi... 37 2.8
ref|YP_001418953.1| GntR domain protein [Xanthobacter autot... 36 4.1
ref|XP_001601404.1| PREDICTED: similar to 3-hydroxy-3-methy... 36 4.6
ref|ZP_01134112.1| EAL domain protein [Pseudoalteromonas tu... 35 7.0
emb|CAC09577.1| protein phosphatase 2C (PP2C) [Fagus sylvat... 35 7.5
ref|ZP_03896069.1| uncharacterized domain HDIG-containing p... 35 9.1
ref|XP_001819725.1| hypothetical protein [Aspergillus oryza... 35 9.7
>ref|NP_683410.1| PEX3/PEX3-2 (PEROXIN 3-2) [Arabidopsis thaliana]
gb|AAL75911.1| At1g48640/F11I4_17 [Arabidopsis thaliana]
gb|AAM70527.1| At1g48640/F11I4_17 [Arabidopsis thaliana]
dbj|BAD43104.1| unknown protein [Arabidopsis thaliana]
Length = 364
Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats.
Identities = 364/364 (100%), Positives = 364/364 (100%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM
Sbjct: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK
Sbjct: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH
Sbjct: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV
Sbjct: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA
Sbjct: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
Query: 361 NMPQ 364
NMPQ
Sbjct: 361 NMPQ 364
>gb|AAG60126.1|AC073555_10 lysine and histidine specific transporter, putative [Arabidopsis
thaliana]
Length = 809
Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats.
Identities = 340/372 (91%), Positives = 342/372 (91%), Gaps = 30/372 (8%)
Query: 10 KHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ---------- 59
+HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ
Sbjct: 7 EHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQLSSVLIKTDP 66
Query: 60 --------------------MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR 99
MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR
Sbjct: 67 LDFSSYGFSNGPVLFVLLFRMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR 126
Query: 100 LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA 159
LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA
Sbjct: 127 LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA 186
Query: 160 LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR 219
LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR
Sbjct: 187 LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR 246
Query: 220 VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL 279
VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL
Sbjct: 247 VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL 306
Query: 280 ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 339
ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN
Sbjct: 307 ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 366
Query: 340 RFLQIIRDLPEV 351
RFLQIIRDLPE+
Sbjct: 367 RFLQIIRDLPEI 378
>gb|AAG50845.1|AC074308_1 hypothetical protein, 3' partial [Arabidopsis thaliana]
Length = 443
Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats.
Identities = 330/362 (91%), Positives = 331/362 (91%), Gaps = 30/362 (8%)
Query: 10 KHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ---------- 59
+HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ
Sbjct: 7 EHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQLSSVLIKTDP 66
Query: 60 --------------------MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR 99
MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR
Sbjct: 67 LDFSSYGFSNGPVLFVLLFRMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDR 126
Query: 100 LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA 159
LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA
Sbjct: 127 LNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARA 186
Query: 160 LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR 219
LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR
Sbjct: 187 LGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR 246
Query: 220 VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL 279
VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL
Sbjct: 247 VLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVL 306
Query: 280 ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 339
ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN
Sbjct: 307 ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 366
Query: 340 RF 341
R
Sbjct: 367 RL 368
>gb|AAM63222.1| unknown [Arabidopsis thaliana]
Length = 358
Score = 536 bits (1382), Expect = e-151, Method: Composition-based stats.
Identities = 281/364 (77%), Positives = 318/364 (87%), Gaps = 6/364 (1%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MD VRG WRKHRRK+LVT CLGSGYLLYKLYN+HTR+LADLERELA+ERENDEIIKTQM
Sbjct: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQLW+ELK
Sbjct: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSHLL+E+DLI+RDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
L+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMSTGSPHH
Sbjct: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N+ EISLKC LV
Sbjct: 241 WVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLASNDFSNVAEISLKCCAVALV 297
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLFFTLLYA
Sbjct: 298 EEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 354
Query: 361 NMPQ 364
NMPQ
Sbjct: 355 NMPQ 358
>ref|NP_566598.1| PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana]
Length = 358
Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats.
Identities = 281/364 (77%), Positives = 318/364 (87%), Gaps = 6/364 (1%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MD VRG WRKHRRK+LVT CLGSGYLLYKLYN+HTR+LADLERELA+ERENDEIIKTQM
Sbjct: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQLW+ELK
Sbjct: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSHLL+E+DLI+RDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
L+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMSTGSPHH
Sbjct: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N+ EISLKC LV
Sbjct: 241 WVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCCAVALV 297
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLFFTLLYA
Sbjct: 298 EEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 354
Query: 361 NMPQ 364
NMPQ
Sbjct: 355 NMPQ 358
>emb|CAO68158.1| unnamed protein product [Vitis vinifera]
Length = 375
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 230/366 (62%), Positives = 287/366 (78%), Gaps = 10/366 (2%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
FWR+HRRK+ V+ G GSGYLLYKLY++H RRL DLERELA +REN+E+IK QM+AHFES
Sbjct: 9 FWRRHRRKIFVSVGVFGSGYLLYKLYDAHRRRLDDLERELAVQRENEELIKAQMQAHFES 68
Query: 67 IQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGM---LSPPEKLQLWDELKILS 123
IQ I D+TTLPH+M +LS RI+EE+D+SH+ +RL +GKG L+P EKL+LWD LKILS
Sbjct: 69 IQRIADTTTLPHSMLYLSGRIAEELDLSHLTERLMKGKGQPNTLTPSEKLELWDRLKILS 128
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTRMVLSLW++TMLSLYIRVQVNILGRHLY+DTAR GSSHLLEE D IDR D+QKFL+S
Sbjct: 129 FTRMVLSLWAMTMLSLYIRVQVNILGRHLYIDTARGGGSSHLLEEADPIDRHDQQKFLAS 188
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVD 243
ADFL ++P+LIS+M +A EVLKGKQL+DV + VL T+MQI+D+F+STG PH+ VD
Sbjct: 189 ADFLSNYSIPALISNMHAAAAEVLKGKQLRDVFNSMVLHGTIMQILDLFISTGKPHNLVD 248
Query: 244 YLMMPQDTK----LSRTTSDSSDEA-VSKFHQLMVETREVLISTEFTNIVEISLKCFTDV 298
YL MP DTK S + DSS A V+KF QLMVETR VL S EF N++++SL+ D
Sbjct: 249 YL-MPDDTKSYKPASPSNGDSSTPADVTKFDQLMVETRAVLSSAEFINVIDVSLRTVVDA 307
Query: 299 LVEEME-TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTL 357
+VE+M Q G ++G LAK+LP++ + ++ EPSKNRF+QII+ PEV+ FFTL
Sbjct: 308 VVEDMMGVQLGGGSPSSGMVLAKLLPRVAQMGPLLLEEPSKNRFIQIIQKAPEVEFFFTL 367
Query: 358 LYANMP 363
LYANMP
Sbjct: 368 LYANMP 373
>ref|NP_974332.1| PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana]
Length = 304
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 230/310 (74%), Positives = 266/310 (85%), Gaps = 6/310 (1%)
Query: 55 IIKTQMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQ 114
++ +MKAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQ
Sbjct: 1 MLYVRMKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQ 60
Query: 115 LWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDR 174
LW+ELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSHLL+E+DLI+R
Sbjct: 61 LWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIER 120
Query: 175 DDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS 234
DDEQKFL+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMS
Sbjct: 121 DDEQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMS 180
Query: 235 TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKC 294
TGSPHHWVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N+ EISLKC
Sbjct: 181 TGSPHHWVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKC 237
Query: 295 FTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLF 354
LVEEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLF
Sbjct: 238 CAVALVEEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLF 294
Query: 355 FTLLYANMPQ 364
FTLLYANMPQ
Sbjct: 295 FTLLYANMPQ 304
>ref|NP_001062839.1| Os09g0314300 [Oryza sativa (japonica cultivar-group)]
dbj|BAD33995.1| peroxisomal biogenesis factor 3-like [Oryza sativa Japonica Group]
dbj|BAF24753.1| Os09g0314300 [Oryza sativa (japonica cultivar-group)]
Length = 380
Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats.
Identities = 168/373 (45%), Positives = 241/373 (64%), Gaps = 15/373 (4%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
RGFW +HRRK+LV+ G G+GY Y+ +SH R+L +E+ ER +EIIK Q++ HF
Sbjct: 6 RGFWGRHRRKILVSLGVAGAGYAAYRYLDSHRRQLVRVEQRALEERAAEEIIKNQLQTHF 65
Query: 65 ESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKG-----MLSPPEKLQLWDEL 119
E++Q I D+TTLP AM +L RI EE+D+SH+ ++L GKG L+P EK W+++
Sbjct: 66 ENVQKISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDTWEKI 125
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQK 179
KILSFTR V S+W++T+LSLY+RVQV ILGRHLY+D AR + L E D + +
Sbjct: 126 KILSFTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQLQEGSDTFSKSGHKD 185
Query: 180 FLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPH 239
FL++AD+L T + +LI+ MQ +A E+LK KQLKD + + ET++QI+ FM +
Sbjct: 186 FLATADYLATYGINALITKMQHAATEILKEKQLKDPMGIDEVLETILQILKQFMGLCEDN 245
Query: 240 HWVDYLMMPQD----TKLSRTTSDSSDEA-----VSKFHQLMVETREVLISTEFTNIVEI 290
W++YL +P++ +L +S D++ V K QLM ETR VL S +F NI++
Sbjct: 246 SWINYL-VPENANVYAQLMAVSSSGFDDSSLLKDVRKLDQLMSETRIVLSSDDFRNIMDR 304
Query: 291 SLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPE 350
SLK V+VE++ Q A G PLAK+L ++ + + EP KN+ +QIIR +PE
Sbjct: 305 SLKKIASVVVEDLAVQIGAPIPPPGLPLAKLLAKVAQLSLPLLEEPDKNKHIQIIRSMPE 364
Query: 351 VKLFFTLLYANMP 363
V+LF+T LYANMP
Sbjct: 365 VELFYTFLYANMP 377
>gb|EAZ08561.1| hypothetical protein OsI_029793 [Oryza sativa (indica
cultivar-group)]
gb|EAZ44208.1| hypothetical protein OsJ_027691 [Oryza sativa (japonica
cultivar-group)]
Length = 376
Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats.
Identities = 166/373 (44%), Positives = 238/373 (63%), Gaps = 19/373 (5%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
RGFW +HRRK+LV+ G G+GY Y+ +SH R+L +E+ ER +EIIK Q++ HF
Sbjct: 6 RGFWGRHRRKILVSLGVAGAGYAAYRYLDSHRRQLVRVEQRALEERAAEEIIKNQLQTHF 65
Query: 65 ESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKG-----MLSPPEKLQLWDEL 119
E++Q I D+TTLP AM +L RI EE+D+SH+ ++L GKG L+P EK W+++
Sbjct: 66 ENVQKISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDTWEKI 125
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQK 179
KILSFTR V S+W++T+LSLY+RVQV ILGRHLY+D AR + L E D + +
Sbjct: 126 KILSFTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQLQEGSDTFSKSGHKD 185
Query: 180 FLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPH 239
FL++AD+L T + +LI+ MQ +A E+LK KQLKD + + ET++QI+ FM +
Sbjct: 186 FLATADYLATYGINALITKMQHAATEILKEKQLKDPMGIDEVLETILQILKQFMGLCEDN 245
Query: 240 HWVDYLMMPQD----TKLSRTTSDSSDEA-----VSKFHQLMVETREVLISTEFTNIVEI 290
W++YL +P++ +L +S D++ V K QLM ETR VL NI++
Sbjct: 246 SWINYL-VPENANVYAQLMAVSSSGFDDSSLLKDVRKLDQLMSETRIVLSR----NIMDR 300
Query: 291 SLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPE 350
SLK V+VE++ Q A G PLAK+L ++ + + EP KN+ +QIIR +PE
Sbjct: 301 SLKKIASVVVEDLAVQIGAPIPPPGLPLAKLLAKVAQLSLPLLEEPDKNKHIQIIRSMPE 360
Query: 351 VKLFFTLLYANMP 363
V+LF+T LYANMP
Sbjct: 361 VELFYTFLYANMP 373
>dbj|BAB02028.1| unnamed protein product [Arabidopsis thaliana]
Length = 197
Score = 265 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 144/198 (72%), Positives = 165/198 (83%), Gaps = 6/198 (3%)
Query: 167 EEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVM 226
+E+DLI+RDDEQKFL+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM
Sbjct: 6 DELDLIERDDEQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVM 65
Query: 227 QIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTN 286
+I+DVFMSTGSPHHWVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N
Sbjct: 66 RILDVFMSTGSPHHWVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLTSNDFSN 122
Query: 287 IVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIR 346
+ EISLKC LVEEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IR
Sbjct: 123 VAEISLKCCAVALVEEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIR 179
Query: 347 DLPEVKLFFTLLYANMPQ 364
DLPEVKLFFTLLYANMPQ
Sbjct: 180 DLPEVKLFFTLLYANMPQ 197
>ref|XP_001769437.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ65806.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 133/380 (35%), Positives = 210/380 (55%), Gaps = 26/380 (6%)
Query: 2 DFVRGFWRKHRRKVLVTAGCLGSG----YLLYKL-YNSHTRRLADLERELAHERENDEII 56
DF + + +KH+R +LV AG +G G Y L+ L S R+ D R RE +E
Sbjct: 12 DF-KAWVKKHQRSLLVAAGLVGGGSAVYYGLHYLGLTSQARKERDAARAALLHREAEERA 70
Query: 57 KTQMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKG---MLSPPEKL 113
+ Q+++HFESIQ I D+TTLP + L + ++D+S + ++L GK LS +K+
Sbjct: 71 EAQLQSHFESIQRISDTTTLPSVLPQLKASLFSKVDLSGLTEKLILGKDDPQALSQRDKM 130
Query: 114 QLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLID 173
QLW ELK LSFTR V ++ ++++L L+IR+Q+NILGR +Y DTAR + L +
Sbjct: 131 QLWQELKTLSFTRTVCAMSALSLLDLFIRIQLNILGRRVYFDTARDFMNPEDLHAP--LS 188
Query: 174 RDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFM 233
+ KF++ A +L + +L+ D+ +AE L+GKQLK+ T L+ ++I+
Sbjct: 189 MSVQHKFIAFAGYLHHKGLAALVGDIYKAAEIELRGKQLKESFTLYDLKNVFVRILATLD 248
Query: 234 STGSPHHWVDYLM-----MPQD----TKLSRTTSDSSDEAVSK---FHQLMVETREVLIS 281
S WV Y++ +P+D + + ++ +D A S QLM ETR VL S
Sbjct: 249 SKRPA--WVQYVLPPDNVLPEDLAGASSAADASNQFADVATSDNEVLDQLMNETRAVLAS 306
Query: 282 TEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
EF + + L+ D ++EE+ T G +G PLAK+LP + + + P +NRF
Sbjct: 307 NEFHEVQAVCLEVMLDGVMEELYT-IYRGSSDSGIPLAKLLPPVAGAGSTLLEHPDENRF 365
Query: 342 LQIIRDLPEVKLFFTLLYAN 361
++I+ LP+V F L+Y N
Sbjct: 366 IRILASLPQVHAFCALVYTN 385
>ref|XP_001753372.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ81595.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 399
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 123/380 (32%), Positives = 204/380 (53%), Gaps = 30/380 (7%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKL-----YNSHTRRLADLERELAHERENDEIIKT 58
++ + +K+RR +L+ AG +G G +Y +S +R+ D R ++E +E +
Sbjct: 13 LKAWVKKYRRSLLIAAGLVGGGTAIYYGVQYLGLDSQSRKERDAARVALVQKEAEERAEV 72
Query: 59 QMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGK---GMLSPPEKLQL 115
Q+++HFE IQ I DSTTLP + L + ++D+ + D+L K +LS +K+QL
Sbjct: 73 QLQSHFEGIQRISDSTTLPSVLPHLKASLYSKVDLEGLTDKLMLCKVDPQLLSHRDKMQL 132
Query: 116 WDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRD 175
W ELK SF R V ++ +V++L L+IR+Q+NILGR +Y DTAR + +S + +
Sbjct: 133 WQELKTRSFARTVCAMTAVSLLDLFIRIQLNILGRRVYFDTARNMMNSE--DSHVPLSMS 190
Query: 176 DEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST 235
+ KF++ A +L + +L++D E VL+GKQLK+ T L++ M+I S
Sbjct: 191 VQHKFIAFAGYLHHKGLATLVADTYKVVEIVLRGKQLKEPYTIDELRDVFMKIRASLDSR 250
Query: 236 GSPHHWVDYLMMPQDT--------------KLSRTTSDSSDEAVSKFHQLMVETREVLIS 281
SP WV Y++ P++ S + D+ ++ QLM ETR V+ S
Sbjct: 251 RSP--WVQYVLPPENVLPDEFVATSSAADAAASVSDMTHEDDVLA---QLMNETRAVVSS 305
Query: 282 TEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
EF ++ + L D ++EE+ T G PLA++LP + + + P +NRF
Sbjct: 306 DEFNEVLAVCLDAILDGVMEELYT-IYRGSPDNSIPLARMLPPVAGAGSTLLEHPDENRF 364
Query: 342 LQIIRDLPEVKLFFTLLYAN 361
+ I+ +LP+V F L+Y N
Sbjct: 365 ISILANLPQVHAFCALVYTN 384
>ref|XP_001755103.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ80047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 121/345 (35%), Positives = 191/345 (55%), Gaps = 25/345 (7%)
Query: 34 SHTRRLADLERELAHERENDEIIKTQMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDV 93
S R+ D+ R +RE +E + Q+++HFESIQ I D+TTLP + L R+ ++D+
Sbjct: 48 SQARKERDVARAALLQREAEERAEAQLQSHFESIQRISDTTTLPSMLPQLKDRLFSKVDL 107
Query: 94 SHVMDRLNQGK---GMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGR 150
S + ++L GK LS EK+QLW ELK LSF R V ++ ++++L L+IR+Q+NILGR
Sbjct: 108 SGLTEKLILGKEDPQSLSQREKMQLWQELKTLSFVRTVCAMSALSLLDLFIRIQLNILGR 167
Query: 151 HLYVDTARALGS---SHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVL 207
H+Y DTAR + SH+ + + + KF++ A +L + +L+ D+ +AE VL
Sbjct: 168 HVYFDTARDFMNPEDSHVPLSMSV-----QHKFIAYAGYLHHKGLDALVGDVNQAAEIVL 222
Query: 208 KGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQDT---KLSRTTSDSSDEA 264
+ K LK+ T L++ M+I S S WV Y++ P + LS +S +
Sbjct: 223 RSKPLKEPYTLDDLRDVFMRIRATLDSKRSA--WVQYVLPPDNVLPDDLSVASSADASNP 280
Query: 265 VSK--------FHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGK 316
V++ QLM ETR VL+S EF ++ + + D ++EE+ G G
Sbjct: 281 VAEMALNDNEVLDQLMNETRAVLVSNEFHEVMAVCVDSMLDGVMEELYA-IYRGSSDNGI 339
Query: 317 PLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYAN 361
PLAK+LP + + + NRF++I+ DLP+V F L+Y N
Sbjct: 340 PLAKLLPPVAGAGSALLESLDDNRFIRILADLPQVHAFCALVYTN 384
>emb|CAO68151.1| unnamed protein product [Vitis vinifera]
Length = 170
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 85/160 (53%), Positives = 112/160 (70%), Gaps = 7/160 (4%)
Query: 210 KQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTK----LSRTTSDSSDEA- 264
KQL+DV + VL T+MQI+D+F+STG PH+ VDYLM P DTK S + DSS A
Sbjct: 10 KQLRDVFNSMVLHGTIMQILDLFISTGKPHNLVDYLM-PDDTKSYKPASPSNGDSSTPAD 68
Query: 265 VSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEME-TQTEAGGLATGKPLAKVLP 323
V+KF QLMVETR VL S EF N++++SL+ D +VE+M Q G ++G LAK+LP
Sbjct: 69 VTKFDQLMVETRAVLSSAEFINVIDVSLRTVVDAVVEDMMGVQLGGGSPSSGMVLAKLLP 128
Query: 324 QIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYANMP 363
++ + ++ EPSKNRF+QII+ PEV+ FFTLLYANMP
Sbjct: 129 RVAQMGPLLLEEPSKNRFIQIIQKAPEVEFFFTLLYANMP 168
>ref|XP_780894.2| PREDICTED: similar to peroxisomal biogenesis factor 3
[Strongylocentrotus purpuratus]
Length = 388
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 98/379 (25%), Positives = 181/379 (47%), Gaps = 42/379 (11%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH-FE 65
F ++HRRK LV G LLYK A+ + + E E E + +AH FE
Sbjct: 8 FVKRHRRKFLVLGAVAGGASLLYKY--------AEWKLKEWRETEEAECLAMARRAHHFE 59
Query: 66 SIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKIL 122
S Q + T L P + L ++ E ++ +L G K+ +W+ELK++
Sbjct: 60 SNQRTCNMTVLSMIPKLRELLLYHLNSE----ELIQKLKSGT-----ENKVVVWNELKVV 110
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
SFTRMV+S++S +L+ ++RVQ+NILG ++Y+DT G + L +D ++++L+
Sbjct: 111 SFTRMVVSVYSTVLLTAFLRVQLNILGGYMYLDTLA--GKNGLTYYQVHATQDVQKEYLA 168
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIV----------DVF 232
+L+T+ + LI+ +Q + V+ L+ +++ ++E + ++ +V
Sbjct: 169 MVQYLLTDGLTELINHVQEVVQNVVGSISLQQLLSLSDMEEIIAKVRGQVETTQYGGEVV 228
Query: 233 MSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
+ S H YL+ P+ + SD+ + Q+ +ETR+++ S +F+ ++ L
Sbjct: 229 VPDCSIHPLGRYLLKPEGLDGEESACRLSDDQLV-LSQMQIETRDLVESHDFSCVMNSCL 287
Query: 293 KCFTDVLVEEME-----TQTEAGGLATGKPL--AKVLPQIEKTMNVITAEPSKNRFLQII 345
L++ M T G G L AK +P + +N + + + N F+Q +
Sbjct: 288 DIGFSRLLDNMAEFFRPVTTRNGESPCGLKLAMAKAIPIVNGQVNALCCD-TPNHFIQEL 346
Query: 346 RDLPEVKLFFTLLYANMPQ 364
+ VK F + +Y Q
Sbjct: 347 LLMQCVKDFASNVYEGFSQ 365
>ref|XP_001176855.1| PREDICTED: similar to peroxisomal biogenesis factor 3
[Strongylocentrotus purpuratus]
Length = 388
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 98/379 (25%), Positives = 181/379 (47%), Gaps = 42/379 (11%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH-FE 65
F ++HRRK LV G LLYK A+ + + E E E + +AH FE
Sbjct: 8 FVKRHRRKFLVLGAVAGGASLLYKY--------AEWKLKEWRETEEAECLAMARRAHHFE 59
Query: 66 SIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKIL 122
S Q + T L P + L ++ E ++ +L G K+ +W+ELK++
Sbjct: 60 SNQRTCNMTVLSMIPKLRELLLYHLNSE----ELIQKLKSGT-----ENKVVVWNELKVV 110
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
SFTRMV+S++S +L+ ++RVQ+NILG ++Y+DT G + L +D ++++L+
Sbjct: 111 SFTRMVVSVYSTVLLTAFLRVQLNILGGYMYLDTLA--GKNGLTYYQVHATQDVQKEYLA 168
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIV----------DVF 232
+L+T+ + LI+ +Q + V+ L+ +++ ++E + ++ +V
Sbjct: 169 MVQYLLTDGLTELINHVQEVVQNVVGSISLQQLLSLSDMEEIIAKVRGQVETTQYGGEVV 228
Query: 233 MSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
+ S H YL+ P+ + SD+ + Q+ +ETR+++ S +F+ ++ L
Sbjct: 229 VPDCSIHPLGRYLLKPEGLDGEESACRLSDDQLV-LSQMQIETRDLVESHDFSCVMNSCL 287
Query: 293 KCFTDVLVEEME-----TQTEAGGLATGKPL--AKVLPQIEKTMNVITAEPSKNRFLQII 345
L++ M T G G L AK +P + +N + + + N F+Q +
Sbjct: 288 DIGFSRLLDNMAEFFRPVTTRNGESPCGLKLAMAKAIPIVNGQVNALCCD-TPNHFIQEL 346
Query: 346 RDLPEVKLFFTLLYANMPQ 364
+ VK F + +Y Q
Sbjct: 347 LLMQCVKDFASNVYEGFSQ 365
>ref|XP_419708.1| PREDICTED: similar to peroxisomal biogenesis factor 3 [Gallus
gallus]
Length = 369
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 100/372 (26%), Positives = 183/372 (49%), Gaps = 40/372 (10%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K LV LG YLL K R + ERE A + I + + + HFES
Sbjct: 8 FLKRHKKKCLVLGTFLGGVYLLGKYGQKKIREIQ--EREAA-----EYIAQARRQYHFES 60
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P L +++ E S + +R P KL++W++LKI+S
Sbjct: 61 NQRTCNMTVLSMLPTLRDALMHQLNSESLTSLLKNR---------PANKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A + L + +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVCKNG----TTPLAPPEVQQQYLSS 167
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGS----PH 239
L+ + + LI+ ++ + +V LK ++ L++ + +I DV S P+
Sbjct: 168 IQHLLGDGLTELITIVKQAVHKVFGSISLKHALSLLELEQKLKEIRDVVEHRDSDQVAPY 227
Query: 240 HWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL-KCFTDV 298
+ + +MP + T + E + +L+ ETR++L S +F+ ++ L + F+ +
Sbjct: 228 SPLCHYLMPDEENPLATQACGLTERDTATIKLLNETRDMLESPDFSTVLSTCLNRGFSQL 287
Query: 299 L--VEEMETQTEAGGLATG---------KPLAKVLPQIEKTMNVITAEPSKNRFLQIIRD 347
L + E TE G PLAK++P I ++ I +E + + F+Q +
Sbjct: 288 LDNMAEFFRPTEQDFSQNGSVNSLSSVSLPLAKIIPIINGQIHSICSE-TPSHFVQDLLM 346
Query: 348 LPEVKLFFTLLY 359
+ ++K F +Y
Sbjct: 347 MEQMKDFAANVY 358
>ref|NP_001092457.1| peroxisomal biogenesis factor 3 [Bos taurus]
gb|AAI46193.1| MGC166343 protein [Bos taurus]
Length = 373
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 98/377 (25%), Positives = 186/377 (49%), Gaps = 46/377 (12%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + LG Y+L K R + ERE A + I + + + HFES
Sbjct: 8 FLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYHFES 60
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E + + R P KL++W++LKI+S
Sbjct: 61 NQRTCNMTVLSMLPTLREALMQQLNSESLTALLKTR---------PSNKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTVLAPPDVQQQYLSS 167
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDV---------FMS 234
L+ + + LI+ ++ + +++L LK ++ L++ + +I D+ +
Sbjct: 168 IQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRDLVEQHKSSSWINN 227
Query: 235 TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKC 294
GS Y+M ++T L+ S V+ +L+ ETR++L S +F+ ++ L
Sbjct: 228 DGSKSLLCHYMMPDEETPLAVQACGLSPRDVTTI-KLLNETRDMLESPDFSTVLNTCLSR 286
Query: 295 FTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRFL 342
L++ M E + G + PLAK++P I ++ + +E + + F+
Sbjct: 287 GFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIINGQIHSVCSE-TPSHFV 345
Query: 343 QIIRDLPEVKLFFTLLY 359
Q + + +VK F +Y
Sbjct: 346 QDLLMMEQVKDFAANVY 362
>ref|XP_518776.1| PREDICTED: peroxisomal biogenesis factor 3 isoform 2 [Pan
troglodytes]
Length = 373
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 96/381 (25%), Positives = 189/381 (49%), Gaps = 48/381 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + ERE A + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++ S
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS-S 223
Query: 241 WVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEI 290
W++ Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 224 WINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNT 282
Query: 291 SLKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSK 338
L L++ M E + G + PLAK++P + ++ + +E +
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 341
Query: 339 NRFLQIIRDLPEVKLFFTLLY 359
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLTMEQVKDFAANVY 362
>ref|XP_001091411.1| PREDICTED: peroxisomal biogenesis factor 3 [Macaca mulatta]
sp|Q60HE1|PEX3_MACFA Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
dbj|BAD51974.1| peroxisomal biogenesis factor 3 [Macaca fascicularis]
Length = 373
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 96/381 (25%), Positives = 189/381 (49%), Gaps = 48/381 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + ERE A + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++ S
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS-S 223
Query: 241 WVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEI 290
W++ Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 224 WINKDGSKSLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNT 282
Query: 291 SLKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSK 338
L L++ M E + G + PLAK++P + ++ + +E +
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 341
Query: 339 NRFLQIIRDLPEVKLFFTLLY 359
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLTMEQVKDFAANVY 362
>ref|NP_003621.1| peroxisomal biogenesis factor 3 [Homo sapiens]
sp|P56589|PEX3_HUMAN Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
emb|CAA04879.1| Pex3 protein [Homo sapiens]
emb|CAA10362.1| PEX3 protein [Homo sapiens]
emb|CAA08904.1| Pex3p [Homo sapiens]
emb|CAB53744.1| peroxisomal biogenesis factor 3 [Homo sapiens]
dbj|BAA97993.1| Pex3p [Homo sapiens]
gb|AAH14551.1| Peroxisomal biogenesis factor 3 [Homo sapiens]
gb|AAH15506.1| Peroxisomal biogenesis factor 3 [Homo sapiens]
gb|AAQ18039.1| transformation-related protein 18 [Homo sapiens]
emb|CAG46859.1| PEX3 [Homo sapiens]
gb|EAW47866.1| peroxisomal biogenesis factor 3 [Homo sapiens]
Length = 373
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 97/381 (25%), Positives = 188/381 (49%), Gaps = 48/381 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + ERE A + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR ++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++
Sbjct: 109 IISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSS L+ + + LI+ ++ + ++VL LK ++ L++ + +I ++ S
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS-S 223
Query: 241 WVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEI 290
W++ Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 224 WINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNT 282
Query: 291 SLKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSK 338
L L++ M E + G + PLAK++P + ++ + +E +
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 341
Query: 339 NRFLQIIRDLPEVKLFFTLLY 359
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLTMEQVKDFAANVY 362
>gb|AAX37078.1| peroxisomal biogenesis factor 3 [synthetic construct]
Length = 374
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 97/381 (25%), Positives = 188/381 (49%), Gaps = 48/381 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + ERE A + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR ++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++
Sbjct: 109 IISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSS L+ + + LI+ ++ + ++VL LK ++ L++ + +I ++ S
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS-S 223
Query: 241 WVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEI 290
W++ Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 224 WINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNT 282
Query: 291 SLKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSK 338
L L++ M E + G + PLAK++P + ++ + +E +
Sbjct: 283 CLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 341
Query: 339 NRFLQIIRDLPEVKLFFTLLY 359
+ F+Q + + +VK F +Y
Sbjct: 342 SHFVQDLLTMEQVKDFAANVY 362
>ref|NP_956522.1| peroxisomal biogenesis factor 3 [Danio rerio]
gb|AAH46066.1| Peroxisomal biogenesis factor 3 [Danio rerio]
Length = 364
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 99/368 (26%), Positives = 180/368 (48%), Gaps = 37/368 (10%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEII-KTQMKAHFE 65
F ++H+RK + T +G YLL K R++ +++ ERE E I + + + HFE
Sbjct: 8 FIKRHKRKFIFTGVFVGGVYLLGKYAQ---RKIQEMQ-----EREAAEYIAQARRQFHFE 59
Query: 66 SIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILSFT 125
S Q + T L + L I ++ + L P KL++W++LKI+SFT
Sbjct: 60 SNQRTCNMTVLS-MLPTLREAIIHHLNSESLTTLLKT-----KPANKLEIWEDLKIISFT 113
Query: 126 RMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSSAD 185
R +++++S ML + +RVQ+NI+G +LY+D + L D+ +Q++LSS
Sbjct: 114 RSIVAVYSTCMLVVLLRVQLNIIGGYLYLDNSVTKNGMTPLAPPDV-----QQQYLSSIQ 168
Query: 186 FLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYL 245
L+ + LI+ ++ + +EV LK ++ + L++ + QI + S + + +
Sbjct: 169 HLLGEGLMELITVVKKAVQEVFGLVSLKQSLSLQELEQQLTQIRQLVEDDSSKYKGLSWY 228
Query: 246 MMP-QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK----CFTDVLV 300
MMP ++ L+ ++ V+ +L+ ETR++L S +F ++ L F D +
Sbjct: 229 MMPDEENTLASQACGLTENDVTTI-KLLNETRDMLESPDFNIVLHTCLNRGFVRFLDNMA 287
Query: 301 E--------EMETQTEAGGLATGKPLAKVLPQIEKTMNVITAE-PSKNRFLQIIRDLPEV 351
E + T PLAK++P I ++ I +E PS F+Q + + +V
Sbjct: 288 EFFRPPQRDSTPSSTPDQLSHVSLPLAKIIPIINGQIHSICSEIPS--HFVQDLLLIDQV 345
Query: 352 KLFFTLLY 359
K F +Y
Sbjct: 346 KEFAANVY 353
>ref|XP_001331521.1| PREDICTED: hypothetical protein [Danio rerio]
emb|CAI11651.1| novel protein similar to vertebrate peroxisomal biogenesis factor 3
(PEX3) (zgc:56313) [Danio rerio]
Length = 364
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 99/368 (26%), Positives = 180/368 (48%), Gaps = 37/368 (10%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEII-KTQMKAHFE 65
F ++H+RK + T +G YLL K R++ +++ ERE E I + + + HFE
Sbjct: 8 FIKRHKRKFIFTGVFVGGVYLLGKYAQ---RKIQEMQ-----EREAAEYIAQARRQFHFE 59
Query: 66 SIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILSFT 125
S Q + T L ++R E + H+ P KL++W++LKI+SFT
Sbjct: 60 SNQRTCNMTVLS---MLPTLR---EAIIHHLNSESLTALLKTKPANKLEIWEDLKIISFT 113
Query: 126 RMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSSAD 185
R +++++S ML + +RVQ+NI+G +LY+D + L D+ +Q++LSS
Sbjct: 114 RSIVAVYSTCMLVVLLRVQLNIIGGYLYLDNSVTKNGMTPLAPPDV-----QQQYLSSIQ 168
Query: 186 FLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYL 245
L+ + LI+ ++ + +EV LK ++ + L++ + QI + S + + +
Sbjct: 169 HLLGEGLMELITVVKKAVQEVFGLVSLKQSLSLQELEQQLTQIRQLVEDDSSKYKSLSWY 228
Query: 246 MMP-QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK----CFTDVLV 300
MMP ++ L+ ++ V+ +L+ ETR++L S +F ++ L F D +
Sbjct: 229 MMPDEENTLASQACGLTENDVTTI-KLLNETRDMLESPDFNIVLHTCLNRGFVRFLDNMA 287
Query: 301 E--------EMETQTEAGGLATGKPLAKVLPQIEKTMNVITAE-PSKNRFLQIIRDLPEV 351
E + T PLAK++P I ++ I +E PS F+Q + + +V
Sbjct: 288 EFFRPPQRDSTPSSTPDQLSHVSLPLAKIIPIINGQIHSICSEIPS--HFVQDLLLIDQV 345
