BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= AT1G79810__[Arabidopsis_thaliana]
(333 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,899,187 sequences; 2,350,152,223 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565222.1| TED3 (REVERSAL OF THE DET PHENOTYPE); prot... 655 0.0
gb|AAM61388.1| putative RING finger protein [Arabidopsis th... 652 0.0
gb|AAF68113.1|AC010793_8 F20B17.23 [Arabidopsis thaliana] 619 e-175
ref|NP_974183.1| TED3 (REVERSAL OF THE DET PHENOTYPE); prot... 560 e-158
emb|CAO45868.1| unnamed protein product [Vitis vinifera] 506 e-141
ref|NP_001055075.1| Os05g0275700 [Oryza sativa (japonica cu... 476 e-132
gb|EAZ33629.1| hypothetical protein OsJ_017112 [Oryza sativ... 360 7e-98
ref|XP_001781834.1| predicted protein [Physcomitrella paten... 353 1e-95
gb|EAY97345.1| hypothetical protein OsI_018578 [Oryza sativ... 343 1e-92
gb|ACF22776.1| ring finger protein [Brachypodium distachyon] 331 4e-89
gb|ACO64229.1| predicted protein [Micromonas sp. RCC299] 202 3e-50
ref|XP_645304.1| RING Zn finger-containing protein [Dictyos... 199 3e-49
ref|XP_001421023.1| predicted protein [Ostreococcus lucimar... 165 6e-39
ref|NP_001016841.1| peroxin 2 [Xenopus tropicalis] >gi|8927... 163 2e-38
dbj|BAE27238.1| unnamed protein product [Mus musculus] 160 1e-37
gb|EDL05216.1| peroxisomal membrane protein 3, isoform CRA_... 159 4e-37
ref|XP_001377812.1| PREDICTED: similar to Peroxisome assemb... 159 4e-37
ref|NP_033020.2| peroxin 2 [Mus musculus] >gi|2623264|gb|AA... 158 5e-37
ref|XP_001490672.1| PREDICTED: similar to Peroxisome assemb... 157 7e-37
ref|NP_001093818.1| peroxin 2 [Bos taurus] >gi|151554728|gb... 157 8e-37
emb|CAL56641.1| putative peroxisome assembly protein 2 (ISS... 156 2e-36
ref|NP_001008454.1| peroxin 2 [Gallus gallus] >gi|53127700|... 155 4e-36
ref|XP_684073.1| PREDICTED: similar to Peroxisome assembly ... 153 2e-35
ref|XP_544136.2| PREDICTED: similar to Peroxisome assembly ... 152 3e-35
sp|P24392|PEX2_RAT Peroxisome assembly factor 1 (PAF-1) (Pe... 152 5e-35
ref|NP_058930.1| peroxin 2 [Rattus norvegicus] >gi|1109648|... 151 7e-35
gb|AAH00661.1| Peroxisomal membrane protein 3, 35kDa (Zellw... 150 9e-35
gb|ABZ92521.1| peroxisomal membrane protein 3, 35kDa (Zellw... 150 1e-34
ref|NP_000309.1| peroxin 2 [Homo sapiens] >gi|121114290|ref... 150 1e-34
sp|P55098|PEX2_MOUSE Peroxisome assembly factor 1 (PAF-1) (... 149 3e-34
gb|EAW87052.1| peroxisomal membrane protein 3, 35kDa (Zellw... 146 2e-33
sp|Q06438|PEX2_CRIGR Peroxisome assembly factor 1 (PAF-1) (... 144 7e-33
ref|XP_519817.2| PREDICTED: peroxisomal membrane protein 3 ... 138 5e-31
gb|EEH57229.1| predicted protein [Micromonas pusilla CCMP1545] 138 6e-31
ref|XP_001837282.1| hypothetical protein CC1G_00418 [Coprin... 135 3e-30
ref|XP_001202188.1| PREDICTED: similar to peroxisomal membr... 134 1e-29
ref|XP_001220945.1| hypothetical protein CHGG_01724 [Chaeto... 134 1e-29
ref|XP_504845.1| YlPEX2 [Yarrowia lipolytica] >gi|54041949|... 134 1e-29
ref|XP_001912471.1| unnamed protein product [Podospora anse... 132 2e-29
ref|XP_964597.1| peroxisomal biogenesis factor 2 [Neurospor... 132 3e-29
gb|EEH34726.1| peroxisomal biogenesis factor 2 [Paracoccidi... 130 1e-28
ref|XP_661660.1| hypothetical protein AN4056.2 [Aspergillus... 129 4e-28
ref|XP_001013694.1| Pex2 / Pex12 amino terminal region fami... 128 7e-28
gb|AAC49423.1| Pay5p 127 1e-27
gb|EEH42793.1| peroxisomal biogenesis factor 2 [Paracoccidi... 125 3e-27
ref|XP_001265299.1| peroxisome biosynthesis protein (Peroxi... 125 6e-27
ref|XP_001398873.1| hypothetical protein An18g04150 [Asperg... 124 7e-27
ref|XP_001212277.1| peroxisomal biogenesis factor 2 [Asperg... 124 9e-27
ref|XP_001269799.1| peroxisome biosynthesis protein (Peroxi... 123 3e-26
ref|XP_001816880.1| hypothetical protein [Aspergillus oryza... 122 3e-26
emb|CAF97942.1| unnamed protein product [Tetraodon nigrovir... 122 3e-26
ref|XP_001540740.1| peroxisomal biogenesis factor 2 [Ajello... 122 4e-26
ref|XP_750106.1| peroxisome biosynthesis protein (Peroxin-2... 121 7e-26
ref|XP_380900.1| hypothetical protein FG00724.1 [Gibberella... 120 1e-25
gb|ABH11413.1| peroxin 2 [Penicillium chrysogenum] 120 1e-25
ref|XP_368589.1| hypothetical protein MGG_00655 [Magnaporth... 118 7e-25
gb|EDU43666.1| peroxisomal biogenesis factor 2 [Pyrenophora... 117 1e-24
ref|XP_820860.1| peroxin-2, putative [Trypanosoma cruzi str... 114 1e-23
ref|XP_001593335.1| hypothetical protein SS1G_06257 [Sclero... 113 3e-23
ref|XP_001559557.1| hypothetical protein BC1G_01713 [Botryo... 110 1e-22
ref|XP_001650927.1| peroxisomal membrane protein, putative ... 108 5e-22
ref|XP_001354095.1| GA20087-PA [Drosophila pseudoobscura] >... 108 6e-22
ref|XP_843828.1| peroxin-2 [Trypanosoma brucei] >gi|6236026... 104 1e-20
emb|CAC59701.1| peroxin-2 [Trypanosoma brucei] 104 1e-20
gb|AAL29060.2| LD46714p [Drosophila melanogaster] 103 1e-20
ref|XP_001732474.1| hypothetical protein MGL_0249 [Malassez... 103 2e-20
ref|XP_566502.1| peroxisome assembly protein [Cryptococcus ... 103 3e-20
ref|XP_778153.1| hypothetical protein CNBA1530 [Cryptococcu... 103 3e-20
ref|NP_648210.1| CG7081 CG7081-PA [Drosophila melanogaster]... 102 3e-20
ref|XP_001565685.1| glycosome import protein [Leishmania br... 101 9e-20
ref|XP_756472.1| hypothetical protein UM00325.1 [Ustilago m... 101 1e-19
ref|XP_001683984.1| glycosome import protein (gim1) [Leishm... 100 1e-19
ref|XP_001483143.1| hypothetical protein PGUG_05098 [Pichia... 100 1e-19
ref|XP_001089931.1| PREDICTED: similar to Peroxisome assemb... 100 1e-19
ref|XP_001605507.1| PREDICTED: similar to peroxisomal membr... 100 2e-19
ref|XP_001790759.1| hypothetical protein SNOG_00062 [Phaeos... 99 3e-19
ref|XP_001846716.1| peroxisome assembly factor 1 [Culex pip... 99 5e-19
ref|XP_457905.1| hypothetical protein DEHA0C05720g [Debaryo... 99 6e-19
ref|XP_001625262.1| predicted protein [Nematostella vectens... 98 8e-19
ref|XP_309872.4| AGAP010836-PA [Anopheles gambiae str. PEST... 97 2e-18
ref|XP_001466263.1| glycosome import protein (gim1) [Leishm... 97 2e-18
ref|XP_714968.1| peroxisomal import RING finger complex com... 97 3e-18
gb|AAB48828.1| Gim1 [Leishmania donovani] 96 3e-18
ref|XP_001387892.2| peroxisome assembly protein (Peroxin-2)... 96 4e-18
ref|XP_001876750.1| predicted protein [Laccaria bicolor S23... 91 1e-16
gb|AAT97412.1| peroxin 2 [Pichia angusta] 87 3e-15
ref|XP_001245152.1| hypothetical protein CIMG_04593 [Coccid... 86 4e-15
ref|XP_001193457.1| PREDICTED: similar to Peroxisomal membr... 86 6e-15
ref|XP_001528114.1| conserved hypothetical protein [Loddero... 84 2e-14
gb|AAQ04625.1|AF443186_1 peroxisome protein Pex2 [Paracocci... 80 3e-13
ref|NP_502201.2| PeRoXisome assembly factor family member (... 79 7e-13
ref|XP_001670253.1| Hypothetical protein CBG06104 [Caenorha... 76 4e-12
gb|ABQ22826.1| peroxisome assembly factor 1-like protein [C... 75 1e-11
sp|Q01964|PEX2_PICPA Peroxisomal biogenesis factor 2 (Perox... 74 2e-11
ref|XP_001691622.1| predicted protein [Chlamydomonas reinha... 72 7e-11
ref|XP_001519317.1| PREDICTED: similar to peroxisomal membr... 58 1e-06
ref|XP_447524.1| hypothetical protein CAGL0I06292g [Candida... 49 6e-04
ref|XP_001426637.1| hypothetical protein GSPATT00029870001 ... 47 0.002
ref|XP_001426969.1| hypothetical protein GSPATT00030205001 ... 47 0.002
ref|XP_001912286.1| unnamed protein product [Podospora anse... 46 0.004
ref|NP_012325.1| RING-finger peroxin, peroxisomal membrane ... 46 0.005
ref|XP_001646918.1| hypothetical protein Kpol_2000p24 [Vand... 46 0.005
ref|XP_686852.2| PREDICTED: hypothetical protein [Danio rerio] 45 0.009
ref|XP_001346686.1| PREDICTED: hypothetical protein, partia... 45 0.010
ref|XP_001704766.1| Zinc finger domain [Giardia lamblia ATC... 43 0.026
ref|NP_001035457.1| hypothetical protein LOC678620 [Danio r... 43 0.028
ref|NP_001003581.1| hypothetical protein LOC445187 [Danio r... 43 0.029
ref|XP_001379096.1| PREDICTED: similar to RING finger prote... 43 0.039
dbj|BAC35202.1| unnamed protein product [Mus musculus] 43 0.044
ref|XP_001231271.1| PREDICTED: similar to RING finger prote... 42 0.047
gb|ACO14578.1| RING finger protein 146 [Caligus clemensi] 42 0.048
dbj|BAB12125.1| hypothetical protein [Macaca fascicularis] 42 0.050
emb|CAC43019.1| RING finger protein 29 [Homo sapiens] 42 0.050
ref|XP_519791.2| PREDICTED: ring finger protein 29 isoform ... 42 0.050
ref|NP_908974.1| ring finger protein 29 isoform 3 [Homo sap... 42 0.052
ref|XP_418278.2| PREDICTED: similar to RING finger protein ... 42 0.053
ref|XP_001160624.1| PREDICTED: ring finger protein 29 isofo... 42 0.058
emb|CAC43020.1| RING finger protein 29 [Homo sapiens] 42 0.058
ref|XP_001100542.1| PREDICTED: similar to ring finger prote... 42 0.058
ref|XP_001160681.1| PREDICTED: ring finger protein 29 isofo... 42 0.058
emb|CAD24432.1| RING finger protein 29 [Homo sapiens] 42 0.059
ref|NP_149047.2| ring finger protein 29 isoform 2 [Homo sap... 42 0.059
ref|NP_908973.1| ring finger protein 29 isoform 1 [Homo sap... 42 0.059
ref|XP_858714.1| PREDICTED: similar to ring finger protein ... 42 0.059
ref|XP_858630.1| PREDICTED: similar to ring finger protein ... 42 0.061
ref|XP_001310832.1| hypothetical protein TVAG_059670 [Trich... 42 0.061
ref|XP_001494962.1| PREDICTED: similar to heterogeneous nuc... 42 0.061