Query: 352 KLFFTLLY 359
K F +Y
Sbjct: 346 KEFAANVY 353
>sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
dbj|BAA97994.1| Pex3p [Cricetulus longicaudatus]
Length = 373
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 93/378 (24%), Positives = 185/378 (48%), Gaps = 48/378 (12%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + LG Y+L K R + ERE A + I + + + HFES
Sbjct: 8 FLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYHFES 60
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E + + +R P KL++W++LKI+S
Sbjct: 61 NQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A + + L D +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNGTTV----LAPPDVQQQYLSS 167
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVD 243
L+ + + L++ ++ + + +L LK ++ L++ + +I + SP W+D
Sbjct: 168 IQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHRSP-SWID 226
Query: 244 ----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK 293
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 227 KDVSKSSLCQYMMPDEETPLAAQAYGLSPRDITTI-KLLNETRDMLESPDFSTVLNTCLN 285
Query: 294 CFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
L++ M E + G + PLAK++P + ++ + ++ + + F
Sbjct: 286 RGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSD-TPSHF 344
Query: 342 LQIIRDLPEVKLFFTLLY 359
+Q + + +VK F +Y
Sbjct: 345 VQDLLMMEQVKDFAANVY 362
>ref|XP_001507262.1| PREDICTED: similar to peroxisomal biogenesis factor 3
[Ornithorhynchus anatinus]
Length = 360
Score = 98.2 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 89/338 (26%), Positives = 172/338 (50%), Gaps = 42/338 (12%)
Query: 48 HERENDE-IIKTQMKAHFESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQG 103
ERE E I + + + HFES Q + T L P L +++ E + + R
Sbjct: 28 QEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPALRDALMQQLNSESLTALLKSR---- 83
Query: 104 KGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSS 163
P KL++WD+LKI+SFTR +++++S ML + +RVQ+NI+G ++Y+D A +
Sbjct: 84 -----PSNKLEIWDDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG 138
Query: 164 HLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQE 223
+L L D +Q++LSS L+ + + LI+ ++ + +++L LK ++ L++
Sbjct: 139 TML----LAPPDVQQQYLSSIHHLLGDGLTELITVVKQAVQKILGSVSLKHSMSLLDLEQ 194
Query: 224 TVMQIVDVFMSTGSPHHWVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMV 273
V +I + P WVD Y+M ++T L+ + V+ +L+
Sbjct: 195 KVKEIRKI-TEEQKPPSWVDTTGPRSLLCHYMMPDEETPLATQACGLTAGDVTTI-KLLN 252
Query: 274 ETREVLISTEFTNIVEISL-KCFTDVL----------VEEMETQTEAGGLAT-GKPLAKV 321
ETR++L S +F+ ++ L + F+ +L ++++ + L++ PLAK+
Sbjct: 253 ETRDMLESPDFSTVLNTCLNRGFSRLLDNMAEFFRPTEQDLQRKDSMNSLSSVSLPLAKI 312
Query: 322 LPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLY 359
+P I ++ + +E + + F+Q + + +VK F +Y
Sbjct: 313 IPIINGQVHAVCSE-TPSHFVQDLLMMEQVKDFAANVY 349
>ref|XP_001370565.1| PREDICTED: similar to peroxisomal biogenesis factor 3 [Monodelphis
domestica]
Length = 373
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 91/378 (24%), Positives = 185/378 (48%), Gaps = 42/378 (11%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K L LG Y+L K R + E+E A + I + + + H
Sbjct: 5 VWNFLKRHKKKCLFLGTFLGGVYILGKYGQKKIREIQ--EKEAA-----EYIAQARRQYH 57
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
FES Q + T L + L + ++++ ++ L P KL++W++LKI+S
Sbjct: 58 FESNQRTCNMTVLS-MLPTLRDALMQQLNSENLTALLKN-----RPSNKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A + L L + +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTL----LAPPEVQQRYLSS 167
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVD 243
L+ + + LI+ ++ + +++L LK ++ L++ + +I + S W+D
Sbjct: 168 IQHLLGDGLTELITVVKQAVQKILGSVSLKHSLSLLELEQKLKEIRKISEQHTSS-SWID 226
Query: 244 ----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK 293
Y+M ++T L+ ++ ++ +L+ ETR++L S +F+ ++ L
Sbjct: 227 KTGPKSLLCQYMMPDEETPLAIQACGLTEGDITTI-KLLNETRDMLESPDFSTVLNTCLN 285
Query: 294 CFTDVLVEEM------------ETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
L++ M + + + PLAK++P I ++ + +E + + F
Sbjct: 286 RGFSRLLDNMAEFFRPTEQDLNHSDSMNSLSSVSLPLAKIIPIINGQIHSVCSE-TPSHF 344
Query: 342 LQIIRDLPEVKLFFTLLY 359
+Q + + +VK F +Y
Sbjct: 345 VQDLLMMEQVKDFAANVY 362
>ref|XP_541132.2| PREDICTED: similar to Peroxisomal biogenesis factor 3 (Peroxin-3)
(Peroxisomal assembly protein PEX3) [Canis familiaris]
Length = 487
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 80/299 (26%), Positives = 154/299 (51%), Gaps = 35/299 (11%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + LG Y+L K R + ERE A + I + + + HFES
Sbjct: 122 FLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYHFES 174
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E + + +R P KL++W++LKI+S
Sbjct: 175 NQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLKIIS 225
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++LSS
Sbjct: 226 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTVLAPPDVQQQYLSS 281
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVD 243
L+ + + LI+ ++ + +++L LK ++ L++ + +I ++ S W++
Sbjct: 282 IQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS-SWIN 340
Query: 244 ----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
Y+M ++T L+ S V+ +L+ ETR++L S +F+ ++ L
Sbjct: 341 KDESKSLLCHYMMPDEETPLAVQACGLSPRDVTTI-KLLNETRDMLESPDFSTVLNTCL 398
>ref|NP_112640.1| peroxisomal biogenesis factor 3 [Rattus norvegicus]
sp|Q9JJK4|PEX3_RAT Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
dbj|BAA97992.1| Pex3p [Rattus norvegicus]
gb|AAH62046.1| Peroxisomal biogenesis factor 3 [Rattus norvegicus]
gb|EDL93733.1| peroxisomal biogenesis factor 3 [Rattus norvegicus]
Length = 372
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 91/376 (24%), Positives = 181/376 (48%), Gaps = 45/376 (11%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + LG Y+L K R + ERE A + I + + + HFES
Sbjct: 8 FLKRHKKKCIFLGTVLGGVYILGKYGQKKLREIQ--EREAA-----EYIAQARRQYHFES 60
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E + + +R P KL++W++LKI+S
Sbjct: 61 NQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A + + L D +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNGTSI----LAPPDVQQQYLSS 167
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS--------T 235
L+ + + L++ ++ + + +L LK ++ L++ + +I +
Sbjct: 168 IQHLLGDGLTELVTVIKQAVQRILGSISLKHSLSLLDLEQKLKEIRTLVEQHRSCWNDKD 227
Query: 236 GSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCF 295
S Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 228 ASKSSLCHYMMPDEETPLAAQAYGLSPRDITTI-KLLNETRDMLESPDFSTVLNTCLNRG 286
Query: 296 TDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRFLQ 343
L++ M E + G + PLAK++P + ++ + +E + + F+Q
Sbjct: 287 FSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSHFVQ 345
Query: 344 IIRDLPEVKLFFTLLY 359
+ + +VK F +Y
Sbjct: 346 DLLMMEQVKDFAANVY 361
>ref|XP_001497293.1| PREDICTED: similar to peroxisomal biogenesis factor 3 [Equus
caballus]
Length = 481
Score = 96.3 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 95/375 (25%), Positives = 181/375 (48%), Gaps = 63/375 (16%)
Query: 8 WRKHRRKVLVTAGC-------LGSG------YLLYKLYNSHTRRLADLERELAHERENDE 54
W+ R K L AGC +G G Y+L K R + ERE A +
Sbjct: 131 WKSRREKAL--AGCCAGALRIVGIGTAPARVYILGKYGQKKIREMQ--EREAA-----EY 181
Query: 55 IIKTQMKAHFESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPE 111
I + + + HFES Q + T L P + L +++ E + + +R P
Sbjct: 182 IAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSN 232
Query: 112 KLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDL 171
KL++W++LKI+SFTR +++++S ML + +RVQ+NI+G ++Y+D A A+G + L
Sbjct: 233 KLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTVL 288
Query: 172 IDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDV 231
D +Q++LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++
Sbjct: 289 APPDVQQQYLSSIQHLLGDGLTELITVIKQAVQKILGSISLKHSLSLLDLEQKLKEIRNL 348
Query: 232 FMSTGSPHHWVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLIS 281
S W++ Y+M ++T L+ S V+ +L+ ETR++L S
Sbjct: 349 VEQHKSS-SWINKDGSKSLLCHYMMPDEETPLAVQAYGLSPRDVTTI-KLLNETRDMLES 406
Query: 282 TEFTNIVEISLKCFTDVLVEEM-------ETQTEAGGLATGK-----PLAKVLPQIEKTM 329
+F+ ++ L L++ M + + G PLAK++P + +
Sbjct: 407 PDFSTVLSTCLNRGFSRLLDNMAEFFRPTDQDLQQGSSMDSLSSVSLPLAKIIPIVNGQI 466
Query: 330 NVITAEPSKNRFLQI 344
+ + +E + + F+Q+
Sbjct: 467 HSVCSE-TPSHFVQV 480
>gb|EDL03500.1| peroxisomal biogenesis factor 3, isoform CRA_b [Mus musculus]
Length = 372
Score = 95.9 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 93/376 (24%), Positives = 183/376 (48%), Gaps = 45/376 (11%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + LG Y+L K R + ERE A + I + + + HFES
Sbjct: 8 FLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYHFES 60
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E + + R P KL++W++LKI+S
Sbjct: 61 NQRTCNMTVLSMLPTLREALMQQLNSESLTALLKSR---------PSNKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A + + L D +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNGTTI----LAPPDVQQQYLSS 167
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQI---VDVFMSTG---- 236
L+ + + L++ ++ + + +L LK ++ L++ + +I V+ S+
Sbjct: 168 IQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWNDKD 227
Query: 237 -SPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCF 295
S Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 228 VSRSSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLLNETRDMLESPDFSTVLNTCLNRG 286
Query: 296 TDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRFLQ 343
L++ M E + G + PLAK++P + ++ + +E + + F+Q
Sbjct: 287 FSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSHFVQ 345
Query: 344 IIRDLPEVKLFFTLLY 359
+ + +VK F +Y
Sbjct: 346 DLLMMEQVKDFAANVY 361
>ref|NP_064345.1| peroxisomal biogenesis factor 3 [Mus musculus]
sp|Q9QXY9|PEX3_MOUSE Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
gb|AAF14524.1|AF152996_1 peroxisomal assembly protein PEX3 [Mus musculus]
gb|AAG24507.1| peroxisomal assembly protein PEX3P [Mus musculus]
gb|AAH37606.1| Peroxisomal biogenesis factor 3 [Mus musculus]
gb|AAH33415.1| Peroxisomal biogenesis factor 3 [Mus musculus]
dbj|BAE27544.1| unnamed protein product [Mus musculus]
Length = 372
Score = 95.5 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 93/376 (24%), Positives = 183/376 (48%), Gaps = 45/376 (11%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + LG Y+L K R + ERE A + I + + + HFES
Sbjct: 8 FLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYHFES 60
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E + + R P KL++W++LKI+S
Sbjct: 61 NQRTCNMTVLSMLPTLREALMQQLNSESLTALLKSR---------PSNKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A + + L D +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNGTTV----LAPPDVQQQYLSS 167
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQI---VDVFMSTG---- 236
L+ + + L++ ++ + + +L LK ++ L++ + +I V+ S+
Sbjct: 168 IQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWNDKD 227
Query: 237 -SPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCF 295
S Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 228 VSRSSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLLNETRDMLESPDFSTVLNTCLNRG 286
Query: 296 TDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRFLQ 343
L++ M E + G + PLAK++P + ++ + +E + + F+Q
Sbjct: 287 FSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSHFVQ 345
Query: 344 IIRDLPEVKLFFTLLY 359
+ + +VK F +Y
Sbjct: 346 DLLMMEQVKDFAANVY 361
>dbj|BAC35986.1| unnamed protein product [Mus musculus]
Length = 372
Score = 95.5 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 93/376 (24%), Positives = 183/376 (48%), Gaps = 45/376 (11%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + LG Y+L K R + ERE A + I + + + HFES
Sbjct: 8 FLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYHFES 60
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E + + R P KL++W++LKI+S
Sbjct: 61 NQRTCNMTVLSMLPTLREALMQQLNSESLTALLKSR---------PSSKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A + + L D +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNGTTV----LAPPDVQQQYLSS 167
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQI---VDVFMSTG---- 236
L+ + + L++ ++ + + +L LK ++ L++ + +I V+ S+
Sbjct: 168 IQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWNDKD 227
Query: 237 -SPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCF 295
S Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 228 VSRSSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLLNETRDMLESPDFSTVLNTCLNRG 286
Query: 296 TDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRFLQ 343
L++ M E + G + PLAK++P + ++ + +E + + F+Q
Sbjct: 287 FSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSHFVQ 345
Query: 344 IIRDLPEVKLFFTLLY 359
+ + +VK F +Y
Sbjct: 346 DLLMMEQVKDFAANVY 361
>ref|NP_001085641.1| MGC82731 protein [Xenopus laevis]
gb|AAH73069.1| MGC82731 protein [Xenopus laevis]
Length = 372
Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 98/377 (25%), Positives = 184/377 (48%), Gaps = 46/377 (12%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + GS YLL K R + ERE A + I + + + HFES
Sbjct: 7 FLKRHKKKFIFVGAFAGSVYLLGKYAQRKIREIQ--EREAA-----EYIAQARRQYHFES 59
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E S + ++ P KL +W++LKI+S
Sbjct: 60 NQRTCNMTVLSMLPALREALMQQLNSESLTSLLKNK---------PSNKLDIWEDLKIIS 110
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
F+R +++++S ML + +RVQ+NI+G ++Y+D + + L+ + +Q++LSS
Sbjct: 111 FSRSIVAIYSTCMLVVLLRVQLNIIGGYIYLDNSSVTKNGTALQASPEV----QQQYLSS 166
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVD-VFMSTGSPH--- 239
L+ + + LI+ ++ + +EVL LK + L++ + +I V GS +
Sbjct: 167 IQHLLGDGLTELITVVKQAVQEVLGSFSLKHSFSLIELEQKIKEIRSLVEKKRGSLNGEE 226
Query: 240 -----HWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL-K 293
YLM ++ L+ +++ V K +L+ ETR++L S +F ++ L +
Sbjct: 227 SDGKVRLCQYLMSDEENPLTTQAYGLTEKDV-KTIRLLNETRDMLESEDFNTVLNSCLSR 285
Query: 294 CFTDVL----------VEEMETQTEAGGLAT-GKPLAKVLPQIEKTMNVITAEPSKNRFL 342
F +L +E++ L++ PLAK++P I ++ I +E N F+
Sbjct: 286 GFGRLLDSTAEFFRPADQELKQHNTMHSLSSISLPLAKIIPIINGQIHSICSE-LPNHFV 344
Query: 343 QIIRDLPEVKLFFTLLY 359
Q + + +VK F +Y
Sbjct: 345 QDLLLMEQVKDFAANVY 361
>ref|NP_001039031.1| peroxisomal biogenesis factor 3 [Xenopus tropicalis]
emb|CAJ83967.1| peroxisomal biogenesis factor 3 [Xenopus tropicalis]
gb|AAI54856.1| Peroxisomal biogenesis factor 3 [Xenopus tropicalis]
Length = 369
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 95/374 (25%), Positives = 178/374 (47%), Gaps = 43/374 (11%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + G YLL K R + ERE A + I + + + HFES
Sbjct: 7 FLKRHKKKFIFVGAVAGGVYLLGKYAQRKIREIQ--EREAA-----EYIAQARRQYHFES 59
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E S + ++ P KL++W++LKI+S
Sbjct: 60 NQRTCNMTVLSMLPALREGLMQQLNSESLTSLLKNK---------PSNKLEIWEDLKIIS 110
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
F+R +++++S ML + +RVQ+NI+G ++Y+D + + L+ + +Q++LSS
Sbjct: 111 FSRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNSSLTKNGTTLQASPEV----QQQYLSS 166
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF---------MS 234
L+ + + LI+ ++ + + VL LK + L++ + +I +
Sbjct: 167 IQHLLGDGLSELITVVKQAVQGVLGSFSLKHCFSLTELEQKIKEIRSLVEKKKGSLNGEE 226
Query: 235 TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL-K 293
+ S YLM ++ L+ +++ V +L+ ETR++L S +F ++ L +
Sbjct: 227 SDSKSKLCQYLMPDEENPLTTQAYGLTEKDVLTI-RLLNETRDMLESEDFKTVLNSCLSR 285
Query: 294 CFTDVLVEEME----TQTEAGGLAT----GKPLAKVLPQIEKTMNVITAEPSKNRFLQII 345
F +L E T E T PLAK++P I ++ I +E N F+Q +
Sbjct: 286 GFGRLLDSTAEFFRPTDREMNQDNTLHSISLPLAKIIPIINGQIHSICSE-MPNHFVQDL 344
Query: 346 RDLPEVKLFFTLLY 359
+ +VK F +Y
Sbjct: 345 LLMEQVKNFAANVY 358
>gb|EDL03499.1| peroxisomal biogenesis factor 3, isoform CRA_a [Mus musculus]
Length = 365
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 82/339 (24%), Positives = 166/339 (48%), Gaps = 38/339 (11%)
Query: 44 RELAHERENDEIIKTQMKAHFESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRL 100
RE+ + I + + + HFES Q + T L P + L +++ E + + R
Sbjct: 31 REIQEREAAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKSR- 89
Query: 101 NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL 160
P KL++W++LKI+SFTR +++++S ML + +RVQ+NI+G ++Y+D A
Sbjct: 90 --------PSNKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVG 141
Query: 161 GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV 220
+ + L D +Q++LSS L+ + + L++ ++ + + +L LK ++
Sbjct: 142 KNGTTI----LAPPDVQQQYLSSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLD 197
Query: 221 LQETVMQI---VDVFMSTG-----SPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLM 272
L++ + +I V+ S+ S Y+M ++T L+ S ++ +L+
Sbjct: 198 LEQKLKEIRILVEQHQSSWNDKDVSRSSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLL 256
Query: 273 VETREVLISTEFTNIVEISLKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAK 320
ETR++L S +F+ ++ L L++ M E + G + PLAK
Sbjct: 257 NETRDMLESPDFSTVLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAK 316
Query: 321 VLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLY 359
++P + ++ + +E + + F+Q + + +VK F +Y
Sbjct: 317 IIPIVNGQIHSVCSE-TPSHFVQDLLMMEQVKDFAANVY 354
>ref|XP_001635320.1| predicted protein [Nematostella vectensis]
gb|EDO43257.1| predicted protein [Nematostella vectensis]
Length = 380
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 88/369 (23%), Positives = 171/369 (46%), Gaps = 46/369 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
++GF+R+H+RK +V + Y++ + + R D E +E + I + + + H
Sbjct: 5 IKGFFRRHKRKFVVGGIVITGIYIVSR----YARWRLD---EWRANQELEYIAQARKQHH 57
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
FES Q S TL + L + ++++ + +L + P KL+LW+ LK LS
Sbjct: 58 FESNQRTC-SVTLYSLIPSLRDSLLDKLNTEEITAKLRE-----KPANKLELWESLKTLS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
F R V +++S ML +++RVQ+N++G ++Y+D+ + + ++K+L+
Sbjct: 112 FARTVTAVYSSCMLFVFLRVQLNVIGGYMYLDSLVTPVEGGSNGKRKHVAEGMQKKYLAL 171
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF----------- 232
+L++ + + ++ S E++L LKD +T LQ + I F
Sbjct: 172 VKYLLSEGLDKMTDTIKRSTEDILSDISLKDKLTHAELQRLINHIRQTFEFSQQTSSSMR 231
Query: 233 --------MSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAV--SKFHQLMVETREVLIST 282
+S+ P M+P+D +++ V +F +L+ ET +VL S
Sbjct: 232 SSQTGSTPLSSTRPFC---QFMVPEDMAALDGRGETAVGGVEGEEFMRLVEETLDVLESE 288
Query: 283 EFTNIVEISLK-CFTDVL--VEEMETQTEAGG-----LATGKPLAKVLPQIEKTMNVITA 334
+ + +++ L F +L + E G LA PLAK++P + + + +
Sbjct: 289 DCSAVLQGCLDVAFAHILGNIAPFFQAEELGMSFKYLLAVSLPLAKIIPIVNGQIYHMFS 348
Query: 335 EPSKNRFLQ 343
+ S N +LQ
Sbjct: 349 D-SDNSYLQ 356
>ref|XP_001863328.1| peroxisomal biogenesis factor 3 [Culex pipiens quinquefasciatus]
gb|EDS38398.1| peroxisomal biogenesis factor 3 [Culex pipiens quinquefasciatus]
Length = 382
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 83/336 (24%), Positives = 159/336 (47%), Gaps = 42/336 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEII-KTQMKA 62
V+ F+ +HRRK +VT LGSG L K+ R ER+ EI + +
Sbjct: 5 VKNFFTRHRRKFVVTGIVLGSGVFLIKIIQYKLREF--------QERQAKEIAERFKRMQ 56
Query: 63 HFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKIL 122
H+ES + + T + A +S + + + + ++++L +P KL+LW+ELKIL
Sbjct: 57 HYESTERTCNQTIVGLAPT-VSEKALKNLGTAEILEKLRS-----NPDNKLELWEELKIL 110
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
+F R+V +++ +ML++ ++ Q+N+LG +LY DT ++ + D + +LS
Sbjct: 111 AFARIVTLVYASSMLAVTLKTQINLLGGYLYKDTVE--------QDDKQVTVDIQTTYLS 162
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST--GSPHH 240
+ + + L+ ++ + V++ LK +T ET+ + V +S+ SP
Sbjct: 163 MIQHFMGDGLDELMDTIRKNVTTVMQRYSLKQQLTL-ADAETLFWSIQVALSSEDNSPTK 221
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
+ +P++ S S D ET +VL S E +++ ++ ++V
Sbjct: 222 CIASYTLPKEINRSDLLSKMYD-----------ETLDVLESAEVSDVCLSNISNGFSLIV 270
Query: 301 EEM-ETQTEAGGLATGKPLAKVLPQIEKTMNVITAE 335
+++ E EA AT + A + +NV+ A+
Sbjct: 271 DKLAEYYAEAEPAATQQNGAST----KAALNVVAAD 302
>ref|XP_001172297.1| PREDICTED: similar to Pex3 protein isoform 1 [Pan troglodytes]
Length = 329
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 144/273 (52%), Gaps = 29/273 (10%)
Query: 109 PPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEE 168
P KL++W++LKI+SFTR +++++S ML + +RVQ+NI+G ++Y+D A A+G +
Sbjct: 53 PSNKLEIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---T 108
Query: 169 VDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQI 228
L D +Q++LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I
Sbjct: 109 TILAPPDVQQQYLSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEI 168
Query: 229 VDVFMSTGSPHHWVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREV 278
++ S W++ Y+M ++T L+ S ++ +L+ ETR++
Sbjct: 169 RNLVEQHKSS-SWINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDM 226
Query: 279 LISTEFTNIVEISLKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIE 326
L S +F+ ++ L L++ M E + G + PLAK++P +
Sbjct: 227 LESPDFSTVLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVN 286
Query: 327 KTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLY 359
++ + +E + + F+Q + + +VK F +Y
Sbjct: 287 GQIHSVCSE-TPSHFVQDLLTMEQVKDFAANVY 318
>ref|NP_001040264.1| peroxisomal biogenesis factor 3 [Bombyx mori]
gb|ABD36331.1| peroxisomal biogenesis factor 3 [Bombyx mori]
Length = 370
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 90/363 (24%), Positives = 168/363 (46%), Gaps = 52/363 (14%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIK-TQMKA 62
++ F +HRRK LVT +G LY L + ++L D E+E + + T+ K
Sbjct: 5 IKNFLNRHRRKFLVTGAVVGG---LYVLTSYAQKKLRD-----GQEKEAKKFFEMTRKKQ 56
Query: 63 HFESIQMIVDSTTLPHAMQFLSIRISEEI----DVSHVMDRLNQGKGMLSPPEKLQLWDE 118
HFE + + T L LS +SE I + ++ +L + +P +K LW++
Sbjct: 57 HFEGTERTCNQTILS-----LSKMVSESIWSWLNTEEIVQKLQE-----NPEDKWALWEQ 106
Query: 119 LKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQ 178
LKI FTR+ + ++ + ML + +RVQ+N++G +LY D+ + E ++D + +
Sbjct: 107 LKITIFTRIGVLVYGLCMLQVALRVQLNVMGGYLYKDSVQ--------EGDPMVDSNLQT 158
Query: 179 KFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS---T 235
K+LS + V + LI ++ + V++ LK IT + +++ I ++ +
Sbjct: 159 KYLSLCHYFVGQGIEDLIKRIEKIVKRVVEPVWLKKKITLQEVEQMFWSIQTIWCTDTVE 218
Query: 236 GSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCF 295
G P + Y ++ + +DS + + K ++E+ EV+ T + V S C
Sbjct: 219 GDPLKNMVYYLIGHN-----EINDSKWDTIVKETMDILESDEVISVT--MSSVSRSFSCV 271
Query: 296 TDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFF 355
D E L K + Q+E +VIT+ K + + D+ +V+++F
Sbjct: 272 ID----------EVANLLVTKSIPPSKNQLEVEDHVITSGVLKLKSEPFV-DVNKVEIYF 320
Query: 356 TLL 358
L
Sbjct: 321 VKL 323
>ref|XP_001661904.1| perixosomal biogenesis factor [Aedes aegypti]
gb|EAT36113.1| perixosomal biogenesis factor [Aedes aegypti]
Length = 373
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 31/219 (14%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEII-KTQMKA 62
++ F+ +HRRK + T LGSG L K+ R ER+ EI K +
Sbjct: 5 IKDFFYRHRRKFITTGVVLGSGLFLIKIIQYKLREF--------QERQAKEIAEKFKRMQ 56
Query: 63 HFESIQMIVDSTTLPHAMQFLSIRISE----EIDVSHVMDRLNQGKGMLSPPEKLQLWDE 118
HFES + + T + LS +SE ++ S V+++L +P KL LWDE
Sbjct: 57 HFESTERTCNQTIVG-----LSPTVSEKALKDLSTSEVLEKLRS-----NPDNKLDLWDE 106
Query: 119 LKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQ 178
LKIL+F+R+V +++ +ML++ ++ Q+N+LG +LY DT + ++ I D +
Sbjct: 107 LKILAFSRIVTLVYASSMLAVTLKTQINLLGGYLYKDT--------MGQDDKQITVDIQT 158
Query: 179 KFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVIT 217
+LS + + + L++ ++ + V++ LK +T
Sbjct: 159 TYLSMIQYFMGEGLDRLMAVVRKNVTVVMQRYNLKQQLT 197
>dbj|BAE91223.1| unnamed protein product [Macaca fascicularis]
Length = 183
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 23/197 (11%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + ERE A + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQ--EREAA-----EYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A A+G + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLIS 197
LSS L+ + + LI+
Sbjct: 165 LSSIQHLLGDGLTELIT 181
>ref|XP_625168.1| PREDICTED: similar to CG6859-PA [Apis mellifera]
Length = 379
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 73/308 (23%), Positives = 146/308 (47%), Gaps = 45/308 (14%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
+RGF +HRRK +V +GS +++ Y + RRL RE + D + +++ + +
Sbjct: 5 LRGFVNRHRRKFIVGGIVVGS--IIFIRYTA--RRL----REWQEKEIKDMLDRSKRRQY 56
Query: 64 FES-----IQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDE 118
FE QMIV T+ L I + +D + ++++L G P+K+ W+E
Sbjct: 57 FECNERTCSQMIVSLTST------LRDSIIKVLDTNTIVNKLRNG-----CPDKIACWNE 105
Query: 119 LKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQ 178
LKIL+ R + ++S ML+ IR+Q NI+G H+Y D + G++ + +
Sbjct: 106 LKILAIARSAVVVYSYAMLATLIRIQFNIMGGHVYKDIQNSNGTT--------TENIIQT 157
Query: 179 KFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP 238
K++S + + + + L ++ E+ LKD +T R ++E + + S
Sbjct: 158 KYMSLSRHFIYDEIKKLSLLIKDKVAEITASISLKDELTLRDIEEIYWALTSSISADSSK 217
Query: 239 H---HWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCF 295
+ + +Y+++ S+ +E +L ET ++L + E N+ + +++
Sbjct: 218 NPIKNLAEYMLL----------SNCEEEQSPILLKLFNETLDLLETEEVQNLTQSNIRNG 267
Query: 296 TDVLVEEM 303
+LV+ +
Sbjct: 268 FSLLVDHI 275
>ref|XP_001604955.1| PREDICTED: similar to perixosomal biogenesis factor [Nasonia
vitripennis]
Length = 360
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 81/338 (23%), Positives = 154/338 (45%), Gaps = 42/338 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEII-KTQMKA 62
+R F+ HRRK L + G+ +L + S R E+E +E++ +++ +
Sbjct: 5 IRNFFYNHRRKFLFSGVFFGTLIILARYARSKLREW--------QEKEVNELLERSRRRQ 56
Query: 63 HFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKIL 122
HFES + D T L + L ++ +D +++ L G +K+ W+ LKIL
Sbjct: 57 HFESTERTCDQTVLMLSKN-LRTATTKCLDCMKIVNDLRNGS-----TDKISAWNRLKIL 110
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
+ +R ++S TML + +R+Q+N+LG + D+ S E+VD DR E K+LS
Sbjct: 111 AISRTATIIYSYTMLVITLRIQLNVLGGSMLKDSKIGDSSPQSSEKVD--DRMKE-KYLS 167
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF--MSTGSPHH 240
+ L+ + + L +Q EE+ L D + R +Q I + P
Sbjct: 168 LCENLMEHGVEKLSLLIQEKVEEITASYSLGDKLHLRDVQHIYWAITSTVSAVEKSEPVK 227
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
+ ++ D ++ SD+ ++K L+ +T ++L S E ++++ +L+ +L+
Sbjct: 228 NISSYLIADDF----IKNNQSDKPLAK---LLDQTLDLLESQEVQDLMQTNLRSGFALLI 280
Query: 301 EEM-----ETQTEAGGLATGK----------PLAKVLP 323
+ + E G + G P+AK++P
Sbjct: 281 DRISEYFNENAKSDGETSNGDNFVNLNAVTMPMAKIIP 318
>ref|XP_312432.3| AGAP002507-PA [Anopheles gambiae str. PEST]
gb|EAA08024.4| AGAP002507-PA [Anopheles gambiae str. PEST]
Length = 379
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 81/305 (26%), Positives = 138/305 (45%), Gaps = 36/305 (11%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEI-IKTQMKA 62
++ F +HRRK + T +G L K R L ER+ EI K +
Sbjct: 5 IKDFIYRHRRKFITTGVVIGGSVFLLKWLQYKLREL--------QERQAKEIGEKLKRMQ 56
Query: 63 HFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKIL 122
H+E + T L LS +SE++ S D + K +P KL+LW+EL+I+
Sbjct: 57 HYECTDRTCNQTILG-----LSPALSEKVFQSLSTDDI-LAKLRTNPDNKLELWEELRIV 110
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
+FTR++ ++ +ML++ +RVQ+NILG +LY T + EV + +LS
Sbjct: 111 AFTRLITLVYGASMLAVTLRVQINILGGYLYKATVEDSQQQAISLEV-------QTAYLS 163
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST--GSPHH 240
+ + + LI ++ + V++ LK +T ET++ +++ ++ G+P
Sbjct: 164 LIQHFMRDGIDRLIEIVRKNVTTVMQRYSLKQQLTL-ADTETLLWSIEMALNNEKGNPID 222
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNI----VEISLKCFT 296
+ +P + S T D + F + ET +VL S E T + V I L
Sbjct: 223 GIATYTLP-NPGASLTGVDGA------FSTMFQETLDVLESVESTEVSLANVSIGLAKVM 275
Query: 297 DVLVE 301
D L +
Sbjct: 276 DKLAD 280
>gb|AAI58162.1| Unknown (protein for MGC:135489) [Xenopus tropicalis]
Length = 186
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 83/154 (53%), Gaps = 19/154 (12%)
Query: 7 FWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
F ++H++K + G YLL K R + ERE A + I + + + HFES
Sbjct: 7 FLKRHKKKFIFVGAVAGGVYLLGKYAQRKIREIQ--EREAA-----EYIAQARRQYHFES 59
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E S + ++ P KL++W++LKI+S
Sbjct: 60 NQRTCNMTVLSMLPALREGLMQQLNSESLTSLLKNK---------PSNKLEIWEDLKIIS 110
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTA 157
F+R +++++S ML + +RVQ+NI+G ++Y+D +
Sbjct: 111 FSRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNS 144
>emb|CAD92492.1| peroxisomal biogenesis factor 3 [Homo sapiens]
Length = 182
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 76/120 (63%), Gaps = 4/120 (3%)
Query: 109 PPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEE 168
P KL++W++LKI+SFTR ++++S ML + +RVQ+NI+G ++Y+D A A+G +
Sbjct: 53 PSNKLEIWEDLKIISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNA-AVGKNG---T 108
Query: 169 VDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQI 228
L D +Q++LSS L+ + + LI+ ++ + ++VL LK ++ L++ + +I
Sbjct: 109 TILAPPDVQQQYLSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEI 168
>ref|XP_970039.1| PREDICTED: similar to CG6859-PA [Tribolium castaneum]
Length = 344
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
VR F+ +HR K +V +G L TR RE + + + + + H
Sbjct: 7 VRNFFSRHRNKFIVGGVIIGGSIFL-------TRYAQQKLREWQEKEALEFLDRNRKHQH 59
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
FESI + T L A+ L+ IS+ I+ V++RL +P KL LW+ELK+L
Sbjct: 60 FESIGRTCNQTILNLALA-LNETISKNINTEEVIERLKT-----NPENKLALWNELKVLV 113
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVD 155
F + ++++ ML + +++Q++I+G +LY D
Sbjct: 114 FNKAACTIYANVMLVVTLKIQLSIIGGYLYKD 145
>ref|XP_659885.1| hypothetical protein AN2281.2 [Aspergillus nidulans FGSC A4]
gb|EAA64392.1| hypothetical protein AN2281.2 [Aspergillus nidulans FGSC A4]
Length = 530
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/219 (22%), Positives = 108/219 (49%), Gaps = 26/219 (11%)
Query: 112 KLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDL 171
K QLW+E+KI S TR ++++++L+++ RVQ+N+LGR Y+ + +L + + L
Sbjct: 158 KTQLWNEVKITSITRAFTLIYTLSLLTIFTRVQLNLLGRRNYLSSVISLATPADSSRITL 217
Query: 172 IDRDDE------------QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTR 219
D DD+ +++L+ + +L+ L+ +++ + EV +D I+
Sbjct: 218 EDHDDDLTQTLGNDFETNRRYLAFSWWLLHRGWKQLMEEVKAAVVEVFGPLNPRDDISFD 277
Query: 220 VLQETVMQIVDVFMSTGSPHH----WVDYLMMP--------QDTKLSRTTSDSSDEAVSK 267
L E +Q+ W+ YL+ P +++ + T S+ + +
Sbjct: 278 KLSELTLQVRKKIEGATEEERKRRKWLPYLLPPREDEDHLLEESGVLGVTEPSTPQTAAT 337
Query: 268 FHQLMVETREVLISTEFTNI-VEISLKCFTDVLVEEMET 305
L+ ET +++ S FT + + ++ +CF + L+++ +T
Sbjct: 338 LRHLLDETADLIDSPTFTRVQMLLNNECF-ETLIQQCKT 375
>ref|XP_001218024.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gb|EAU30539.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 525
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 73/368 (19%), Positives = 159/368 (43%), Gaps = 73/368 (19%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYL-----LYKLYNSHTRRLAD------LERELAHEREN- 52
R ++R++R+ + + AG +G+GYL L K+ + R +D L R + +
Sbjct: 6 RRWFRRNRKPLAIGAGVIGAGYLAGQYVLSKISEARERMSSDRIARENLRRRFEQNQTDC 65
Query: 53 ---------------------DEIIKTQMKAHFESIQMIVDSTTLPHAMQFLSIRISEE- 90
+E+ K K E + + + M L+ ++EE
Sbjct: 66 TYTVLALLPTAAEDILEALPVEELTKELQKKRAERLARLNAAEGTGSDMTSLAPSLTEED 125
Query: 91 ------------IDVSHVMDRLNQGKGMLSPPE-KLQLWDELKILSFTRMVLSLWSVTML 137
+ S + + + P + K QLW+E+KI S TR ++++++L
Sbjct: 126 RRSLSSFQSEGFVRTSQLTEAPGENDAESRPKKNKTQLWNEVKITSITRSFTLIYTLSLL 185
Query: 138 SLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDE-------------QKFLSSA 184
+++ R+Q+N+LGR Y+ + +L + + L D DD+ +++L+ +
Sbjct: 186 TIFTRIQLNLLGRRNYLSSVISLATPADASTIRLEDHDDDDLTQTLGNDFETNRRYLAFS 245
Query: 185 DFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQI---VDVFMSTGSPHH- 240