gb|AAI12760.1| Tripartite motif-containing 55 [Bos taurus] 42 0.062
ref|NP_001012218.1| tripartite motif-containing 55 [Rattus ... 42 0.063
ref|NP_908975.1| ring finger protein 29 isoform 4 [Homo sap... 42 0.063
ref|NP_001074750.1| tripartite motif-containing 55 [Mus mus... 42 0.063
tpd|FAA00154.1| TPA: zinc finger protein [Ciona intestinalis] 42 0.066
ref|XP_544105.2| PREDICTED: similar to ring finger protein ... 42 0.069
ref|NP_982853.1| ABL094Wp [Ashbya gossypii ATCC 10895] >gi|... 42 0.073
ref|NP_001091169.1| hypothetical protein LOC100036929 [Xeno... 42 0.073
ref|XP_001494942.1| PREDICTED: similar to heterogeneous nuc... 42 0.075
ref|NP_067422.1| tripartite motif-containing 54 [Mus muscul... 42 0.082
emb|CAC32839.1| ring finger protein 29 [Homo sapiens] >gi|3... 42 0.084
gb|AAP36945.1| Homo sapiens ring finger protein 29 [synthet... 42 0.084
ref|XP_001494919.1| PREDICTED: similar to heterogeneous nuc... 42 0.087
ref|XP_001684412.1| hypothetical protein, conserved [Leishm... 42 0.090
ref|NP_001013235.1| tripartite motif-containing 54 [Rattus ... 42 0.091
gb|EDL37337.1| tripartite motif-containing 54 [Mus musculus] 42 0.094
ref|XP_001511947.1| PREDICTED: similar to RING finger prote... 42 0.096
emb|CAC32840.1| ring finger protein 29 [Homo sapiens] 42 0.097
gb|AAD20699.1| hypothetical protein [Arabidopsis thaliana] ... 42 0.097
gb|AAI07260.1| Trim54 protein [Mus musculus] 41 0.099
emb|CAF91694.1| unnamed protein product [Tetraodon nigrovir... 41 0.10
sp|Q02084|A33_PLEWA Zinc-binding protein A33 >gi|113413605|... 41 0.11
gb|AAI07259.1| Trim54 protein [Mus musculus] 41 0.11
gb|AAD20418.1| unknown protein [Arabidopsis thaliana] 41 0.12
ref|XP_001092313.1| PREDICTED: similar to ring finger prote... 41 0.12
sp|Q5REJ9|TRI54_PONPY Tripartite motif-containing protein 5... 41 0.12
ref|NP_001091177.1| hypothetical protein LOC100036938 [Xeno... 41 0.12
ref|XP_001380423.1| PREDICTED: similar to RING-finger prote... 41 0.13
ref|NP_045280.1| ubiquitin E3 ligase ICP0 [Equid herpesviru... 41 0.13
ref|NP_001017951.1| tripartite motif-containing 54 [Bos tau... 41 0.13
sp|Q9BYV2|TRI54_HUMAN Tripartite motif-containing protein 5... 41 0.14
ref|XP_532908.2| PREDICTED: similar to tripartite motif-con... 41 0.14
ref|NP_912730.2| ring finger protein 30 isoform 2 [Homo sap... 41 0.14
ref|NP_001085095.1| hypothetical protein LOC432166 [Xenopus... 41 0.14
ref|NP_850020.1| zinc finger (C3HC4-type RING finger) famil... 41 0.15
ref|NP_115935.3| ring finger protein 30 isoform 1 [Homo sap... 41 0.15
ref|XP_001500979.1| PREDICTED: similar to ring finger prote... 41 0.15
emb|CAC32841.1| ring finger protein 30 [Homo sapiens] 41 0.15
ref|XP_001338903.1| PREDICTED: hypothetical protein [Danio ... 41 0.16
ref|XP_686669.1| PREDICTED: hypothetical protein [Danio rerio] 41 0.16
ref|NP_001038490.1| hypothetical protein LOC563772 [Danio r... 41 0.17
gb|AAY24296.1| unknown [Homo sapiens] 41 0.17
emb|CAC32842.1| ring finger protein 30 [Homo sapiens] 40 0.17
ref|XP_001513735.1| PREDICTED: similar to candidate tumor s... 40 0.17
ref|XP_001337075.1| PREDICTED: hypothetical protein [Danio ... 40 0.18
gb|AAI34093.1| Si:dkey-221h15.2 protein [Danio rerio] 40 0.18
ref|XP_001380151.1| PREDICTED: hypothetical protein [Monode... 40 0.19
gb|AAB63316.1| contains a deletion of 399 base pairs as com... 40 0.19
ref|NP_001007388.1| hypothetical protein LOC492515 [Danio r... 40 0.19
pdb|1CHC|A Chain A, Structure Of The C3hc4 Domain By 1h-Nuc... 40 0.22
dbj|BAD91098.1| transcriptional activator [Equid herpesviru... 40 0.24
dbj|BAD27395.1| transactivator protein [Equid herpesvirus 1] 40 0.25
ref|YP_053107.1| ubiquitin E3 ligase ICP0 [Equid herpesviru... 40 0.25
dbj|BAD91096.1| transcriptional activator [Equid herpesviru... 40 0.25
dbj|BAD91106.1| transcriptional activator [Equid herpesviru... 40 0.25
ref|XP_001369492.1| PREDICTED: similar to muscle ring finge... 40 0.26
ref|XP_001508387.1| PREDICTED: hypothetical protein [Ornith... 40 0.26
dbj|BAD91102.1| transcriptional activator [Equid herpesviru... 40 0.27
dbj|BAD91104.1| transcriptional activator [Equid herpesviru... 40 0.27
ref|XP_001268381.1| SWI/SNF family DNA-dependent ATPase Ris... 40 0.29
ref|XP_001516261.1| PREDICTED: similar to Tripartite motif-... 40 0.31
ref|XP_001366851.1| PREDICTED: similar to TNF receptor-asso... 40 0.32
ref|XP_001453079.1| hypothetical protein GSPATT00019400001 ... 40 0.32
ref|XP_001366797.1| PREDICTED: similar to TNF receptor-asso... 40 0.32
ref|XP_623395.1| PREDICTED: similar to ring finger protein ... 40 0.37
ref|XP_381744.1| hypothetical protein FG01568.1 [Gibberella... 40 0.37
dbj|BAD14903.1| peroxisomal membrane protein 3 [Gallus gallus] 40 0.37
ref|XP_001470171.1| hypothetical protein [Leishmania infant... 39 0.43
ref|NP_001039760.1| tripartite motif-containing 63 [Bos tau... 39 0.44
ref|XP_001450350.1| hypothetical protein GSPATT00017310001 ... 39 0.44
ref|XP_001562632.1| hypothetical protein LbrM09_V2.0160 [Le... 39 0.45
ref|NP_001086683.1| ring finger protein 30 [Xenopus laevis]... 39 0.48
ref|XP_319022.3| AGAP009902-PA [Anopheles gambiae str. PEST... 39 0.50
emb|CAF93916.1| unnamed protein product [Tetraodon nigrovir... 39 0.51
ref|XP_001665998.1| hypothetical protein CBG06802 [Caenorha... 39 0.52
ref|NP_001072557.1| tripartite motif-containing 63 [Xenopus... 39 0.52
emb|CAF93116.1| unnamed protein product [Tetraodon nigrovir... 39 0.55
ref|XP_544488.2| PREDICTED: similar to muscle specific ring... 39 0.55
ref|XP_001703545.1| RING finger protein [Chlamydomonas rein... 39 0.57
ref|NP_499028.1| NHL (ring finger b-box coiled coil) domain... 39 0.59
ref|XP_001211638.1| conserved hypothetical protein [Aspergi... 39 0.61
ref|NP_001092824.1| hypothetical protein LOC425772 [Gallus ... 39 0.63
ref|ZP_00374273.1| ZNRF3 protein [Wolbachia endosymbiont of... 39 0.64
dbj|BAB85025.1| unnamed protein product [Homo sapiens] 39 0.66
ref|XP_700683.2| PREDICTED: hypothetical protein [Danio rerio] 39 0.67
ref|NP_001035071.1| hypothetical protein LOC664753 [Danio r... 39 0.70
gb|ACA64749.1| tripartite motif protein 7.2 [Meleagris gall... 39 0.72
gb|AAL13880.1| LD35285p [Drosophila melanogaster] 39 0.75
gb|EAW61852.1| SH3 domain containing ring finger 2, isoform... 39 0.75
ref|XP_001507986.1| PREDICTED: similar to Tripartite motif-... 39 0.76
ref|NP_647989.2| CG10542 CG10542-PA [Drosophila melanogaste... 39 0.76
ref|NP_001002133.1| hypothetical protein LOC415223 [Danio r... 39 0.77
gb|AAN71372.1| RE34950p [Drosophila melanogaster] 39 0.77
gb|EAY95380.1| hypothetical protein OsI_016613 [Oryza sativ... 39 0.77
gb|AAI25108.1| SH3 domain containing ring finger 2 [Homo sa... 39 0.79
emb|CAH67983.1| OSIGBa0142I02-OSIGBa0101B20.26 [Oryza sativ... 39 0.79
ref|NP_689763.2| SH3 domain containing ring finger 2 [Homo ... 39 0.80
ref|XP_001099248.1| PREDICTED: similar to SH3 domain contai... 39 0.80
gb|EAW61854.1| SH3 domain containing ring finger 2, isoform... 39 0.81
ref|XP_001353127.1| GA10386-PA [Drosophila pseudoobscura] >... 39 0.82
ref|XP_001566171.1| hypothetical protein LbrM28_V2.1400 [Le... 39 0.82
ref|XP_001749861.1| predicted protein [Monosiga brevicollis... 39 0.83
gb|EDM06646.1| similar to tripartite motif-containing 65 (p... 38 0.84
ref|XP_221125.3| PREDICTED: similar to tripartite motif-con... 38 0.86
emb|CAE04137.2| OSJNBa0009P12.31 [Oryza sativa (japonica cu... 38 0.87
ref|XP_001099558.1| PREDICTED: similar to SH3 domain contai... 38 0.87
ref|XP_560812.1| AGAP012677-PA [Anopheles gambiae str. PEST... 38 0.89
ref|XP_001650655.1| hypothetical protein AaeL_AAEL000730 [A... 38 0.93
ref|XP_001015605.2| IBR domain containing protein [Tetrahym... 38 0.97
ref|NP_543179.1| tripartite motif-containing 63 [Rattus nor... 38 1.00
sp|Q38HM4|TRI63_MOUSE E3 ubiquitin-protein ligase TRIM63 (T... 38 1.0
ref|XP_001108306.1| PREDICTED: similar to muscle specific r... 38 1.0
ref|NP_001053725.1| Os04g0594000 [Oryza sativa (japonica cu... 38 1.0
ref|XP_001500989.1| PREDICTED: similar to Tripartite motif-... 38 1.0
ref|XP_308493.4| AGAP007335-PA [Anopheles gambiae str. PEST... 38 1.0
ref|XP_001844449.1| conserved hypothetical protein [Culex p... 38 1.1
gb|EDL30017.1| mCG12943, isoform CRA_a [Mus musculus] 38 1.1
ref|NP_001034137.2| tripartite motif-containing 63 [Mus mus... 38 1.1
ref|XP_001010127.2| zinc finger protein, putative [Tetrahym... 38 1.1
emb|CAC33173.1| ring finger protein 28 [Homo sapiens] 38 1.1
gb|AAP36037.1| ring finger protein 28 [Homo sapiens] >gi|61... 38 1.1
gb|EAW61853.1| SH3 domain containing ring finger 2, isoform... 38 1.1
ref|NP_115977.2| muscle specific ring finger protein 1 [Hom... 38 1.2
ref|XP_524625.1| PREDICTED: muscle specific ring finger pro... 38 1.2
ref|XP_424369.2| PREDICTED: similar to ring finger protein ... 38 1.2
emb|CAM21949.1| tripartite motif-containing 63 [Mus musculu... 38 1.2
ref|XP_001375710.1| PREDICTED: similar to RING finger prote... 38 1.2
emb|CAG14116.1| unnamed protein product [Tetraodon nigrovir... 38 1.2
emb|CAF93064.1| unnamed protein product [Tetraodon nigrovir... 38 1.2
gb|AAP36890.1| Homo sapiens ring finger protein 28 [synthet... 38 1.2
ref|XP_917879.1| PREDICTED: similar to tripartite motif-con... 38 1.2
ref|XP_999135.1| PREDICTED: similar to tripartite motif-con... 38 1.3
ref|NP_001085119.1| hypothetical protein LOC432194 [Xenopus... 38 1.3
ref|NP_176889.1| zinc finger (C3HC4-type RING finger) famil... 38 1.4
ref|XP_001623434.1| predicted protein [Nematostella vectens... 38 1.4
ref|NP_649596.1| CG10981 CG10981-PA, isoform A [Drosophila ... 37 1.4
gb|AAH72332.1| LOC432253 protein [Xenopus laevis] 37 1.4
ref|NP_035410.1| tripartite motif-containing 10 [Mus muscul... 37 1.4
ref|XP_308529.3| inhibitor of apoptosis protein (AGAP007291... 37 1.4
ref|NP_957389.1| hypothetical protein LOC394070 [Danio reri... 37 1.5
ref|XP_001560603.1| predicted protein [Botryotinia fuckelia... 37 1.5
gb|EEH55255.1| predicted protein [Micromonas pusilla CCMP1545] 37 1.5
ref|NP_731017.1| CG10981 CG10981-PB, isoform B [Drosophila ... 37 1.5
gb|ACO68600.1| E3 ubiquitin-protein ligase COP1 [Micromonas... 37 1.5
ref|NP_001085170.1| hypothetical protein LOC432253 [Xenopus... 37 1.5
ref|NP_001038646.1| similar to Tripartite motif protein 25 ... 37 1.5
ref|XP_687012.2| PREDICTED: hypothetical protein [Danio rerio] 37 1.5
ref|XP_692867.2| PREDICTED: similar to midline 1 [Danio rerio] 37 1.5
gb|EDL30018.1| mCG12943, isoform CRA_b [Mus musculus] 37 1.5
ref|XP_447681.1| hypothetical protein CAGL0I09988g [Candida... 37 1.6
sp|Q9WUH5|TRI10_MOUSE Tripartite motif-containing protein 1... 37 1.6
gb|AAH51632.1| Tripartite motif protein 10 [Mus musculus] 37 1.6
gb|AAH97790.1| LOC432253 protein [Xenopus laevis] 37 1.6
ref|XP_782164.1| PREDICTED: hypothetical protein [Strongylo... 37 1.7
ref|XP_001453882.1| hypothetical protein GSPATT00020168001 ... 37 1.7
gb|AAK52497.1|AF361946_1 RING zinc finger protein SMRZ [Hom... 37 1.7
ref|XP_001462284.1| hypothetical protein GSPATT00027238001 ... 37 1.8
ref|XP_845098.1| hypothetical protein, conserved [Trypanoso... 37 1.9
ref|XP_001436642.1| hypothetical protein GSPATT00037684001 ... 37 1.9
emb|CAO22349.1| unnamed protein product [Vitis vinifera] 37 1.9
ref|XP_001224804.1| hypothetical protein CHGG_07148 [Chaeto... 37 1.9
emb|CAG10995.1| unnamed protein product [Tetraodon nigrovir... 37 1.9
ref|XP_503872.1| hypothetical protein [Yarrowia lipolytica]... 37 2.0
ref|XP_001488179.1| PREDICTED: similar to putative transcri... 37 2.0
ref|XP_001699887.1| hypothetical protein CHLREDRAFT_182126 ... 37 2.0
ref|NP_956148.1| ring finger protein 146 [Danio rerio] >gi|... 37 2.0
ref|XP_001640836.1| predicted protein [Nematostella vectens... 37 2.1
gb|EAW89336.1| tripartite motif-containing 65, isoform CRA_... 37 2.1
ref|XP_702143.2| PREDICTED: hypothetical protein [Danio rerio] 37 2.1
ref|XP_001332854.1| PREDICTED: hypothetical protein [Danio ... 37 2.2
ref|XP_001092841.1| PREDICTED: similar to midline 1 isoform... 37 2.2
gb|AAK77846.1|AF369029_177 ORF177, gene family 9 [shrimp wh... 37 2.2
ref|NP_477925.1| wsv403 [Shrimp white spot syndrome virus] ... 37 2.2
>ref|NP_565222.1| TED3 (REVERSAL OF THE DET PHENOTYPE); protein binding / zinc ion
binding [Arabidopsis thaliana]
sp|Q9CA86|PEX2_ARATH Peroxisome assembly protein 2 (Peroxin-2) (AthPEX2) (Pex2p)
gb|AAG52254.1|AC011717_22 putative RING finger protein; 84236-82024 [Arabidopsis thaliana]
gb|AAL36419.1| unknown protein [Arabidopsis thaliana]
gb|AAM20014.1| unknown protein [Arabidopsis thaliana]
Length = 333
Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats.
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL
Sbjct: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
Query: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG
Sbjct: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
Query: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR
Sbjct: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
Query: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS
Sbjct: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
Query: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY 300
EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY
Sbjct: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY 300
Query: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
>gb|AAM61388.1| putative RING finger protein [Arabidopsis thaliana]
Length = 333
Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats.
Identities = 332/333 (99%), Positives = 332/333 (99%)
Query: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL
Sbjct: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
Query: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG
Sbjct: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
Query: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR
Sbjct: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
Query: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS
Sbjct: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
Query: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY 300
EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIP IALPCQHRYCYY
Sbjct: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPXIALPCQHRYCYY 300
Query: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
>gb|AAF68113.1|AC010793_8 F20B17.23 [Arabidopsis thaliana]
Length = 389
Score = 619 bits (1595), Expect = e-175, Method: Composition-based stats.
Identities = 330/392 (84%), Positives = 330/392 (84%), Gaps = 62/392 (15%)
Query: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL
Sbjct: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
Query: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG
Sbjct: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
Query: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
K GLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR
Sbjct: 121 K---GLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 177
Query: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS
Sbjct: 178 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 237
Query: 241 -------------------------------------------EMLLLLLPLLNSSAVKN 257
EMLLLLLPLLNSSAVKN
Sbjct: 238 VGLLYPSIDQNILFRLATRNVMLGSDFLVLFWHSALNLFGDIQEMLLLLLPLLNSSAVKN 297
Query: 258 ILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQH----------------RYCYYC 301
ILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQH RYCYYC
Sbjct: 298 ILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHSMCCSCYIHLKELTCRRYCYYC 357
Query: 302 IRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
IRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 358 IRTRCASAASFRCLRCNEPVVAIQREGVSSGK 389
>ref|NP_974183.1| TED3 (REVERSAL OF THE DET PHENOTYPE); protein binding / zinc ion
binding [Arabidopsis thaliana]
Length = 282
Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats.
Identities = 282/282 (100%), Positives = 282/282 (100%)
Query: 52 MSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDE 111
MSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDE
Sbjct: 1 MSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDE 60
Query: 112 RGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLA 171
RGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLA
Sbjct: 61 RGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLA 120
Query: 172 RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMN 231
RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMN
Sbjct: 121 RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMN 180
Query: 232 RQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIAL 291
RQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIAL
Sbjct: 181 RQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIAL 240
Query: 292 PCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
PCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 241 PCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 282
>emb|CAO45868.1| unnamed protein product [Vitis vinifera]
Length = 346
Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats.
Identities = 248/319 (77%), Positives = 288/319 (90%), Gaps = 2/319 (0%)
Query: 8 DDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLM 67
+DAW+ +YQRL P+ QS S++S IPV+ISRVNQ DAARLD+E+SAMLKEQLVKVF+LM
Sbjct: 18 EDAWVHTYQRLQPQWQSFSLSQQSTIPVSISRVNQVDAARLDIEISAMLKEQLVKVFSLM 77
Query: 68 KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLE 127
KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGN LMNLRYRDER + + GKVRTGLE
Sbjct: 78 KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNGLMNLRYRDERTMELR--GKVRTGLE 135
Query: 128 GPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKA 187
GPGLT QKIWYCVA+VGGQY+++RLQSFSAFRRWGDSEQR +ARR W ++QRIEG+YKA
Sbjct: 136 GPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRSVARRAWIMIQRIEGLYKA 195
Query: 188 ASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLL 247
ASF NLL FL+TGRYRNLIE+AL+ARLVY SP+MNR+VSFEYMNRQLVWNEFSEMLLLLL
Sbjct: 196 ASFSNLLIFLFTGRYRNLIERALQARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLL 255
Query: 248 PLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCA 307
PLLNSS+++N L PF+K+KSSS++ D CPICQ P IPF+ALPC+HRYCYYC+RTRCA
Sbjct: 256 PLLNSSSIRNFLRPFSKNKSSSSEGDETACPICQASPTIPFLALPCEHRYCYYCLRTRCA 315
Query: 308 SAASFRCLRCNEPVVAIQR 326
+A+SFRC+RC+EPVVA+QR
Sbjct: 316 AASSFRCIRCSEPVVAMQR 334
>ref|NP_001055075.1| Os05g0275700 [Oryza sativa (japonica cultivar-group)]
gb|AAT85132.1| putative peroxisome assembly protein 2 [Oryza sativa (japonica
cultivar-group)]
dbj|BAF16989.1| Os05g0275700 [Oryza sativa (japonica cultivar-group)]
Length = 342
Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats.