+L+ +L+ ++Q + EE ++ I+ L + +++ V+ H
Sbjct: 246 WWLLHCGWKNLMKEVQAAVEETFGPLNPREDISLGRLSDLTLEVRKRVEGATEEDRKHRK 305
Query: 241 WVDYLMMP--------QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVE-IS 291
W+ YL+ P +++ + T S+ + + L+ ET +++ S FT I+ ++
Sbjct: 306 WLSYLLPPREEEDKLLEESGVLGVTEPSTSQTATTLRHLLDETADLIDSPTFTRIMMLLN 365
Query: 292 LKCFTDVL 299
+CF ++
Sbjct: 366 NECFETLI 373
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
ref|NP_683410.1| PEX3/PEX3-2 (PEROXIN 3-2) [Arabidopsis tha... 506 e-142
gb|AAG60126.1|AC073555_10 lysine and histidine specific tra... 473 e-131
gb|AAM63222.1| unknown [Arabidopsis thaliana] 459 e-127
ref|NP_566598.1| PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana] 458 e-127
ref|XP_518776.1| PREDICTED: peroxisomal biogenesis factor 3... 440 e-121
ref|XP_001091411.1| PREDICTED: peroxisomal biogenesis facto... 439 e-121
gb|AAX37078.1| peroxisomal biogenesis factor 3 [synthetic c... 439 e-121
ref|NP_003621.1| peroxisomal biogenesis factor 3 [Homo sapi... 439 e-121
ref|NP_001092457.1| peroxisomal biogenesis factor 3 [Bos ta... 439 e-121
gb|AAG50845.1|AC074308_1 hypothetical protein, 3' partial [... 439 e-121
ref|XP_541132.2| PREDICTED: similar to Peroxisomal biogenes... 436 e-120
sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 (Perox... 436 e-120
ref|NP_112640.1| peroxisomal biogenesis factor 3 [Rattus no... 436 e-120
emb|CAO68158.1| unnamed protein product [Vitis vinifera] 431 e-119
ref|NP_064345.1| peroxisomal biogenesis factor 3 [Mus muscu... 429 e-118
gb|EDL03500.1| peroxisomal biogenesis factor 3, isoform CRA... 429 e-118
ref|XP_001370565.1| PREDICTED: similar to peroxisomal bioge... 429 e-118
dbj|BAC35986.1| unnamed protein product [Mus musculus] 427 e-118
ref|XP_419708.1| PREDICTED: similar to peroxisomal biogenes... 424 e-117
ref|NP_956522.1| peroxisomal biogenesis factor 3 [Danio rer... 415 e-114
ref|XP_001331521.1| PREDICTED: hypothetical protein [Danio ... 414 e-114
ref|NP_001039031.1| peroxisomal biogenesis factor 3 [Xenopu... 413 e-113
ref|NP_001085641.1| MGC82731 protein [Xenopus laevis] >gi|4... 409 e-112
gb|EDL03499.1| peroxisomal biogenesis factor 3, isoform CRA... 401 e-110
ref|XP_001507262.1| PREDICTED: similar to peroxisomal bioge... 397 e-108
ref|NP_001062839.1| Os09g0314300 [Oryza sativa (japonica cu... 396 e-108
ref|XP_001497293.1| PREDICTED: similar to peroxisomal bioge... 384 e-105
ref|XP_001176855.1| PREDICTED: similar to peroxisomal bioge... 383 e-104
ref|XP_780894.2| PREDICTED: similar to peroxisomal biogenes... 383 e-104
gb|EAZ08561.1| hypothetical protein OsI_029793 [Oryza sativ... 383 e-104
ref|NP_974332.1| PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana] 379 e-103
ref|XP_001769437.1| predicted protein [Physcomitrella paten... 370 e-101
ref|XP_001753372.1| predicted protein [Physcomitrella paten... 361 5e-98
ref|XP_001755103.1| predicted protein [Physcomitrella paten... 356 1e-96
ref|XP_001172297.1| PREDICTED: similar to Pex3 protein isof... 353 1e-95
ref|XP_001635320.1| predicted protein [Nematostella vectens... 335 4e-90
ref|XP_369909.2| hypothetical protein MGG_06424 [Magnaporth... 327 1e-87
ref|XP_001218024.1| conserved hypothetical protein [Aspergi... 327 1e-87
ref|XP_001817054.1| hypothetical protein [Aspergillus oryza... 319 2e-85
ref|XP_659885.1| hypothetical protein AN2281.2 [Aspergillus... 318 4e-85
gb|ABH11414.1| peroxin 3 [Penicillium chrysogenum] 313 9e-84
ref|XP_505754.1| YlPEX3 [Yarrowia lipolytica] >gi|54036237|... 302 2e-80
ref|XP_001863328.1| peroxisomal biogenesis factor 3 [Culex ... 301 5e-80
ref|XP_387118.1| hypothetical protein FG06942.1 [Gibberella... 301 6e-80
ref|XP_001604955.1| PREDICTED: similar to perixosomal bioge... 300 1e-79
ref|NP_001040264.1| peroxisomal biogenesis factor 3 [Bombyx... 295 3e-78
ref|XP_001242086.1| hypothetical protein CIMG_05982 [Coccid... 293 2e-77
ref|XP_001398373.1| hypothetical protein An17g01440 [Asperg... 292 2e-77
ref|XP_001266008.1| peroxisomal membrane protein (Pex3), pu... 289 2e-76
gb|EDP51377.1| peroxisomal membrane protein (Pex3), putativ... 289 2e-76
ref|XP_754003.1| peroxisomal membrane protein (Pex3) [Asper... 288 4e-76
ref|XP_001273964.1| peroxisomal membrane protein (Pex3), pu... 285 4e-75
emb|CAF91476.1| unnamed protein product [Tetraodon nigrovir... 282 3e-74
ref|XP_001661904.1| perixosomal biogenesis factor [Aedes ae... 278 3e-73
ref|XP_962987.1| hypothetical protein NCU06175 [Neurospora ... 278 5e-73
ref|XP_001598504.1| hypothetical protein SS1G_00593 [Sclero... 274 7e-72
ref|XP_001805510.1| hypothetical protein SNOG_15360 [Phaeos... 270 9e-71
ref|XP_625168.1| PREDICTED: similar to CG6859-PA [Apis mell... 270 1e-70
ref|XP_312432.3| AGAP002507-PA [Anopheles gambiae str. PEST... 264 6e-69
gb|EDU40742.1| peroxisomal membrane protein (Pex3) [Pyrenop... 261 7e-68
ref|XP_001555052.1| hypothetical protein BC1G_06575 [Botryo... 257 1e-66
ref|XP_970039.1| PREDICTED: similar to CG6859-PA [Tribolium... 251 5e-65
ref|XP_001730507.1| hypothetical protein MGL_2303 [Malassez... 244 1e-62
dbj|BAE91223.1| unnamed protein product [Macaca fascicularis] 244 1e-62
ref|XP_501103.1| hypothetical protein [Yarrowia lipolytica]... 234 8e-60
dbj|BAB02028.1| unnamed protein product [Arabidopsis thaliana] 233 2e-59
ref|NP_648753.1| CG6859 CG6859-PA [Drosophila melanogaster]... 232 3e-59
ref|XP_640890.1| transmembrane protein [Dictyostelium disco... 226 2e-57
ref|XP_001353169.1| GA19910-PA [Drosophila pseudoobscura] >... 225 5e-57
sp|Q92262|PEX3_PICPA Peroxisomal biogenesis factor 3 (Perox... 210 1e-52
emb|CAD92492.1| peroxisomal biogenesis factor 3 [Homo sapiens] 200 1e-49
gb|AAI58162.1| Unknown (protein for MGC:135489) [Xenopus tr... 200 1e-49
ref|XP_762347.1| hypothetical protein UM06200.1 [Ustilago m... 190 1e-46
emb|CAO68151.1| unnamed protein product [Vitis vinifera] 166 2e-39
Sequences not found previously or not previously below threshold:
dbj|BAE87522.1| unnamed protein product [Macaca fascicularis] 275 4e-72
gb|EEH36161.1| peroxin 3 [Paracoccidioides brasiliensis Pb01] 255 5e-66
ref|XP_001229801.1| hypothetical protein CHGG_03285 [Chaeto... 228 4e-58
gb|EEH46051.1| peroxin 3 [Paracoccidioides brasiliensis Pb18] 223 1e-56
sp|Q01497|PEX3_PICAN Peroxisomal biogenesis factor 3 (Perox... 183 2e-44
ref|XP_714071.1| peroxisomal integral membrane protein Pex3... 156 2e-36
ref|XP_713871.1| hypothetical protein CaO19.4426 [Candida a... 156 3e-36
ref|XP_001200198.1| PREDICTED: similar to Pex3 protein, par... 149 5e-34
ref|XP_001485386.1| hypothetical protein PGUG_03115 [Pichia... 148 7e-34
ref|XP_001385728.2| Peroxisomal biogenesis factor 3 (Peroxi... 147 2e-33
ref|XP_461471.1| hypothetical protein DEHA0F27577g [Debaryo... 142 3e-32
ref|XP_001908169.1| unnamed protein product [Podospora anse... 139 3e-31
ref|XP_001536607.1| conserved hypothetical protein [Ajellom... 134 1e-29
ref|XP_001528327.1| conserved hypothetical protein [Loddero... 133 2e-29
ref|NP_010616.1| Peroxisomal membrane protein (PMP) require... 119 4e-25
ref|NP_984393.1| ADR296Cp [Ashbya gossypii ATCC 10895] >gi|... 115 4e-24
ref|XP_001878936.1| predicted protein [Laccaria bicolor S23... 115 7e-24
ref|XP_001884959.1| predicted protein [Laccaria bicolor S23... 109 3e-22
ref|XP_001892993.1| Peroxin-3 family protein [Brugia malayi... 109 3e-22
gb|AAB52665.2| Peroxisome assembly factor protein 3, isofor... 107 1e-21
ref|XP_449403.1| hypothetical protein CAGL0M01342g [Candida... 106 3e-21
ref|XP_454714.1| unnamed protein product [Kluyveromyces lac... 104 9e-21
ref|XP_001676849.1| Hypothetical protein CBG14834 [Caenorha... 99 5e-19
ref|XP_001646509.1| hypothetical protein Kpol_1055p7 [Vande... 99 5e-19
ref|NP_594868.2| peroxin-3 (predicted) [Schizosaccharomyces... 83 4e-14
ref|XP_776678.1| hypothetical protein CNBC1690 [Cryptococcu... 82 5e-14
ref|XP_569751.1| Pex3p [Cryptococcus neoformans var. neofor... 79 5e-13
pir||T38475 hypothetical protein SPAC29A4.14c - fission yea... 75 1e-11
ref|XP_001536606.1| conserved hypothetical protein [Ajellom... 74 1e-11
ref|XP_001840540.1| predicted protein [Coprinopsis cinerea ... 72 8e-11
ref|NP_509025.1| PeRoXisome assembly factor family member (... 61 1e-07
ref|XP_001359715.1| GA18583-PA [Drosophila pseudoobscura] >... 50 3e-04
ref|NP_509024.1| C15H9.10 [Caenorhabditis elegans] >gi|1293... 46 0.005
ref|XP_001421344.1| predicted protein [Ostreococcus lucimar... 44 0.022
ref|ZP_02736189.1| probable serine/threonine protein kinase... 41 0.12
ref|ZP_00996975.1| probable chromosome partitioning ATPase ... 40 0.22
ref|NP_193243.1| DC1 domain-containing protein [Arabidopsis... 40 0.23
ref|ZP_02085343.1| hypothetical protein CLOBOL_02879 [Clost... 40 0.29
ref|XP_001433938.1| hypothetical protein GSPATT00035670001 ... 39 0.53
ref|XP_001457454.1| hypothetical protein GSPATT00023230001 ... 39 0.59
ref|XP_389783.1| DYHC_FUSSO Dynein heavy chain, cytosolic (... 39 0.64
ref|YP_096471.1| hypothetical protein lpg2464 [Legionella p... 39 0.76
ref|XP_001426142.1| hypothetical protein GSPATT00029372001 ... 38 1.1
ref|XP_001435774.1| hypothetical protein GSPATT00037161001 ... 38 1.1
ref|XP_001446631.1| hypothetical protein GSPATT00014201001 ... 38 1.1
ref|NP_496514.1| yeast PAT1(protein associated with topo II... 38 1.1
ref|ZP_01884017.1| periplasmic sensor signal transduction h... 38 1.3
ref|YP_127714.1| hypothetical protein lpl2384 [Legionella p... 38 1.4
ref|ZP_02142450.1| two-component hybrid sensor and regulato... 37 1.8
ref|XP_001339325.1| PREDICTED: hypothetical protein [Danio ... 37 2.3
ref|ZP_02060528.1| flagellar biosynthesis protein FlhA [Hyd... 37 3.0
ref|XP_001521746.1| PREDICTED: similar to KIAA0449 protein,... 37 3.1
sp|P78716|DYHC_FUSSO Dynein heavy chain, cytoplasmic (Dynei... 37 3.5
emb|CAB55772.1| microtubule associated protein [Drosophila ... 36 4.2
ref|NP_732105.1| mini spindles CG5000-PA [Drosophila melano... 36 4.2
gb|AAY84896.1| LP04448p [Drosophila melanogaster] 36 4.2
ref|ZP_01235465.1| putative chitinase A [Vibrio angustum S1... 36 4.8
gb|AAL13641.1| GH18634p [Drosophila melanogaster] 36 5.2
ref|ZP_00392454.1| COG0457: FOG: TPR repeat [Bacillus anthr... 35 6.4
ref|XP_001601379.1| PREDICTED: similar to NFX1-type zinc fi... 35 9.3
ref|NP_844585.1| TPR domain protein [Bacillus anthracis str... 35 9.5
ref|XP_001861409.1| peptidoglycan recognition protein-lc [C... 35 9.6
ref|ZP_02540592.1| hypothetical protein BcerW_10927 [Bacill... 35 9.9
>ref|NP_683410.1| PEX3/PEX3-2 (PEROXIN 3-2) [Arabidopsis thaliana]
gb|AAL75911.1| At1g48640/F11I4_17 [Arabidopsis thaliana]
gb|AAM70527.1| At1g48640/F11I4_17 [Arabidopsis thaliana]
dbj|BAD43104.1| unknown protein [Arabidopsis thaliana]
Length = 364
Score = 506 bits (1305), Expect = e-142, Method: Composition-based stats.
Identities = 364/364 (100%), Positives = 364/364 (100%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM
Sbjct: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK
Sbjct: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH
Sbjct: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV
Sbjct: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA
Sbjct: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
Query: 361 NMPQ 364
NMPQ
Sbjct: 361 NMPQ 364
>gb|AAG60126.1|AC073555_10 lysine and histidine specific transporter, putative [Arabidopsis
thaliana]
Length = 809
Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats.
Identities = 339/371 (91%), Positives = 341/371 (91%), Gaps = 30/371 (8%)
Query: 11 HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKT------------ 58
HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKT
Sbjct: 8 HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQLSSVLIKTDPL 67
Query: 59 ------------------QMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL 100
+MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL
Sbjct: 68 DFSSYGFSNGPVLFVLLFRMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL 127
Query: 101 NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL 160
NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL
Sbjct: 128 NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL 187
Query: 161 GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV 220
GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV
Sbjct: 188 GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV 247
Query: 221 LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI 280
LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI
Sbjct: 248 LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI 307
Query: 281 STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR 340
STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR
Sbjct: 308 STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR 367
Query: 341 FLQIIRDLPEV 351
FLQIIRDLPE+
Sbjct: 368 FLQIIRDLPEI 378
>gb|AAM63222.1| unknown [Arabidopsis thaliana]
Length = 358
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 281/364 (77%), Positives = 318/364 (87%), Gaps = 6/364 (1%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MD VRG WRKHRRK+LVT CLGSGYLLYKLYN+HTR+LADLERELA+ERENDEIIKTQM
Sbjct: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQLW+ELK
Sbjct: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSHLL+E+DLI+RDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
L+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMSTGSPHH
Sbjct: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N+ EISLKC LV
Sbjct: 241 WVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLASNDFSNVAEISLKCCAVALV 297
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLFFTLLYA
Sbjct: 298 EEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 354
Query: 361 NMPQ 364
NMPQ
Sbjct: 355 NMPQ 358
>ref|NP_566598.1| PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana]
Length = 358
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 281/364 (77%), Positives = 318/364 (87%), Gaps = 6/364 (1%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MD VRG WRKHRRK+LVT CLGSGYLLYKLYN+HTR+LADLERELA+ERENDEIIKTQM
Sbjct: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQLW+ELK
Sbjct: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSHLL+E+DLI+RDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
L+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMSTGSPHH
Sbjct: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N+ EISLKC LV
Sbjct: 241 WVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCCAVALV 297
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLFFTLLYA
Sbjct: 298 EEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 354
Query: 361 NMPQ 364
NMPQ
Sbjct: 355 NMPQ 358
>ref|XP_518776.1| PREDICTED: peroxisomal biogenesis factor 3 isoform 2 [Pan
troglodytes]
Length = 373
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 91/384 (23%), Positives = 182/384 (47%), Gaps = 46/384 (11%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + + E + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS------ 234
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW 224
Query: 235 ---TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
GS Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 225 INKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLTMEQVKDFAANVYEAFS 366
>ref|XP_001091411.1| PREDICTED: peroxisomal biogenesis factor 3 [Macaca mulatta]
sp|Q60HE1|PEX3_MACFA Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
dbj|BAD51974.1| peroxisomal biogenesis factor 3 [Macaca fascicularis]
Length = 373
Score = 439 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 91/384 (23%), Positives = 182/384 (47%), Gaps = 46/384 (11%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + + E + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS------ 234
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW 224
Query: 235 ---TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
GS Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 225 INKDGSKSLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLTMEQVKDFAANVYEAFS 366
>gb|AAX37078.1| peroxisomal biogenesis factor 3 [synthetic construct]
Length = 374
Score = 439 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 92/384 (23%), Positives = 181/384 (47%), Gaps = 46/384 (11%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + + E + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR ++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS------ 234
LSS L+ + + LI+ ++ + ++VL LK ++ L++ + +I ++
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW 224
Query: 235 ---TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
GS Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 225 INKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLTMEQVKDFAANVYEAFS 366
>ref|NP_003621.1| peroxisomal biogenesis factor 3 [Homo sapiens]
sp|P56589|PEX3_HUMAN Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
emb|CAA04879.1| Pex3 protein [Homo sapiens]
emb|CAA10362.1| PEX3 protein [Homo sapiens]
emb|CAA08904.1| Pex3p [Homo sapiens]
emb|CAB53744.1| peroxisomal biogenesis factor 3 [Homo sapiens]
dbj|BAA97993.1| Pex3p [Homo sapiens]
gb|AAH14551.1| Peroxisomal biogenesis factor 3 [Homo sapiens]
gb|AAH15506.1| Peroxisomal biogenesis factor 3 [Homo sapiens]
gb|AAQ18039.1| transformation-related protein 18 [Homo sapiens]
emb|CAG46859.1| PEX3 [Homo sapiens]
gb|EAW47866.1| peroxisomal biogenesis factor 3 [Homo sapiens]
Length = 373
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 92/384 (23%), Positives = 181/384 (47%), Gaps = 46/384 (11%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG Y+L K R + + E + I + + + H
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR ++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS------ 234
LSS L+ + + LI+ ++ + ++VL LK ++ L++ + +I ++
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW 224
Query: 235 ---TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
GS Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 225 INKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLTMEQVKDFAANVYEAFS 366
>ref|NP_001092457.1| peroxisomal biogenesis factor 3 [Bos taurus]
gb|AAI46193.1| MGC166343 protein [Bos taurus]
Length = 373
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 93/384 (24%), Positives = 181/384 (47%), Gaps = 46/384 (11%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
F ++H++K + LG Y+L K R + + E + I + + + H
Sbjct: 5 TWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKTR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTVLAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFM------- 233
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I D+
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRDLVEQHKSSSW 224
Query: 234 --STGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
+ GS Y+M ++T L+ S V+ +L+ ETR++L S +F+ ++
Sbjct: 225 INNDGSKSLLCHYMMPDEETPLAVQACGLSPRDVTTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M E + G + PLAK++P I ++ + +E + +
Sbjct: 284 LSRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIINGQIHSVCSE-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLMMEQVKDFAANVYEAFS 366
>gb|AAG50845.1|AC074308_1 hypothetical protein, 3' partial [Arabidopsis thaliana]
Length = 443
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 330/368 (89%), Positives = 333/368 (90%), Gaps = 35/368 (9%)
Query: 11 HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKT------------ 58
HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKT
Sbjct: 8 HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQLSSVLIKTDPL 67
Query: 59 ------------------QMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL 100
+MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL
Sbjct: 68 DFSSYGFSNGPVLFVLLFRMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL 127
Query: 101 NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL 160
NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL
Sbjct: 128 NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL 187
Query: 161 GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV 220
GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV
Sbjct: 188 GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV 247
Query: 221 LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI 280
LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI
Sbjct: 248 LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI 307
Query: 281 STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR 340
STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR
Sbjct: 308 STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR 367
Query: 341 -----FLQ 343
++Q
Sbjct: 368 LSDKMYIQ 375
>ref|XP_541132.2| PREDICTED: similar to Peroxisomal biogenesis factor 3 (Peroxin-3)
(Peroxisomal assembly protein PEX3) [Canis familiaris]
Length = 487
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 90/385 (23%), Positives = 182/385 (47%), Gaps = 48/385 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
F ++H++K + LG Y+L K R + + E + I + + + H
Sbjct: 119 TWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYH 171
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P + L +++ E + + +R P KL++W++LK
Sbjct: 172 FESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 222
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 223 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTVLAPPDVQQQY 278
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++ S
Sbjct: 279 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSS-S 337
Query: 241 WVD----------YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEI 290
W++ Y+M ++T L+ S V+ +L+ ETR++L S +F+ ++
Sbjct: 338 WINKDESKSLLCHYMMPDEETPLAVQACGLSPRDVTTI-KLLNETRDMLESPDFSTVLNT 396
Query: 291 SLKCFTDVLVEEM-------ETQTEA-----GGLATGKPLAKVLPQIEKTMNVITAEPSK 338
L L++ M E + + PLAK++P + ++ + +E +
Sbjct: 397 CLNRGFSRLLDNMAEFFRPTEQDLQHSNSMSSLSSVSLPLAKIIPIVNGQIHSVCSE-TP 455
Query: 339 NRFLQIIRDLPEVKLFFTLLYANMP 363
+ F+Q + + +VK F +Y
Sbjct: 456 SHFVQDLLMMEQVKDFAANVYEAFS 480
>sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
dbj|BAA97994.1| Pex3p [Cricetulus longicaudatus]
Length = 373
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 88/383 (22%), Positives = 179/383 (46%), Gaps = 46/383 (12%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
F ++H++K + LG Y+L K R + + E + I + + + HF
Sbjct: 6 WNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYHF 58
Query: 65 ESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKI 121
ES Q + T L P + L +++ E + + +R P KL++W++LKI
Sbjct: 59 ESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLKI 109
Query: 122 LSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFL 181
+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++L
Sbjct: 110 ISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TTVLAPPDVQQQYL 165
Query: 182 SSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP--- 238
SS L+ + + L++ ++ + + +L LK ++ L++ + +I + SP
Sbjct: 166 SSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHRSPSWI 225
Query: 239 ------HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 226 DKDVSKSSLCQYMMPDEETPLAAQAYGLSPRDITTI-KLLNETRDMLESPDFSTVLNTCL 284
Query: 293 KCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNR 340
L++ M E + G + PLAK++P + ++ + ++ + +
Sbjct: 285 NRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSD-TPSH 343
Query: 341 FLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 344 FVQDLLMMEQVKDFAANVYEAFS 366
>ref|NP_112640.1| peroxisomal biogenesis factor 3 [Rattus norvegicus]
sp|Q9JJK4|PEX3_RAT Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
dbj|BAA97992.1| Pex3p [Rattus norvegicus]
gb|AAH62046.1| Peroxisomal biogenesis factor 3 [Rattus norvegicus]
gb|EDL93733.1| peroxisomal biogenesis factor 3 [Rattus norvegicus]
Length = 372
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 88/382 (23%), Positives = 178/382 (46%), Gaps = 45/382 (11%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
F ++H++K + LG Y+L K R + + E + I + + + HF
Sbjct: 6 WNFLKRHKKKCIFLGTVLGGVYILGKYGQKKLREIQERE-------AAEYIAQARRQYHF 58
Query: 65 ESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKI 121
ES Q + T L P + L +++ E + + +R P KL++W++LKI
Sbjct: 59 ESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLKI 109
Query: 122 LSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFL 181
+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++L
Sbjct: 110 ISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TSILAPPDVQQQYL 165
Query: 182 SSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTG----- 236
SS L+ + + L++ ++ + + +L LK ++ L++ + +I +
Sbjct: 166 SSIQHLLGDGLTELVTVIKQAVQRILGSISLKHSLSLLDLEQKLKEIRTLVEQHRSCWND 225
Query: 237 ---SPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK 293
S Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 226 KDASKSSLCHYMMPDEETPLAAQAYGLSPRDITTI-KLLNETRDMLESPDFSTVLNTCLN 284
Query: 294 CFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
L++ M E + G + PLAK++P + ++ + +E + + F
Sbjct: 285 RGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSHF 343
Query: 342 LQIIRDLPEVKLFFTLLYANMP 363
+Q + + +VK F +Y
Sbjct: 344 VQDLLMMEQVKDFAANVYEAFS 365
>emb|CAO68158.1| unnamed protein product [Vitis vinifera]
Length = 375
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 224/366 (61%), Positives = 281/366 (76%), Gaps = 8/366 (2%)
Query: 6 GFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFE 65
FWR+HRRK+ V+ G GSGYLLYKLY++H RRL DLERELA +REN+E+IK QM+AHFE
Sbjct: 8 DFWRRHRRKIFVSVGVFGSGYLLYKLYDAHRRRLDDLERELAVQRENEELIKAQMQAHFE 67
Query: 66 SIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLS---PPEKLQLWDELKIL 122
SIQ I D+TTLPH+M +LS RI+EE+D+SH+ +RL +GKG + P EKL+LWD LKIL
Sbjct: 68 SIQRIADTTTLPHSMLYLSGRIAEELDLSHLTERLMKGKGQPNTLTPSEKLELWDRLKIL 127
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
SFTRMVLSLW++TMLSLYIRVQVNILGRHLY+DTAR GSSHLLEE D IDR D+QKFL+
Sbjct: 128 SFTRMVLSLWAMTMLSLYIRVQVNILGRHLYIDTARGGGSSHLLEEADPIDRHDQQKFLA 187
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWV 242
SADFL ++P+LIS+M +A EVLKGKQL+DV + VL T+MQI+D+F+STG PH+ V
Sbjct: 188 SADFLSNYSIPALISNMHAAAAEVLKGKQLRDVFNSMVLHGTIMQILDLFISTGKPHNLV 247
Query: 243 DYLMMPQD---TKLSRTTSDSS-DEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDV 298
DYLM S + DSS V+KF QLMVETR VL S EF N++++SL+ D
Sbjct: 248 DYLMPDDTKSYKPASPSNGDSSTPADVTKFDQLMVETRAVLSSAEFINVIDVSLRTVVDA 307
Query: 299 LVEEME-TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTL 357
+VE+M Q G ++G LAK+LP++ + ++ EPSKNRF+QII+ PEV+ FFTL
Sbjct: 308 VVEDMMGVQLGGGSPSSGMVLAKLLPRVAQMGPLLLEEPSKNRFIQIIQKAPEVEFFFTL 367
Query: 358 LYANMP 363
LYANMP
Sbjct: 368 LYANMP 373
>ref|NP_064345.1| peroxisomal biogenesis factor 3 [Mus musculus]
sp|Q9QXY9|PEX3_MOUSE Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
gb|AAF14524.1|AF152996_1 peroxisomal assembly protein PEX3 [Mus musculus]
gb|AAG24507.1| peroxisomal assembly protein PEX3P [Mus musculus]
gb|AAH37606.1| Peroxisomal biogenesis factor 3 [Mus musculus]
gb|AAH33415.1| Peroxisomal biogenesis factor 3 [Mus musculus]
dbj|BAE27544.1| unnamed protein product [Mus musculus]
Length = 372
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 88/382 (23%), Positives = 177/382 (46%), Gaps = 45/382 (11%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
F ++H++K + LG Y+L K R + + E + I + + + HF
Sbjct: 6 WNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYHF 58
Query: 65 ESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKI 121
ES Q + T L P + L +++ E + + R P KL++W++LKI
Sbjct: 59 ESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKSR---------PSNKLEIWEDLKI 109
Query: 122 LSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFL 181
+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++L
Sbjct: 110 ISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TTVLAPPDVQQQYL 165
Query: 182 SSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP--- 238
SS L+ + + L++ ++ + + +L LK ++ L++ + +I + S
Sbjct: 166 SSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWND 225
Query: 239 -----HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK 293
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 226 KDVSRSSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLLNETRDMLESPDFSTVLNTCLN 284
Query: 294 CFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
L++ M E + G + PLAK++P + ++ + +E + + F
Sbjct: 285 RGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSHF 343
Query: 342 LQIIRDLPEVKLFFTLLYANMP 363
+Q + + +VK F +Y
Sbjct: 344 VQDLLMMEQVKDFAANVYEAFS 365
>gb|EDL03500.1| peroxisomal biogenesis factor 3, isoform CRA_b [Mus musculus]
Length = 372
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 88/382 (23%), Positives = 177/382 (46%), Gaps = 45/382 (11%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
F ++H++K + LG Y+L K R + + E + I + + + HF
Sbjct: 6 WNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYHF 58
Query: 65 ESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKI 121
ES Q + T L P + L +++ E + + R P KL++W++LKI
Sbjct: 59 ESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKSR---------PSNKLEIWEDLKI 109
Query: 122 LSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFL 181
+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++L
Sbjct: 110 ISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TTILAPPDVQQQYL 165
Query: 182 SSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP--- 238
SS L+ + + L++ ++ + + +L LK ++ L++ + +I + S
Sbjct: 166 SSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWND 225
Query: 239 -----HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK 293
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 226 KDVSRSSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLLNETRDMLESPDFSTVLNTCLN 284
Query: 294 CFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
L++ M E + G + PLAK++P + ++ + +E + + F
Sbjct: 285 RGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSHF 343
Query: 342 LQIIRDLPEVKLFFTLLYANMP 363
+Q + + +VK F +Y
Sbjct: 344 VQDLLMMEQVKDFAANVYEAFS 365
>ref|XP_001370565.1| PREDICTED: similar to peroxisomal biogenesis factor 3 [Monodelphis
domestica]
Length = 373
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 89/384 (23%), Positives = 180/384 (46%), Gaps = 46/384 (11%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K L LG Y+L K R + + E + I + + + H
Sbjct: 5 VWNFLKRHKKKCLFLGTFLGGVYILGKYGQKKIREIQEKE-------AAEYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P L +++ E + + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLRDALMQQLNSENLTALLKNR---------PSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L L + +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTL----LAPPEVQQRY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGS--- 237
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I + S
Sbjct: 165 LSSIQHLLGDGLTELITVVKQAVQKILGSVSLKHSLSLLELEQKLKEIRKISEQHTSSSW 224
Query: 238 ------PHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
Y+M ++T L+ ++ ++ +L+ ETR++L S +F+ ++
Sbjct: 225 IDKTGPKSLLCQYMMPDEETPLAIQACGLTEGDITTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEME------------TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M + + + PLAK++P I ++ + +E + +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLNHSDSMNSLSSVSLPLAKIIPIINGQIHSVCSE-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLMMEQVKDFAANVYEAFS 366
>dbj|BAC35986.1| unnamed protein product [Mus musculus]
Length = 372
Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats.
Identities = 88/382 (23%), Positives = 177/382 (46%), Gaps = 45/382 (11%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
F ++H++K + LG Y+L K R + + E + I + + + HF
Sbjct: 6 WNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYHF 58
Query: 65 ESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKI 121
ES Q + T L P + L +++ E + + R P KL++W++LKI
Sbjct: 59 ESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKSR---------PSSKLEIWEDLKI 109
Query: 122 LSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFL 181
+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++L
Sbjct: 110 ISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TTVLAPPDVQQQYL 165
Query: 182 SSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP--- 238
SS L+ + + L++ ++ + + +L LK ++ L++ + +I + S
Sbjct: 166 SSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWND 225
Query: 239 -----HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK 293
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 226 KDVSRSSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLLNETRDMLESPDFSTVLNTCLN 284
Query: 294 CFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
L++ M E + G + PLAK++P + ++ + +E + + F
Sbjct: 285 RGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSHF 343
Query: 342 LQIIRDLPEVKLFFTLLYANMP 363
+Q + + +VK F +Y
Sbjct: 344 VQDLLMMEQVKDFAANVYEAFS 365
>ref|XP_419708.1| PREDICTED: similar to peroxisomal biogenesis factor 3 [Gallus
gallus]
Length = 369
Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 95/380 (25%), Positives = 177/380 (46%), Gaps = 42/380 (11%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
+ F ++H++K LV LG YLL K R + + E + I + + + H
Sbjct: 5 LWSFLKRHKKKCLVLGTFLGGVYLLGKYGQKKIREIQERE-------AAEYIAQARRQYH 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
FES Q + T L P L +++ E S + +R P KL++W++LK
Sbjct: 58 FESNQRTCNMTVLSMLPTLRDALMHQLNSESLTSLLKNR---------PANKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L + +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVCKNG----TTPLAPPEVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP-- 238
LSS L+ + + LI+ ++ + +V LK ++ L++ + +I DV S
Sbjct: 165 LSSIQHLLGDGLTELITIVKQAVHKVFGSISLKHALSLLELEQKLKEIRDVVEHRDSDQV 224
Query: 239 ---HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCF 295
YLM ++ L+ ++ + +L+ ETR++L S +F+ ++ L
Sbjct: 225 APYSPLCHYLMPDEENPLATQACGLTERDTATI-KLLNETRDMLESPDFSTVLSTCLNRG 283
Query: 296 TDVLVEEM---ETQTEAGGLATG---------KPLAKVLPQIEKTMNVITAEPSKNRFLQ 343
L++ M TE G PLAK++P I ++ I +E + + F+Q
Sbjct: 284 FSQLLDNMAEFFRPTEQDFSQNGSVNSLSSVSLPLAKIIPIINGQIHSICSE-TPSHFVQ 342
Query: 344 IIRDLPEVKLFFTLLYANMP 363
+ + ++K F +Y
Sbjct: 343 DLLMMEQMKDFAANVYEAFS 362
>ref|NP_956522.1| peroxisomal biogenesis factor 3 [Danio rerio]
gb|AAH46066.1| Peroxisomal biogenesis factor 3 [Danio rerio]
Length = 364
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 90/373 (24%), Positives = 171/373 (45%), Gaps = 33/373 (8%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
F ++H+RK + T +G YLL K + + + E + I + + + H
Sbjct: 5 TWNFIKRHKRKFIFTGVFVGGVYLLGKYAQRKIQEMQERE-------AAEYIAQARRQFH 57
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
FES Q + T L + L I ++ + L P KL++W++LKI+S
Sbjct: 58 FESNQRTCNMTVL-SMLPTLREAIIHHLNSESLTTLLKT-----KPANKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G +LY+D + L D +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYLYLDNSVTKNGM-----TPLAPPDVQQQYLSS 166
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVD 243
L+ + LI+ ++ + +EV LK ++ + L++ + QI + S + +
Sbjct: 167 IQHLLGEGLMELITVVKKAVQEVFGLVSLKQSLSLQELEQQLTQIRQLVEDDSSKYKGLS 226
Query: 244 -YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEE 302
Y+M ++ L+ ++ V+ +L+ ETR++L S +F ++ L ++
Sbjct: 227 WYMMPDEENTLASQACGLTENDVTTI-KLLNETRDMLESPDFNIVLHTCLNRGFVRFLDN 285
Query: 303 ME------------TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPE 350
M + T PLAK++P I ++ I +E + F+Q + + +
Sbjct: 286 MAEFFRPPQRDSTPSSTPDQLSHVSLPLAKIIPIINGQIHSICSEI-PSHFVQDLLLIDQ 344
Query: 351 VKLFFTLLYANMP 363
VK F +Y
Sbjct: 345 VKEFAANVYETFS 357
>ref|XP_001331521.1| PREDICTED: hypothetical protein [Danio rerio]
emb|CAI11651.1| novel protein similar to vertebrate peroxisomal biogenesis factor 3
(PEX3) (zgc:56313) [Danio rerio]
Length = 364
Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats.
Identities = 90/373 (24%), Positives = 171/373 (45%), Gaps = 33/373 (8%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
F ++H+RK + T +G YLL K + + + E + I + + + H
Sbjct: 5 TWNFIKRHKRKFIFTGVFVGGVYLLGKYAQRKIQEMQERE-------AAEYIAQARRQFH 57
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
FES Q + T L + L I ++ + L P KL++W++LKI+S
Sbjct: 58 FESNQRTCNMTVL-SMLPTLREAIIHHLNSESLTALLKT-----KPANKLEIWEDLKIIS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G +LY+D + L D +Q++LSS
Sbjct: 112 FTRSIVAVYSTCMLVVLLRVQLNIIGGYLYLDNSVTKNGM-----TPLAPPDVQQQYLSS 166
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVD 243
L+ + LI+ ++ + +EV LK ++ + L++ + QI + S + +
Sbjct: 167 IQHLLGEGLMELITVVKKAVQEVFGLVSLKQSLSLQELEQQLTQIRQLVEDDSSKYKSLS 226
Query: 244 -YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEE 302
Y+M ++ L+ ++ V+ +L+ ETR++L S +F ++ L ++
Sbjct: 227 WYMMPDEENTLASQACGLTENDVTTI-KLLNETRDMLESPDFNIVLHTCLNRGFVRFLDN 285
Query: 303 ME------------TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPE 350
M + T PLAK++P I ++ I +E + F+Q + + +
Sbjct: 286 MAEFFRPPQRDSTPSSTPDQLSHVSLPLAKIIPIINGQIHSICSEI-PSHFVQDLLLIDQ 344
Query: 351 VKLFFTLLYANMP 363
VK F +Y
Sbjct: 345 VKEFAANVYETFS 357
>ref|NP_001039031.1| peroxisomal biogenesis factor 3 [Xenopus tropicalis]
emb|CAJ83967.1| peroxisomal biogenesis factor 3 [Xenopus tropicalis]
gb|AAI54856.1| Peroxisomal biogenesis factor 3 [Xenopus tropicalis]
Length = 369
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 88/380 (23%), Positives = 173/380 (45%), Gaps = 43/380 (11%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
F ++H++K + G YLL K R + + E + I + + + HF
Sbjct: 5 WNFLKRHKKKFIFVGAVAGGVYLLGKYAQRKIREIQERE-------AAEYIAQARRQYHF 57
Query: 65 ESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKI 121
ES Q + T L P + L +++ E S + ++ P KL++W++LKI
Sbjct: 58 ESNQRTCNMTVLSMLPALREGLMQQLNSESLTSLLKNK---------PSNKLEIWEDLKI 108
Query: 122 LSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFL 181
+SF+R +++++S ML + +RVQ+NI+G ++Y+D + + L+ + +Q++L
Sbjct: 109 ISFSRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNSSLTKNGTTLQ----ASPEVQQQYL 164
Query: 182 SSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF--------- 232
SS L+ + + LI+ ++ + + VL LK + L++ + +I +
Sbjct: 165 SSIQHLLGDGLSELITVVKQAVQGVLGSFSLKHCFSLTELEQKIKEIRSLVEKKKGSLNG 224
Query: 233 MSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
+ S YLM ++ L+ +++ V L+ ETR++L S +F ++ L
Sbjct: 225 EESDSKSKLCQYLMPDEENPLTTQAYGLTEKDVLTIR-LLNETRDMLESEDFKTVLNSCL 283
Query: 293 KCFTDVLVEEM---------ETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQ 343
L++ E + + PLAK++P I ++ I +E N F+Q
Sbjct: 284 SRGFGRLLDSTAEFFRPTDREMNQDNTLHSISLPLAKIIPIINGQIHSICSE-MPNHFVQ 342
Query: 344 IIRDLPEVKLFFTLLYANMP 363
+ + +VK F +Y
Sbjct: 343 DLLLMEQVKNFAANVYEAFS 362
>ref|NP_001085641.1| MGC82731 protein [Xenopus laevis]
gb|AAH73069.1| MGC82731 protein [Xenopus laevis]
Length = 372
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 90/383 (23%), Positives = 176/383 (45%), Gaps = 46/383 (12%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
F ++H++K + GS YLL K R + + E + I + + + HF
Sbjct: 5 WNFLKRHKKKFIFVGAFAGSVYLLGKYAQRKIREIQERE-------AAEYIAQARRQYHF 57
Query: 65 ESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKI 121
ES Q + T L P + L +++ E S + ++ P KL +W++LKI
Sbjct: 58 ESNQRTCNMTVLSMLPALREALMQQLNSESLTSLLKNK---------PSNKLDIWEDLKI 108
Query: 122 LSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFL 181
+SF+R +++++S ML + +RVQ+NI+G ++Y+D + + L+ + +Q++L
Sbjct: 109 ISFSRSIVAIYSTCMLVVLLRVQLNIIGGYIYLDNSSVTKNGTALQ----ASPEVQQQYL 164
Query: 182 SSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF--------- 232
SS L+ + + LI+ ++ + +EVL LK + L++ + +I +
Sbjct: 165 SSIQHLLGDGLTELITVVKQAVQEVLGSFSLKHSFSLIELEQKIKEIRSLVEKKRGSLNG 224
Query: 233 MSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
+ YLM ++ L+ +++ V L+ ETR++L S +F ++ L
Sbjct: 225 EESDGKVRLCQYLMSDEENPLTTQAYGLTEKDVKTIR-LLNETRDMLESEDFNTVLNSCL 283
Query: 293 KCFTDVLVE-----------EMETQTEAGGLAT-GKPLAKVLPQIEKTMNVITAEPSKNR 340
L++ E++ L++ PLAK++P I ++ I +E N
Sbjct: 284 SRGFGRLLDSTAEFFRPADQELKQHNTMHSLSSISLPLAKIIPIINGQIHSICSE-LPNH 342
Query: 341 FLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 FVQDLLLMEQVKDFAANVYEAFS 365
>gb|EDL03499.1| peroxisomal biogenesis factor 3, isoform CRA_a [Mus musculus]
Length = 365
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 87/380 (22%), Positives = 172/380 (45%), Gaps = 47/380 (12%)
Query: 9 RKHRRKVLVTAGCLG--SGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
R+HR G Y+L K R + + E + I + + + HFES
Sbjct: 1 RRHRAAAGGPGQVDGRHGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYHFES 53
Query: 67 IQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
Q + T L P + L +++ E + + R P KL++W++LKI+S
Sbjct: 54 NQRTCNMTVLSMLPTLREALMQQLNSESLTALLKSR---------PSNKLEIWEDLKIIS 104
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++LSS
Sbjct: 105 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TTILAPPDVQQQYLSS 160
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP----- 238
L+ + + L++ ++ + + +L LK ++ L++ + +I + S
Sbjct: 161 IQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWNDKD 220
Query: 239 ---HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCF 295
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 221 VSRSSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLLNETRDMLESPDFSTVLNTCLNRG 279
Query: 296 TDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRFLQ 343
L++ M E + G + PLAK++P + ++ + +E + + F+Q
Sbjct: 280 FSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSHFVQ 338
Query: 344 IIRDLPEVKLFFTLLYANMP 363
+ + +VK F +Y
Sbjct: 339 DLLMMEQVKDFAANVYEAFS 358
>ref|XP_001507262.1| PREDICTED: similar to peroxisomal biogenesis factor 3
[Ornithorhynchus anatinus]
Length = 360
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 87/362 (24%), Positives = 170/362 (46%), Gaps = 42/362 (11%)
Query: 24 SGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFESIQMIVDSTTLPHAMQFL 83
YLL K + + + E + I + + + HFES Q + T L + L
Sbjct: 12 GVYLLGKYGQKKIKEIQERE-------AAEYIAQARRQYHFESNQRTCNMTVL-SMLPAL 63
Query: 84 SIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRV 143
+ ++++ + L P KL++WD+LKI+SFTR +++++S ML + +RV
Sbjct: 64 RDALMQQLNSESLTALLKS-----RPSNKLEIWDDLKIISFTRSIVAVYSTCMLVVLLRV 118
Query: 144 QVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSA 203
Q+NI+G ++Y+D A + +L L D +Q++LSS L+ + + LI+ ++ +
Sbjct: 119 QLNIIGGYIYLDNAAVGKNGTML----LAPPDVQQQYLSSIHHLLGDGLTELITVVKQAV 174
Query: 204 EEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVD----------YLMMPQDTKL 253
+++L LK ++ L++ V +I + P WVD Y+M ++T L
Sbjct: 175 QKILGSVSLKHSMSLLDLEQKVKEIRKITEE-QKPPSWVDTTGPRSLLCHYMMPDEETPL 233
Query: 254 SRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEME--------- 304
+ + V+ +L+ ETR++L S +F+ ++ L L++ M
Sbjct: 234 ATQACGLTAGDVTTI-KLLNETRDMLESPDFSTVLNTCLNRGFSRLLDNMAEFFRPTEQD 292
Query: 305 ---TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYAN 361
+ + PLAK++P I ++ + +E + + F+Q + + +VK F +Y
Sbjct: 293 LQRKDSMNSLSSVSLPLAKIIPIINGQVHAVCSE-TPSHFVQDLLMMEQVKDFAANVYEA 351
Query: 362 MP 363
Sbjct: 352 FS 353
>ref|NP_001062839.1| Os09g0314300 [Oryza sativa (japonica cultivar-group)]
dbj|BAD33995.1| peroxisomal biogenesis factor 3-like [Oryza sativa Japonica Group]
dbj|BAF24753.1| Os09g0314300 [Oryza sativa (japonica cultivar-group)]
Length = 380
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 167/373 (44%), Positives = 240/373 (64%), Gaps = 15/373 (4%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
RGFW +HRRK+LV+ G G+GY Y+ +SH R+L +E+ ER +EIIK Q++ HF
Sbjct: 6 RGFWGRHRRKILVSLGVAGAGYAAYRYLDSHRRQLVRVEQRALEERAAEEIIKNQLQTHF 65
Query: 65 ESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGM-----LSPPEKLQLWDEL 119
E++Q I D+TTLP AM +L RI EE+D+SH+ ++L GKG L+P EK W+++
Sbjct: 66 ENVQKISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDTWEKI 125
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQK 179
KILSFTR V S+W++T+LSLY+RVQV ILGRHLY+D AR + L E D + +
Sbjct: 126 KILSFTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQLQEGSDTFSKSGHKD 185
Query: 180 FLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPH 239
FL++AD+L T + +LI+ MQ +A E+LK KQLKD + + ET++QI+ FM +
Sbjct: 186 FLATADYLATYGINALITKMQHAATEILKEKQLKDPMGIDEVLETILQILKQFMGLCEDN 245
Query: 240 HWVDYLMMPQD----TKLSRTTSDSSDE-----AVSKFHQLMVETREVLISTEFTNIVEI 290
W++Y ++P++ +L +S D+ V K QLM ETR VL S +F NI++
Sbjct: 246 SWINY-LVPENANVYAQLMAVSSSGFDDSSLLKDVRKLDQLMSETRIVLSSDDFRNIMDR 304
Query: 291 SLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPE 350
SLK V+VE++ Q A G PLAK+L ++ + + EP KN+ +QIIR +PE
Sbjct: 305 SLKKIASVVVEDLAVQIGAPIPPPGLPLAKLLAKVAQLSLPLLEEPDKNKHIQIIRSMPE 364
Query: 351 VKLFFTLLYANMP 363
V+LF+T LYANMP
Sbjct: 365 VELFYTFLYANMP 377
>ref|XP_001497293.1| PREDICTED: similar to peroxisomal biogenesis factor 3 [Equus
caballus]
Length = 481
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 89/372 (23%), Positives = 173/372 (46%), Gaps = 57/372 (15%)
Query: 8 WRKHRRKVLVT--AG---CLGSG------YLLYKLYNSHTRRLADLERELAHERENDEII 56
W+ R K L AG +G G Y+L K R + + E + I
Sbjct: 131 WKSRREKALAGCCAGALRIVGIGTAPARVYILGKYGQKKIREMQERE-------AAEYIA 183
Query: 57 KTQMKAHFESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKL 113
+ + + HFES Q + T L P + L +++ E + + +R P KL
Sbjct: 184 QARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNR---------PSNKL 234
Query: 114 QLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLID 173
++W++LKI+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L
Sbjct: 235 EIWEDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTVLAP 290
Query: 174 RDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFM 233
D +Q++LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++
Sbjct: 291 PDVQQQYLSSIQHLLGDGLTELITVIKQAVQKILGSISLKHSLSLLDLEQKLKEIRNLVE 350
Query: 234 S---------TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEF 284
GS Y+M ++T L+ S V+ +L+ ETR++L S +F
Sbjct: 351 QHKSSSWINKDGSKSLLCHYMMPDEETPLAVQAYGLSPRDVTTI-KLLNETRDMLESPDF 409
Query: 285 TNIVEISLKCFTDVLVEEME-------TQTEAG-----GLATGKPLAKVLPQIEKTMNVI 332
+ ++ L L++ M + G + PLAK++P + ++ +
Sbjct: 410 STVLSTCLNRGFSRLLDNMAEFFRPTDQDLQQGSSMDSLSSVSLPLAKIIPIVNGQIHSV 469
Query: 333 TAEPSKNRFLQI 344
+E + + F+Q+
Sbjct: 470 CSE-TPSHFVQV 480
>ref|XP_001176855.1| PREDICTED: similar to peroxisomal biogenesis factor 3
[Strongylocentrotus purpuratus]
Length = 388
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 93/378 (24%), Positives = 178/378 (47%), Gaps = 34/378 (8%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
+ F ++HRRK LV G LLYK + + E E + + + H
Sbjct: 5 IWNFVKRHRRKFLVLGAVAGGASLLYKYAEWKLKEWRETE-------EAECLAMARRAHH 57
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
FES Q + T L + L + ++ ++ +L G K+ +W+ELK++S
Sbjct: 58 FESNQRTCNMTVL-SMIPKLRELLLYHLNSEELIQKLKSGT-----ENKVVVWNELKVVS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTRMV+S++S +L+ ++RVQ+NILG ++Y+DT G + L +D ++++L+
Sbjct: 112 FTRMVVSVYSTVLLTAFLRVQLNILGGYMYLDTLA--GKNGLTYYQVHATQDVQKEYLAM 169
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIV----------DVFM 233
+L+T+ + LI+ +Q + V+ L+ +++ ++E + ++ +V +
Sbjct: 170 VQYLLTDGLTELINHVQEVVQNVVGSISLQQLLSLSDMEEIIAKVRGQVETTQYGGEVVV 229
Query: 234 STGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK 293
S H YL+ P+ + SD+ + Q+ +ETR+++ S +F+ ++ L
Sbjct: 230 PDCSIHPLGRYLLKPEGLDGEESACRLSDDQLV-LSQMQIETRDLVESHDFSCVMNSCLD 288
Query: 294 CFTDVLVEEME-----TQTEAGGLATGKPL--AKVLPQIEKTMNVITAEPSKNRFLQIIR 346
L++ M T G G L AK +P + +N + + + N F+Q +
Sbjct: 289 IGFSRLLDNMAEFFRPVTTRNGESPCGLKLAMAKAIPIVNGQVNALCCD-TPNHFIQELL 347
Query: 347 DLPEVKLFFTLLYANMPQ 364
+ VK F + +Y Q
Sbjct: 348 LMQCVKDFASNVYEGFSQ 365
>ref|XP_780894.2| PREDICTED: similar to peroxisomal biogenesis factor 3
[Strongylocentrotus purpuratus]
Length = 388
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 93/378 (24%), Positives = 178/378 (47%), Gaps = 34/378 (8%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
+ F ++HRRK LV G LLYK + + E E + + + H
Sbjct: 5 IWNFVKRHRRKFLVLGAVAGGASLLYKYAEWKLKEWRETE-------EAECLAMARRAHH 57
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
FES Q + T L + L + ++ ++ +L G K+ +W+ELK++S
Sbjct: 58 FESNQRTCNMTVL-SMIPKLRELLLYHLNSEELIQKLKSGT-----ENKVVVWNELKVVS 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTRMV+S++S +L+ ++RVQ+NILG ++Y+DT G + L +D ++++L+
Sbjct: 112 FTRMVVSVYSTVLLTAFLRVQLNILGGYMYLDTLA--GKNGLTYYQVHATQDVQKEYLAM 169
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIV----------DVFM 233
+L+T+ + LI+ +Q + V+ L+ +++ ++E + ++ +V +
Sbjct: 170 VQYLLTDGLTELINHVQEVVQNVVGSISLQQLLSLSDMEEIIAKVRGQVETTQYGGEVVV 229
Query: 234 STGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK 293
S H YL+ P+ + SD+ + Q+ +ETR+++ S +F+ ++ L
Sbjct: 230 PDCSIHPLGRYLLKPEGLDGEESACRLSDDQLV-LSQMQIETRDLVESHDFSCVMNSCLD 288
Query: 294 CFTDVLVEEME-----TQTEAGGLATGKPL--AKVLPQIEKTMNVITAEPSKNRFLQIIR 346
L++ M T G G L AK +P + +N + + + N F+Q +
Sbjct: 289 IGFSRLLDNMAEFFRPVTTRNGESPCGLKLAMAKAIPIVNGQVNALCCD-TPNHFIQELL 347
Query: 347 DLPEVKLFFTLLYANMPQ 364
+ VK F + +Y Q
Sbjct: 348 LMQCVKDFASNVYEGFSQ 365
>gb|EAZ08561.1| hypothetical protein OsI_029793 [Oryza sativa (indica
cultivar-group)]
gb|EAZ44208.1| hypothetical protein OsJ_027691 [Oryza sativa (japonica
cultivar-group)]
Length = 376
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 165/373 (44%), Positives = 237/373 (63%), Gaps = 19/373 (5%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHF 64
RGFW +HRRK+LV+ G G+GY Y+ +SH R+L +E+ ER +EIIK Q++ HF
Sbjct: 6 RGFWGRHRRKILVSLGVAGAGYAAYRYLDSHRRQLVRVEQRALEERAAEEIIKNQLQTHF 65
Query: 65 ESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGM-----LSPPEKLQLWDEL 119
E++Q I D+TTLP AM +L RI EE+D+SH+ ++L GKG L+P EK W+++
Sbjct: 66 ENVQKISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDTWEKI 125
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQK 179
KILSFTR V S+W++T+LSLY+RVQV ILGRHLY+D AR + L E D + +
Sbjct: 126 KILSFTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQLQEGSDTFSKSGHKD 185
Query: 180 FLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPH 239
FL++AD+L T + +LI+ MQ +A E+LK KQLKD + + ET++QI+ FM +
Sbjct: 186 FLATADYLATYGINALITKMQHAATEILKEKQLKDPMGIDEVLETILQILKQFMGLCEDN 245
Query: 240 HWVDYLMMPQD----TKLSRTTSDSSDE-----AVSKFHQLMVETREVLISTEFTNIVEI 290
W++Y ++P++ +L +S D+ V K QLM ETR VL NI++
Sbjct: 246 SWINY-LVPENANVYAQLMAVSSSGFDDSSLLKDVRKLDQLMSETRIVLS----RNIMDR 300
Query: 291 SLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPE 350
SLK V+VE++ Q A G PLAK+L ++ + + EP KN+ +QIIR +PE
Sbjct: 301 SLKKIASVVVEDLAVQIGAPIPPPGLPLAKLLAKVAQLSLPLLEEPDKNKHIQIIRSMPE 360
Query: 351 VKLFFTLLYANMP 363
V+LF+T LYANMP
Sbjct: 361 VELFYTFLYANMP 373
>ref|NP_974332.1| PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana]
Length = 304
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 230/310 (74%), Positives = 266/310 (85%), Gaps = 6/310 (1%)
Query: 55 IIKTQMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQ 114
++ +MKAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQ
Sbjct: 1 MLYVRMKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQ 60
Query: 115 LWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDR 174
LW+ELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSHLL+E+DLI+R
Sbjct: 61 LWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIER 120
Query: 175 DDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS 234
DDEQKFL+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMS
Sbjct: 121 DDEQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMS 180
Query: 235 TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKC 294
TGSPHHWVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N+ EISLKC
Sbjct: 181 TGSPHHWVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKC 237
Query: 295 FTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLF 354
LVEEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLF
Sbjct: 238 CAVALVEEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLF 294
Query: 355 FTLLYANMPQ 364
FTLLYANMPQ
Sbjct: 295 FTLLYANMPQ 304
>ref|XP_001769437.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ65806.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 370 bits (952), Expect = e-101, Method: Composition-based stats.
Identities = 130/380 (34%), Positives = 205/380 (53%), Gaps = 25/380 (6%)
Query: 5 RGFWRKHRRKVLVTAGCLGSG----YLLYKL-YNSHTRRLADLERELAHERENDEIIKTQ 59
+ + +KH+R +LV AG +G G Y L+ L S R+ D R RE +E + Q
Sbjct: 14 KAWVKKHQRSLLVAAGLVGGGSAVYYGLHYLGLTSQARKERDAARAALLHREAEERAEAQ 73
Query: 60 MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGK---GMLSPPEKLQLW 116
+++HFESIQ I D+TTLP + L + ++D+S + ++L GK LS +K+QLW
Sbjct: 74 LQSHFESIQRISDTTTLPSVLPQLKASLFSKVDLSGLTEKLILGKDDPQALSQRDKMQLW 133
Query: 117 DELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDD 176
ELK LSFTR V ++ ++++L L+IR+Q+NILGR +Y DTAR + L +
Sbjct: 134 QELKTLSFTRTVCAMSALSLLDLFIRIQLNILGRRVYFDTARDFMNPEDLHAP--LSMSV 191
Query: 177 EQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTG 236
+ KF++ A +L + +L+ D+ +AE L+GKQLK+ T L+ ++I+ S
Sbjct: 192 QHKFIAFAGYLHHKGLAALVGDIYKAAEIELRGKQLKESFTLYDLKNVFVRILATLDSKR 251
Query: 237 SPHHWVDYLMMPQDTKLSRT---------TSDSSDEAVSK---FHQLMVETREVLISTEF 284
WV Y++ P + ++ +D A S QLM ETR VL S EF
Sbjct: 252 PA--WVQYVLPPDNVLPEDLAGASSAADASNQFADVATSDNEVLDQLMNETRAVLASNEF 309
Query: 285 TNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQI 344
+ + L+ D ++EE+ T G +G PLAK+LP + + + P +NRF++I
Sbjct: 310 HEVQAVCLEVMLDGVMEELYT-IYRGSSDSGIPLAKLLPPVAGAGSTLLEHPDENRFIRI 368
Query: 345 IRDLPEVKLFFTLLYANMPQ 364
+ LP+V F L+Y N +
Sbjct: 369 LASLPQVHAFCALVYTNSSE 388
>ref|XP_001753372.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ81595.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 399
Score = 361 bits (927), Expect = 5e-98, Method: Composition-based stats.
Identities = 124/381 (32%), Positives = 204/381 (53%), Gaps = 26/381 (6%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYN-----SHTRRLADLERELAHERENDEIIKT 58
++ + +K+RR +L+ AG +G G +Y S +R+ D R ++E +E +
Sbjct: 13 LKAWVKKYRRSLLIAAGLVGGGTAIYYGVQYLGLDSQSRKERDAARVALVQKEAEERAEV 72
Query: 59 QMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGK---GMLSPPEKLQL 115
Q+++HFE IQ I DSTTLP + L + ++D+ + D+L K +LS +K+QL
Sbjct: 73 QLQSHFEGIQRISDSTTLPSVLPHLKASLYSKVDLEGLTDKLMLCKVDPQLLSHRDKMQL 132
Query: 116 WDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRD 175
W ELK SF R V ++ +V++L L+IR+Q+NILGR +Y DTAR + +S + +
Sbjct: 133 WQELKTRSFARTVCAMTAVSLLDLFIRIQLNILGRRVYFDTARNMMNSE--DSHVPLSMS 190
Query: 176 DEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST 235
+ KF++ A +L + +L++D E VL+GKQLK+ T L++ M+I S
Sbjct: 191 VQHKFIAFAGYLHHKGLATLVADTYKVVEIVLRGKQLKEPYTIDELRDVFMKIRASLDSR 250
Query: 236 GSPHHWVDYLMMPQDT------------KLSRTTSDSSDEAVSKFHQLMVETREVLISTE 283
SP WV Y++ P++ + + SD + E QLM ETR V+ S E
Sbjct: 251 RSP--WVQYVLPPENVLPDEFVATSSAADAAASVSDMTHEDDV-LAQLMNETRAVVSSDE 307
Query: 284 FTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQ 343
F ++ + L D ++EE+ T G PLA++LP + + + P +NRF+
Sbjct: 308 FNEVLAVCLDAILDGVMEELYT-IYRGSPDNSIPLARMLPPVAGAGSTLLEHPDENRFIS 366
Query: 344 IIRDLPEVKLFFTLLYANMPQ 364
I+ +LP+V F L+Y N +
Sbjct: 367 ILANLPQVHAFCALVYTNSSE 387
>ref|XP_001755103.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ80047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats.
Identities = 130/380 (34%), Positives = 208/380 (54%), Gaps = 24/380 (6%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSG---YLLYKLY--NSHTRRLADLERELAHERENDEIIKT 58
++ + +KHRR +LV AG +G G Y ++ S R+ D+ R +RE +E +
Sbjct: 13 LKAWAKKHRRSLLVAAGLVGGGAAVYYGFRYLGLASQARKERDVARAALLQREAEERAEA 72
Query: 59 QMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGK---GMLSPPEKLQL 115
Q+++HFESIQ I D+TTLP + L R+ ++D+S + ++L GK LS EK+QL
Sbjct: 73 QLQSHFESIQRISDTTTLPSMLPQLKDRLFSKVDLSGLTEKLILGKEDPQSLSQREKMQL 132
Query: 116 WDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRD 175
W ELK LSF R V ++ ++++L L+IR+Q+NILGRH+Y DTAR + + +
Sbjct: 133 WQELKTLSFVRTVCAMSALSLLDLFIRIQLNILGRHVYFDTARDFMNPE--DSHVPLSMS 190
Query: 176 DEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST 235
+ KF++ A +L + +L+ D+ +AE VL+ K LK+ T L++ M+I S
Sbjct: 191 VQHKFIAYAGYLHHKGLDALVGDVNQAAEIVLRSKPLKEPYTLDDLRDVFMRIRATLDSK 250
Query: 236 GSPHHWVDYLMMPQDT---KLSRTTSDSSDEAVSK--------FHQLMVETREVLISTEF 284
S WV Y++ P + LS +S + V++ QLM ETR VL+S EF
Sbjct: 251 RSA--WVQYVLPPDNVLPDDLSVASSADASNPVAEMALNDNEVLDQLMNETRAVLVSNEF 308
Query: 285 TNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQI 344
++ + + D ++EE+ G G PLAK+LP + + + NRF++I
Sbjct: 309 HEVMAVCVDSMLDGVMEELYA-IYRGSSDNGIPLAKLLPPVAGAGSALLESLDDNRFIRI 367
Query: 345 IRDLPEVKLFFTLLYANMPQ 364
+ DLP+V F L+Y N +
Sbjct: 368 LADLPQVHAFCALVYTNSSE 387
>ref|XP_001172297.1| PREDICTED: similar to Pex3 protein isoform 1 [Pan troglodytes]
Length = 329
Score = 353 bits (907), Expect = 1e-95, Method: Composition-based stats.
Identities = 79/381 (20%), Positives = 163/381 (42%), Gaps = 84/381 (22%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
V F ++H++K + LG +L
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGVLSML----------------------------------- 29
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
P + L +++ E + + +R P KL++W++LKI+S
Sbjct: 30 -------------PTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLKIIS 67
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
FTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++LSS
Sbjct: 68 FTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTILAPPDVQQQYLSS 123
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS--------- 234
L+ + + LI+ ++ + +++L LK ++ L++ + +I ++
Sbjct: 124 IQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSWINK 183
Query: 235 TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKC 294
GS Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 184 DGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNTCLNR 242
Query: 295 FTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRFL 342
L++ M E + G + PLAK++P + ++ + +E + + F+
Sbjct: 243 GFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSHFV 301
Query: 343 QIIRDLPEVKLFFTLLYANMP 363
Q + + +VK F +Y
Sbjct: 302 QDLLTMEQVKDFAANVYEAFS 322
>ref|XP_001635320.1| predicted protein [Nematostella vectensis]
gb|EDO43257.1| predicted protein [Nematostella vectensis]
Length = 380
Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats.
Identities = 84/388 (21%), Positives = 169/388 (43%), Gaps = 40/388 (10%)
Query: 2 DFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMK 61
+ ++GF+R+H+RK +V + Y++ + E +E + I + + +
Sbjct: 3 ESIKGFFRRHKRKFVVGGIVITGIYIVSRYARWRL-------DEWRANQELEYIAQARKQ 55
Query: 62 AHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKI 121
HFES Q TL + L + ++++ + +L + P KL+LW+ LK
Sbjct: 56 HHFESNQRTCS-VTLYSLIPSLRDSLLDKLNTEEITAKLRE-----KPANKLELWESLKT 109
Query: 122 LSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFL 181
LSF R V +++S ML +++RVQ+N++G ++Y+D+ + + ++K+L
Sbjct: 110 LSFARTVTAVYSSCMLFVFLRVQLNVIGGYMYLDSLVTPVEGGSNGKRKHVAEGMQKKYL 169
Query: 182 SSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFM-----STG 236
+ +L++ + + ++ S E++L LKD +T LQ + I F S+
Sbjct: 170 ALVKYLLSEGLDKMTDTIKRSTEDILSDISLKDKLTHAELQRLINHIRQTFEFSQQTSSS 229
Query: 237 -----------SPHHWVDYLMMPQDTKLSRTTSDSSDEAV--SKFHQLMVETREVLISTE 283
S M+P+D +++ V +F +L+ ET +VL S +
Sbjct: 230 MRSSQTGSTPLSSTRPFCQFMVPEDMAALDGRGETAVGGVEGEEFMRLVEETLDVLESED 289
Query: 284 FTNIVEISLKCFTDVLVEE---METQTEAGGL-----ATGKPLAKVLPQIEKTMNVITAE 335
+ +++ L ++ E G A PLAK++P + + + ++
Sbjct: 290 CSAVLQGCLDVAFAHILGNIAPFFQAEELGMSFKYLLAVSLPLAKIIPIVNGQIYHMFSD 349
Query: 336 PSKNRFLQIIRDLPEVKLFFTLLYANMP 363
S N +LQ + + F +Y
Sbjct: 350 -SDNSYLQDLFKVRFAGEFAANVYEAFS 376
>ref|XP_369909.2| hypothetical protein MGG_06424 [Magnaporthe grisea 70-15]
gb|EDK00651.1| hypothetical protein MGG_06424 [Magnaporthe grisea 70-15]
Length = 455
Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 79/413 (19%), Positives = 156/413 (37%), Gaps = 59/413 (14%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLEREL-------------AHER 50
R + R++R + V AG +G+GYL+ +L + D + A +
Sbjct: 5 TRRWLRRNRTPIAVGAGVIGAGYLVSRLRRRFEQNQEDCTFTVLALLPTATQNVLEAMDT 64
Query: 51 ENDEIIKTQMKAHFESIQMIVDSTTLPHAMQFLSIR--ISEEIDVSH---VMDRLNQGKG 105
E Q+KA I D+T + +S S +
Sbjct: 65 EKITYEIQQLKARPAGPPSIADTTLTEDDGRSVSASGPASSALATESDPQPQAAEAAAPA 124
Query: 106 MLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHL 165
S K QLWD+L I S R L+ + +L++ R+Q+N+LGR Y+ + L +
Sbjct: 125 NASRKTKRQLWDDLAISSIARAFTLLYVLALLTMLTRIQLNLLGRRSYLSSVITLATGSA 184
Query: 166 LEEVDLIDRDDE-------------QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQL 212
+ L + DD+ +++L+ + +L+ L ++ +
Sbjct: 185 QASIGLENNDDDSPDVVYGSDFDVNRRYLTFSWWLLNKGWAELRDRVEVAVRGAFGHLSP 244
Query: 213 KDVITTRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDS------------ 260
+D ++ + Q+ D + W+ +L+ P+D + S
Sbjct: 245 RDELSLDMFGRLTKQVRDEVEAD---VKWLAFLLPPRDQEDSVLAESGILGESETAAGAD 301
Query: 261 ---------SDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEMETQTEAGG 311
S +L+ ET +++ S F++++ L L+E Q+ G
Sbjct: 302 GSMIVVQSQSPVVPPPLRRLLDETSDIIDSPAFSHVLAKILDAGFSTLMEGELAQSVFGS 361
Query: 312 LATGKP---LAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYAN 361
KP L KVL + + + + N++LQ + + E++ F ++Y++
Sbjct: 362 GGVPKPTVQLPKVLSCLTRQAHAV-GNGMPNKYLQAMETVRELEGFAAVVYSS 413
>ref|XP_001218024.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gb|EAU30539.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 525
Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 77/456 (16%), Positives = 172/456 (37%), Gaps = 98/456 (21%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADL--ERELAHERENDEIIKTQMK 61
R ++R++R+ + + AG +G+GYL + S + +A E + Q
Sbjct: 5 TRRWFRRNRKPLAIGAGVIGAGYLAGQYVLSKISEARERMSSDRIARENLRRRFEQNQTD 64
Query: 62 AHF-------------------------------ESIQMIVDSTTLPHAMQFLSIRISEE 90
+ E + + + M L+ ++EE
Sbjct: 65 CTYTVLALLPTAAEDILEALPVEELTKELQKKRAERLARLNAAEGTGSDMTSLAPSLTEE 124
Query: 91 -------------IDVSHVMDRLNQGKGMLSPP-EKLQLWDELKILSFTRMVLSLWSVTM 136
+ S + + + P K QLW+E+KI S TR ++++++
Sbjct: 125 DRRSLSSFQSEGFVRTSQLTEAPGENDAESRPKKNKTQLWNEVKITSITRSFTLIYTLSL 184
Query: 137 LSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDE-------------QKFLSS 183
L+++ R+Q+N+LGR Y+ + +L + + L D DD+ +++L+
Sbjct: 185 LTIFTRIQLNLLGRRNYLSSVISLATPADASTIRLEDHDDDDLTQTLGNDFETNRRYLAF 244
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP----H 239
+ +L+ +L+ ++Q + EE ++ I+ L + +++
Sbjct: 245 SWWLLHCGWKNLMKEVQAAVEETFGPLNPREDISLGRLSDLTLEVRKRVEGATEEDRKHR 304
Query: 240 HWVDYLMMP--------QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
W+ YL+ P +++ + T S+ + + L+ ET +++ S FT I+ +
Sbjct: 305 KWLSYLLPPREEEDKLLEESGVLGVTEPSTSQTATTLRHLLDETADLIDSPTFTRIMMLL 364
Query: 292 LKCFTDVLVEEMETQ------------------------TEAGGLATGKPLAKVLPQIEK 327
+ L+++ A G LA VL + +
Sbjct: 365 NNECFETLIQQCTADAFKASPMRAPETDPQSFSSVATVVPGADGSEPKTKLANVLAVMAR 424
Query: 328 TMNVI-TAEPSKNRFLQIIRD-LPEVKLFFTLLYAN 361
+VI N ++ + + E++ F ++Y++
Sbjct: 425 QAHVIGNGTNPPNLYVTAMDQGVRELEAFAAVMYSS 460
>ref|XP_001817054.1| hypothetical protein [Aspergillus oryzae RIB40]
dbj|BAE55052.1| unnamed protein product [Aspergillus oryzae]
Length = 531
Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats.