Identities = 240/323 (74%), Positives = 277/323 (85%), Gaps = 3/323 (0%)
Query: 9 DAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK 68
DAW Y+RLLP+ +S+ S + IP++ISRVNQFDAARLDVEMSAMLKEQLVKVF+L+K
Sbjct: 22 DAWAAEYRRLLPQWESMRDSSKIAIPISISRVNQFDAARLDVEMSAMLKEQLVKVFSLVK 81
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGK-VRTGLE 127
PG+LFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDER A GK VRTGLE
Sbjct: 82 PGLLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERA--APITGKEVRTGLE 139
Query: 128 GPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKA 187
GPGL+ QK+ YC+++VGGQY++SRLQSFSAFRRWGDSEQRPLARR W LVQ EG+Y+A
Sbjct: 140 GPGLSVSQKVLYCISTVGGQYIWSRLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRA 199
Query: 188 ASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLL 247
+SF NLL FLY RY+ ++E+ LKARLVY SP+MNR+VSFEYMNRQLVWNEFSEMLLLLL
Sbjct: 200 SSFFNLLLFLYGARYKTIVERILKARLVYESPNMNRAVSFEYMNRQLVWNEFSEMLLLLL 259
Query: 248 PLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCA 307
PLLNSS+VK L PF+KDKS+S+ D CPIC+ P+IPF ALPCQHRYCYYC++TRCA
Sbjct: 260 PLLNSSSVKKFLLPFSKDKSASSSGDEADCPICRSSPSIPFEALPCQHRYCYYCLQTRCA 319
Query: 308 SAASFRCLRCNEPVVAIQREGVS 330
+ S+RC RCNE VVAIQR+G S
Sbjct: 320 ATNSYRCARCNEIVVAIQRQGSS 342
>gb|EAZ33629.1| hypothetical protein OsJ_017112 [Oryza sativa (japonica
cultivar-group)]
Length = 252
Score = 360 bits (925), Expect = 7e-98, Method: Composition-based stats.
Identities = 177/233 (75%), Positives = 203/233 (87%), Gaps = 3/233 (1%)
Query: 9 DAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK 68
DAW Y+RLLP+ +S+ S + IP++ISRVNQFDAARLDVEMSAMLKEQLVKVF+L+K
Sbjct: 22 DAWAAEYRRLLPQWESMRDSSKIAIPISISRVNQFDAARLDVEMSAMLKEQLVKVFSLVK 81
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGK-VRTGLE 127
PG+LFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDER A GK VRTGLE
Sbjct: 82 PGLLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERA--APITGKEVRTGLE 139
Query: 128 GPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKA 187
GPGL+ QK+ YC+++VGGQY++SRLQSFSAFRRWGDSEQRPLARR W LVQ EG+Y+A
Sbjct: 140 GPGLSVSQKVLYCISTVGGQYIWSRLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRA 199
Query: 188 ASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
+SF NLL FLY RY+ ++E+ LKARLVY SP+MNR+VSFEYMNRQLVWNEFS
Sbjct: 200 SSFFNLLLFLYGARYKTIVERILKARLVYESPNMNRAVSFEYMNRQLVWNEFS 252
>ref|XP_001781834.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ53388.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 356
Score = 353 bits (905), Expect = 1e-95, Method: Composition-based stats.
Identities = 188/329 (57%), Positives = 246/329 (74%), Gaps = 7/329 (2%)
Query: 9 DAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK 68
DAW+++++ + P+ + + A ++V V I RVNQ DAARLDVEM+ MLKEQL +VF+L +
Sbjct: 18 DAWLQAWRAIAPQWEQIRAKVKTVPDVPILRVNQIDAARLDVEMTGMLKEQLSRVFSLSQ 77
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGV-VAQHLGK-VRTGL 126
PG+L +YEPEL+AFLEFL+WRFSIWVDKPTPGNALMNLRYR+ER GK VRTGL
Sbjct: 78 PGLLLRYEPELNAFLEFLVWRFSIWVDKPTPGNALMNLRYRNERSFNTYLKFGKAVRTGL 137
Query: 127 EGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYK 186
EG GLT QKI YC+ VGG+Y ++RLQ SAF+RWGD ++ ARR W L+Q+ E +YK
Sbjct: 138 EGAGLTKTQKILYCLLVVGGRYAWARLQLISAFQRWGDRQRTSWARRAWLLLQKAESLYK 197
Query: 187 AASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLL 246
A F NL+ FL++GRY + +E+ L ARLVY P MNR+VSFEYMNRQLVW+EFSE+LLL+
Sbjct: 198 IAGFANLVLFLHSGRYPSTVERLLGARLVYEKPDMNRAVSFEYMNRQLVWHEFSELLLLI 257
Query: 247 LPLLNSSAVKNILS-PFA-KDKSSSTKEDTVTCPICQVDPAI-PFIALPCQHRYCYYCIR 303
LPLLN +++ +L PF+ + +SS ED CPIC+ P + P++ALPC H YCYYC+R
Sbjct: 258 LPLLNMMSIRKVLMFPFSTQAPASSLPED--ACPICEACPIVTPYMALPCCHLYCYYCLR 315
Query: 304 TRCASAASFRCLRCNEPVVAIQREGVSSG 332
TR S + +C RC+ VVA++R V +G
Sbjct: 316 TRSLSDRNLKCSRCSVSVVALKRYQVEAG 344
>gb|EAY97345.1| hypothetical protein OsI_018578 [Oryza sativa (indica
cultivar-group)]
Length = 259
Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats.
Identities = 167/209 (79%), Positives = 188/209 (89%), Gaps = 3/209 (1%)
Query: 33 IPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSI 92
IP++ISRVNQFDAARLDVEMSAMLKEQLVKVF+L+KPG+LFQYEPELDAFLEFLIWRFSI
Sbjct: 53 IPISISRVNQFDAARLDVEMSAMLKEQLVKVFSLVKPGLLFQYEPELDAFLEFLIWRFSI 112
Query: 93 WVDKPTPGNALMNLRYRDERGVVAQHLGK-VRTGLEGPGLTSPQKIWYCVASVGGQYLFS 151
WVDKPTPGNALMNLRYRDER A GK VRTGLEGPGL+ QK+ YC+++VGGQY++S
Sbjct: 113 WVDKPTPGNALMNLRYRDERA--APITGKEVRTGLEGPGLSVSQKVLYCISTVGGQYIWS 170
Query: 152 RLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALK 211
RLQSFSAFRRWGDSEQRPLARR W LVQ EG+Y+A+SF NLL FLY RY+ ++E+ LK
Sbjct: 171 RLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRASSFFNLLLFLYGARYKTIVERILK 230
Query: 212 ARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
ARLVY SP+MNR+VSFEYMNRQLVWNEFS
Sbjct: 231 ARLVYESPNMNRAVSFEYMNRQLVWNEFS 259
>gb|ACF22776.1| ring finger protein [Brachypodium distachyon]
Length = 281
Score = 331 bits (849), Expect = 4e-89, Method: Composition-based stats.
Identities = 178/241 (73%), Positives = 200/241 (82%), Gaps = 19/241 (7%)
Query: 31 SVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRF 90
++IP++ISRVNQFDAARLDVEMSAMLKEQLVKVF+LMKPG+LFQYEPELDAFLEFLIWRF
Sbjct: 58 TMIPISISRVNQFDAARLDVEMSAMLKEQLVKVFSLMKPGLLFQYEPELDAFLEFLIWRF 117
Query: 91 SIWVDKPTPGNALMNLRYRDERGVVAQHLGK-VRTGLEGPGLTSPQKIWYCVASVGGQYL 149
SIWVDKPTPGNALMNLRYRDER A GK VRTGLEGPGL+ QKI YC+++VGGQYL
Sbjct: 118 SIWVDKPTPGNALMNLRYRDERA--APIAGKEVRTGLEGPGLSVSQKILYCISTVGGQYL 175
Query: 150 FSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKA 209
SRLQSFSAFRRWGDSEQRPLARR W LVQ EG+Y+A SF NLL FLY GRY+ ++E+
Sbjct: 176 LSRLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRAVSFFNLLLFLYGGRYKTIVERI 235
Query: 210 LKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSS 269
LKARLVY SP+MNR +EMLLLLLPLLNSS+VK L PF+KDKS+S
Sbjct: 236 LKARLVYGSPNMNR----------------AEMLLLLLPLLNSSSVKKFLLPFSKDKSAS 279
Query: 270 T 270
+
Sbjct: 280 S 280
>gb|ACO64229.1| predicted protein [Micromonas sp. RCC299]
Length = 357
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 117/323 (36%), Positives = 171/323 (52%), Gaps = 25/323 (7%)
Query: 35 VAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWV 94
V + RV Q DA RLD E+ ++L+EQ +VF ++ PG + + + EL L+ L++ F++W
Sbjct: 33 VRVLRVAQVDAGRLDDELVSLLREQFNRVFAMVFPGAVTRRQSELTLLLDALVFYFTVWS 92
Query: 95 DKPTPGNALMNLRYRDER-------GVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQ 147
+PTPG LMNLRYRDER + RTG+EG L+ Q++ Y A VGG+
Sbjct: 93 HRPTPGMELMNLRYRDERPSSSSSGSSSSSQRSTGRTGMEGAKLSVSQRLLYGTAFVGGR 152
Query: 148 YLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIE 207
+ +S+L+ RW D + R + V +E Y A + +NLL+FL GRYR L E
Sbjct: 153 FAWSKLRRAIGAGRWADEPEGSWRRVASSAVSALEATYSALALVNLLAFLNRGRYRTLTE 212
Query: 208 KALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILS-PFAKDK 266
+AL+ RLVY PH R VS+EY+NRQLVW E SE+ L +LP++++ ++ S F
Sbjct: 213 RALRTRLVYGEPHARRMVSYEYLNRQLVWREVSELALFVLPMVSAPGLRRAASRAFGVGP 272
Query: 267 SSSTKEDTVT--------------CPICQVDPA-IPFIALPCQHRYCYYCIRTRCASAAS 311
C C +PA + + PC H +CYYC +R +
Sbjct: 273 GGDGPGGGRLGGAEGGAEGCRGGPCVECGGEPAGARYASTPCGHAFCYYCAASRAGTRGD 332
Query: 312 --FRCLRCNEPVVAIQREGVSSG 332
+ C RC EPV I++ G
Sbjct: 333 RGYTCPRCREPVRGIRQVRAEGG 355
>ref|XP_645304.1| RING Zn finger-containing protein [Dictyostelium discoideum AX4]
gb|AAS45382.1| similar to Rattus norvegicus (Rat). Peroxisome assembly factor-1
(PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3)
[Dictyostelium discoideum]
gb|EAL71269.1| RING Zn finger-containing protein [Dictyostelium discoideum AX4]
Length = 423
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 106/318 (33%), Positives = 168/318 (52%), Gaps = 33/318 (10%)
Query: 36 AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVD 95
+I RV+Q D+ARLD E+ +L+ Q +K+FT KP + ++PE++ L+ +I++ SI+
Sbjct: 107 SIVRVSQLDSARLDEEILDLLRSQFMKIFTFFKPNFIHNFQPEINLVLKSVIYKLSIFNL 166
Query: 96 KPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQS 155
T GN L NL YR+E+ +R + LT QK + ++GG++L++R+
Sbjct: 167 GTTYGNQLQNLTYRNEKA-----FDPIRGSDQLNKLTMRQKWLSGLINIGGEWLWTRINR 221
Query: 156 FSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLV 215
+ W + + ++ W + E YKA + LN L+FL+ G+Y L+ + L RLV
Sbjct: 222 YLINNNWSEHPPNDIRKKFWNFLNFAESAYKALALLNFLTFLFNGKYVTLVNRILHMRLV 281
Query: 216 YRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDT- 274
Y P ++R++SFEYMNR LVW+ F+E +L ++PL+N +K+ L S
Sbjct: 282 YAHPTLSRNISFEYMNRLLVWHGFTEFILFIMPLINIDRIKSFLYRLLVKTSFGNSSGNN 341
Query: 275 -------------------------VTCPICQVDP-AIPFIALPCQHRYCYYCIRTRCAS 308
CPIC DP ++P+ A C H +CYYCI+T C
Sbjct: 342 NNTASNPLQQLQKQQLLIQQQQMALAKCPICMNDPISMPYSA-DCGHLFCYYCIKTSCMI 400
Query: 309 AASFRCLRCNEPVVAIQR 326
+SF C RCN + I+R
Sbjct: 401 DSSFTCPRCNSLISNIKR 418
>ref|XP_001421023.1| predicted protein [Ostreococcus lucimarinus CCE9901]
ref|XP_001422873.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gb|ABO99316.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gb|ABP01232.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 284