Identities = 87/464 (18%), Positives = 177/464 (38%), Gaps = 114/464 (24%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHER-ENDEIIKTQMKA 62
R ++R++R+ + + AG +G+GYL + S A ER +D I + ++
Sbjct: 5 TRRWFRRNRKGLAIGAGMIGAGYLAGQYVLSKISE--------ARERMSSDRIARENLRR 56
Query: 63 HFESIQMIVDSTTLPHAMQF----LSIRISEEI-----------------------DVSH 95
FE Q T L L EE+ D+S
Sbjct: 57 RFEQNQTDCTYTVLALLPTAAEDILDALPVEELTKELQRKRAERLARLNAGEGTGSDLSS 116
Query: 96 VMDRL--------------------------NQGKGMLSPP-EKLQLWDELKILSFTRMV 128
V L +G G P K QLW+E+KI S TR
Sbjct: 117 VSPSLPEDDRRSLSSFQSDGFVRTSQPGEPFVEGDGEARPKRNKTQLWNEVKITSITRSF 176
Query: 129 LSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEE-VDLIDRDDE---------- 177
++++++L+++ R+Q+N+LGR Y+ + ++ + E + L D DD+
Sbjct: 177 TLVYTLSLLTIFTRIQLNLLGRRNYLSSVISMATPPANESTIRLEDHDDDDLTQTLGNDF 236
Query: 178 ---QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS 234
+++L+ + +L+ L++++Q + EV ++ I+ L E +++
Sbjct: 237 ETNRRYLAFSWWLLHRGWKQLMNEVQTAVTEVFGPLNPREDISLARLSELFLEVRKRVEG 296
Query: 235 TGSPH----HWVDYLMMP--------QDTKLSRTTSDSSDEAVSKFHQLMVETREVLIST 282
W+ YL+ P +++ + T ++ + + L+ ET +++ S
Sbjct: 297 YTEEERKHRKWLSYLLPPREEEDKVLEESGVLGVTELANSQTAATLRHLLDETADLIESP 356
Query: 283 EFTNIVEISLKCFTDVLVEEM--------------------ETQTEAGGLATGKP---LA 319
FT ++ + L+ + T G + +P LA
Sbjct: 357 TFTRVLMLLNNECFQTLIHQCTADAFKSTSQTPRSVPQSFTSVATVVPGADSSEPKAKLA 416
Query: 320 KVLPQIEKTMNVI-TAEPSKNRFLQIIRD-LPEVKLFFTLLYAN 361
+L + + +VI N +L + + E++ F ++Y++
Sbjct: 417 NILAVLARQAHVIGNGTNPPNLYLTAMDQGVRELEAFAAVVYSS 460
>ref|XP_659885.1| hypothetical protein AN2281.2 [Aspergillus nidulans FGSC A4]
gb|EAA64392.1| hypothetical protein AN2281.2 [Aspergillus nidulans FGSC A4]
Length = 530
Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats.
Identities = 84/457 (18%), Positives = 171/457 (37%), Gaps = 107/457 (23%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHER-ENDEIIKTQMKA 62
R ++R++R+ + + G +G GYL + A ER +D I + ++
Sbjct: 5 TRRWFRRNRKTLAIGTGVIGVGYLAGQYVLGKISE--------ARERMSSDRIARENLRR 56
Query: 63 HFESIQMIVDSTTL---------------------------------------------- 76
FE Q T L
Sbjct: 57 RFEQNQTDCTYTVLALLPTAAEDILEALPVEELTKELQKKRAERLARLNAGEGTATGSDM 116
Query: 77 ----PHAMQFLSIRISEE--IDVSHVMDRLNQGKGMLSPPEKLQLWDELKILSFTRMVLS 130
P ++ +S E + S + D K QLW+E+KI S TR
Sbjct: 117 SSVAPSLLEDDRKSVSSESFLRTSQLGDSAVDEDASQPKRNKTQLWNEVKITSITRAFTL 176
Query: 131 LWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDE------------Q 178
++++++L+++ RVQ+N+LGR Y+ + +L + + L D DD+ +
Sbjct: 177 IYTLSLLTIFTRVQLNLLGRRNYLSSVISLATPADSSRITLEDHDDDLTQTLGNDFETNR 236
Query: 179 KFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP 238
++L+ + +L+ L+ +++ + EV +D I+ L E +Q+
Sbjct: 237 RYLAFSWWLLHRGWKQLMEEVKAAVVEVFGPLNPRDDISFDKLSELTLQVRKKIEGATEE 296
Query: 239 H----HWVDYLMMP--------QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTN 286
W+ YL+ P +++ + T S+ + + L+ ET +++ S FT
Sbjct: 297 ERKRRKWLPYLLPPREDEDHLLEESGVLGVTEPSTPQTAATLRHLLDETADLIDSPTFTR 356
Query: 287 IVEISLKCFTDVLVEEMETQT-----------EAGGLATGKP----------LAKVLPQI 325
+ + + L+++ +T +AT P LA VL +
Sbjct: 357 VQMLLNNECFETLIQQCKTDAFKSTGPVTAPQSFTSVATVIPVKENSELKTKLANVLAVL 416
Query: 326 EKTMNVITAEPSKNRFLQIIRD-LPEVKLFFTLLYAN 361
+ + I S N ++ + + E++ F ++Y++
Sbjct: 417 ARQAHAIGNGTSPNIYVNAMDHGVRELEAFAAVVYSS 453
>gb|ABH11414.1| peroxin 3 [Penicillium chrysogenum]
Length = 568
Score = 313 bits (804), Expect = 9e-84, Method: Composition-based stats.
Identities = 86/464 (18%), Positives = 172/464 (37%), Gaps = 114/464 (24%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHER-ENDEIIKTQMKA 62
R +++++R+ + + AG +G+GYL + S A ER +D I + ++
Sbjct: 5 TRRWFQRNRKGLAIGAGVIGAGYLAGQYVLSKISE--------ARERMSSDRIARENLRR 56
Query: 63 HFESIQMIVDSTTLPHAMQF--------LSIRISEE------------------------ 90
FE Q T L +++E
Sbjct: 57 RFEQNQTDCTYTVLALLPTAAENIIDALPVEELTKELQQKRAERLARLNAGEATGSDLSS 116
Query: 91 ---------------------IDVSHVMDRLNQGKGMLSPP-EKLQLWDELKILSFTRMV 128
+ S V D G P K QLW+E+KI S TR
Sbjct: 117 VPPSLPDDDRRSLSSFQSEGYVHASQVGDSSVNSDGQPRPKRNKTQLWNEVKITSVTRSF 176
Query: 129 LSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLL-EEVDLIDRDDE---------- 177
++++++L+++ +Q+N+LGR Y+ + +L + + L D DDE
Sbjct: 177 TMIYTLSLLTIFTHIQLNLLGRRNYLSSVISLATPPANASTIRLEDHDDELTQTLGDDFE 236
Query: 178 --QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST 235
+++L+ + +L+ L+ +Q + EEV ++ I+ L E +QI +
Sbjct: 237 TNRRYLAFSWWLLHRGWKDLMGRVQVAVEEVFGPLNPREDISLAKLSELTLQIRKKVEGS 296
Query: 236 GSPH----HWVDYLMMP--------QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTE 283
W+ L+ P Q++ + SS + SK L+ ET +++ S
Sbjct: 297 TEDERRSQKWLSCLLPPAEEEEHVLQESGVEGVADPSSSQTASKLRHLLDETADLIDSPS 356
Query: 284 FTNIVEISLKCFTDVLVEE--------METQTEAGGLATGKPLAKVLPQIE--------- 326
F+ ++ + L+++ T L + +A V+P
Sbjct: 357 FSLVLTLLNNEGFSTLIDQRCAADAFKAPTSNPEAPLQSFDSVATVVPLAANSERKTKLA 416
Query: 327 -------KTMNVITAEPS-KNRFLQII-RDLPEVKLFFTLLYAN 361
+ +VI N +L + +++ E++ F ++Y++
Sbjct: 417 NLLAVMTRQAHVIGNGAHPPNEYLVAMDQNVRELEAFSAVVYSS 460
>ref|XP_505754.1| YlPEX3 [Yarrowia lipolytica]
sp|Q874C0|PEX3_YARLI Peroxisomal biogenesis factor 3 (Peroxin-3)
gb|AAO33094.1|AF474003_1 Pex3p [Yarrowia lipolytica]
emb|CAG78565.1| YlPEX3 [Yarrowia lipolytica CLIB122]
Length = 431
Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats.
Identities = 82/432 (18%), Positives = 164/432 (37%), Gaps = 81/432 (18%)
Query: 6 GFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHEREND-----EIIKTQM 60
F+R+H++KVL G S YL +++ L+ ER + Q
Sbjct: 2 DFFRRHQKKVLALVGVALSSYLFIDYVKKK---FFEIQGRLSSERTAKQNLRRRFEQNQQ 58
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVS--------------------HVMDRL 100
A F I ++ S T P ++ +I E+ + +
Sbjct: 59 DADFT-IMALLSSLTTPVMERYPVDQIKAELQSKRRPTDRVLALESSTSSSATAQTVPTM 117
Query: 101 NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL 160
G K QLW +LK + +R +++ +L + R+Q+NILGR YV++ AL
Sbjct: 118 TSGATEEGEKSKTQLWQDLKRTTISRAFSLVYADALLIFFTRLQLNILGRRNYVNSVVAL 177
Query: 161 ------------------------------GSSHLLEEVDLIDRDDEQKFLSSADFLVTN 190
GSS E + +D D ++++L+ + +L+
Sbjct: 178 AQQGREGNAEGRVAPSFGDLADMGYFGDLSGSSSFGETI--VDPDLDEQYLTFSWWLLNE 235
Query: 191 AMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETV---MQIVDVFMSTGSPHHWVDYLMM 247
SL ++ + V K + L E + ++D ++ SP +++ L+
Sbjct: 236 GWVSLSERVEEAVRRVWDPVSPKAELGFDELSELIGRTQMLIDRPLNPSSPLNFLSQLLP 295
Query: 248 PQDTKLSRTTSDSSDEAV----SKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEM 303
P++ + + SD A +L+ ET + + S ++E + V ++++
Sbjct: 296 PREQEEYVLAQNPSDTAAPIVGPTLRRLLDETADFIESPNAAEVIERLVHSGLSVFMDKL 355
Query: 304 ETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPS-------------KNRFLQIIRDLPE 350
A +G P VLP + + I A + +N ++ ++ + E
Sbjct: 356 AVTFGATPADSGSPYPVVLPTAKVKLPSILANMARQAGGMAQGSPGVENEYIDVMNQVQE 415
Query: 351 VKLFFTLLYANM 362
+ F ++Y++
Sbjct: 416 LTSFSAVVYSSF 427
>ref|XP_001863328.1| peroxisomal biogenesis factor 3 [Culex pipiens quinquefasciatus]
gb|EDS38398.1| peroxisomal biogenesis factor 3 [Culex pipiens quinquefasciatus]
Length = 382
Score = 301 bits (772), Expect = 5e-80, Method: Composition-based stats.
Identities = 79/356 (22%), Positives = 154/356 (43%), Gaps = 62/356 (17%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEII-KTQMKA 62
V+ F+ +HRRK +VT LGSG L K+ R ER+ EI + +
Sbjct: 5 VKNFFTRHRRKFVVTGIVLGSGVFLIKIIQYKLREF--------QERQAKEIAERFKRMQ 56
Query: 63 HFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKIL 122
H+ES + + T + A +S + + + + ++++L +P KL+LW+ELKIL
Sbjct: 57 HYESTERTCNQTIVGLA-PTVSEKALKNLGTAEILEKLRS-----NPDNKLELWEELKIL 110
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
+F R+V +++ +ML++ ++ Q+N+LG +LY DT ++ + D + +LS
Sbjct: 111 AFARIVTLVYASSMLAVTLKTQINLLGGYLYKDTVE--------QDDKQVTVDIQTTYLS 162
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQI-VDVFMSTGSPHHW 241
+ + + L+ ++ + V++ LK +T + I V + SP
Sbjct: 163 MIQHFMGDGLDELMDTIRKNVTTVMQRYSLKQQLTLADAETLFWSIQVALSSEDNSPTKC 222
Query: 242 VDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVE 301
+ +P++ S ++ ET +VL S E +++ ++ ++V+
Sbjct: 223 IASYTLPKEINRSDL-----------LSKMYDETLDVLESAEVSDVCLSNISNGFSLIVD 271
Query: 302 EM-ETQTEAGGLATG--------------------------KPLAKVLPQIEKTMN 330
++ E EA AT LAK++P + +
Sbjct: 272 KLAEYYAEAEPAATQQNGASTKAALNVVAADCGVSNINNIKISLAKLIPIVNGLSS 327
>ref|XP_387118.1| hypothetical protein FG06942.1 [Gibberella zeae PH-1]
Length = 523
Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats.
Identities = 79/457 (17%), Positives = 172/457 (37%), Gaps = 105/457 (22%)
Query: 5 RGFWRKHRRKVLVTAGCLGSGYL-----LYKLYNSHTRRLADLERELAHERENDEIIKTQ 59
R + R +R + V G +G+GY+ + KL ++ R +D +A E + Q
Sbjct: 6 RRWLRNNRTPIAVGVGVIGAGYVATQYVIGKLNDARERMSSD---RIAKENLRRRFEQNQ 62
Query: 60 MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQG---------------- 103
F + ++ +TT + +I+ EI + G
Sbjct: 63 EDCTFTVLALLPSATT-AIIEAMNTEQITLEIQQMKATKAIKNGGNESAAPPSLADTTLT 121
Query: 104 ----KGMLSPPE------------------------------KLQLWDELKILSFTRMVL 129
K M E K QLWD++ I + TR
Sbjct: 122 EEDGKSMAGQSESGVHPSQIPTSSPFNAGGETNKEAPKLRKTKRQLWDDVTISAVTRSFT 181
Query: 130 SLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDE------------ 177
++++ +L++ RVQ+N+LGR Y+ + AL + + L + DD+
Sbjct: 182 LIYTLALLTMLTRVQLNLLGRRSYLSSVVALATGGQHGTISLENNDDDNTEQAYGSDFDI 241
Query: 178 -QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTG 236
+K+L+ + +L+ L+ ++ + V +D+++ E M++ + +
Sbjct: 242 NRKYLTFSWWLLNKGWKDLMHRVESAVRTVFGSLSPRDLLSFERFSELTMEVRKLVEGST 301
Query: 237 SPHH----WVDYLMMPQDTK---------LSRTTSDSSDEAVSK----FHQLMVETREVL 279
+ W+ +L+ P+D + L T + + + + +L+ ET +++
Sbjct: 302 NEERRKSDWLHFLLPPRDMEDEVIKESGILDETANHDPEHSPAASQAILRRLLDETADLI 361
Query: 280 ISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLAT---------------GKPLAKVLPQ 324
S FT+++ + L L + A+ L K++
Sbjct: 362 ESPSFTHVLTLLLDAGFSYLTDNKLATAAFELPASDGIVTPELKDQQRSKVILLPKIMSV 421
Query: 325 IEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYAN 361
+ + +VI + N +LQ + + +++ F ++Y++
Sbjct: 422 LTRQAHVI-GDGMPNEYLQKMETVRDLEAFAAVVYSS 457
>ref|XP_001604955.1| PREDICTED: similar to perixosomal biogenesis factor [Nasonia
vitripennis]
Length = 360
Score = 300 bits (769), Expect = 1e-79, Method: Composition-based stats.
Identities = 82/380 (21%), Positives = 165/380 (43%), Gaps = 47/380 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
+R F+ HRRK L + G+ +L + S R + E N+ + +++ + H
Sbjct: 5 IRNFFYNHRRKFLFSGVFFGTLIILARYARSKLREWQEKE-------VNELLERSRRRQH 57
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILS 123
FES + D T L + L ++ +D +++ L G +K+ W+ LKIL+
Sbjct: 58 FESTERTCDQTVLMLSKN-LRTATTKCLDCMKIVNDLRNGST-----DKISAWNRLKILA 111
Query: 124 FTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSS 183
+R ++S TML + +R+Q+N+LG + D+ S E+ +D ++K+LS
Sbjct: 112 ISRTATIIYSYTMLVITLRIQLNVLGGSMLKDSKIGDSSPQSSEK---VDDRMKEKYLSL 168
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF--MSTGSPHHW 241
+ L+ + + L +Q EE+ L D + R +Q I + P
Sbjct: 169 CENLMEHGVEKLSLLIQEKVEEITASYSLGDKLHLRDVQHIYWAITSTVSAVEKSEPVKN 228
Query: 242 VDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVE 301
+ ++ D ++ SD+ ++K L+ +T ++L S E ++++ +L+ +L++
Sbjct: 229 ISSYLIADDF----IKNNQSDKPLAK---LLDQTLDLLESQEVQDLMQTNLRSGFALLID 281
Query: 302 EM-----ETQTEAGGLATG----------KPLAKVLPQIEKTMNVITAEPS----KNRFL 342
+ E G + G P+AK++P + + P+ + +L
Sbjct: 282 RISEYFNENAKSDGETSNGDNFVNLNAVTMPMAKIIPILNGQVP---ENPTPGDLPSDWL 338
Query: 343 QIIRDLPEVKLFFTLLYANM 362
Q + E+K +Y
Sbjct: 339 QRLLLSEELKALGANIYEAF 358
>ref|NP_001040264.1| peroxisomal biogenesis factor 3 [Bombyx mori]
gb|ABD36331.1| peroxisomal biogenesis factor 3 [Bombyx mori]
Length = 370
Score = 295 bits (757), Expect = 3e-78, Method: Composition-based stats.
Identities = 83/359 (23%), Positives = 164/359 (45%), Gaps = 44/359 (12%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIK-TQMKA 62
++ F +HRRK LVT +G Y+L R E+E + + T+ K
Sbjct: 5 IKNFLNRHRRKFLVTGAVVGGLYVLTSYAQKKLRD--------GQEKEAKKFFEMTRKKQ 56
Query: 63 HFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKIL 122
HFE + + T L + + +S I ++ ++ +L + +P +K LW++LKI
Sbjct: 57 HFEGTERTCNQTILSLS-KMVSESIWSWLNTEEIVQKLQE-----NPEDKWALWEQLKIT 110
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
FTR+ + ++ + ML + +RVQ+N++G +LY D+ E ++D + + K+LS
Sbjct: 111 IFTRIGVLVYGLCMLQVALRVQLNVMGGYLYKDSV--------QEGDPMVDSNLQTKYLS 162
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST---GSPH 239
+ V + LI ++ + V++ LK IT + +++ I ++ + G P
Sbjct: 163 LCHYFVGQGIEDLIKRIEKIVKRVVEPVWLKKKITLQEVEQMFWSIQTIWCTDTVEGDPL 222
Query: 240 HWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVL 299
+ Y ++ + +DS + + K ET ++L S E ++ S+ +
Sbjct: 223 KNMVYYLIGHN-----EINDSKWDTIVK------ETMDILESDEVISVTMSSVSRSFSCV 271
Query: 300 VEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLL 358
++ E L K + Q+E +VIT+ K + + D+ +V+++F L
Sbjct: 272 ID------EVANLLVTKSIPPSKNQLEVEDHVITSGVLKLKSEPFV-DVNKVEIYFVKL 323
>ref|XP_001242086.1| hypothetical protein CIMG_05982 [Coccidioides immitis RS]
gb|EAS30503.1| hypothetical protein CIMG_05982 [Coccidioides immitis RS]
Length = 556
Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats.
Identities = 83/451 (18%), Positives = 171/451 (37%), Gaps = 94/451 (20%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADL--ERELAHERENDEIIKTQMK 61
R + R+HR+ + + AG +G GYL + S ++ +A E + Q
Sbjct: 35 TRRWLRQHRKGLAIGAGVVGIGYLATQYVFSKISEASERMSSERIARENLRRRFEQNQSD 94
Query: 62 AHFESIQMIVDST---------------------------------------TLPHAMQ- 81
F + ++ +T P +
Sbjct: 95 CTFTVLALLPTATENILAALPVEELTNELQQKRAARLAKLTASEMQGSEMSSGPPSMTED 154
Query: 82 -FLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLY 140
S+R + S V+D G+ + QLW++LKI S TR L+++++L+L
Sbjct: 155 DVSSLRSDNYVHASQVVDS-TTGEQAQRAKSRTQLWNDLKINSLTRSFTLLYTLSLLTLL 213
Query: 141 IRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDD------------EQKFLSSADFLV 188
R+Q+N+LGR Y+ + AL S ++ DD +++L+ + +L+
Sbjct: 214 TRIQLNLLGRRNYLSSVVALASPPQNPSTISLEDDDNPEHSFGNDFETNRRYLTFSWWLL 273
Query: 189 TNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPH----HWVDY 244
L+++++ + ++V ++ IT L E + + S W+ Y
Sbjct: 274 HRGWKDLMAEVEAAVKDVFGEVNPREDITHEKLSELTLAVRKRVEGATSGERRVRKWLPY 333
Query: 245 LMMPQDTKLSRTTSDS-------SDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTD 297
L+ P++ + S ++ + L+ ET +++ S FT++ +
Sbjct: 334 LLPPREQEDFVLQESGVLSATEASPQSAATLRHLLDETSDLIDSPSFTHVFSLLNNEAFS 393
Query: 298 VLVEEMETQ-------------------TEAGGLATGKP------LAKVLPQIEKTMNVI 332
L++ + A + +P LA +L I + +VI
Sbjct: 394 HLIDTKCATEAFKGLSQAQKKDQSPPFSSTATMVPVAEPSAPKTKLASILAVISRQSHVI 453
Query: 333 -TAEPSKNRFLQII-RDLPEVKLFFTLLYAN 361
N +L I+ R++ E++ F ++Y++
Sbjct: 454 GNGTNPPNEYLSIMEREVRELEAFAAVIYSS 484
>ref|XP_001398373.1| hypothetical protein An17g01440 [Aspergillus niger]
emb|CAK43040.1| unnamed protein product [Aspergillus niger]
Length = 533
Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats.
Identities = 83/464 (17%), Positives = 174/464 (37%), Gaps = 114/464 (24%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHER-ENDEIIKTQMKA 62
+ ++R++R+ + + AG +G+GYL + S A ER +D I + ++
Sbjct: 5 TKRWFRRNRKGLAIGAGVIGAGYLAGQYLLSKISE--------ARERMSSDRIARENLRR 56
Query: 63 HFESIQMIVDSTTLPHAMQF--------LSIRISEEID---------------------- 92
FE Q T L +++E+
Sbjct: 57 RFEQNQTDCTYTVLALLPTAAEDILEALPVEELTKELQKKRAERLARLNAGEGTGSDLSS 116
Query: 93 -----------------------VSHVMDRLNQGKGMLSPP-EKLQLWDELKILSFTRMV 128
S + + +G G P K QLW+E+KI S TR
Sbjct: 117 VGPSITDDDRRSLSSFQSDGFVRTSQLGESTIEGSGSPRPKRNKTQLWNEVKITSITRSF 176
Query: 129 LSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHL-LEEVDLIDRDDE---------- 177
++++T+L+++ R+Q+N+LGR Y+ + ++ + + L D DD+
Sbjct: 177 TLIYTLTLLTIFTRIQLNLLGRRNYLSSVISMATPPADGSTIRLEDHDDDDLTQTLGNDF 236
Query: 178 ---QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF-- 232
+++L+ + +L+ L+ ++Q + EV ++ I+ L E ++Q+
Sbjct: 237 ETNRRYLAFSWWLLHRGWKQLMEEVQAAVTEVFGPLNPREDISVSKLSELILQVRGKIEG 296
Query: 233 --MSTGSPHHWVDYLMMPQ--------DTKLSRTTSDSSDEAVSKFHQLMVETREVLIST 282
W+ Y++ + ++ + T ++ + + L+ ET +++ S
Sbjct: 297 VTEEDRKYRKWLSYVLPSREEEDHLLQESGVLGVTEPATPQTTASLRHLLDETADLIDSP 356
Query: 283 EFTNIVEISLKCFTDVLVEEMETQ-----------------------TEAGGLATGKPLA 319
FT ++ + L+E+ + A G T LA
Sbjct: 357 TFTRVMLLLNNECFQTLIEQCKADAFKSSTQVPTSVPQSFTSVATVVPAADGSDTKTKLA 416
Query: 320 KVLPQIEKTMNVI-TAEPSKNRFLQIIRD-LPEVKLFFTLLYAN 361
VL + + +VI N +L I + E++ F ++Y++
Sbjct: 417 NVLAVLARQAHVIGNGTAPPNLYLTSIEQGVRELEAFAAVIYSS 460
>ref|XP_001266008.1| peroxisomal membrane protein (Pex3), putative [Neosartorya fischeri
NRRL 181]
gb|EAW24111.1| peroxisomal membrane protein (Pex3), putative [Neosartorya fischeri
NRRL 181]
Length = 529
Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats.
Identities = 83/463 (17%), Positives = 180/463 (38%), Gaps = 113/463 (24%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHER-ENDEIIKTQMKA 62
R ++R++R+ + + AG +G+GYL + S A ER +D I + ++
Sbjct: 5 TRRWFRRNRKGLAIGAGIIGAGYLAGQYVLSKITE--------ARERMSSDRIARENLRR 56
Query: 63 HFESIQMIVDSTTLPHAMQF--------LSIRISEEID--VSHVMDRLNQGKG------M 106
FE Q T L +++E+ + + RL G+G
Sbjct: 57 RFEQNQTDCTYTVLALLPTAAEGILEALPVEELTKELQKKRAERLARLQAGEGTVSDLSS 116
Query: 107 LSPP--------------------------------------EKLQLWDELKILSFTRMV 128
+SP K QLW+E+KI S TR
Sbjct: 117 VSPSAADDDRRSLSSFQSDGFVRTSQLGEPSFDGEGPARVKRNKTQLWNEVKITSVTRSF 176
Query: 129 LSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHL-LEEVDLIDRDDE---------- 177
++++++L+++ R+Q+N+LGR Y+ + +L + + L D DD+
Sbjct: 177 TLIYTLSLLTIFTRIQLNLLGRRNYLSSVISLATPPADASTIKLEDHDDDLTQTLGNDFE 236
Query: 178 --QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFM-- 233
+++L+ + +L+ L++++Q + + ++ I+ L E + I
Sbjct: 237 TNRRYLAFSWWLLHRGWKDLMNEVQAAVADAFGSLNPREDISVGRLSELTLDIRKKVEGN 296
Query: 234 --STGSPHHWVDYLMMPQ--------DTKLSRTTSDSSDEAVSKFHQLMVETREVLISTE 283
W+ YL+ P+ ++ ++ T S+ ++ S L+ ET +++ S
Sbjct: 297 TPEERRSRRWLPYLLPPREEEEHLLEESGVAGVTEPSTSQSASTLRHLLDETADLIESPT 356
Query: 284 FTNIVEISLKCFTDVLVEEME-------TQTEAGGLATGKPLAKVLPQIE---------- 326
F +++ D+L++ Q + +A V+PQ++
Sbjct: 357 FGRVLQGLNDECFDLLMQNCIKEAFQSSPQASESVPQSFTSVATVVPQVKTADLKTKLAN 416
Query: 327 ------KTMNVI-TAEPSKNRFLQII-RDLPEVKLFFTLLYAN 361
+ +VI N +L + +++ ++ F ++Y++
Sbjct: 417 VLAVMARQAHVIGNGTNPPNIYLTAMDQNVRNLEAFAAVIYSS 459
>gb|EDP51377.1| peroxisomal membrane protein (Pex3), putative [Aspergillus
fumigatus A1163]
Length = 528
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 82/463 (17%), Positives = 180/463 (38%), Gaps = 112/463 (24%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
R ++R++R+ + + AG +G+GYL + S E + +D I + ++
Sbjct: 5 TRRWFRRNRKGLAIGAGIIGAGYLAGQYVLSKI-------TEAREQMSSDRIARENLRRR 57
Query: 64 FESIQMIVDSTTL---PHAMQFLSIRISEEIDVSHV-------MDRLNQGKG------ML 107
FE Q T L P A + + + E + + RL G+G +
Sbjct: 58 FEQNQTDCTYTVLALLPTAAEGIVEALPVEELTKELQKKRAERLARLQAGEGTVSDLSSV 117
Query: 108 SPP--------------------------------------EKLQLWDELKILSFTRMVL 129
SP K QLW+E+KI S TR
Sbjct: 118 SPSAADDDRRSLSSFQSDGFVRTSQVGESSFDGEGPARVKRNKTQLWNEVKITSVTRSFT 177
Query: 130 SLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLL-EEVDLIDRDDE----------- 177
++++++L+++ R+Q+N+LGR Y+ + +L + + L D DD+
Sbjct: 178 LIYTLSLLTIFTRIQLNLLGRRNYLSSVISLATPPANTSTIKLEDHDDDDLTQTLGNDFE 237
Query: 178 --QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFM-- 233
+++L+ + +L+ L++++Q + + ++ I+ L E + I
Sbjct: 238 TNRRYLAFSWWLLHRGWKDLMNEVQAAVTDAFGSLNPREDISVGRLSELTLDIRKKVEGN 297
Query: 234 --STGSPHHWVDYLMMPQ--------DTKLSRTTSDSSDEAVSKFHQLMVETREVLISTE 283
W+ YL+ P+ ++ ++ T ++ ++ S L+ ET +++ S
Sbjct: 298 TPEERRSRRWLPYLLPPREEEEHLLEESGVAGVTEPTTSQSASTLRHLLDETADLIESPT 357
Query: 284 FTNIVEISLKCFTDVLVEEMET-------QTEAGGLATGKPLAKVLPQIE---------- 326
F +++ D+L++ Q + +A V+PQ++
Sbjct: 358 FGRVLQGLNDECFDLLMQNCIQEAFQSSPQASESVPQSFTSVATVVPQVKTADVKTKLAN 417
Query: 327 ------KTMNVI-TAEPSKNRFLQII-RDLPEVKLFFTLLYAN 361
+ +VI N +L + +++ ++ F ++Y++
Sbjct: 418 VLAVMARQAHVIGNGTNPPNIYLSAMDQNVRNLEAFAAVIYSS 460
Searching..................................................done
Results from round 3
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
ref|NP_683410.1| PEX3/PEX3-2 (PEROXIN 3-2) [Arabidopsis tha... 421 e-116
ref|XP_541132.2| PREDICTED: similar to Peroxisomal biogenes... 411 e-113
ref|XP_518776.1| PREDICTED: peroxisomal biogenesis factor 3... 408 e-112
gb|AAX37078.1| peroxisomal biogenesis factor 3 [synthetic c... 407 e-112
ref|NP_003621.1| peroxisomal biogenesis factor 3 [Homo sapi... 407 e-112
ref|XP_001091411.1| PREDICTED: peroxisomal biogenesis facto... 407 e-112
ref|NP_001092457.1| peroxisomal biogenesis factor 3 [Bos ta... 406 e-111
ref|NP_112640.1| peroxisomal biogenesis factor 3 [Rattus no... 401 e-110
sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 (Perox... 401 e-110
gb|AAG60126.1|AC073555_10 lysine and histidine specific tra... 397 e-109
ref|XP_419708.1| PREDICTED: similar to peroxisomal biogenes... 396 e-108
ref|NP_064345.1| peroxisomal biogenesis factor 3 [Mus muscu... 395 e-108
gb|EDL03500.1| peroxisomal biogenesis factor 3, isoform CRA... 395 e-108
dbj|BAC35986.1| unnamed protein product [Mus musculus] 394 e-108
ref|XP_001370565.1| PREDICTED: similar to peroxisomal bioge... 393 e-107
gb|AAM63222.1| unknown [Arabidopsis thaliana] 385 e-105
ref|NP_566598.1| PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana] 385 e-105
ref|NP_956522.1| peroxisomal biogenesis factor 3 [Danio rer... 385 e-105
ref|XP_001331521.1| PREDICTED: hypothetical protein [Danio ... 384 e-105
ref|NP_001039031.1| peroxisomal biogenesis factor 3 [Xenopu... 377 e-103
ref|XP_001817054.1| hypothetical protein [Aspergillus oryza... 373 e-101
ref|XP_659885.1| hypothetical protein AN2281.2 [Aspergillus... 373 e-101
ref|XP_001218024.1| conserved hypothetical protein [Aspergi... 373 e-101
gb|EDL03499.1| peroxisomal biogenesis factor 3, isoform CRA... 372 e-101
ref|NP_001085641.1| MGC82731 protein [Xenopus laevis] >gi|4... 372 e-101
emb|CAO68158.1| unnamed protein product [Vitis vinifera] 371 e-101
gb|AAG50845.1|AC074308_1 hypothetical protein, 3' partial [... 368 e-100
gb|ABH11414.1| peroxin 3 [Penicillium chrysogenum] 365 2e-99
ref|XP_001507262.1| PREDICTED: similar to peroxisomal bioge... 365 3e-99
ref|XP_001176855.1| PREDICTED: similar to peroxisomal bioge... 361 6e-98
ref|XP_780894.2| PREDICTED: similar to peroxisomal biogenes... 360 7e-98
ref|XP_001497293.1| PREDICTED: similar to peroxisomal bioge... 359 3e-97
ref|XP_387118.1| hypothetical protein FG06942.1 [Gibberella... 354 7e-96
ref|XP_001398373.1| hypothetical protein An17g01440 [Asperg... 345 5e-93
ref|NP_001062839.1| Os09g0314300 [Oryza sativa (japonica cu... 340 7e-92
ref|XP_001242086.1| hypothetical protein CIMG_05982 [Coccid... 340 1e-91
ref|XP_001555052.1| hypothetical protein BC1G_06575 [Botryo... 337 1e-90
ref|XP_001273964.1| peroxisomal membrane protein (Pex3), pu... 336 1e-90
ref|XP_001266008.1| peroxisomal membrane protein (Pex3), pu... 335 3e-90
ref|XP_369909.2| hypothetical protein MGG_06424 [Magnaporth... 335 4e-90
gb|EDP51377.1| peroxisomal membrane protein (Pex3), putativ... 333 1e-89
ref|XP_754003.1| peroxisomal membrane protein (Pex3) [Asper... 332 2e-89
ref|XP_001805510.1| hypothetical protein SNOG_15360 [Phaeos... 331 6e-89
ref|XP_001635320.1| predicted protein [Nematostella vectens... 330 1e-88
gb|EAZ08561.1| hypothetical protein OsI_029793 [Oryza sativ... 327 8e-88
ref|XP_962987.1| hypothetical protein NCU06175 [Neurospora ... 327 1e-87
ref|XP_001172297.1| PREDICTED: similar to Pex3 protein isof... 327 1e-87
ref|XP_001753372.1| predicted protein [Physcomitrella paten... 326 2e-87
gb|EEH36161.1| peroxin 3 [Paracoccidioides brasiliensis Pb01] 322 2e-86
ref|XP_001769437.1| predicted protein [Physcomitrella paten... 322 4e-86
ref|XP_001598504.1| hypothetical protein SS1G_00593 [Sclero... 317 6e-85
gb|EDU40742.1| peroxisomal membrane protein (Pex3) [Pyrenop... 317 9e-85
ref|NP_974332.1| PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana] 316 2e-84
ref|XP_001755103.1| predicted protein [Physcomitrella paten... 312 4e-83
ref|XP_505754.1| YlPEX3 [Yarrowia lipolytica] >gi|54036237|... 305 3e-81
ref|XP_001229801.1| hypothetical protein CHGG_03285 [Chaeto... 298 4e-79
ref|XP_001863328.1| peroxisomal biogenesis factor 3 [Culex ... 289 3e-76
gb|EEH46051.1| peroxin 3 [Paracoccidioides brasiliensis Pb18] 288 3e-76
ref|XP_001604955.1| PREDICTED: similar to perixosomal bioge... 281 4e-74
ref|NP_001040264.1| peroxisomal biogenesis factor 3 [Bombyx... 277 9e-73
sp|Q92262|PEX3_PICPA Peroxisomal biogenesis factor 3 (Perox... 277 1e-72
ref|XP_970039.1| PREDICTED: similar to CG6859-PA [Tribolium... 275 5e-72
ref|XP_001661904.1| perixosomal biogenesis factor [Aedes ae... 271 8e-71
ref|XP_625168.1| PREDICTED: similar to CG6859-PA [Apis mell... 270 1e-70
sp|Q01497|PEX3_PICAN Peroxisomal biogenesis factor 3 (Perox... 266 1e-69
emb|CAF91476.1| unnamed protein product [Tetraodon nigrovir... 260 1e-67
ref|XP_713871.1| hypothetical protein CaO19.4426 [Candida a... 255 3e-66
ref|XP_714071.1| peroxisomal integral membrane protein Pex3... 255 3e-66
ref|XP_312432.3| AGAP002507-PA [Anopheles gambiae str. PEST... 255 5e-66
dbj|BAE87522.1| unnamed protein product [Macaca fascicularis] 255 5e-66
ref|XP_001485386.1| hypothetical protein PGUG_03115 [Pichia... 254 1e-65
ref|XP_501103.1| hypothetical protein [Yarrowia lipolytica]... 253 1e-65
ref|NP_648753.1| CG6859 CG6859-PA [Drosophila melanogaster]... 251 8e-65
ref|XP_001385728.2| Peroxisomal biogenesis factor 3 (Peroxi... 250 1e-64
ref|XP_001353169.1| GA19910-PA [Drosophila pseudoobscura] >... 248 5e-64
ref|NP_010616.1| Peroxisomal membrane protein (PMP) require... 246 3e-63
ref|XP_461471.1| hypothetical protein DEHA0F27577g [Debaryo... 239 3e-61
ref|XP_449403.1| hypothetical protein CAGL0M01342g [Candida... 231 7e-59
ref|XP_762347.1| hypothetical protein UM06200.1 [Ustilago m... 228 8e-58
ref|NP_984393.1| ADR296Cp [Ashbya gossypii ATCC 10895] >gi|... 227 8e-58
gb|AAB52665.2| Peroxisome assembly factor protein 3, isofor... 227 1e-57
ref|XP_001730507.1| hypothetical protein MGL_2303 [Malassez... 223 2e-56
ref|XP_001528327.1| conserved hypothetical protein [Loddero... 222 4e-56
dbj|BAE91223.1| unnamed protein product [Macaca fascicularis] 220 1e-55
ref|XP_001646509.1| hypothetical protein Kpol_1055p7 [Vande... 217 9e-55
ref|XP_001676849.1| Hypothetical protein CBG14834 [Caenorha... 216 2e-54
ref|XP_454714.1| unnamed protein product [Kluyveromyces lac... 215 5e-54
ref|XP_001892993.1| Peroxin-3 family protein [Brugia malayi... 212 3e-53
ref|XP_640890.1| transmembrane protein [Dictyostelium disco... 188 8e-46
gb|AAI58162.1| Unknown (protein for MGC:135489) [Xenopus tr... 186 3e-45
dbj|BAB02028.1| unnamed protein product [Arabidopsis thaliana] 184 7e-45
emb|CAD92492.1| peroxisomal biogenesis factor 3 [Homo sapiens] 181 1e-43
ref|XP_001908169.1| unnamed protein product [Podospora anse... 179 3e-43
ref|XP_001878936.1| predicted protein [Laccaria bicolor S23... 175 6e-42
ref|NP_594868.2| peroxin-3 (predicted) [Schizosaccharomyces... 166 3e-39
ref|XP_001536607.1| conserved hypothetical protein [Ajellom... 160 1e-37
ref|XP_001884959.1| predicted protein [Laccaria bicolor S23... 158 6e-37
pir||T38475 hypothetical protein SPAC29A4.14c - fission yea... 155 5e-36
ref|XP_001200198.1| PREDICTED: similar to Pex3 protein, par... 139 3e-31
emb|CAO68151.1| unnamed protein product [Vitis vinifera] 134 8e-30
ref|XP_776678.1| hypothetical protein CNBC1690 [Cryptococcu... 134 9e-30
ref|XP_569751.1| Pex3p [Cryptococcus neoformans var. neofor... 132 4e-29
ref|XP_001536606.1| conserved hypothetical protein [Ajellom... 114 9e-24
ref|NP_509025.1| PeRoXisome assembly factor family member (... 89 6e-16
ref|XP_001840540.1| predicted protein [Coprinopsis cinerea ... 86 4e-15
ref|XP_001359715.1| GA18583-PA [Drosophila pseudoobscura] >... 67 2e-09
Sequences not found previously or not previously below threshold:
ref|NP_509024.1| C15H9.10 [Caenorhabditis elegans] >gi|1293... 124 9e-27
ref|XP_001421344.1| predicted protein [Ostreococcus lucimar... 50 2e-04
gb|AAY84896.1| LP04448p [Drosophila melanogaster] 48 0.001
emb|CAB55772.1| microtubule associated protein [Drosophila ... 48 0.001
ref|NP_732105.1| mini spindles CG5000-PA [Drosophila melano... 48 0.001
gb|AAL13641.1| GH18634p [Drosophila melanogaster] 47 0.002
emb|CAL57679.1| unnamed protein product [Ostreococcus tauri] 46 0.005
ref|XP_001630590.1| predicted protein [Nematostella vectens... 43 0.030
ref|XP_001849454.1| microtubule associated protein xmap215 ... 43 0.036
ref|ZP_02736189.1| probable serine/threonine protein kinase... 40 0.25
ref|YP_001010320.1| DNA gyrase/topoisomerase IV, subunit A ... 40 0.29
ref|NP_193243.1| DC1 domain-containing protein [Arabidopsis... 40 0.31
ref|ZP_01131670.1| predicted calcium-binding protein [Pseud... 39 0.65
ref|ZP_02912106.1| DnaQ family exonuclease/DinG family heli... 38 1.0
ref|ZP_01120334.1| putative two-component system sensor his... 37 1.8
ref|XP_001433938.1| hypothetical protein GSPATT00035670001 ... 37 1.8
ref|XP_001457454.1| hypothetical protein GSPATT00023230001 ... 37 2.6
ref|NP_179782.1| CYP96A5 (cytochrome P450, family 96, subfa... 37 2.8
ref|XP_001484163.1| hypothetical protein PGUG_03544 [Pichia... 37 3.0
ref|YP_011883.1| HDIG/HD/KH domain protein [Desulfovibrio v... 37 3.0
ref|XP_001651363.1| microtubule associated protein xmap215 ... 37 3.1
ref|YP_001514597.1| two-component hybrid histidine kinase s... 37 3.2
ref|XP_309487.4| AGAP011162-PA [Anopheles gambiae str. PEST... 37 3.3
gb|AAH59307.1| Bat2-a protein [Xenopus laevis] 37 3.5
ref|NP_726627.1| plexin A CG11081-PB, isoform B [Drosophila... 36 3.7
gb|AAD09425.1| plexin A [Drosophila melanogaster] 36 3.7
ref|XP_001598736.1| hypothetical protein SS1G_00825 [Sclero... 36 3.7
ref|ZP_01906123.1| DEAD/DEAH box helicase-like protein [Ple... 36 3.8
ref|NP_524637.2| plexin A CG11081-PA, isoform A [Drosophila... 36 3.9
ref|XP_001228202.1| hypothetical protein CHGG_10275 [Chaeto... 36 4.7
ref|NP_840437.1| rnr; exoribonuclease RNAse R (vacB protein... 36 5.3
ref|NP_001080008.1| hypothetical protein LOC379698 [Xenopus... 36 6.0
gb|EEH40570.1| conserved hypothetical protein [Paracoccidio... 35 6.1
ref|YP_732093.1| polyphosphate kinase [Synechococcus sp. CC... 35 6.5
ref|ZP_02975223.1| integral membrane sensor signal transduc... 35 7.9
ref|XP_001549161.1| hypothetical protein BC1G_12331 [Botryo... 35 8.0
ref|ZP_02068921.1| hypothetical protein BACUNI_00322 [Bacte... 35 9.0
ref|NP_840204.1| putative similar to unknown proteins [Nitr... 35 9.2
ref|ZP_02176613.1| hypothetical protein HG1285_01983 [Hydro... 35 9.7
ref|XP_001424526.1| hypothetical protein GSPATT00028163001 ... 35 9.9
>ref|NP_683410.1| PEX3/PEX3-2 (PEROXIN 3-2) [Arabidopsis thaliana]
gb|AAL75911.1| At1g48640/F11I4_17 [Arabidopsis thaliana]
gb|AAM70527.1| At1g48640/F11I4_17 [Arabidopsis thaliana]
dbj|BAD43104.1| unknown protein [Arabidopsis thaliana]
Length = 364
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 364/364 (100%), Positives = 364/364 (100%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM
Sbjct: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK
Sbjct: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH
Sbjct: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV
Sbjct: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA
Sbjct: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
Query: 361 NMPQ 364
NMPQ
Sbjct: 361 NMPQ 364
>ref|XP_541132.2| PREDICTED: similar to Peroxisomal biogenesis factor 3 (Peroxin-3)
(Peroxisomal assembly protein PEX3) [Canis familiaris]
Length = 487
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 86/384 (22%), Positives = 175/384 (45%), Gaps = 40/384 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ F ++H++K + LG Y+L K R + + E + I + +
Sbjct: 116 LRSTWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARR 168
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL++W++LK
Sbjct: 169 QYHFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKN-----RPSNKLEIWEDLK 222
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 223 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTVLAPPDVQQQY 278
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST----- 235
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++
Sbjct: 279 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW 338
Query: 236 ----GSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
S Y+M ++T L+ S V+ +L+ ETR++L S +F+ ++
Sbjct: 339 INKDESKSLLCHYMMPDEETPLAVQACGLSPRDVTTI-KLLNETRDMLESPDFSTVLNTC 397
Query: 292 LKCFTDVLVEEMETQTEAGGLA------------TGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M PLAK++P + ++ + +E + +
Sbjct: 398 LNRGFSRLLDNMAEFFRPTEQDLQHSNSMSSLSSVSLPLAKIIPIVNGQIHSVCSE-TPS 456
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 457 HFVQDLLMMEQVKDFAANVYEAFS 480
>ref|XP_518776.1| PREDICTED: peroxisomal biogenesis factor 3 isoform 2 [Pan
troglodytes]
Length = 373
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 89/384 (23%), Positives = 181/384 (47%), Gaps = 40/384 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ V F ++H++K + LG Y+L K R + + E + I + +
Sbjct: 2 LRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL++W++LK
Sbjct: 55 QYHFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKN-----RPSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST----- 235
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW 224
Query: 236 ----GSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
GS Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 225 INKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLTMEQVKDFAANVYEAFS 366
>gb|AAX37078.1| peroxisomal biogenesis factor 3 [synthetic construct]
Length = 374
Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 90/384 (23%), Positives = 180/384 (46%), Gaps = 40/384 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ V F ++H++K + LG Y+L K R + + E + I + +
Sbjct: 2 LRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL++W++LK
Sbjct: 55 QYHFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKN-----RPSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR ++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST----- 235
LSS L+ + + LI+ ++ + ++VL LK ++ L++ + +I ++
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW 224
Query: 236 ----GSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
GS Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 225 INKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLTMEQVKDFAANVYEAFS 366
>ref|NP_003621.1| peroxisomal biogenesis factor 3 [Homo sapiens]
sp|P56589|PEX3_HUMAN Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
emb|CAA04879.1| Pex3 protein [Homo sapiens]
emb|CAA10362.1| PEX3 protein [Homo sapiens]
emb|CAA08904.1| Pex3p [Homo sapiens]
emb|CAB53744.1| peroxisomal biogenesis factor 3 [Homo sapiens]
dbj|BAA97993.1| Pex3p [Homo sapiens]
gb|AAH14551.1| Peroxisomal biogenesis factor 3 [Homo sapiens]
gb|AAH15506.1| Peroxisomal biogenesis factor 3 [Homo sapiens]
gb|AAQ18039.1| transformation-related protein 18 [Homo sapiens]
emb|CAG46859.1| PEX3 [Homo sapiens]
gb|EAW47866.1| peroxisomal biogenesis factor 3 [Homo sapiens]
Length = 373
Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 90/384 (23%), Positives = 180/384 (46%), Gaps = 40/384 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ V F ++H++K + LG Y+L K R + + E + I + +
Sbjct: 2 LRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL++W++LK
Sbjct: 55 QYHFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKN-----RPSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR ++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST----- 235
LSS L+ + + LI+ ++ + ++VL LK ++ L++ + +I ++
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW 224
Query: 236 ----GSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
GS Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 225 INKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLTMEQVKDFAANVYEAFS 366
>ref|XP_001091411.1| PREDICTED: peroxisomal biogenesis factor 3 [Macaca mulatta]
sp|Q60HE1|PEX3_MACFA Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
dbj|BAD51974.1| peroxisomal biogenesis factor 3 [Macaca fascicularis]
Length = 373
Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats.
Identities = 89/384 (23%), Positives = 181/384 (47%), Gaps = 40/384 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ V F ++H++K + LG Y+L K R + + E + I + +
Sbjct: 2 LRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL++W++LK
Sbjct: 55 QYHFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKN-----RPSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST----- 235
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++
Sbjct: 165 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW 224
Query: 236 ----GSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
GS Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 225 INKDGSKSLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLTMEQVKDFAANVYEAFS 366
>ref|NP_001092457.1| peroxisomal biogenesis factor 3 [Bos taurus]
gb|AAI46193.1| MGC166343 protein [Bos taurus]
Length = 373
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 91/382 (23%), Positives = 179/382 (46%), Gaps = 40/382 (10%)
Query: 3 FVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKA 62
F ++H++K + LG Y+L K R + + E + I + + +
Sbjct: 4 STWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARRQY 56
Query: 63 HFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKIL 122
HFES Q + T L + L + ++++ + L P KL++W++LKI+
Sbjct: 57 HFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKT-----RPSNKLEIWEDLKII 110
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++LS
Sbjct: 111 SFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTVLAPPDVQQQYLS 166
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST------- 235
S L+ + + LI+ ++ + +++L LK ++ L++ + +I D+
Sbjct: 167 SIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRDLVEQHKSSSWIN 226
Query: 236 --GSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLK 293
GS Y+M ++T L+ S V+ +L+ ETR++L S +F+ ++ L
Sbjct: 227 NDGSKSLLCHYMMPDEETPLAVQACGLSPRDVTTI-KLLNETRDMLESPDFSTVLNTCLS 285
Query: 294 CFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRF 341
L++ M E + G + PLAK++P I ++ + +E + + F
Sbjct: 286 RGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIINGQIHSVCSE-TPSHF 344
Query: 342 LQIIRDLPEVKLFFTLLYANMP 363
+Q + + +VK F +Y
Sbjct: 345 VQDLLMMEQVKDFAANVYEAFS 366
>ref|NP_112640.1| peroxisomal biogenesis factor 3 [Rattus norvegicus]
sp|Q9JJK4|PEX3_RAT Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
dbj|BAA97992.1| Pex3p [Rattus norvegicus]
gb|AAH62046.1| Peroxisomal biogenesis factor 3 [Rattus norvegicus]
gb|EDL93733.1| peroxisomal biogenesis factor 3 [Rattus norvegicus]
Length = 372
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 86/383 (22%), Positives = 178/383 (46%), Gaps = 39/383 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ + F ++H++K + LG Y+L K R + + E + I + +
Sbjct: 2 LRSMWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKLREIQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL++W++LK
Sbjct: 55 QYHFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKN-----RPSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TSILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTG---- 236
LSS L+ + + L++ ++ + + +L LK ++ L++ + +I +
Sbjct: 165 LSSIQHLLGDGLTELVTVIKQAVQRILGSISLKHSLSLLDLEQKLKEIRTLVEQHRSCWN 224
Query: 237 ----SPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
S Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 225 DKDASKSSLCHYMMPDEETPLAAQAYGLSPRDITTI-KLLNETRDMLESPDFSTVLNTCL 283
Query: 293 KCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNR 340
L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 NRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSH 342
Query: 341 FLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 FVQDLLMMEQVKDFAANVYEAFS 365
>sp|Q9JJK3|PEX3_CRILO Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
dbj|BAA97994.1| Pex3p [Cricetulus longicaudatus]
Length = 373
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 86/384 (22%), Positives = 179/384 (46%), Gaps = 40/384 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ + F ++H++K + LG Y+L K R + + E + I + +
Sbjct: 2 LRSMWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL++W++LK
Sbjct: 55 QYHFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKN-----RPSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TTVLAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP-- 238
LSS L+ + + L++ ++ + + +L LK ++ L++ + +I + SP
Sbjct: 165 LSSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHRSPSW 224
Query: 239 -------HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 225 IDKDVSKSSLCQYMMPDEETPLAAQAYGLSPRDITTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M E + G + PLAK++P + ++ + ++ + +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSD-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLMMEQVKDFAANVYEAFS 366
>gb|AAG60126.1|AC073555_10 lysine and histidine specific transporter, putative [Arabidopsis
thaliana]
Length = 809
Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 340/374 (90%), Positives = 341/374 (91%), Gaps = 30/374 (8%)
Query: 11 HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ----------- 59
HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ
Sbjct: 8 HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQLSSVLIKTDPL 67
Query: 60 -------------------MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL 100
MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL
Sbjct: 68 DFSSYGFSNGPVLFVLLFRMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL 127
Query: 101 NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL 160
NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL
Sbjct: 128 NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL 187
Query: 161 GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV 220
GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV
Sbjct: 188 GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV 247
Query: 221 LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI 280
LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI
Sbjct: 248 LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI 307
Query: 281 STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR 340
STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR
Sbjct: 308 STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR 367
Query: 341 FLQIIRDLPEVKLF 354
FLQIIRDLPE+
Sbjct: 368 FLQIIRDLPEIDEL 381
>ref|XP_419708.1| PREDICTED: similar to peroxisomal biogenesis factor 3 [Gallus
gallus]
Length = 369
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 92/380 (24%), Positives = 176/380 (46%), Gaps = 36/380 (9%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ + F ++H++K LV LG YLL K R + + E + I + +
Sbjct: 2 LRSLWSFLKRHKKKCLVLGTFLGGVYLLGKYGQKKIREIQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + +++ + L P KL++W++LK
Sbjct: 55 QYHFESNQRTCNMTVL-SMLPTLRDALMHQLNSESLTSLLKN-----RPANKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L + +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVCKNG----TTPLAPPEVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP-- 238
LSS L+ + + LI+ ++ + +V LK ++ L++ + +I DV S
Sbjct: 165 LSSIQHLLGDGLTELITIVKQAVHKVFGSISLKHALSLLELEQKLKEIRDVVEHRDSDQV 224
Query: 239 ---HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCF 295
YLM ++ L+ ++ + +L+ ETR++L S +F+ ++ L
Sbjct: 225 APYSPLCHYLMPDEENPLATQACGLTERDTATI-KLLNETRDMLESPDFSTVLSTCLNRG 283
Query: 296 TDVLVEEMETQ---TEAGGLATG---------KPLAKVLPQIEKTMNVITAEPSKNRFLQ 343
L++ M TE G PLAK++P I ++ I +E + + F+Q
Sbjct: 284 FSQLLDNMAEFFRPTEQDFSQNGSVNSLSSVSLPLAKIIPIINGQIHSICSE-TPSHFVQ 342
Query: 344 IIRDLPEVKLFFTLLYANMP 363
+ + ++K F +Y
Sbjct: 343 DLLMMEQMKDFAANVYEAFS 362
>ref|NP_064345.1| peroxisomal biogenesis factor 3 [Mus musculus]
sp|Q9QXY9|PEX3_MOUSE Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly
protein PEX3)
gb|AAF14524.1|AF152996_1 peroxisomal assembly protein PEX3 [Mus musculus]
gb|AAG24507.1| peroxisomal assembly protein PEX3P [Mus musculus]
gb|AAH37606.1| Peroxisomal biogenesis factor 3 [Mus musculus]
gb|AAH33415.1| Peroxisomal biogenesis factor 3 [Mus musculus]
dbj|BAE27544.1| unnamed protein product [Mus musculus]
Length = 372
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 86/383 (22%), Positives = 178/383 (46%), Gaps = 39/383 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ + F ++H++K + LG Y+L K R + + E + I + +
Sbjct: 2 LRSMWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL++W++LK
Sbjct: 55 QYHFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKS-----RPSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TTVLAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP-- 238
LSS L+ + + L++ ++ + + +L LK ++ L++ + +I + S
Sbjct: 165 LSSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWN 224
Query: 239 ------HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 225 DKDVSRSSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLLNETRDMLESPDFSTVLNTCL 283
Query: 293 KCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNR 340
L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 NRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSH 342
Query: 341 FLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 FVQDLLMMEQVKDFAANVYEAFS 365
>gb|EDL03500.1| peroxisomal biogenesis factor 3, isoform CRA_b [Mus musculus]
Length = 372
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 86/383 (22%), Positives = 178/383 (46%), Gaps = 39/383 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ + F ++H++K + LG Y+L K R + + E + I + +
Sbjct: 2 LRSMWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL++W++LK
Sbjct: 55 QYHFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKS-----RPSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TTILAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP-- 238
LSS L+ + + L++ ++ + + +L LK ++ L++ + +I + S
Sbjct: 165 LSSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWN 224
Query: 239 ------HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 225 DKDVSRSSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLLNETRDMLESPDFSTVLNTCL 283
Query: 293 KCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNR 340
L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 NRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSH 342
Query: 341 FLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 FVQDLLMMEQVKDFAANVYEAFS 365
>dbj|BAC35986.1| unnamed protein product [Mus musculus]
Length = 372
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 86/383 (22%), Positives = 178/383 (46%), Gaps = 39/383 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ + F ++H++K + LG Y+L K R + + E + I + +
Sbjct: 2 LRSMWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL++W++LK
Sbjct: 55 QYHFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKS-----RPSSKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TTVLAPPDVQQQY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP-- 238
LSS L+ + + L++ ++ + + +L LK ++ L++ + +I + S
Sbjct: 165 LSSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWN 224
Query: 239 ------HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISL 292
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 225 DKDVSRSSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLLNETRDMLESPDFSTVLNTCL 283
Query: 293 KCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNR 340
L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 284 NRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSH 342
Query: 341 FLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 FVQDLLMMEQVKDFAANVYEAFS 365
>ref|XP_001370565.1| PREDICTED: similar to peroxisomal biogenesis factor 3 [Monodelphis
domestica]
Length = 373
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 87/384 (22%), Positives = 181/384 (47%), Gaps = 40/384 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ V F ++H++K L LG Y+L K R + + E + I + +
Sbjct: 2 LKSVWNFLKRHKKKCLFLGTFLGGVYILGKYGQKKIREIQEKE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ ++ L P KL++W++LK
Sbjct: 55 QYHFESNQRTCNMTVL-SMLPTLRDALMQQLNSENLTALLKN-----RPSNKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L L + +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTL----LAPPEVQQRY 164
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGS--- 237
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I + S
Sbjct: 165 LSSIQHLLGDGLTELITVVKQAVQKILGSVSLKHSLSLLELEQKLKEIRKISEQHTSSSW 224
Query: 238 ------PHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
Y+M ++T L+ ++ ++ +L+ ETR++L S +F+ ++
Sbjct: 225 IDKTGPKSLLCQYMMPDEETPLAIQACGLTEGDITTI-KLLNETRDMLESPDFSTVLNTC 283
Query: 292 LKCFTDVLVEEME------------TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M + + + PLAK++P I ++ + +E + +
Sbjct: 284 LNRGFSRLLDNMAEFFRPTEQDLNHSDSMNSLSSVSLPLAKIIPIINGQIHSVCSE-TPS 342
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 343 HFVQDLLMMEQVKDFAANVYEAFS 366
>gb|AAM63222.1| unknown [Arabidopsis thaliana]
Length = 358
Score = 385 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 281/364 (77%), Positives = 318/364 (87%), Gaps = 6/364 (1%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MD VRG WRKHRRK+LVT CLGSGYLLYKLYN+HTR+LADLERELA+ERENDEIIKTQM
Sbjct: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQLW+ELK
Sbjct: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSHLL+E+DLI+RDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
L+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMSTGSPHH
Sbjct: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N+ EISLKC LV
Sbjct: 241 WVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLASNDFSNVAEISLKCCAVALV 297
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLFFTLLYA
Sbjct: 298 EEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 354
Query: 361 NMPQ 364
NMPQ
Sbjct: 355 NMPQ 358
>ref|NP_566598.1| PEX3-1 (PEROXIN 3-1) [Arabidopsis thaliana]
Length = 358
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 281/364 (77%), Positives = 318/364 (87%), Gaps = 6/364 (1%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
MD VRG WRKHRRK+LVT CLGSGYLLYKLYN+HTR+LADLERELA+ERENDEIIKTQM
Sbjct: 1 MDLVRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQM 60
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
KAHF++IQMI D+TTLPHA+ LS R+ EEIDVS +MD+L++GKG+L P EKLQLW+ELK
Sbjct: 61 KAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKGILIPSEKLQLWNELK 120
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLY+DTAR LGSSHLL+E+DLI+RDDEQKF
Sbjct: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 180
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
L+SADFL T+ MPSLIS+MQ + +EVLKGKQLKDV+TT L+ETVM+I+DVFMSTGSPHH
Sbjct: 181 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 240
Query: 241 WVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLV 300
WVDYLMM QD + T SSD V+KFH L+ ETREVL S +F+N+ EISLKC LV
Sbjct: 241 WVDYLMMSQD---ATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCCAVALV 297
Query: 301 EEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYA 360
EEMETQT GLATG LAK+LPQIEKTM I+AEP KNRFLQ+IRDLPEVKLFFTLLYA
Sbjct: 298 EEMETQT---GLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 354
Query: 361 NMPQ 364
NMPQ
Sbjct: 355 NMPQ 358
>ref|NP_956522.1| peroxisomal biogenesis factor 3 [Danio rerio]
gb|AAH46066.1| Peroxisomal biogenesis factor 3 [Danio rerio]
Length = 364
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 90/376 (23%), Positives = 172/376 (45%), Gaps = 33/376 (8%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ F ++H+RK + T +G YLL K + + + E + I + +
Sbjct: 2 LSSTWNFIKRHKRKFIFTGVFVGGVYLLGKYAQRKIQEMQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L I ++ + L P KL++W++LK
Sbjct: 55 QFHFESNQRTCNMTVL-SMLPTLREAIIHHLNSESLTTLLKTK-----PANKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G +LY+D + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYLYLDNSV-----TKNGMTPLAPPDVQQQY 163
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSS L+ + LI+ ++ + +EV LK ++ + L++ + QI + S +
Sbjct: 164 LSSIQHLLGEGLMELITVVKKAVQEVFGLVSLKQSLSLQELEQQLTQIRQLVEDDSSKYK 223
Query: 241 WVD-YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVL 299
+ Y+M ++ L+ ++ V+ +L+ ETR++L S +F ++ L
Sbjct: 224 GLSWYMMPDEENTLASQACGLTENDVTTI-KLLNETRDMLESPDFNIVLHTCLNRGFVRF 282
Query: 300 VEEME------------TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRD 347
++ M + T PLAK++P I ++ I +E + F+Q +
Sbjct: 283 LDNMAEFFRPPQRDSTPSSTPDQLSHVSLPLAKIIPIINGQIHSICSEI-PSHFVQDLLL 341
Query: 348 LPEVKLFFTLLYANMP 363
+ +VK F +Y
Sbjct: 342 IDQVKEFAANVYETFS 357
>ref|XP_001331521.1| PREDICTED: hypothetical protein [Danio rerio]
emb|CAI11651.1| novel protein similar to vertebrate peroxisomal biogenesis factor 3
(PEX3) (zgc:56313) [Danio rerio]
Length = 364
Score = 384 bits (986), Expect = e-105, Method: Composition-based stats.