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 97/255 (38%), Positives = 140/255 (54%), Gaps = 8/255 (3%)
Query: 78 ELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKI 137
E+ L+ ++ + V++PTPG LMNLR RDERG ++TG+EGPGL+ Q+I
Sbjct: 26 EMRLLLDCAMFACTTGVNRPTPGMELMNLRLRDERGDHGAATTTMKTGVEGPGLSIAQRI 85
Query: 138 WYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLAR-----RLWTLVQRIEGIYKAASFLN 192
Y +A+ Y + Q R+ + ++ R W L Q +E Y A+F+N
Sbjct: 86 AYGLATCVVGYGWGLWQRKMLRERYDEDDEDDEGGGGWKYRAWKLSQTVENCYTMANFVN 145
Query: 193 LLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNS 252
FL GRY L+E+AL+ARLVY+ P M R V FEY+N+QL W E SE++L LP L S
Sbjct: 146 FCVFLRNGRYPTLLERALRARLVYQRPTMARVVDFEYLNQQLAWRELSELVLFTLPYLYS 205
Query: 253 SAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCA-SAAS 311
+ V++ L + V C C+ +P PF+A PC H YCYYC+R R S
Sbjct: 206 TRVRSTLGALTSRVVAVQAYRCVACG-CR-EPIHPFVAEPCGHPYCYYCLRARLVEQPTS 263
Query: 312 FRCLRCNEPVVAIQR 326
C++C + V ++R
Sbjct: 264 CACVKCGKRVAEMRR 278
>ref|NP_001016841.1| peroxin 2 [Xenopus tropicalis]
emb|CAJ82611.1| peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Xenopus
tropicalis]
gb|AAI21554.1| Peroxisomal membrane protein 3 [Xenopus tropicalis]
Length = 306
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 94/297 (31%), Positives = 152/297 (51%), Gaps = 26/297 (8%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q F KPG+L ++EPE+ AFL +WR++I+
Sbjct: 14 VLRISQLDAIELNKALEQLIWSQFNSCFQGFKPGLLTRFEPEIKAFLCLFLWRYTIYTKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G A++N++Y+++ + L QK+W+ + VGG++L R SF
Sbjct: 74 ATVGQAILNMQYKNDLEATKNY----------RPLNKQQKVWFALFMVGGKWLEER--SF 121
Query: 157 SAFRR--WGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARL 214
F +G S QR + I G+ K + LN L FL G++ L E+ L R
Sbjct: 122 DLFSNHPFGASFQRTK-----YFLNAISGLLKFGALLNFLIFLQQGKFATLTERLLGIRS 176
Query: 215 VYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDT 274
V+ P R V FEYMNR+++W+ F+E L+ LLPL+N+ +K+ L + K + D
Sbjct: 177 VFSRPQDVRQVGFEYMNREILWHGFAEFLIFLLPLINTQKLKSKLFSWCKPAKGHSLSDP 236
Query: 275 V------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
C +C PA+P + C H +CYYCI++ + F C +C+ V +Q
Sbjct: 237 SLAVICKECCLCGEWPAMPH-TIGCSHVFCYYCIKSNYMADMYFTCPKCSSQVHNLQ 292
>dbj|BAE27238.1| unnamed protein product [Mus musculus]
Length = 305
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 27/297 (9%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA LD + ++ Q + F KPG+L ++EPE+ AFL +WRF+I+
Sbjct: 14 VLRISQLDALELDKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G +++N++Y+++ + + +T QK+WY V ++GG++L R +
Sbjct: 74 ATVGQSVLNIQYKNDSSLNLIYQPPSKT----------QKLWYAVCTIGGKWLEER--CY 121
Query: 157 SAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARL 214
FR R LA + + + G+ K +N L FL G++ L E+ L
Sbjct: 122 DLFR------NRHLASFGKAKQFMNFLVGLLKLGELINFLIFLQKGKFATLTERLLGIHS 175
Query: 215 VYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDT 274
V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS + + + D+
Sbjct: 176 VFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCIPLTGAAGHDS 235
Query: 275 V------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
C +C P +P + C+H +CYYC+++ F C +C V ++Q
Sbjct: 236 TLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCPKCGTEVHSVQ 291
>gb|EDL05216.1| peroxisomal membrane protein 3, isoform CRA_b [Mus musculus]
Length = 307
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 89/297 (29%), Positives = 152/297 (51%), Gaps = 27/297 (9%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL +WRF+I+
Sbjct: 16 VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 75
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G +++N++Y+++ + + +T QK+WY V ++GG++L R +
Sbjct: 76 ATVGQSVLNIQYKNDSSLNLIYQPPSKT----------QKLWYAVCTIGGKWLEER--CY 123
Query: 157 SAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARL 214
FR R LA + + + G+ K +N L FL G++ L E+ L
Sbjct: 124 DLFR------NRHLASFGKAKQFMNFLVGLLKLGELINFLIFLQKGKFATLTERLLGIHS 177
Query: 215 VYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDT 274
V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS + + + D+
Sbjct: 178 VFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCIPLTGAAGHDS 237
Query: 275 V------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
C +C P +P + C+H +CYYC+++ F C +C V ++Q
Sbjct: 238 TLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCPKCGTEVHSVQ 293
>ref|XP_001377812.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Monodelphis domestica]
Length = 305
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 149/295 (50%), Gaps = 23/295 (7%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q F KPG+L + EPE+ AFL +WRF+I+
Sbjct: 14 VLRISQLDALELNKALEQLVWSQFTHCFHGFKPGLLARLEPEVKAFLWLFLWRFTIYSKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G ++MN++Y++ ++ L+ QK+WY + +VGG++L R +
Sbjct: 74 ATVGQSIMNIQYKNNYSQTQKY----------QPLSKNQKLWYAICTVGGRWLEER--CY 121
Query: 157 SAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVY 216
FR + ++ I G+ K +S +N L FL G++ L E+ L R V+
Sbjct: 122 DLFR----NHHLASFYKIKQCTNLIVGLLKLSSLVNFLIFLQKGKFATLTERLLGIRSVF 177
Query: 217 RSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILS----PFAKDKSSSTKE 272
P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS PF +S
Sbjct: 178 CKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCIPFTGVPNSDVTL 237
Query: 273 DT--VTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
T C +C P +P + C H +CYYC+++ F C +C V+ +Q
Sbjct: 238 ATHGKECSLCGEWPTMPH-TIGCVHVFCYYCVKSSYLFDMYFTCPKCGTEVLNLQ 291
>ref|NP_033020.2| peroxin 2 [Mus musculus]
gb|AAB91465.1| peroxisome membrane protein PEX2 [Mus musculus]
gb|AAH12404.1| Peroxisomal membrane protein 3 [Mus musculus]
dbj|BAE30130.1| unnamed protein product [Mus musculus]
dbj|BAE31130.1| unnamed protein product [Mus musculus]
gb|EDL05215.1| peroxisomal membrane protein 3, isoform CRA_a [Mus musculus]
Length = 305
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 89/297 (29%), Positives = 152/297 (51%), Gaps = 27/297 (9%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL +WRF+I+
Sbjct: 14 VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G +++N++Y+++ + + +T QK+WY V ++GG++L R +
Sbjct: 74 ATVGQSVLNIQYKNDSSLNLIYQPPSKT----------QKLWYAVCTIGGKWLEER--CY 121
Query: 157 SAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARL 214
FR R LA + + + G+ K +N L FL G++ L E+ L
Sbjct: 122 DLFR------NRHLASFGKAKQFMNFLVGLLKLGELINFLIFLQKGKFATLTERLLGIHS 175
Query: 215 VYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDT 274
V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS + + + D+
Sbjct: 176 VFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCIPLTGAAGHDS 235
Query: 275 V------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
C +C P +P + C+H +CYYC+++ F C +C V ++Q
Sbjct: 236 TLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCPKCGTEVHSVQ 291
>ref|XP_001490672.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Equus caballus]
Length = 305
Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 90/295 (30%), Positives = 151/295 (51%), Gaps = 23/295 (7%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL +WRF+I+
Sbjct: 14 VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G +++N++Y+++ ++ R QK+WY V ++GG++L R +
Sbjct: 74 ATVGQSVLNIQYKNDFSPNPRYQPPSRN----------QKLWYAVCTIGGKWLEER--CY 121
Query: 157 SAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVY 216
FR + R+ V + GI K +N L FL G++ L E+ L R V+
Sbjct: 122 DLFR----NPHLASFRKAKQCVNFVVGILKLGGLINFLIFLQRGKFATLTERLLGIRSVF 177
Query: 217 RSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPF------AKDKSSST 270
P R V FEYMNR+++W+ F+E L+ LLPL+N +K LS + A + S+
Sbjct: 178 CKPQNIREVGFEYMNREILWHGFAEFLIFLLPLINIQKLKAKLSSWCIPLTGAPNGDSTL 237
Query: 271 KEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
C +C P +P + C+H +CYYC+++ F C +C V ++Q
Sbjct: 238 ATSGRQCSLCGEWPTMPH-TIGCEHIFCYYCVKSSFLYDMYFTCPKCGTEVHSLQ 291
>ref|NP_001093818.1| peroxin 2 [Bos taurus]
gb|AAI48002.1| LOC512677 protein [Bos taurus]
Length = 305
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 90/297 (30%), Positives = 153/297 (51%), Gaps = 27/297 (9%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL +WRF+I+
Sbjct: 14 VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G +++N++Y+++ + L + QK+WY V ++GG++L R +
Sbjct: 74 ATVGQSVLNIQYQND----------LSPNLSYQPPSRNQKLWYAVCTIGGKWLEER--CY 121
Query: 157 SAFRRWGDSEQRPLA--RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARL 214
FR R +A R+ + + G+ K +N L FL G++ L E+ L
Sbjct: 122 DLFR------NRHIASFRKAKQCMNLVVGLLKLGGLINFLIFLQRGKFATLTERLLGIHS 175
Query: 215 VYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPF------AKDKSS 268
V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N ++ LS + A +S
Sbjct: 176 VFHKPQSVREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLRAKLSSWCVPLTGAPGSNS 235
Query: 269 STKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
+ C +C P +P + C+H +CYYC+++ SF C +C V ++Q
Sbjct: 236 TLATSGRQCSLCGEWPTMPH-TVGCEHVFCYYCVKSSFLFDMSFTCPKCGTEVHSLQ 291
>emb|CAL56641.1| putative peroxisome assembly protein 2 (ISS) [Ostreococcus tauri]
Length = 381
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 109/345 (31%), Positives = 160/345 (46%), Gaps = 48/345 (13%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLM----------------------KPGMLFQ 74
+ RV+Q DA RLD E+ +L +QLV+ + + F
Sbjct: 34 VLRVSQVDAKRLDEELLEILHDQLVRCVDALTLCATSACGSGDDVNDSMSSRRRARTTFA 93
Query: 75 YEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVV--AQHLGKVRTGLEGPGLT 132
FL+ + + + PTPG LMNLR+RDER + +TG+EG GLT
Sbjct: 94 SRERTKLFLDAATFACTTMRNAPTPGQELMNLRFRDERRAERDEEFRRTAKTGVEGDGLT 153
Query: 133 SPQKIWYCVASVGGQYLFSRLQSFSAFRRWG-----DSEQRPL-ARRLWTLVQRIEGIYK 186
Q++ Y G + ++ + A R+ D + R + +R W + E +
Sbjct: 154 VTQRLAYGAVKCAGAFAWNAWMAKMARERYDEAMDEDEDGRGVWKQRAWRWSRAAEDAHV 213
Query: 187 AASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLL 246
ASF+N FL GRY L+E+ L ARLVY P M R V FEY+N+QL W E SE++L
Sbjct: 214 VASFVNFCVFLRYGRYPTLLERFLGARLVYSRPSMARVVDFEYLNQQLAWRELSELVLFT 273
Query: 247 LPLLNSSAVKNILSPFAKDKS---SSTKEDTVT-------------CPICQ-VDPAIPFI 289
LP L +S V++ + F S S+T D C C +P PF+
Sbjct: 274 LPYLYNSRVRSFVGAFGSSTSGEASTTSADGGRAGGRGRVVVQAHRCVACGCAEPVHPFV 333
Query: 290 ALPCQHRYCYYCIRTR-CASAASFRCLRCNEPVVAIQREGVSSGK 333
A PC H YCYYC+R R C++C+ PV ++R ++ +
Sbjct: 334 ADPCGHPYCYYCLRARLLERPVDCPCVKCSRPVDRMRRLSLAPAR 378
>ref|NP_001008454.1| peroxin 2 [Gallus gallus]
emb|CAG31179.1| hypothetical protein [Gallus gallus]
Length = 304
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 99/310 (31%), Positives = 154/310 (49%), Gaps = 29/310 (9%)
Query: 24 SLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
S + + +SV PV R++Q DA L+ + ++ Q F KPG+L EPE+ AFL
Sbjct: 3 SSIGNEKSVNPVL--RISQLDALELNKALEQLVWSQFTSCFHGFKPGVLAHIEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
L+WRF+I+ T G A++N++Y++ ++ L+ QK+WY + +
Sbjct: 61 WLLLWRFTIYSKNATVGQAILNIQYKNNLSQTEKY----------QPLSKHQKLWYLIFT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
VGG++L R + R Q ++ + G+ K +N L FL G +
Sbjct: 111 VGGRWLEERCYDLFSNR------QLQSVSKIKHYINFGAGLLKLCGLVNFLIFLQKGTFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVK-NILS-- 260
L E+ L R V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K I S
Sbjct: 165 TLTERILGIRSVFCKPQSVRQVGFEYMNRELLWHGFAEFLIYLLPLINVQKLKLKICSWC 224
Query: 261 -PFAK----DKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCL 315
P A DK+ +T C +C P +P + C H +CYYCI++ F C
Sbjct: 225 FPIANLPNSDKTLATHYK--VCSLCGEWPTMPH-TIGCSHVFCYYCIKSNYLFDMYFTCP 281
Query: 316 RCNEPVVAIQ 325
+C V ++Q
Sbjct: 282 KCGSEVHSLQ 291
>ref|XP_684073.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Danio rerio]
ref|XP_001343742.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Danio rerio]
Length = 321
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 91/287 (31%), Positives = 156/287 (54%), Gaps = 22/287 (7%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA LD + ++ Q + F KPG+L EPEL A L+ L+WRF+I+ +
Sbjct: 30 VLRISQLDAFELDGALEQLVWSQFTQCFQHFKPGILTPVEPELKALLQLLLWRFTIYSNS 89
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G +L+N+RY++ + G + ++ PQK W+ + +VG ++ R +S
Sbjct: 90 ATVGQSLLNIRYKN----------ALIPGQKYRPMSRPQKFWFALLTVGEKWF--RERSH 137
Query: 157 SAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVY 216
S F AR++ ++ + G+ KAAS +N L FL G + L E+ L + V+
Sbjct: 138 SLFLNHPAESNARKARKVLSI---LLGLTKAASLVNFLLFLQRGTFPTLTERLLGVQPVF 194
Query: 217 RSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLN----SSAVKNILSPFAKDKSSSTKE 272
P R ++F+Y+NR+L+W+ F+E L+ LLPL+N + V + SP + + + E
Sbjct: 195 SRPQGPRDINFQYLNRELLWHGFAEFLIFLLPLINVWKLKAGVSALFSPLSDLTGTQSSE 254
Query: 273 DT--VTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+T C IC P +P ++ C+H +CYYC+++ + F C +C
Sbjct: 255 ETHLTECAICGEWPTMPH-SIGCKHVFCYYCVKSNVIADIYFTCPKC 300
>ref|XP_544136.2| PREDICTED: similar to Peroxisome assembly factor-1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Canis familiaris]
Length = 305
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 92/297 (30%), Positives = 151/297 (50%), Gaps = 27/297 (9%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q + F KPG+L +EPE+ A L +WRF+I+
Sbjct: 14 VLRISQLDALELNKALEQLVWAQFTQCFHGFKPGLLAHFEPEVKALLWLFLWRFTIYSKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G +++N++Y+++ K+R + P + QK+WY V ++GG +L R +
Sbjct: 74 ATVGQSVLNIQYKNDFS------PKLR--YQPP--SKNQKLWYAVCTIGGTWLEER--CY 121
Query: 157 SAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARL 214
FR R LA + V + G+ K +N L FL G++ L E+ L R
Sbjct: 122 DLFR------NRHLASFGKARQCVNIMVGLLKLGGLINFLIFLQRGKFATLTERLLGIRS 175
Query: 215 VYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDT 274
V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS + + + D
Sbjct: 176 VFCKPQNVREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCIPLTGAPTSDN 235
Query: 275 V------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
C +C P +P + C+H +CYYC+++ F C +C V ++Q
Sbjct: 236 TLATSGKQCSLCGEWPTMPH-TIGCEHIFCYYCVKSSFLFDMYFTCPKCGTEVQSLQ 291
>sp|P24392|PEX2_RAT Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3)
emb|CAA41054.1| peroxisome assembly factor-1 [Rattus rattus]
dbj|BAA06306.1| peroxisome assembly factor-1 [Rattus norvegicus]
gb|AAH63169.1| Peroxisomal membrane protein 3 [Rattus norvegicus]
gb|EDM01038.1| peroxisomal membrane protein 3, isoform CRA_a [Rattus norvegicus]
gb|EDM01039.1| peroxisomal membrane protein 3, isoform CRA_a [Rattus norvegicus]
gb|EDM01040.1| peroxisomal membrane protein 3, isoform CRA_a [Rattus norvegicus]
prf||1706355A peroxisome assembly factor 1
Length = 305
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 90/300 (30%), Positives = 150/300 (50%), Gaps = 33/300 (11%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL +WRF+I+
Sbjct: 14 VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCVASVGGQYLFSRL 153
T G +++N++Y+++ P P QK+ Y V ++GG++L R
Sbjct: 74 ATVGQSVLNIQYKNDSS-------------PNPVYQPPSKNQKLLYAVCTIGGRWLEER- 119
Query: 154 QSFSAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALK 211
+ FR R LA + + + G+ K +N L FL G++ L E+ L
Sbjct: 120 -CYDLFR------NRHLASFGKAKQCMNFVVGLLKLGELMNFLIFLQKGKFATLTERLLG 172
Query: 212 ARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTK 271
V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS + +S+
Sbjct: 173 IHSVFCKPQSMREVGFEYMNRELLWHGFAEFLVFLLPLINIQKLKAKLSSWCIPLTSTAG 232
Query: 272 EDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
D+ C +C P +P + C+H +CYYC+++ F C +C V ++Q
Sbjct: 233 SDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDMYFTCPKCGTEVHSVQ 291
>ref|NP_058930.1| peroxin 2 [Rattus norvegicus]
dbj|BAA06307.1| peroxisome assembly factor-1 [Rattus norvegicus]
Length = 305
Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 35/301 (11%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL +WRF+I+
Sbjct: 14 VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCVASVGGQYLFSRL 153
T G +++N++Y+++ P P QK+ Y V ++GG++L R
Sbjct: 74 ATVGQSVLNIQYKNDSS-------------PNPVYQPPSKNQKLLYAVCTIGGRWLEERC 120
Query: 154 QSFSAFRR---WGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKAL 210
R +G ++Q + + G+ K +N L FL G++ L E+ L
Sbjct: 121 YDLFPNRHLASFGKAKQ---------CMNFVVGLLKLGELMNFLIFLQKGKFATLTERLL 171
Query: 211 KARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSST 270
V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS + +S+
Sbjct: 172 GIHSVFCKPQSMREVGFEYMNRELLWHGFAEFLVFLLPLINIQKLKAKLSSWCIPLTSTA 231
Query: 271 KEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAI 324
D+ C +C P +P + C+H +CYYC+++ F C +C V ++
Sbjct: 232 GSDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDMYFTCPKCGTEVHSV 290
Query: 325 Q 325
Q
Sbjct: 291 Q 291
>gb|AAH00661.1| Peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
Length = 305
Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 25/308 (8%)
Query: 26 LASRRSVIPVA--ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ A + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKND----------FSPNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFR----NHHLASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGERPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQ 325
V ++Q
Sbjct: 284 GTEVHSLQ 291
>gb|ABZ92521.1| peroxisomal membrane protein 3, 35kDa (Zellweger syndrome)
[synthetic construct]
Length = 305
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 25/308 (8%)
Query: 26 LASRRSVIPVA--ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ A + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKND----------FSPNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFR----NHHLASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQ 325
V ++Q
Sbjct: 284 GTEVHSLQ 291
>ref|NP_000309.1| peroxin 2 [Homo sapiens]
ref|NP_001073336.1| peroxin 2 [Homo sapiens]