Identities = 90/376 (23%), Positives = 172/376 (45%), Gaps = 33/376 (8%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ F ++H+RK + T +G YLL K + + + E + I + +
Sbjct: 2 LSSTWNFIKRHKRKFIFTGVFVGGVYLLGKYAQRKIQEMQERE-------AAEYIAQARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L I ++ + L P KL++W++LK
Sbjct: 55 QFHFESNQRTCNMTVL-SMLPTLREAIIHHLNSESLTALLKTK-----PANKLEIWEDLK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G +LY+D + L D +Q++
Sbjct: 109 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYLYLDNSV-----TKNGMTPLAPPDVQQQY 163
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 240
LSS L+ + LI+ ++ + +EV LK ++ + L++ + QI + S +
Sbjct: 164 LSSIQHLLGEGLMELITVVKKAVQEVFGLVSLKQSLSLQELEQQLTQIRQLVEDDSSKYK 223
Query: 241 WVD-YLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVL 299
+ Y+M ++ L+ ++ V+ +L+ ETR++L S +F ++ L
Sbjct: 224 SLSWYMMPDEENTLASQACGLTENDVTTI-KLLNETRDMLESPDFNIVLHTCLNRGFVRF 282
Query: 300 VEEME------------TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRD 347
++ M + T PLAK++P I ++ I +E + F+Q +
Sbjct: 283 LDNMAEFFRPPQRDSTPSSTPDQLSHVSLPLAKIIPIINGQIHSICSEI-PSHFVQDLLL 341
Query: 348 LPEVKLFFTLLYANMP 363
+ +VK F +Y
Sbjct: 342 IDQVKEFAANVYETFS 357
>ref|NP_001039031.1| peroxisomal biogenesis factor 3 [Xenopus tropicalis]
emb|CAJ83967.1| peroxisomal biogenesis factor 3 [Xenopus tropicalis]
gb|AAI54856.1| Peroxisomal biogenesis factor 3 [Xenopus tropicalis]
Length = 369
Score = 377 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 87/381 (22%), Positives = 173/381 (45%), Gaps = 37/381 (9%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
M + F ++H++K + G YLL K R + + E + I + +
Sbjct: 1 MLSMWNFLKRHKKKFIFVGAVAGGVYLLGKYAQRKIREIQERE-------AAEYIAQARR 53
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL++W++LK
Sbjct: 54 QYHFESNQRTCNMTVL-SMLPALREGLMQQLNSESLTSLLKNK-----PSNKLEIWEDLK 107
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SF+R +++++S ML + +RVQ+NI+G ++Y+D + + L+ + +Q++
Sbjct: 108 IISFSRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNSSLTKNGTTLQ----ASPEVQQQY 163
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF-------- 232
LSS L+ + + LI+ ++ + + VL LK + L++ + +I +
Sbjct: 164 LSSIQHLLGDGLSELITVVKQAVQGVLGSFSLKHCFSLTELEQKIKEIRSLVEKKKGSLN 223
Query: 233 -MSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
+ S YLM ++ L+ +++ V L+ ETR++L S +F ++
Sbjct: 224 GEESDSKSKLCQYLMPDEENPLTTQAYGLTEKDVLTIR-LLNETRDMLESEDFKTVLNSC 282
Query: 292 LKCFTDVLVEEM---------ETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFL 342
L L++ E + + PLAK++P I ++ I +E N F+
Sbjct: 283 LSRGFGRLLDSTAEFFRPTDREMNQDNTLHSISLPLAKIIPIINGQIHSICSEM-PNHFV 341
Query: 343 QIIRDLPEVKLFFTLLYANMP 363
Q + + +VK F +Y
Sbjct: 342 QDLLLMEQVKNFAANVYEAFS 362
>ref|XP_001817054.1| hypothetical protein [Aspergillus oryzae RIB40]
dbj|BAE55052.1| unnamed protein product [Aspergillus oryzae]
Length = 531
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 77/463 (16%), Positives = 169/463 (36%), Gaps = 112/463 (24%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
R ++R++R+ + + AG +G+GYL + S + +D I + ++
Sbjct: 5 TRRWFRRNRKGLAIGAGMIGAGYLAGQYVLSKISEARER-------MSSDRIARENLRRR 57
Query: 64 FESIQMIVDSTTLPHAMQF--------LSIRISEEID----------------------- 92
FE Q T L +++E+
Sbjct: 58 FEQNQTDCTYTVLALLPTAAEDILDALPVEELTKELQRKRAERLARLNAGEGTGSDLSSV 117
Query: 93 ----------------------VSHVMDRLNQGKGMLSPP-EKLQLWDELKILSFTRMVL 129
S + +G G P K QLW+E+KI S TR
Sbjct: 118 SPSLPEDDRRSLSSFQSDGFVRTSQPGEPFVEGDGEARPKRNKTQLWNEVKITSITRSFT 177
Query: 130 SLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLE-EVDLIDRDDE----------- 177
++++++L+++ R+Q+N+LGR Y+ + ++ + E + L D DD+
Sbjct: 178 LVYTLSLLTIFTRIQLNLLGRRNYLSSVISMATPPANESTIRLEDHDDDDLTQTLGNDFE 237
Query: 178 --QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST 235
+++L+ + +L+ L++++Q + EV ++ I+ L E +++
Sbjct: 238 TNRRYLAFSWWLLHRGWKQLMNEVQTAVTEVFGPLNPREDISLARLSELFLEVRKRVEGY 297
Query: 236 GSPH----HWVDYLMMP--------QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTE 283
W+ YL+ P +++ + T ++ + + L+ ET +++ S
Sbjct: 298 TEEERKHRKWLSYLLPPREEEDKVLEESGVLGVTELANSQTAATLRHLLDETADLIESPT 357
Query: 284 FTNIVEISLKCFTDVLVEEMETQ-----------------------TEAGGLATGKPLAK 320
FT ++ + L+ + A LA
Sbjct: 358 FTRVLMLLNNECFQTLIHQCTADAFKSTSQTPRSVPQSFTSVATVVPGADSSEPKAKLAN 417
Query: 321 VLPQIEKTMNVI-TAEPSKNRFLQIIRD-LPEVKLFFTLLYAN 361
+L + + +VI N +L + + E++ F ++Y++
Sbjct: 418 ILAVLARQAHVIGNGTNPPNLYLTAMDQGVRELEAFAAVVYSS 460
>ref|XP_659885.1| hypothetical protein AN2281.2 [Aspergillus nidulans FGSC A4]
gb|EAA64392.1| hypothetical protein AN2281.2 [Aspergillus nidulans FGSC A4]
Length = 530
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 75/452 (16%), Positives = 167/452 (36%), Gaps = 91/452 (20%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADL--ERELAHERENDEIIKT 58
+ R ++R++R+ + + G +G GYL + + +A E +
Sbjct: 2 ISATRRWFRRNRKTLAIGTGVIGVGYLAGQYVLGKISEARERMSSDRIARENLRRRFEQN 61
Query: 59 QMKAHFESIQMIVDS-----------------------------------------TTLP 77
Q + + ++ + + P
Sbjct: 62 QTDCTYTVLALLPTAAEDILEALPVEELTKELQKKRAERLARLNAGEGTATGSDMSSVAP 121
Query: 78 HAMQFLSIRISEE--IDVSHVMDRLNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVT 135
++ +S E + S + D K QLW+E+KI S TR +++++
Sbjct: 122 SLLEDDRKSVSSESFLRTSQLGDSAVDEDASQPKRNKTQLWNEVKITSITRAFTLIYTLS 181
Query: 136 MLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDE------------QKFLSS 183
+L+++ RVQ+N+LGR Y+ + +L + + L D DD+ +++L+
Sbjct: 182 LLTIFTRVQLNLLGRRNYLSSVISLATPADSSRITLEDHDDDLTQTLGNDFETNRRYLAF 241
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPH---- 239
+ +L+ L+ +++ + EV +D I+ L E +Q+
Sbjct: 242 SWWLLHRGWKQLMEEVKAAVVEVFGPLNPRDDISFDKLSELTLQVRKKIEGATEEERKRR 301
Query: 240 HWVDYLMMP--------QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
W+ YL+ P +++ + T S+ + + L+ ET +++ S FT + +
Sbjct: 302 KWLPYLLPPREDEDHLLEESGVLGVTEPSTPQTAATLRHLLDETADLIDSPTFTRVQMLL 361
Query: 292 LKCFTDVLVEEMETQTEAGGLATGKP---------------------LAKVLPQIEKTMN 330
+ L+++ +T P LA VL + + +
Sbjct: 362 NNECFETLIQQCKTDAFKSTGPVTAPQSFTSVATVIPVKENSELKTKLANVLAVLARQAH 421
Query: 331 VITAEPSKNRFLQIIR-DLPEVKLFFTLLYAN 361
I S N ++ + + E++ F ++Y++
Sbjct: 422 AIGNGTSPNIYVNAMDHGVRELEAFAAVVYSS 453
>ref|XP_001218024.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gb|EAU30539.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 525
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 76/456 (16%), Positives = 172/456 (37%), Gaps = 98/456 (21%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADL--ERELAHERENDEIIKTQMK 61
R ++R++R+ + + AG +G+GYL + S + +A E + Q
Sbjct: 5 TRRWFRRNRKPLAIGAGVIGAGYLAGQYVLSKISEARERMSSDRIARENLRRRFEQNQTD 64
Query: 62 AHFESIQMIVDS-------------------------------TTLPHAMQFLSIRISEE 90
+ + ++ + M L+ ++EE
Sbjct: 65 CTYTVLALLPTAAEDILEALPVEELTKELQKKRAERLARLNAAEGTGSDMTSLAPSLTEE 124
Query: 91 -------------IDVSHVMDRLNQGKGMLSPP-EKLQLWDELKILSFTRMVLSLWSVTM 136
+ S + + + P K QLW+E+KI S TR ++++++
Sbjct: 125 DRRSLSSFQSEGFVRTSQLTEAPGENDAESRPKKNKTQLWNEVKITSITRSFTLIYTLSL 184
Query: 137 LSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDE-------------QKFLSS 183
L+++ R+Q+N+LGR Y+ + +L + + L D DD+ +++L+
Sbjct: 185 LTIFTRIQLNLLGRRNYLSSVISLATPADASTIRLEDHDDDDLTQTLGNDFETNRRYLAF 244
Query: 184 ADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF----MSTGSPH 239
+ +L+ +L+ ++Q + EE ++ I+ L + +++
Sbjct: 245 SWWLLHCGWKNLMKEVQAAVEETFGPLNPREDISLGRLSDLTLEVRKRVEGATEEDRKHR 304
Query: 240 HWVDYLMMP--------QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
W+ YL+ P +++ + T S+ + + L+ ET +++ S FT I+ +
Sbjct: 305 KWLSYLLPPREEEDKLLEESGVLGVTEPSTSQTATTLRHLLDETADLIDSPTFTRIMMLL 364
Query: 292 LKCFTDVLVEEMETQ------------------------TEAGGLATGKPLAKVLPQIEK 327
+ L+++ A G LA VL + +
Sbjct: 365 NNECFETLIQQCTADAFKASPMRAPETDPQSFSSVATVVPGADGSEPKTKLANVLAVMAR 424
Query: 328 TMNVI-TAEPSKNRFLQIIRD-LPEVKLFFTLLYAN 361
+VI N ++ + + E++ F ++Y++
Sbjct: 425 QAHVIGNGTNPPNLYVTAMDQGVRELEAFAAVMYSS 460
>gb|EDL03499.1| peroxisomal biogenesis factor 3, isoform CRA_a [Mus musculus]
Length = 365
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 85/377 (22%), Positives = 171/377 (45%), Gaps = 41/377 (10%)
Query: 9 RKHRRKVLVTAGCLG--SGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFES 66
R+HR G Y+L K R + + E + I + + + HFES
Sbjct: 1 RRHRAAAGGPGQVDGRHGVYILGKYGQKKIREIQERE-------AAEYIAQARRQYHFES 53
Query: 67 IQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILSFTR 126
Q + T L + L + ++++ + L P KL++W++LKI+SFTR
Sbjct: 54 NQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKS-----RPSNKLEIWEDLKIISFTR 107
Query: 127 MVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSSADF 186
+++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++LSS
Sbjct: 108 SIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNG----TTILAPPDVQQQYLSSIQH 163
Query: 187 LVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP-------- 238
L+ + + L++ ++ + + +L LK ++ L++ + +I + S
Sbjct: 164 LLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDLEQKLKEIRILVEQHQSSWNDKDVSR 223
Query: 239 HHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDV 298
Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++ L
Sbjct: 224 SSLCQYMMPDEETPLAAQAYGLSHRDITTI-KLLNETRDMLESPDFSTVLNTCLNRGFSR 282
Query: 299 LVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIR 346
L++ M E + G + PLAK++P + ++ + +E + + F+Q +
Sbjct: 283 LLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCSE-TPSHFVQDLL 341
Query: 347 DLPEVKLFFTLLYANMP 363
+ +VK F +Y
Sbjct: 342 MMEQVKDFAANVYEAFS 358
>ref|NP_001085641.1| MGC82731 protein [Xenopus laevis]
gb|AAH73069.1| MGC82731 protein [Xenopus laevis]
Length = 372
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 88/384 (22%), Positives = 173/384 (45%), Gaps = 40/384 (10%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
M + F ++H++K + GS YLL K R + + E + I + +
Sbjct: 1 MLSMWNFLKRHKKKFIFVGAFAGSVYLLGKYAQRKIREIQERE-------AAEYIAQARR 53
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
+ HFES Q + T L + L + ++++ + L P KL +W++LK
Sbjct: 54 QYHFESNQRTCNMTVL-SMLPALREALMQQLNSESLTSLLKNK-----PSNKLDIWEDLK 107
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SF+R +++++S ML + +RVQ+NI+G ++Y+D + + L+ + +Q++
Sbjct: 108 IISFSRSIVAIYSTCMLVVLLRVQLNIIGGYIYLDNSSVTKNGTALQ----ASPEVQQQY 163
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF-------- 232
LSS L+ + + LI+ ++ + +EVL LK + L++ + +I +
Sbjct: 164 LSSIQHLLGDGLTELITVVKQAVQEVLGSFSLKHSFSLIELEQKIKEIRSLVEKKRGSLN 223
Query: 233 -MSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
+ YLM ++ L+ +++ V L+ ETR++L S +F ++
Sbjct: 224 GEESDGKVRLCQYLMSDEENPLTTQAYGLTEKDVKTIR-LLNETRDMLESEDFNTVLNSC 282
Query: 292 LKCFTDVLVEE------------METQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ + T + PLAK++P I ++ I +E N
Sbjct: 283 LSRGFGRLLDSTAEFFRPADQELKQHNTMHSLSSISLPLAKIIPIINGQIHSICSE-LPN 341
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 342 HFVQDLLLMEQVKDFAANVYEAFS 365
>emb|CAO68158.1| unnamed protein product [Vitis vinifera]
Length = 375
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 224/366 (61%), Positives = 281/366 (76%), Gaps = 8/366 (2%)
Query: 6 GFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFE 65
FWR+HRRK+ V+ G GSGYLLYKLY++H RRL DLERELA +REN+E+IK QM+AHFE
Sbjct: 8 DFWRRHRRKIFVSVGVFGSGYLLYKLYDAHRRRLDDLERELAVQRENEELIKAQMQAHFE 67
Query: 66 SIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLS---PPEKLQLWDELKIL 122
SIQ I D+TTLPH+M +LS RI+EE+D+SH+ +RL +GKG + P EKL+LWD LKIL
Sbjct: 68 SIQRIADTTTLPHSMLYLSGRIAEELDLSHLTERLMKGKGQPNTLTPSEKLELWDRLKIL 127
Query: 123 SFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLS 182
SFTRMVLSLW++TMLSLYIRVQVNILGRHLY+DTAR GSSHLLEE D IDR D+QKFL+
Sbjct: 128 SFTRMVLSLWAMTMLSLYIRVQVNILGRHLYIDTARGGGSSHLLEEADPIDRHDQQKFLA 187
Query: 183 SADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWV 242
SADFL ++P+LIS+M +A EVLKGKQL+DV + VL T+MQI+D+F+STG PH+ V
Sbjct: 188 SADFLSNYSIPALISNMHAAAAEVLKGKQLRDVFNSMVLHGTIMQILDLFISTGKPHNLV 247
Query: 243 DYLMMPQ---DTKLSRTTSDSS-DEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDV 298
DYLM S + DSS V+KF QLMVETR VL S EF N++++SL+ D
Sbjct: 248 DYLMPDDTKSYKPASPSNGDSSTPADVTKFDQLMVETRAVLSSAEFINVIDVSLRTVVDA 307
Query: 299 LVEEME-TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTL 357
+VE+M Q G ++G LAK+LP++ + ++ EPSKNRF+QII+ PEV+ FFTL
Sbjct: 308 VVEDMMGVQLGGGSPSSGMVLAKLLPRVAQMGPLLLEEPSKNRFIQIIQKAPEVEFFFTL 367
Query: 358 LYANMP 363
LYANMP
Sbjct: 368 LYANMP 373
>gb|AAG50845.1|AC074308_1 hypothetical protein, 3' partial [Arabidopsis thaliana]
Length = 443
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 330/366 (90%), Positives = 331/366 (90%), Gaps = 30/366 (8%)
Query: 11 HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ----------- 59
HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQ
Sbjct: 8 HRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQLSSVLIKTDPL 67
Query: 60 -------------------MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL 100
MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL
Sbjct: 68 DFSSYGFSNGPVLFVLLFRMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRL 127
Query: 101 NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL 160
NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL
Sbjct: 128 NQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARAL 187
Query: 161 GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV 220
GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV
Sbjct: 188 GSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRV 247
Query: 221 LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI 280
LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI
Sbjct: 248 LQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLI 307
Query: 281 STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR 340
STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR
Sbjct: 308 STEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNR 367
Query: 341 FLQIIR 346
+
Sbjct: 368 LSDKMY 373
>gb|ABH11414.1| peroxin 3 [Penicillium chrysogenum]
Length = 568
Score = 365 bits (939), Expect = 2e-99, Method: Composition-based stats.
Identities = 81/463 (17%), Positives = 168/463 (36%), Gaps = 112/463 (24%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
R +++++R+ + + AG +G+GYL + S + +D I + ++
Sbjct: 5 TRRWFQRNRKGLAIGAGVIGAGYLAGQYVLSKISEARER-------MSSDRIARENLRRR 57
Query: 64 FESIQMIVDSTTLPHAMQF--------LSIRISEEID----------------------- 92
FE Q T L +++E+
Sbjct: 58 FEQNQTDCTYTVLALLPTAAENIIDALPVEELTKELQQKRAERLARLNAGEATGSDLSSV 117
Query: 93 ----------------------VSHVMDRLNQGKGMLSPP-EKLQLWDELKILSFTRMVL 129
S V D G P K QLW+E+KI S TR
Sbjct: 118 PPSLPDDDRRSLSSFQSEGYVHASQVGDSSVNSDGQPRPKRNKTQLWNEVKITSVTRSFT 177
Query: 130 SLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLL-EEVDLIDRDDE----------- 177
++++++L+++ +Q+N+LGR Y+ + +L + + L D DDE
Sbjct: 178 MIYTLSLLTIFTHIQLNLLGRRNYLSSVISLATPPANASTIRLEDHDDELTQTLGDDFET 237
Query: 178 -QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTG 236
+++L+ + +L+ L+ +Q + EEV ++ I+ L E +QI +
Sbjct: 238 NRRYLAFSWWLLHRGWKDLMGRVQVAVEEVFGPLNPREDISLAKLSELTLQIRKKVEGST 297
Query: 237 SPH----HWVDYLMMP--------QDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEF 284
W+ L+ P Q++ + SS + SK L+ ET +++ S F
Sbjct: 298 EDERRSQKWLSCLLPPAEEEEHVLQESGVEGVADPSSSQTASKLRHLLDETADLIDSPSF 357
Query: 285 TNIVEISLKCFTDVLVEE-METQTEAGGLATG-----------------------KPLAK 320
+ ++ + L+++ + LA
Sbjct: 358 SLVLTLLNNEGFSTLIDQRCAADAFKAPTSNPEAPLQSFDSVATVVPLAANSERKTKLAN 417
Query: 321 VLPQIEKTMNVITAEP-SKNRFLQII-RDLPEVKLFFTLLYAN 361
+L + + +VI N +L + +++ E++ F ++Y++
Sbjct: 418 LLAVMTRQAHVIGNGAHPPNEYLVAMDQNVRELEAFSAVVYSS 460
>ref|XP_001507262.1| PREDICTED: similar to peroxisomal biogenesis factor 3
[Ornithorhynchus anatinus]
Length = 360
Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats.
Identities = 85/361 (23%), Positives = 169/361 (46%), Gaps = 40/361 (11%)
Query: 24 SGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFESIQMIVDSTTLPHAMQFL 83
YLL K + + + E + I + + + HFES Q + T L + L
Sbjct: 12 GVYLLGKYGQKKIKEIQERE-------AAEYIAQARRQYHFESNQRTCNMTVL-SMLPAL 63
Query: 84 SIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRV 143
+ ++++ + L P KL++WD+LKI+SFTR +++++S ML + +RV
Sbjct: 64 RDALMQQLNSESLTALLKS-----RPSNKLEIWDDLKIISFTRSIVAVYSTCMLVVLLRV 118
Query: 144 QVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSA 203
Q+NI+G ++Y+D A + +L L D +Q++LSS L+ + + LI+ ++ +
Sbjct: 119 QLNIIGGYIYLDNAAVGKNGTML----LAPPDVQQQYLSSIHHLLGDGLTELITVVKQAV 174
Query: 204 EEVLKGKQLKDVITTRVLQETVMQIVDV---------FMSTGSPHHWVDYLMMPQDTKLS 254
+++L LK ++ L++ V +I + +TG Y+M ++T L+
Sbjct: 175 QKILGSVSLKHSMSLLDLEQKVKEIRKITEEQKPPSWVDTTGPRSLLCHYMMPDEETPLA 234
Query: 255 RTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEME---------- 304
+ V+ +L+ ETR++L S +F+ ++ L L++ M
Sbjct: 235 TQACGLTAGDVTTI-KLLNETRDMLESPDFSTVLNTCLNRGFSRLLDNMAEFFRPTEQDL 293
Query: 305 --TQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYANM 362
+ + PLAK++P I ++ + +E + + F+Q + + +VK F +Y
Sbjct: 294 QRKDSMNSLSSVSLPLAKIIPIINGQVHAVCSE-TPSHFVQDLLMMEQVKDFAANVYEAF 352
Query: 363 P 363
Sbjct: 353 S 353
>ref|XP_001176855.1| PREDICTED: similar to peroxisomal biogenesis factor 3
[Strongylocentrotus purpuratus]
Length = 388
Score = 361 bits (927), Expect = 6e-98, Method: Composition-based stats.
Identities = 92/381 (24%), Positives = 177/381 (46%), Gaps = 34/381 (8%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ + F ++HRRK LV G LLYK + + E E + + +
Sbjct: 2 LGSIWNFVKRHRRKFLVLGAVAGGASLLYKYAEWKLKEWRETE-------EAECLAMARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
HFES Q + T L + L + ++ ++ +L G K+ +W+ELK
Sbjct: 55 AHHFESNQRTCNMTVL-SMIPKLRELLLYHLNSEELIQKLKSG-----TENKVVVWNELK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
++SFTRMV+S++S +L+ ++RVQ+NILG ++Y+DT G + L +D ++++
Sbjct: 109 VVSFTRMVVSVYSTVLLTAFLRVQLNILGGYMYLDTLA--GKNGLTYYQVHATQDVQKEY 166
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS------ 234
L+ +L+T+ + LI+ +Q + V+ L+ +++ ++E + ++ +
Sbjct: 167 LAMVQYLLTDGLTELINHVQEVVQNVVGSISLQQLLSLSDMEEIIAKVRGQVETTQYGGE 226
Query: 235 ----TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEI 290
S H YL+ P+ + SD+ + Q+ +ETR+++ S +F+ ++
Sbjct: 227 VVVPDCSIHPLGRYLLKPEGLDGEESACRLSDDQLV-LSQMQIETRDLVESHDFSCVMNS 285
Query: 291 SLKCFTDVLVEEME-----TQTEAGGLATGKPL--AKVLPQIEKTMNVITAEPSKNRFLQ 343
L L++ M T G G L AK +P + +N + + + N F+Q
Sbjct: 286 CLDIGFSRLLDNMAEFFRPVTTRNGESPCGLKLAMAKAIPIVNGQVNALCCD-TPNHFIQ 344
Query: 344 IIRDLPEVKLFFTLLYANMPQ 364
+ + VK F + +Y Q
Sbjct: 345 ELLLMQCVKDFASNVYEGFSQ 365
>ref|XP_780894.2| PREDICTED: similar to peroxisomal biogenesis factor 3
[Strongylocentrotus purpuratus]
Length = 388
Score = 360 bits (926), Expect = 7e-98, Method: Composition-based stats.
Identities = 92/381 (24%), Positives = 177/381 (46%), Gaps = 34/381 (8%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ + F ++HRRK LV G LLYK + + E E + + +
Sbjct: 2 LGSIWNFVKRHRRKFLVLGAVAGGASLLYKYAEWKLKEWRETE-------EAECLAMARR 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
HFES Q + T L + L + ++ ++ +L G K+ +W+ELK
Sbjct: 55 AHHFESNQRTCNMTVL-SMIPKLRELLLYHLNSEELIQKLKSG-----TENKVVVWNELK 108
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
++SFTRMV+S++S +L+ ++RVQ+NILG ++Y+DT G + L +D ++++
Sbjct: 109 VVSFTRMVVSVYSTVLLTAFLRVQLNILGGYMYLDTLA--GKNGLTYYQVHATQDVQKEY 166
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMS------ 234
L+ +L+T+ + LI+ +Q + V+ L+ +++ ++E + ++ +
Sbjct: 167 LAMVQYLLTDGLTELINHVQEVVQNVVGSISLQQLLSLSDMEEIIAKVRGQVETTQYGGE 226
Query: 235 ----TGSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEI 290
S H YL+ P+ + SD+ + Q+ +ETR+++ S +F+ ++
Sbjct: 227 VVVPDCSIHPLGRYLLKPEGLDGEESACRLSDDQLV-LSQMQIETRDLVESHDFSCVMNS 285
Query: 291 SLKCFTDVLVEEME-----TQTEAGGLATGKPL--AKVLPQIEKTMNVITAEPSKNRFLQ 343
L L++ M T G G L AK +P + +N + + + N F+Q
Sbjct: 286 CLDIGFSRLLDNMAEFFRPVTTRNGESPCGLKLAMAKAIPIVNGQVNALCCD-TPNHFIQ 344
Query: 344 IIRDLPEVKLFFTLLYANMPQ 364
+ + VK F + +Y Q
Sbjct: 345 ELLLMQCVKDFASNVYEGFSQ 365
>ref|XP_001497293.1| PREDICTED: similar to peroxisomal biogenesis factor 3 [Equus
caballus]
Length = 481
Score = 359 bits (921), Expect = 3e-97, Method: Composition-based stats.
Identities = 87/368 (23%), Positives = 170/368 (46%), Gaps = 51/368 (13%)
Query: 8 WRKHRRKVLVT--AG---CLGSG------YLLYKLYNSHTRRLADLERELAHERENDEII 56
W+ R K L AG +G G Y+L K R + + E + I
Sbjct: 131 WKSRREKALAGCCAGALRIVGIGTAPARVYILGKYGQKKIREMQERE-------AAEYIA 183
Query: 57 KTQMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLW 116
+ + + HFES Q + T L + L + ++++ + L P KL++W
Sbjct: 184 QARRQYHFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALLKN-----RPSNKLEIW 237
Query: 117 DELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDD 176
++LKI+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D
Sbjct: 238 EDLKIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTVLAPPDV 293
Query: 177 EQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST- 235
+Q++LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++
Sbjct: 294 QQQYLSSIQHLLGDGLTELITVIKQAVQKILGSISLKHSLSLLDLEQKLKEIRNLVEQHK 353
Query: 236 --------GSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNI 287
GS Y+M ++T L+ S V+ +L+ ETR++L S +F+ +
Sbjct: 354 SSSWINKDGSKSLLCHYMMPDEETPLAVQAYGLSPRDVTTI-KLLNETRDMLESPDFSTV 412
Query: 288 VEISLKCFTDVLVEEME-------TQTEAG-----GLATGKPLAKVLPQIEKTMNVITAE 335
+ L L++ M + G + PLAK++P + ++ + +E
Sbjct: 413 LSTCLNRGFSRLLDNMAEFFRPTDQDLQQGSSMDSLSSVSLPLAKIIPIVNGQIHSVCSE 472
Query: 336 PSKNRFLQ 343
+ + F+Q
Sbjct: 473 -TPSHFVQ 479
>ref|XP_387118.1| hypothetical protein FG06942.1 [Gibberella zeae PH-1]
Length = 523
Score = 354 bits (909), Expect = 7e-96, Method: Composition-based stats.
Identities = 70/458 (15%), Positives = 161/458 (35%), Gaps = 99/458 (21%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADL--ERELAHERENDEIIKT 58
+ R + R +R + V G +G+GY+ + + +A E +
Sbjct: 2 LTSARRWLRNNRTPIAVGVGVIGAGYVATQYVIGKLNDARERMSSDRIAKENLRRRFEQN 61
Query: 59 QMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQG--------------- 103
Q F + ++ +TT + +I+ EI + G
Sbjct: 62 QEDCTFTVLALLPSATT-AIIEAMNTEQITLEIQQMKATKAIKNGGNESAAPPSLADTTL 120
Query: 104 -----------------------------------KGMLSPPEKLQLWDELKILSFTRMV 128
+ K QLWD++ I + TR
Sbjct: 121 TEEDGKSMAGQSESGVHPSQIPTSSPFNAGGETNKEAPKLRKTKRQLWDDVTISAVTRSF 180
Query: 129 LSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDE----------- 177
++++ +L++ RVQ+N+LGR Y+ + AL + + L + DD+
Sbjct: 181 TLIYTLALLTMLTRVQLNLLGRRSYLSSVVALATGGQHGTISLENNDDDNTEQAYGSDFD 240
Query: 178 --QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST 235
+K+L+ + +L+ L+ ++ + V +D+++ E M++ + +
Sbjct: 241 INRKYLTFSWWLLNKGWKDLMHRVESAVRTVFGSLSPRDLLSFERFSELTMEVRKLVEGS 300
Query: 236 GSPHH----WVDYLMMPQDTKLSRTTSDSSDEAVSK-------------FHQLMVETREV 278
+ W+ +L+ P+D + + + +L+ ET ++
Sbjct: 301 TNEERRKSDWLHFLLPPRDMEDEVIKESGILDETANHDPEHSPAASQAILRRLLDETADL 360
Query: 279 LISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLAT---------------GKPLAKVLP 323
+ S FT+++ + L L + A+ L K++
Sbjct: 361 IESPSFTHVLTLLLDAGFSYLTDNKLATAAFELPASDGIVTPELKDQQRSKVILLPKIMS 420
Query: 324 QIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYAN 361
+ + +VI + N +LQ + + +++ F ++Y++
Sbjct: 421 VLTRQAHVI-GDGMPNEYLQKMETVRDLEAFAAVVYSS 457
>ref|XP_001398373.1| hypothetical protein An17g01440 [Aspergillus niger]
emb|CAK43040.1| unnamed protein product [Aspergillus niger]
Length = 533
Score = 345 bits (885), Expect = 5e-93, Method: Composition-based stats.
Identities = 81/466 (17%), Positives = 173/466 (37%), Gaps = 112/466 (24%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ + ++R++R+ + + AG +G+GYL + S + +D I + +
Sbjct: 2 ISATKRWFRRNRKGLAIGAGVIGAGYLAGQYLLSKISEARER-------MSSDRIARENL 54
Query: 61 KAHFESIQMIVDSTTLPHAMQF--------LSIRISEEID-------------------- 92
+ FE Q T L +++E+
Sbjct: 55 RRRFEQNQTDCTYTVLALLPTAAEDILEALPVEELTKELQKKRAERLARLNAGEGTGSDL 114
Query: 93 -------------------------VSHVMDRLNQGKGMLSPP-EKLQLWDELKILSFTR 126
S + + +G G P K QLW+E+KI S TR
Sbjct: 115 SSVGPSITDDDRRSLSSFQSDGFVRTSQLGESTIEGSGSPRPKRNKTQLWNEVKITSITR 174
Query: 127 MVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHL-LEEVDLIDRDDE-------- 177
++++T+L+++ R+Q+N+LGR Y+ + ++ + + L D DD+
Sbjct: 175 SFTLIYTLTLLTIFTRIQLNLLGRRNYLSSVISMATPPADGSTIRLEDHDDDDLTQTLGN 234
Query: 178 -----QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF 232
+++L+ + +L+ L+ ++Q + EV ++ I+ L E ++Q+
Sbjct: 235 DFETNRRYLAFSWWLLHRGWKQLMEEVQAAVTEVFGPLNPREDISVSKLSELILQVRGKI 294
Query: 233 ----MSTGSPHHWVDYLMMP--------QDTKLSRTTSDSSDEAVSKFHQLMVETREVLI 280
W+ Y++ Q++ + T ++ + + L+ ET +++
Sbjct: 295 EGVTEEDRKYRKWLSYVLPSREEEDHLLQESGVLGVTEPATPQTTASLRHLLDETADLID 354
Query: 281 STEFTNIVEISLKCFTDVLVEEMETQ-----------------------TEAGGLATGKP 317
S FT ++ + L+E+ + A G T
Sbjct: 355 SPTFTRVMLLLNNECFQTLIEQCKADAFKSSTQVPTSVPQSFTSVATVVPAADGSDTKTK 414
Query: 318 LAKVLPQIEKTMNVI-TAEPSKNRFLQIIRD-LPEVKLFFTLLYAN 361
LA VL + + +VI N +L I + E++ F ++Y++
Sbjct: 415 LANVLAVLARQAHVIGNGTAPPNLYLTSIEQGVRELEAFAAVIYSS 460
>ref|NP_001062839.1| Os09g0314300 [Oryza sativa (japonica cultivar-group)]
dbj|BAD33995.1| peroxisomal biogenesis factor 3-like [Oryza sativa Japonica Group]
dbj|BAF24753.1| Os09g0314300 [Oryza sativa (japonica cultivar-group)]
Length = 380
Score = 340 bits (874), Expect = 7e-92, Method: Composition-based stats.
Identities = 165/377 (43%), Positives = 237/377 (62%), Gaps = 15/377 (3%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ RGFW +HRRK+LV+ G G+GY Y+ +SH R+L +E+ ER +EIIK Q+
Sbjct: 2 LASARGFWGRHRRKILVSLGVAGAGYAAYRYLDSHRRQLVRVEQRALEERAAEEIIKNQL 61
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLS-----PPEKLQL 115
+ HFE++Q I D+TTLP AM +L RI EE+D+SH+ ++L GKG S P EK
Sbjct: 62 QTHFENVQKISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDT 121
Query: 116 WDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRD 175
W+++KILSFTR V S+W++T+LSLY+RVQV ILGRHLY+D AR + L E D +
Sbjct: 122 WEKIKILSFTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQLQEGSDTFSKS 181
Query: 176 DEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST 235
+ FL++AD+L T + +LI+ MQ +A E+LK KQLKD + + ET++QI+ FM
Sbjct: 182 GHKDFLATADYLATYGINALITKMQHAATEILKEKQLKDPMGIDEVLETILQILKQFMGL 241
Query: 236 GSPHHWVDYLMMPQDTKLSRTTSDSSD---------EAVSKFHQLMVETREVLISTEFTN 286
+ W++Y ++P++ + S + V K QLM ETR VL S +F N
Sbjct: 242 CEDNSWINY-LVPENANVYAQLMAVSSSGFDDSSLLKDVRKLDQLMSETRIVLSSDDFRN 300
Query: 287 IVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIR 346
I++ SLK V+VE++ Q A G PLAK+L ++ + + EP KN+ +QIIR
Sbjct: 301 IMDRSLKKIASVVVEDLAVQIGAPIPPPGLPLAKLLAKVAQLSLPLLEEPDKNKHIQIIR 360
Query: 347 DLPEVKLFFTLLYANMP 363
+PEV+LF+T LYANMP
Sbjct: 361 SMPEVELFYTFLYANMP 377
>ref|XP_001242086.1| hypothetical protein CIMG_05982 [Coccidioides immitis RS]
gb|EAS30503.1| hypothetical protein CIMG_05982 [Coccidioides immitis RS]
Length = 556
Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats.
Identities = 80/461 (17%), Positives = 165/461 (35%), Gaps = 108/461 (23%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ R + R+HR+ + + AG +G GYL + S ++ ++ I + +
Sbjct: 32 ISATRRWLRQHRKGLAIGAGVVGIGYLATQYVFSKISEASER-------MSSERIARENL 84
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLN------------------- 101
+ FE Q T L + I + V + + L
Sbjct: 85 RRRFEQNQSDCTFTVLALLPTA-TENILAALPVEELTNELQQKRAARLAKLTASEMQGSE 143
Query: 102 -------------------------------QGKGMLSPPEKLQLWDELKILSFTRMVLS 130
G+ + QLW++LKI S TR
Sbjct: 144 MSSGPPSMTEDDVSSLRSDNYVHASQVVDSTTGEQAQRAKSRTQLWNDLKINSLTRSFTL 203
Query: 131 LWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDD------------EQ 178
L+++++L+L R+Q+N+LGR Y+ + AL S ++ DD +
Sbjct: 204 LYTLSLLTLLTRIQLNLLGRRNYLSSVVALASPPQNPSTISLEDDDNPEHSFGNDFETNR 263
Query: 179 KFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSP 238
++L+ + +L+ L+++++ + ++V ++ IT L E + + S
Sbjct: 264 RYLTFSWWLLHRGWKDLMAEVEAAVKDVFGEVNPREDITHEKLSELTLAVRKRVEGATSG 323
Query: 239 H----HWVDYLMMPQDTKLSRTTSDS-------SDEAVSKFHQLMVETREVLISTEFTNI 287
W+ YL+ P++ + S ++ + L+ ET +++ S FT++
Sbjct: 324 ERRVRKWLPYLLPPREQEDFVLQESGVLSATEASPQSAATLRHLLDETSDLIDSPSFTHV 383
Query: 288 VEISLKCFTDVLVEEMETQ-------------------------TEAGGLATGKPLAKVL 322
+ L++ A A LA +L
Sbjct: 384 FSLLNNEAFSHLIDTKCATEAFKGLSQAQKKDQSPPFSSTATMVPVAEPSAPKTKLASIL 443
Query: 323 PQIEKTMNVI-TAEPSKNRFLQIIR-DLPEVKLFFTLLYAN 361
I + +VI N +L I+ ++ E++ F ++Y++
Sbjct: 444 AVISRQSHVIGNGTNPPNEYLSIMEREVRELEAFAAVIYSS 484
>ref|XP_001555052.1| hypothetical protein BC1G_06575 [Botryotinia fuckeliana B05.10]
gb|EDN26165.1| hypothetical protein BC1G_06575 [Botryotinia fuckeliana B05.10]
Length = 519
Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats.