sp|P28328|PEX2_HUMAN Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3) (35 kDa peroxisomal membrane
protein) (RING finger protein 72)
gb|AAF97687.1|AF133826_1 35 kDa peroxisomal membrane protein [Homo sapiens]
gb|AAC12785.1| peroxisome assembly factor-1 [Homo sapiens]
gb|AAA60141.1| peroxisomal membrane protein
gb|AAH05375.1| Peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
gb|AAH93043.1| Peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
Length = 305
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 152/308 (49%), Gaps = 25/308 (8%)
Query: 26 LASRRSVIPVA--ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ A + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKND----------FSPNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFR----NHHLASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQ 325
V ++Q
Sbjct: 284 GTEVHSLQ 291
>sp|P55098|PEX2_MOUSE Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3)
gb|AAA21742.1| peroxisome assembly factor-1
Length = 305
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 88/300 (29%), Positives = 149/300 (49%), Gaps = 33/300 (11%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL +WRF+I+
Sbjct: 14 VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCVASVGGQYLFSRL 153
T G +++N++++++ P P QK+ Y V ++GG++L R
Sbjct: 74 ATVGQSVLNIQHKNDSS-------------PNPVYQPPSKNQKLLYAVCTIGGRWLEER- 119
Query: 154 QSFSAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALK 211
+ FR R LA + + + G+ K +N L FL G++ L E+ L
Sbjct: 120 -CYDLFR------NRHLASFGKAKQCMNFVVGLLKLGELMNFLIFLQKGKFATLTERLLG 172
Query: 212 ARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTK 271
V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS + + +
Sbjct: 173 IHSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCTLCTGAAG 232
Query: 272 EDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
D+ C +C P +P + C+H +CYYC+++ F C +C V ++Q
Sbjct: 233 HDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCPKCGTEVHSVQ 291
>gb|EAW87052.1| peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
Length = 305
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 151/308 (49%), Gaps = 25/308 (8%)
Query: 26 LASRRSVIPVA--ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ A + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKND----------FSPNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFR----NHHLASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNICEVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQ 325
V ++Q
Sbjct: 284 GTEVHSLQ 291
>sp|Q06438|PEX2_CRIGR Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3)
emb|CAA78929.1| peroxisome assembly factor 1 [Cricetulus griseus]
dbj|BAA06308.1| peroxisome assembly factor-1 [Cricetulus griseus]
Length = 304
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 87/297 (29%), Positives = 153/297 (51%), Gaps = 27/297 (9%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L +WRF+I+
Sbjct: 13 VLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACLWLFLWRFTIYSKN 72
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G +++N++Y+++ +++ + P + QK+WY V ++GG++L R +
Sbjct: 73 ATVGQSVLNIQYKNDFSSNSRY--------QPP--SKNQKLWYAVCTIGGRWLEER--CY 120
Query: 157 SAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARL 214
FR R LA ++ + + G+ K +N L FL G++ L E+ L
Sbjct: 121 DLFR------NRHLASFGKVKQCMNVMVGLLKLGELINFLIFLQKGKFATLTERLLGIHS 174
Query: 215 VYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDT 274
V+ P R V F+YMNR+L+W+ F+E L+ LLPL+N K LS + + + D+
Sbjct: 175 VFCKPQNIREVGFDYMNRELLWHGFAEFLIFLLPLINIQKFKAKLSSWCIPLTGAASSDS 234
Query: 275 VT------CPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
C +C P +P + C+H +CYYC+++ F C +C V ++Q
Sbjct: 235 ALASSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDMYFTCPKCGIEVHSVQ 290
>ref|XP_519817.2| PREDICTED: peroxisomal membrane protein 3 [Pan troglodytes]
Length = 326
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 81/272 (29%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 60 LVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHL 119
+ F KPG+L ++EPE+ A L +WRF+I+ T G +++N++Y+++
Sbjct: 58 FTQCFHGFKPGLLARFEPEVKACLWVFLWRFTIYSKNATVGQSVLNIKYKND-------- 109
Query: 120 GKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQ 179
L + QKIWY V ++GG++L R + FR + Q ++ V
Sbjct: 110 --FSPNLRYQPPSKNQKIWYAVCTIGGRWLEER--CYDLFR----NHQLASFGKVKQCVN 161
Query: 180 RIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEF 239
+ G+ K +N L FL G++ L E+ L V+ P R V FEYMNR+L+W+ F
Sbjct: 162 FVIGLLKLGGLINFLIFLQRGKFATLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGF 221
Query: 240 SEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTV------TCPICQVDPAIPFIALPC 293
+E L+ LLPL+N +K LS + + + D C +C P +P + C
Sbjct: 222 AEFLIFLLPLINVQKLKAKLSSWCIPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIGC 280
Query: 294 QHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
+H +CY+C ++ F C +C V ++Q
Sbjct: 281 EHIFCYFCAKSSFLFDMYFTCPKCGTEVHSLQ 312
>gb|EEH57229.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 274
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 88/231 (38%), Positives = 135/231 (58%), Gaps = 22/231 (9%)
Query: 35 VAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWV 94
V + RV+Q DA RLD E++++L+EQ K+F ++P + ++PE+ L+ L++ ++++
Sbjct: 25 VRVLRVSQIDAGRLDGELASLLREQFSKIFLTLRPDVPIAWQPEITLALDALVFYYTVYK 84
Query: 95 DKPTPGNALMNLRYRDERGVVAQH--LGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSR 152
+PTPG LMNLRYRDER A G V +G+EG L++ Q++ Y VA VG +Y +S+
Sbjct: 85 SRPTPGMELMNLRYRDERRGAATRPARGGVTSGMEGAPLSATQRLVYGVAFVGARYAWSK 144
Query: 153 LQSFSAFRRWGDSEQRPLA--------------------RRLWTLVQRIEGIYKAASFLN 192
L ++ RW D RR + +E + AAS N
Sbjct: 145 LTRHASVHRWADDGPEEEEEEEEEGRARARARARPWSWRRRASRAIDVVENAHAAASAAN 204
Query: 193 LLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEML 243
LL FL G+YR L+E+ ++ARLVY P+++R +SFEY+NRQLVW E +L
Sbjct: 205 LLLFLRDGKYRTLLERLVRARLVYDEPNVSRVISFEYLNRQLVWRELRCVL 255
>ref|XP_001837282.1| hypothetical protein CC1G_00418 [Coprinopsis cinerea okayama7#130]
gb|EAU84899.1| hypothetical protein CC1G_00418 [Coprinopsis cinerea okayama7#130]
Length = 411
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 104/380 (27%), Positives = 166/380 (43%), Gaps = 85/380 (22%)
Query: 23 QSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAF 82
QS L S V P I RV Q D+ LD E++ +L+E + K +L+ + +++PE+ F
Sbjct: 2 QSTLISEEPVKP-RIIRVGQLDSELLDQELAQLLQEPVSKALSLINVSLKSRFDPEIRLF 60
Query: 83 LEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVA 142
++ ++++FS+W + G L +L Y V G T P T + +
Sbjct: 61 IQLVLYKFSVWNTGASYGAKLQDLHY-----AVPISKGNAATTSRIPRRTLA---IHALL 112
Query: 143 SVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRY 202
++ G Y +RL++++ W D+ + R+ W L++ +E ++ + S N FL+ GRY
Sbjct: 113 TLLGPYFHTRLRTYALSHAWPDAPSSDIRRKAWNLLELLESMHASLSLANFTLFLWNGRY 172
Query: 203 RNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVK------ 256
R L ++ L RLV + R VS+E+MNRQ+VW+ F+E LL LPL+++ V+
Sbjct: 173 RTLADRLLSMRLVPSRHQVRRDVSYEFMNRQMVWHAFTEFLLFFLPLIDARTVRKRFYRL 232
Query: 257 --------------------------NILS-PFAKDKSSSTKEDTVTCPICQVDPA---- 285
N+ S P K K ++ ED C IC + +
Sbjct: 233 AAWCSPSAALSLLPSKALSTLGISQSNLASKPQKKAKYANAPED--QCAICAENASFNPN 290
Query: 286 -------------------------------IPFIALPCQHRYCYYCIRTRCASAAS--- 311
IP+I C H YCY+CI R +A
Sbjct: 291 PSEQANMFTAMALPVLDTSSSEETISPYPIHIPYIT-SCGHVYCYHCIAERMIRSADDGD 349
Query: 312 --FRCLRCNEPVVAIQREGV 329
+ CLRC E V R V
Sbjct: 350 QGWECLRCCEIVQGADRYSV 369
>ref|XP_001202188.1| PREDICTED: similar to peroxisomal membrane protein 3, 35kDa
(Zellweger syndrome), partial [Strongylocentrotus
purpuratus]
ref|XP_797522.2| PREDICTED: similar to peroxisomal membrane protein 3, 35kDa
(Zellweger syndrome), partial [Strongylocentrotus
purpuratus]
Length = 340
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 85/275 (30%), Positives = 136/275 (49%), Gaps = 22/275 (8%)
Query: 35 VAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWV 94
V S+ + DA +LD E+ +L+ QL K F +PG+L + +PE++A L LIW FSI
Sbjct: 82 VGDSKTSDLDAHQLDDELHLLLRAQLTKAFQFFRPGVLSKCDPEVNAVLRLLIWHFSISK 141
Query: 95 DKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQ 154
T G ++N+ Y + + G L ++ Y + VG ++ R
Sbjct: 142 VGATLGQQMLNMLYTNS----------LPQGQRSLSLDRKHQLLYALLLVGCRWFQERSS 191
Query: 155 SFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARL 214
S G SE+ L +W L+ +E + K AS +N L FL G Y +L+E+ L
Sbjct: 192 DLSLMT--GSSEKFQL---VWKLIDLLERLVKVASLVNFLVFLQQGFYPSLLERVLGIIP 246
Query: 215 VYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILS------PFAKDKSS 268
+ P R V+FE+M R+L+W+ F+E L LLPL+N ++N++ P +
Sbjct: 247 RFAQPQSVRQVTFEFMTRELLWHGFAEFLFFLLPLVNIHRIRNVIRRRIAGVPSGRGTLQ 306
Query: 269 STKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIR 303
+ + C +C P P + CQH +CYYC++
Sbjct: 307 RSLAECKECAVCGEWPTCP-QEMGCQHVFCYYCLK 340
>ref|XP_001220945.1| hypothetical protein CHGG_01724 [Chaetomium globosum CBS 148.51]
gb|EAQ93489.1| hypothetical protein CHGG_01724 [Chaetomium globosum CBS 148.51]