Identities = 80/479 (16%), Positives = 170/479 (35%), Gaps = 117/479 (24%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHT-----RRLADLERELAHERENDEI 55
M+ +R + R++R + + G +G GY+ + R +D + EI
Sbjct: 1 MNSLRKWARRNRTPLAIGFGVIGVGYVATQYVLGKIHDARQRMSSDRIAREKYSLIPTEI 60
Query: 56 ------IKTQMKAHFESIQMIVDSTTLPHAMQFL--------SIRISEEIDVSHVMDRLN 101
+ ++ FE Q T L + RI++E+ +
Sbjct: 61 VTYAYPLILSLRRRFEQNQEDCTYTVLALLPTATENILAELKTERITDELQQQKAAKQAR 120
Query: 102 Q-------------------GKGMLS---------------------------------- 108
G+ M+S
Sbjct: 121 NGGDRRSDWGSSPPSITDDDGRSMVSFSDSGMHISQLGIPSGSEFGGDGAQDGGQQGEQQ 180
Query: 109 ----PPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSH 164
K+QLW++LKI S TR ++++++L+L R+Q+N+LGR Y+ + +L +
Sbjct: 181 VQKIKRSKMQLWNDLKISSITRSFTLIYTLSLLTLLTRIQLNLLGRRSYLSSVVSLATGG 240
Query: 165 -LLEEVDLIDRDDE-------------QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGK 210
+ L + DD+ +++L+ + +L+ ++ ++ + +EV K
Sbjct: 241 VEQSTISLENNDDDNSDQAYGNDFETNRRYLTFSWWLLHRGWRDVMFKVEAAVKEVFKDT 300
Query: 211 QLKDVITTRVLQETVMQIVDVFM----STGSPHHWVDYLMMPQDTKLSRTTSDS------ 260
+++ +T E +++ W+ YL+ P+D +
Sbjct: 301 SIREELTMAKFSELTLEVRKKVEGATPEDRQATRWLQYLLPPRDQEDFVIKESGMKTMEP 360
Query: 261 ---SDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEMETQTEAGGL----- 312
S VS +L+ ET +++ S F++++ + L LVE+ Q
Sbjct: 361 ETPSSSPVSPLRRLLDETSDLIDSPPFSHVLTMLLDAGFSTLVEQKIAQQSFKIPSQPED 420
Query: 313 --------ATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYANMP 363
L +L + + + I N +LQ + + E++ F ++Y++
Sbjct: 421 ARVTEIVEPNSVKLPLILAVLTRQAHSI-GNGVPNEYLQAMEQVRELEAFAAVVYSSHE 478
>ref|XP_001273964.1| peroxisomal membrane protein (Pex3), putative [Aspergillus clavatus
NRRL 1]
gb|EAW12538.1| peroxisomal membrane protein (Pex3), putative [Aspergillus clavatus
NRRL 1]
Length = 533
Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats.
Identities = 74/463 (15%), Positives = 168/463 (36%), Gaps = 112/463 (24%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
R ++R++R+ + + AG +G+GYL + S + +D I + ++
Sbjct: 5 TRRWFRRNRKGLAIGAGIIGAGYLAGQYVLSKITEARER-------MSSDRIARENLRRR 57
Query: 64 FESIQMIVDSTTLPHAMQF--------LSIRISEEID----------------------- 92
FE Q T L +++E+
Sbjct: 58 FEQNQTDCTYTVLALLPTAAEEILEALPVEALTKELQKKRAERLARLQAGEGTVSDLSSV 117
Query: 93 ----------------------VSHVMDRLNQGKGMLS-PPEKLQLWDELKILSFTRMVL 129
S + + +G + K QLW+E+KI S TR
Sbjct: 118 SPSIAEDDRRSLSSFQSDGFVRTSQLGESTIEGDALPRVKRNKTQLWNEVKITSITRSFT 177
Query: 130 SLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLL-EEVDLIDRDDE----------- 177
++++++L+++ R+Q+N+LGR Y+ + +L + + L D DD+
Sbjct: 178 LIYTLSLLTIFTRIQLNLLGRRNYLSSVISLATPPANASTIKLEDHDDDDLTQTLGNDFE 237
Query: 178 --QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFM-- 233
+++L+ + +L+ L++++Q + EV ++ IT L + I
Sbjct: 238 TNRRYLAFSWWLLHRGWKELMNEVQAAVTEVFGSLNPREDITVGRLSALTLDIRKKVEGT 297
Query: 234 --STGSPHHWVDYLMMPQ--------DTKLSRTTSDSSDEAVSKFHQLMVETREVLISTE 283
W+ YL+ + ++ + T ++ ++ S L+ ET +++ S
Sbjct: 298 TPEDRRSRKWLSYLLPLRDEEDHLLKESGVLGVTEPATSQSASTLRHLLDETADLIDSPT 357
Query: 284 FTNIVEISLKCFTDVLVEEMETQTEAGGLATG-----------------------KPLAK 320
F +++ +L+ ++ + LA
Sbjct: 358 FGRVLQALNDECFGLLMGQIIKEAFQSPSQGPESAPQSFTSIATVVPPVKTVDLKTKLAN 417
Query: 321 VLPQIEKTMNVI-TAEPSKNRFLQII-RDLPEVKLFFTLLYAN 361
VL + + +VI N +L + +++ ++ F ++Y++
Sbjct: 418 VLAVMARQAHVIGNGTNPPNVYLTAMDQNVRNLEAFAAVIYSS 460
>ref|XP_001266008.1| peroxisomal membrane protein (Pex3), putative [Neosartorya fischeri
NRRL 181]
gb|EAW24111.1| peroxisomal membrane protein (Pex3), putative [Neosartorya fischeri
NRRL 181]
Length = 529
Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats.
Identities = 80/463 (17%), Positives = 172/463 (37%), Gaps = 113/463 (24%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
R ++R++R+ + + AG +G+GYL + S + +D I + ++
Sbjct: 5 TRRWFRRNRKGLAIGAGIIGAGYLAGQYVLSKITEARER-------MSSDRIARENLRRR 57
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVM-----------DRLNQGKGMLS---- 108
FE Q T L + I E + V + RL G+G +S
Sbjct: 58 FEQNQTDCTYTVLALLPTA-AEGILEALPVEELTKELQKKRAERLARLQAGEGTVSDLSS 116
Query: 109 ----------------------------------------PPEKLQLWDELKILSFTRMV 128
K QLW+E+KI S TR
Sbjct: 117 VSPSAADDDRRSLSSFQSDGFVRTSQLGEPSFDGEGPARVKRNKTQLWNEVKITSVTRSF 176
Query: 129 LSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHL-LEEVDLIDRDDE---------- 177
++++++L+++ R+Q+N+LGR Y+ + +L + + L D DD+
Sbjct: 177 TLIYTLSLLTIFTRIQLNLLGRRNYLSSVISLATPPADASTIKLEDHDDDLTQTLGNDFE 236
Query: 178 --QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFM-- 233
+++L+ + +L+ L++++Q + + ++ I+ L E + I
Sbjct: 237 TNRRYLAFSWWLLHRGWKDLMNEVQAAVADAFGSLNPREDISVGRLSELTLDIRKKVEGN 296
Query: 234 --STGSPHHWVDYLMMPQ--------DTKLSRTTSDSSDEAVSKFHQLMVETREVLISTE 283
W+ YL+ P+ ++ ++ T S+ ++ S L+ ET +++ S
Sbjct: 297 TPEERRSRRWLPYLLPPREEEEHLLEESGVAGVTEPSTSQSASTLRHLLDETADLIESPT 356
Query: 284 FTNIVEISLKCFTDVLVEEMETQTEAGGLATG-----------------------KPLAK 320
F +++ D+L++ + LA
Sbjct: 357 FGRVLQGLNDECFDLLMQNCIKEAFQSSPQASESVPQSFTSVATVVPQVKTADLKTKLAN 416
Query: 321 VLPQIEKTMNVI-TAEPSKNRFLQII-RDLPEVKLFFTLLYAN 361
VL + + +VI N +L + +++ ++ F ++Y++
Sbjct: 417 VLAVMARQAHVIGNGTNPPNIYLTAMDQNVRNLEAFAAVIYSS 459
>ref|XP_369909.2| hypothetical protein MGG_06424 [Magnaporthe grisea 70-15]
gb|EDK00651.1| hypothetical protein MGG_06424 [Magnaporthe grisea 70-15]
Length = 455
Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats.
Identities = 79/415 (19%), Positives = 156/415 (37%), Gaps = 59/415 (14%)
Query: 2 DFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLEREL-------------AH 48
R + R++R + V AG +G+GYL+ +L + D + A
Sbjct: 3 SATRRWLRRNRTPIAVGAGVIGAGYLVSRLRRRFEQNQEDCTFTVLALLPTATQNVLEAM 62
Query: 49 ERENDEIIKTQMKAHFESIQMIVDSTTLPHAMQFLSIR--ISEEIDVSH---VMDRLNQG 103
+ E Q+KA I D+T + +S S +
Sbjct: 63 DTEKITYEIQQLKARPAGPPSIADTTLTEDDGRSVSASGPASSALATESDPQPQAAEAAA 122
Query: 104 KGMLSPPEKLQLWDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSS 163
S K QLWD+L I S R L+ + +L++ R+Q+N+LGR Y+ + L +
Sbjct: 123 PANASRKTKRQLWDDLAISSIARAFTLLYVLALLTMLTRIQLNLLGRRSYLSSVITLATG 182
Query: 164 HLLEEVDLIDRDDE-------------QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGK 210
+ L + DD+ +++L+ + +L+ L ++ +
Sbjct: 183 SAQASIGLENNDDDSPDVVYGSDFDVNRRYLTFSWWLLNKGWAELRDRVEVAVRGAFGHL 242
Query: 211 QLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDS---------- 260
+D ++ + Q+ D + W+ +L+ P+D + S
Sbjct: 243 SPRDELSLDMFGRLTKQVRDEVEAD---VKWLAFLLPPRDQEDSVLAESGILGESETAAG 299
Query: 261 -----------SDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEMETQTEA 309
S +L+ ET +++ S F++++ L L+E Q+
Sbjct: 300 ADGSMIVVQSQSPVVPPPLRRLLDETSDIIDSPAFSHVLAKILDAGFSTLMEGELAQSVF 359
Query: 310 GGLATGKP---LAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYAN 361
G KP L KVL + + + + N++LQ + + E++ F ++Y++
Sbjct: 360 GSGGVPKPTVQLPKVLSCLTRQAHAV-GNGMPNKYLQAMETVRELEGFAAVVYSS 413
>gb|EDP51377.1| peroxisomal membrane protein (Pex3), putative [Aspergillus
fumigatus A1163]
Length = 528
Score = 333 bits (855), Expect = 1e-89, Method: Composition-based stats.
Identities = 79/464 (17%), Positives = 173/464 (37%), Gaps = 114/464 (24%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
R ++R++R+ + + AG +G+GYL + S + + +D I + ++
Sbjct: 5 TRRWFRRNRKGLAIGAGIIGAGYLAGQYVLSKITEARE-------QMSSDRIARENLRRR 57
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVM-----------DRLNQGKGMLS---- 108
FE Q T L + I E + V + RL G+G +S
Sbjct: 58 FEQNQTDCTYTVLALLPTA-AEGIVEALPVEELTKELQKKRAERLARLQAGEGTVSDLSS 116
Query: 109 ----------------------------------------PPEKLQLWDELKILSFTRMV 128
K QLW+E+KI S TR
Sbjct: 117 VSPSAADDDRRSLSSFQSDGFVRTSQVGESSFDGEGPARVKRNKTQLWNEVKITSVTRSF 176
Query: 129 LSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLL-EEVDLIDRDDE---------- 177
++++++L+++ R+Q+N+LGR Y+ + +L + + L D DD+
Sbjct: 177 TLIYTLSLLTIFTRIQLNLLGRRNYLSSVISLATPPANTSTIKLEDHDDDDLTQTLGNDF 236
Query: 178 ---QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFM- 233
+++L+ + +L+ L++++Q + + ++ I+ L E + I
Sbjct: 237 ETNRRYLAFSWWLLHRGWKDLMNEVQAAVTDAFGSLNPREDISVGRLSELTLDIRKKVEG 296
Query: 234 ---STGSPHHWVDYLMMPQ--------DTKLSRTTSDSSDEAVSKFHQLMVETREVLIST 282
W+ YL+ P+ ++ ++ T ++ ++ S L+ ET +++ S
Sbjct: 297 NTPEERRSRRWLPYLLPPREEEEHLLEESGVAGVTEPTTSQSASTLRHLLDETADLIESP 356
Query: 283 EFTNIVEISLKCFTDVLVEEMETQTEAGGL-----------------------ATGKPLA 319
F +++ D+L++ + LA
Sbjct: 357 TFGRVLQGLNDECFDLLMQNCIQEAFQSSPQASESVPQSFTSVATVVPQVKTADVKTKLA 416
Query: 320 KVLPQIEKTMNVI-TAEPSKNRFLQII-RDLPEVKLFFTLLYAN 361
VL + + +VI N +L + +++ ++ F ++Y++
Sbjct: 417 NVLAVMARQAHVIGNGTNPPNIYLSAMDQNVRNLEAFAAVIYSS 460
>ref|XP_754003.1| peroxisomal membrane protein (Pex3) [Aspergillus fumigatus Af293]
gb|EAL91965.1| peroxisomal membrane protein (Pex3), putative [Aspergillus
fumigatus Af293]
Length = 528
Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats.
Identities = 79/464 (17%), Positives = 173/464 (37%), Gaps = 114/464 (24%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
R ++R++R+ + + AG +G+GYL + S + + +D I + ++
Sbjct: 5 TRRWFRRNRKGLAIGAGIIGAGYLAGQYVLSKITEARE-------QMSSDRIARENLRRR 57
Query: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVM-----------DRLNQGKGMLS---- 108
FE Q T L + I E + V + RL G+G +S
Sbjct: 58 FEQNQTDCTYTVLALLPTA-AEGIVEALPVEELTKELQKKRAERLARLQAGEGTVSDLSS 116
Query: 109 ----------------------------------------PPEKLQLWDELKILSFTRMV 128
K QLW+E+KI S TR
Sbjct: 117 VSPSAADDDRRSLSSFQSDGFVRTSQVGESSFDSEGPARVKRNKTQLWNEVKITSVTRSF 176
Query: 129 LSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLL-EEVDLIDRDDE---------- 177
++++++L+++ R+Q+N+LGR Y+ + +L + + L D DD+
Sbjct: 177 TLIYTLSLLTIFTRIQLNLLGRRNYLSSVISLATPPANTSTIKLEDHDDDDLTQTLGNDF 236
Query: 178 ---QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFM- 233
+++L+ + +L+ L++++Q + + ++ I+ L E + I
Sbjct: 237 ETNRRYLAFSWWLLHRGWKDLMNEVQAAVTDAFGSLNPREDISVGRLSELTLDIRKKVEG 296
Query: 234 ---STGSPHHWVDYLMMPQ--------DTKLSRTTSDSSDEAVSKFHQLMVETREVLIST 282
W+ YL+ P+ ++ ++ T ++ ++ S L+ ET +++ S
Sbjct: 297 NTPEERRSRRWLPYLLPPREEEEHLLEESGVAGVTEPTTSQSASTLRHLLDETADLIESP 356
Query: 283 EFTNIVEISLKCFTDVLVEEMETQTEAGGL-----------------------ATGKPLA 319
F +++ D+L++ + LA
Sbjct: 357 TFGRVLQGLNDECFDLLMQNCIQEAFQSSPQASESVPQSFTSVATVVPQVKTADVKTKLA 416
Query: 320 KVLPQIEKTMNVI-TAEPSKNRFLQII-RDLPEVKLFFTLLYAN 361
VL + + +VI N +L + +++ ++ F ++Y++
Sbjct: 417 NVLAVMARQAHVIGNGTNPPNIYLSAMDQNVRNLEAFAAVIYSS 460
>ref|XP_001805510.1| hypothetical protein SNOG_15360 [Phaeosphaeria nodorum SN15]
gb|EAT77293.1| hypothetical protein SNOG_15360 [Phaeosphaeria nodorum SN15]
Length = 516
Score = 331 bits (849), Expect = 6e-89, Method: Composition-based stats.
Identities = 80/466 (17%), Positives = 165/466 (35%), Gaps = 104/466 (22%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADL--ERELAHERENDEIIKT 58
+ R + R++R + AG LG+GY+ + E +A E +
Sbjct: 2 IQSTRQWLRRNRTNFAIGAGVLGAGYMAGQYVLGKLSEARQRMGEDRIAKENLRRRFEQN 61
Query: 59 QMKAHFESIQMIVDST-----------TLPHAMQFLSIRISEEIDVSHVM---------- 97
Q F + ++ +T L + + R+S + S +
Sbjct: 62 QEDCTFTVLAILPTATENILEAIPVEQVLEELQRQKAERLSRSVGPSEIGTSAPPSVADT 121
Query: 98 ------------------------------------DRLNQGKGMLSPPEKLQLWDELKI 121
N K QLW+E+KI
Sbjct: 122 TEDDGKSSIQTDGYVHASQVAIEGAGEGEGEGSPVPAEANPAPSEEKKKSKAQLWNEMKI 181
Query: 122 LSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEE---VDLIDRDDE- 177
S TR ++++++L+L R+Q+N+LGR Y+ + +L + + E ++L + DD+
Sbjct: 182 GSITRAFTLIYTLSLLTLLTRIQLNLLGRRNYLASVVSLAAPQSMTEGSRINLENNDDDN 241
Query: 178 ------------QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETV 225
+++LS + +L+ LI ++ + ++V ++ IT L E
Sbjct: 242 FEQAYGNDFETNRRYLSLSWWLLHKGCIHLIDKVRVAVKDVFGSLNPREEITLERLSELT 301
Query: 226 MQIVDVFMSTGSPH----HWVDYLMMPQDTKLSRTTSDS--------SDEAVSKFHQLMV 273
+++ W+ +L+ PQD + S + +L+
Sbjct: 302 LEVRKRVEGATEEERRTCKWLSFLLPPQDQEDYVLRESGMTSSSESTSPTTTTSLRRLID 361
Query: 274 ETREVLISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKV------------ 321
ET +++ S FT+++ + L LV+ +Q + A+V
Sbjct: 362 ETSDLIDSPSFTHVLTLLLDAGFSHLVDNKISQLSYKIPPVSESTARVQEIVGGDVKAKV 421
Query: 322 ---LPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLY-ANMP 363
L + + I + N +L I + +++ F ++Y +N
Sbjct: 422 ANSLAVFCRQAHSIGSGA-NNEYLAAIEQVRDLEAFAAVVYSSNFE 466
>ref|XP_001635320.1| predicted protein [Nematostella vectensis]
gb|EDO43257.1| predicted protein [Nematostella vectensis]
Length = 380
Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats.
Identities = 82/388 (21%), Positives = 169/388 (43%), Gaps = 40/388 (10%)
Query: 2 DFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMK 61
+ ++GF+R+H+RK +V + Y++ + +E + I + + +
Sbjct: 3 ESIKGFFRRHKRKFVVGGIVITGIYIVSRYARWRLDEWR-------ANQELEYIAQARKQ 55
Query: 62 AHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELKI 121
HFES Q T L + L + ++++ + +L + P KL+LW+ LK
Sbjct: 56 HHFESNQRTCSVT-LYSLIPSLRDSLLDKLNTEEITAKLREK-----PANKLELWESLKT 109
Query: 122 LSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKFL 181
LSF R V +++S ML +++RVQ+N++G ++Y+D+ + + ++K+L
Sbjct: 110 LSFARTVTAVYSSCMLFVFLRVQLNVIGGYMYLDSLVTPVEGGSNGKRKHVAEGMQKKYL 169
Query: 182 SSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTG----- 236
+ +L++ + + ++ S E++L LKD +T LQ + I F +
Sbjct: 170 ALVKYLLSEGLDKMTDTIKRSTEDILSDISLKDKLTHAELQRLINHIRQTFEFSQQTSSS 229
Query: 237 -----------SPHHWVDYLMMPQDTKLSRTTSDSSDEAV--SKFHQLMVETREVLISTE 283
S M+P+D +++ V +F +L+ ET +VL S +
Sbjct: 230 MRSSQTGSTPLSSTRPFCQFMVPEDMAALDGRGETAVGGVEGEEFMRLVEETLDVLESED 289
Query: 284 FTNIVEISLKCFTDVLVEEMETQTEAGG--------LATGKPLAKVLPQIEKTMNVITAE 335
+ +++ L ++ + +A LA PLAK++P + + + ++
Sbjct: 290 CSAVLQGCLDVAFAHILGNIAPFFQAEELGMSFKYLLAVSLPLAKIIPIVNGQIYHMFSD 349
Query: 336 PSKNRFLQIIRDLPEVKLFFTLLYANMP 363
S N +LQ + + F +Y
Sbjct: 350 -SDNSYLQDLFKVRFAGEFAANVYEAFS 376
>gb|EAZ08561.1| hypothetical protein OsI_029793 [Oryza sativa (indica
cultivar-group)]
gb|EAZ44208.1| hypothetical protein OsJ_027691 [Oryza sativa (japonica
cultivar-group)]
Length = 376
Score = 327 bits (839), Expect = 8e-88, Method: Composition-based stats.
Identities = 163/377 (43%), Positives = 234/377 (62%), Gaps = 19/377 (5%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ RGFW +HRRK+LV+ G G+GY Y+ +SH R+L +E+ ER +EIIK Q+
Sbjct: 2 LASARGFWGRHRRKILVSLGVAGAGYAAYRYLDSHRRQLVRVEQRALEERAAEEIIKNQL 61
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLS-----PPEKLQL 115
+ HFE++Q I D+TTLP AM +L RI EE+D+SH+ ++L GKG S P EK
Sbjct: 62 QTHFENVQKISDTTTLPFAMHYLRSRIMEELDISHLTEKLMHGKGESSAPALTPKEKYDT 121
Query: 116 WDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRD 175
W+++KILSFTR V S+W++T+LSLY+RVQV ILGRHLY+D AR + L E D +
Sbjct: 122 WEKIKILSFTRTVSSIWAMTLLSLYVRVQVTILGRHLYLDFARVTDGAQLQEGSDTFSKS 181
Query: 176 DEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST 235
+ FL++AD+L T + +LI+ MQ +A E+LK KQLKD + + ET++QI+ FM
Sbjct: 182 GHKDFLATADYLATYGINALITKMQHAATEILKEKQLKDPMGIDEVLETILQILKQFMGL 241
Query: 236 GSPHHWVDYLMMPQDTKLSRTTSDSSD---------EAVSKFHQLMVETREVLISTEFTN 286
+ W++Y ++P++ + S + V K QLM ETR VL N
Sbjct: 242 CEDNSWINY-LVPENANVYAQLMAVSSSGFDDSSLLKDVRKLDQLMSETRIVL----SRN 296
Query: 287 IVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIR 346
I++ SLK V+VE++ Q A G PLAK+L ++ + + EP KN+ +QIIR
Sbjct: 297 IMDRSLKKIASVVVEDLAVQIGAPIPPPGLPLAKLLAKVAQLSLPLLEEPDKNKHIQIIR 356
Query: 347 DLPEVKLFFTLLYANMP 363
+PEV+LF+T LYANMP
Sbjct: 357 SMPEVELFYTFLYANMP 373
>ref|XP_962987.1| hypothetical protein NCU06175 [Neurospora crassa OR74A]
gb|EAA33751.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 623
Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 78/522 (14%), Positives = 178/522 (34%), Gaps = 166/522 (31%)
Query: 3 FVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADL--ERELAHERENDEIIKTQM 60
R +++++R + + AG +G+GY+ + + + +A E + Q
Sbjct: 4 STRQWFKRNRTPLAIGAGVVGAGYVATQYVLTKLTNARERMSSDRIAKENLRRRFEQNQE 63
Query: 61 KAHFESIQMIVDSTTLPHAMQFLS-IRISEEID------------------VSHVMDRLN 101
F + ++ +TT + ++ L+ RI+ EI +S V +
Sbjct: 64 DCTFTVLALLPTATT--NILEALNTERITYEIQQMKSPANRKKSISSLAPTISEVGTMDD 121
Query: 102 QGKGMLS------------------------------------------PPEKLQLWDEL 119
G+ M+S K QLWD+L
Sbjct: 122 DGRSMMSGFSVQSDGGAYPSFLAPGPLPSVAEGESAGGHVPQQEPPKKSRKTKRQLWDDL 181
Query: 120 KILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLI------- 172
KI S TR ++++ +L++ R+Q+N+LGR Y+ + +L + E +
Sbjct: 182 KISSITRSFTLIYTLGLLTMLTRIQLNLLGRRSYLSSVVSLATGSTREGAIALENNDDDG 241
Query: 173 -----------DRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVL 221
D + +K+L+ + +L+ ++ ++ + +V +D IT
Sbjct: 242 DLDGEGQAYGSDFEVNRKYLTFSWWLLNRGWVDVMQRVESAVRQVFGPLSPRDTITFDAF 301
Query: 222 QETVMQIVDVFMST---------GSPHHWVDYLMMPQDTK-------------------- 252
+ ++ + + G+ W+ +L+ PQ+ +
Sbjct: 302 SKLTREVRTIIEGSPAGQAGGAAGATTQWLPFLLPPQNMENFVLRESGILLEDDDSQQLS 361
Query: 253 --LSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVE--------- 301
S T + E+ +L+ ET +++ S F++++ L VL++
Sbjct: 362 SPPSATPGEGGGESTISLRRLLDETADLIESPAFSSVLSQLLDEGFAVLLDRKLTVGAFE 421
Query: 302 ------------------------------------EMETQTEAGGLATGKP------LA 319
++ + +P L
Sbjct: 422 AHAPPPAAVPPAVTLTPEAAAADDVVTSTTLVATSADLHHNATRQSIDMERPVTRAVLLP 481
Query: 320 KVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYAN 361
K+L + + + I N +LQ + + +++ F ++Y++
Sbjct: 482 KILSILTRQAHAI-GNGMPNEYLQAMEGVRDLEGFAAVVYSS 522
>ref|XP_001172297.1| PREDICTED: similar to Pex3 protein isoform 1 [Pan troglodytes]
Length = 329
Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats.
Identities = 79/384 (20%), Positives = 164/384 (42%), Gaps = 84/384 (21%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ V F ++H++K + LG +
Sbjct: 2 LRSVWNFLKRHKKKCIFLGTVLGVLSM--------------------------------- 28
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGMLSPPEKLQLWDELK 120
LP + L +++ E + + +R P KL++W++LK
Sbjct: 29 ---------------LPTLREALMQQLNSESLTALLKNR---------PSNKLEIWEDLK 64
Query: 121 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 180
I+SFTR +++++S ML + +RVQ+NI+G ++Y+D A + L D +Q++
Sbjct: 65 IISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNG----TTILAPPDVQQQY 120
Query: 181 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST----- 235
LSS L+ + + LI+ ++ + +++L LK ++ L++ + +I ++
Sbjct: 121 LSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW 180
Query: 236 ----GSPHHWVDYLMMPQDTKLSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEIS 291
GS Y+M ++T L+ S ++ +L+ ETR++L S +F+ ++
Sbjct: 181 INKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-KLLNETRDMLESPDFSTVLNTC 239
Query: 292 LKCFTDVLVEEM-------ETQTEAGG-----LATGKPLAKVLPQIEKTMNVITAEPSKN 339
L L++ M E + G + PLAK++P + ++ + +E + +
Sbjct: 240 LNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIHSVCSE-TPS 298
Query: 340 RFLQIIRDLPEVKLFFTLLYANMP 363
F+Q + + +VK F +Y
Sbjct: 299 HFVQDLLTMEQVKDFAANVYEAFS 322
>ref|XP_001753372.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ81595.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 399
Score = 326 bits (836), Expect = 2e-87, Method: Composition-based stats.
Identities = 124/381 (32%), Positives = 203/381 (53%), Gaps = 26/381 (6%)
Query: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYN-----SHTRRLADLERELAHERENDEIIKT 58
++ + +K+RR +L+ AG +G G +Y S +R+ D R ++E +E +
Sbjct: 13 LKAWVKKYRRSLLIAAGLVGGGTAIYYGVQYLGLDSQSRKERDAARVALVQKEAEERAEV 72
Query: 59 QMKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGK---GMLSPPEKLQL 115
Q+++HFE IQ I DSTTLP + L + ++D+ + D+L K +LS +K+QL
Sbjct: 73 QLQSHFEGIQRISDSTTLPSVLPHLKASLYSKVDLEGLTDKLMLCKVDPQLLSHRDKMQL 132
Query: 116 WDELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRD 175
W ELK SF R V ++ +V++L L+IR+Q+NILGR +Y DTAR + +S + +
Sbjct: 133 WQELKTRSFARTVCAMTAVSLLDLFIRIQLNILGRRVYFDTARNMMNSE--DSHVPLSMS 190
Query: 176 DEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMST 235
+ KF++ A +L + +L++D E VL+GKQLK+ T L++ M+I S
Sbjct: 191 VQHKFIAFAGYLHHKGLATLVADTYKVVEIVLRGKQLKEPYTIDELRDVFMKIRASLDSR 250
Query: 236 GSPHHWVDYLMMPQDTKLSR------------TTSDSSDEAVSKFHQLMVETREVLISTE 283
SP WV Y++ P++ + SD + E QLM ETR V+ S E
Sbjct: 251 RSP--WVQYVLPPENVLPDEFVATSSAADAAASVSDMTHEDDV-LAQLMNETRAVVSSDE 307
Query: 284 FTNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQ 343
F ++ + L D ++EE+ T G PLA++LP + + + P +NRF+
Sbjct: 308 FNEVLAVCLDAILDGVMEELYT-IYRGSPDNSIPLARMLPPVAGAGSTLLEHPDENRFIS 366
Query: 344 IIRDLPEVKLFFTLLYANMPQ 364
I+ +LP+V F L+Y N +
Sbjct: 367 ILANLPQVHAFCALVYTNSSE 387
>gb|EEH36161.1| peroxin 3 [Paracoccidioides brasiliensis Pb01]
Length = 540
Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 80/471 (16%), Positives = 158/471 (33%), Gaps = 118/471 (25%)
Query: 1 MDFVRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQM 60
+ R ++R+HR + + G +G GYL + S + ++ I + +
Sbjct: 2 ISATRRWFRRHRNGLAIGVGVIGVGYLAGQFVLSKITEARER-------MSSERIARENL 54
Query: 61 KAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGM-------------- 106
+ FE Q T L + I E + V + + L Q K
Sbjct: 55 RRRFEQNQTDCTFTILALLPTA-TENILEALPVEELTNELQQKKAERLAKLKPGEATGSE 113
Query: 107 ---------------------------------------LSPPEKLQLWDELKILSFTRM 127
P + QLW++LKI S TR
Sbjct: 114 ISSHSPSTAEDDVRSLSSFPSEGYVHASQVGESASGTNSPKPKGRTQLWNDLKINSLTRS 173
Query: 128 VLSLWSVTMLSLYIRVQVNILGRHLY-VDTARALGSSHLLEEVDLIDRDDE--------- 177
+ ++++++L+L R+Q+N+LGR Y S ++L D DD+
Sbjct: 174 LTLIYTLSLLTLLTRIQLNLLGRRNYLSSVVSLASSPQDQSTINLEDHDDDGIGHAFGND 233
Query: 178 ----QKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVF- 232
+++L+ + +L+ L+ ++ S E+V ++ +T L E + +
Sbjct: 234 FETNRRYLTFSWWLLHRGWQQLMDKVKESVEDVFGPVNPREDMTQEKLSELTLAVRKKVE 293
Query: 233 ---MSTGSPHHWVDYLMMPQDTKLSRTTSDS--------SDEAVSKFHQLMVETREVLIS 281
W+ YL+ +D + S + S L+ ET +++ S
Sbjct: 294 GATEEERRLTPWLPYLLPSRDQEDYVLKESGVLSASETSSSQNSSSLRHLLDETSDIIES 353
Query: 282 TEFTNIVEISLKCFTDVLVEEMETQTEAGGLATGKP------------------------ 317
+F+ I+ + L++ P
Sbjct: 354 PQFSQILTLLNNEAFSTLIDTKCAVEAFKSNPPQDPRSDEQLQQVFSSSSTLHPSPSPPL 413
Query: 318 -----LAKVLPQIEKTMNVI-TAEPSKNRFLQIIRD-LPEVKLFFTLLYAN 361
LA +L I + +VI N +L + + E++ F ++Y++
Sbjct: 414 PSKAKLATILAVIARQAHVIGNGNDPPNEYLATMEQGVRELEAFAAVVYSS 464
>ref|XP_001769437.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ65806.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 322 bits (825), Expect = 4e-86, Method: Composition-based stats.
Identities = 130/380 (34%), Positives = 205/380 (53%), Gaps = 25/380 (6%)
Query: 5 RGFWRKHRRKVLVTAGCLGSG----YLLYKLYN-SHTRRLADLERELAHERENDEIIKTQ 59
+ + +KH+R +LV AG +G G Y L+ L S R+ D R RE +E + Q
Sbjct: 14 KAWVKKHQRSLLVAAGLVGGGSAVYYGLHYLGLTSQARKERDAARAALLHREAEERAEAQ 73
Query: 60 MKAHFESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGK---GMLSPPEKLQLW 116
+++HFESIQ I D+TTLP + L + ++D+S + ++L GK LS +K+QLW
Sbjct: 74 LQSHFESIQRISDTTTLPSVLPQLKASLFSKVDLSGLTEKLILGKDDPQALSQRDKMQLW 133
Query: 117 DELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDD 176
ELK LSFTR V ++ ++++L L+IR+Q+NILGR +Y DTAR + L +
Sbjct: 134 QELKTLSFTRTVCAMSALSLLDLFIRIQLNILGRRVYFDTARDFMNPEDLHA--PLSMSV 191
Query: 177 EQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTG 236
+ KF++ A +L + +L+ D+ +AE L+GKQLK+ T L+ ++I+ S
Sbjct: 192 QHKFIAFAGYLHHKGLAALVGDIYKAAEIELRGKQLKESFTLYDLKNVFVRILATLDSKR 251
Query: 237 SPHHWVDYLMMPQDTKLSRT---------TSDSSDEAVS---KFHQLMVETREVLISTEF 284
WV Y++ P + ++ +D A S QLM ETR VL S EF
Sbjct: 252 PA--WVQYVLPPDNVLPEDLAGASSAADASNQFADVATSDNEVLDQLMNETRAVLASNEF 309
Query: 285 TNIVEISLKCFTDVLVEEMETQTEAGGLATGKPLAKVLPQIEKTMNVITAEPSKNRFLQI 344
+ + L+ D ++EE+ T G +G PLAK+LP + + + P +NRF++I
Sbjct: 310 HEVQAVCLEVMLDGVMEELYT-IYRGSSDSGIPLAKLLPPVAGAGSTLLEHPDENRFIRI 368
Query: 345 IRDLPEVKLFFTLLYANMPQ 364
+ LP+V F L+Y N +
Sbjct: 369 LASLPQVHAFCALVYTNSSE 388
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 23, 2008 5:56 PM
Number of letters in database: 883,778,997
Number of sequences in database: 2,617,685
Database: /host/Blast/data/nr_perl/nr.01
Posted date: May 23, 2008 5:54 PM
Number of letters in database: 976,759,346
Number of sequences in database: 2,761,413
Database: /host/Blast/data/nr_perl/nr.02
Posted date: May 23, 2008 5:48 PM
Number of letters in database: 374,670,760
Number of sequences in database: 1,165,270
Database: /host/Blast/data/nr_perl/nr.03
Posted date: Apr 28, 2009 5:40 PM
Number of letters in database: 114,943,120
Number of sequences in database: 354,819
Lambda K H
0.313 0.170 0.446
Lambda K H
0.267 0.0521 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,367,098,584
Number of Sequences: 6899187
Number of extensions: 239766515
Number of successful extensions: 912522
Number of sequences better than 10.0: 300
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 355
Number of HSP's that attempted gapping in prelim test: 910011
Number of HSP's gapped (non-prelim): 1363
length of query: 364
length of database: 2,350,152,223
effective HSP length: 135
effective length of query: 229
effective length of database: 1,418,761,978
effective search space: 324896492962
effective search space used: 324896492962
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 80 (35.1 bits)