Length = 597
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 99/343 (28%), Positives = 151/343 (44%), Gaps = 73/343 (21%)
Query: 39 RVNQFDAARLDVEMSAMLKEQLVKVF---------------TLMKPGMLFQYEPELDAFL 83
RV Q DA LD E+ +L+ Q+ +L +E E+ L
Sbjct: 139 RVGQVDAELLDEELVGLLRGQVGDALRYVGGGVGGGGGGAGGAGGSAVLHDWEAEVSLVL 198
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYC 140
++++ ++W T G AL NLRY D R +GPGL P QK Y
Sbjct: 199 RAVLFKLTVWDHDATYGAALQNLRYTDAR-------------RDGPGLVPPSKWQKSLYG 245
Query: 141 VASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTG 200
+ +VGG+YL+++ + + + G P A+RL + ++ +A+F + L FL G
Sbjct: 246 LVTVGGRYLWAKWEDWLLEQDDGFQGPSPGAQRLARWSSMLSTMHASAAFASFLVFLLHG 305
Query: 201 RYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSS------- 253
RYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+ +
Sbjct: 306 RYRTLLDRVLRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLVGINRWRRWLA 365
Query: 254 ----AVKNILSPFAKDKSSSTKEDTV----TCPIC------------------------- 280
K I++ A+ E + TC IC
Sbjct: 366 RTWRKTKKIMTTGAEGADEKKGEYSFLPERTCAICYQDQNSVSSENDLMAATSSGVVGSA 425
Query: 281 QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPV 321
Q D P+ +PC YC+ C+ TR + CLRC E V
Sbjct: 426 QTDITNPYATIPCGCIYCFVCLTTRIEREEGEGWSCLRCGELV 468
>ref|XP_504845.1| YlPEX2 [Yarrowia lipolytica]
sp|Q99155|PEX2_YARLI Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal protein
PAY5)
emb|CAG77647.1| YlPEX2 [Yarrowia lipolytica CLIB122]
Length = 381
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 101/329 (30%), Positives = 150/329 (45%), Gaps = 55/329 (16%)
Query: 34 PVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIW 93
PV RV+Q DA+ LD E+ +LK QL K FT P +YE EL L+ ++++ ++W
Sbjct: 13 PVPNVRVHQLDASLLDAELVDLLKNQLFKGFTNFHPEFRDKYESELVLALKLILFKLTVW 72
Query: 94 VDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRL 153
T G L NL++ D R H K++ P + QK+ Y + VGG YL+S++
Sbjct: 73 DHAITYGGKLQNLKFIDSR-----HSSKLQIQ---PSVI--QKLGYGILVVGGGYLWSKI 122
Query: 154 QSFSAFRRWGDSEQ-------RPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLI 206
+ + R D AR + +Y AA+ N ++FLYTGRY +I
Sbjct: 123 EGYLLARSEDDVATDGTSVRGASAARGALKVANFASLLYSAATLGNFVAFLYTGRYATVI 182
Query: 207 EKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLL----------------LPLL 250
+ L+ RLV +R VS+E+ NRQLVWN F+E L+ + L L
Sbjct: 183 MRLLRIRLVPSQRTSSRQVSYEFQNRQLVWNAFTEFLIFILPLLQLPKLKRRIERKLQSL 242
Query: 251 NSSAVKNILSPFAKDKSSSTKEDTVTCPIC----------------QVDPAIPFIALPCQ 294
N + V N+ + + ++ TC IC D P+ A C
Sbjct: 243 NVTRVGNVEEASEGELAHLPQK---TCAICFRDEEEQEGGGGASHYSTDVTNPYQA-DCG 298
Query: 295 HRYCYYCIRTRCAS--AASFRCLRCNEPV 321
H YCY C+ T+ A + C RC + V
Sbjct: 299 HVYCYVCLVTKLAQGDGDGWNCYRCAKQV 327
>ref|XP_001912471.1| unnamed protein product [Podospora anserina]
sp|P51021|PEX2_PODAN Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal protein
CAR1)
emb|CAA60739.1| peroxisome assembly factor [Podospora anserina]
emb|CAP59952.1| unnamed protein product [Podospora anserina]
Length = 554
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 105/350 (30%), Positives = 163/350 (46%), Gaps = 69/350 (19%)
Query: 26 LASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL---VKVFTLMKP---GMLFQYEPEL 79
++SR P RV Q DA LD E+ ++K Q+ V+ + + +++ E+
Sbjct: 105 ISSREGTRPAF--RVGQVDAELLDEELVELMKGQVGEAVRYYGGGGGGDNNIKHEWDAEI 162
Query: 80 DAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QK 136
L +I++ +IW T G AL NL+Y D A+H G V L P QK
Sbjct: 163 SLALRAVIFKLTIWDHDATYGAALQNLKYTD-----ARHTGSV--------LVPPSKWQK 209
Query: 137 IWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSF 196
Y + +VGG+Y++S+ +++ + G E P +RL ++ R+ ++ AASF + L F
Sbjct: 210 GLYGLMTVGGRYMWSKWENWLREQDGGYDEPSPTVQRLSSMTDRLSTLHAAASFASFLVF 269
Query: 197 LYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSS--- 253
L GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+ +
Sbjct: 270 LLQGRYRTLLDRVLRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLVGINRWR 329
Query: 254 --------AVKNILSPFAKDKSSSTKEDTV-----TCPIC-------------------- 280
K I+S + + K + TC IC
Sbjct: 330 RWLARTWRKTKKIMSTTGGEGAEEKKGEFAFLPERTCAICYQDQNQATNENELMAAATSK 389
Query: 281 -------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPV 321
Q D P+ +PC YC+ C+ TR + CLRC E V
Sbjct: 390 TGVVGSAQTDVTNPYETIPCGCVYCFVCLATRIEREEGEGWNCLRCGELV 439
>ref|XP_964597.1| peroxisomal biogenesis factor 2 [Neurospora crassa OR74A]
gb|EAA35361.1| peroxisomal biogenesis factor 2 [Neurospora crassa OR74A]
Length = 639
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 109/356 (30%), Positives = 162/356 (45%), Gaps = 78/356 (21%)
Query: 26 LASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDA---- 81
++SR P RV Q DA LD E+ +L+ Q+ + G+ + E DA
Sbjct: 104 ISSREGTRPAF--RVGQVDAELLDAELVDLLRTQVGDALKYIGGGVSSTLKDEWDAEILL 161
Query: 82 FLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIW 138
L ++++ +IW T G AL NLRY D R GP L P QK
Sbjct: 162 ILRAILFKLTIWDHDATYGAALQNLRYTDARK-------------SGPVLQPPSKLQKSL 208
Query: 139 YCVASVGGQYLFSRLQSF-------SAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFL 191
Y +VGG+YL+++ +++ S++ G + P +RL L + I + ASF
Sbjct: 209 YGFVTVGGKYLWTKWETYLLDHDEASSYSVEGPN---PNIQRLSRLTESIGTFHAFASFA 265
Query: 192 NLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLN 251
+ L FL GRYR ++++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+
Sbjct: 266 SFLVFLLHGRYRTILDRLLRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLVG 325
Query: 252 SSAVKNILS-PFAKDKS----SSTKEDTV------------TCPIC-------------- 280
+ + L+ + + KS SST + T TC IC
Sbjct: 326 INRWRRWLARTWRRTKSMLTTSSTNDPTQNKGGEFAFLPERTCAICYQDQNSAKSEAELM 385
Query: 281 -------------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPV 321
Q D P+ A+PC YC+ C+ TR + CLRC E V
Sbjct: 386 AAASSSSGVVGSAQTDITNPYEAMPCGCVYCFVCVATRIEREEGEGWTCLRCGELV 441
>gb|EEH34726.1| peroxisomal biogenesis factor 2 [Paracoccidioides brasiliensis
Pb01]
Length = 488
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 100/334 (29%), Positives = 149/334 (44%), Gaps = 64/334 (19%)
Query: 39 RVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPT 98
RV Q DA LD E+ +LK Q+ + + + E+ L ++++ S+W +
Sbjct: 71 RVGQVDAELLDEELLTLLKGQVGEGLKYFGSHIKEDWTHEIQFALRAILFKLSVWDHNAS 130
Query: 99 PGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCVASVGGQYLFSRLQS 155
G AL NL+Y D R +GP L+ P QK Y + +VGG+Y++ + +S
Sbjct: 131 YGAALQNLKYTDSRQ-------------KGPTLSDPTKWQKALYGLYTVGGRYIWDKWES 177
Query: 156 FSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLV 215
+ + G +E P R L + I + ASF++ L FL GRYR LI++ L+ RL
Sbjct: 178 WLIDQEGGYNEPSPQIRLLSRITNTISTTHSIASFVSFLVFLTNGRYRTLIDRLLRMRLA 237
Query: 216 YRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPL---------LNSSAVKNILSPFAKDK 266
S ++R VSFEY+NRQLVW+ F+E LL LLPL ++ + K +LS D+
Sbjct: 238 PPSTQVSREVSFEYLNRQLVWHAFTEFLLFLLPLVGIGRWRRWISRAWRKTMLSLRTADE 297
Query: 267 SSSTKEDTV---------TCPIC----------------------------QVDPAIPFI 289
+ CPIC Q D P+
Sbjct: 298 GDDEQVKAQGELAFLPERACPICYQEQNPAARSENDVLGASGGSGGIIGSAQTDVVNPYE 357
Query: 290 ALPCQHRYCYYCI--RTRCASAASFRCLRCNEPV 321
+PC YC+ CI + + CLRC E V
Sbjct: 358 TMPCGCIYCFVCIAEKLEAEEGEGWICLRCGEIV 391
>ref|XP_661660.1| hypothetical protein AN4056.2 [Aspergillus nidulans FGSC A4]
gb|EAA58944.1| hypothetical protein AN4056.2 [Aspergillus nidulans FGSC A4]
Length = 444
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 101/334 (30%), Positives = 148/334 (44%), Gaps = 64/334 (19%)
Query: 39 RVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPT 98
RV Q DA LD E+ +LK Q+ P + + E+ L ++++ SIW +
Sbjct: 74 RVGQVDAELLDEELLGLLKGQVGDALKYFGPHLRDDWSHEIQFVLRAILFKLSIWDHDAS 133
Query: 99 PGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCVASVGGQYLFSRLQS 155
G AL +L+Y D R +GP ++P QK Y + +VGG+Y + + +S
Sbjct: 134 YGAALQSLKYVDSRS-------------KGPVHSTPTMLQKSLYGLLTVGGRYAWDKWES 180
Query: 156 FSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLV 215
+ R G E P R L + + + A+F + L FL GRYR LI++ L+ RL
Sbjct: 181 WLISREGGYEEPSPEVRSLSRITNFLSTTHSIAAFFSFLIFLVDGRYRTLIDRLLRMRLT 240
Query: 216 YRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILS-----PFAKDKSSST 270
S +R VSFEY+NRQLVW+ F+E LL LLPL+ S + +S + +S+S
Sbjct: 241 PPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRWRRWVSRAWRKAMSAIRSTSV 300
Query: 271 KEDTV-------------TCPIC----------------------------QVDPAIPFI 289
ED V +C IC Q D P+
Sbjct: 301 DEDEVSEKQGELAFLPERSCAICYKANNTATTETEVIAAASSGAGGIIGSAQTDITNPYE 360
Query: 290 ALPCQHRYCYYCI--RTRCASAASFRCLRCNEPV 321
+PC YC+ CI + + CLRC E V
Sbjct: 361 TIPCGCIYCFVCIVQKLEGEEGEGWVCLRCGELV 394
>ref|XP_001013694.1| Pex2 / Pex12 amino terminal region family protein [Tetrahymena
thermophila SB210]
gb|EAR93449.1| Pex2 / Pex12 amino terminal region family protein [Tetrahymena
thermophila SB210]
Length = 303
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 39 RVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPT 98
R+NQ +A ++D E S +LK+ LVK F P + +Y PE + ++F+ +R ++ +
Sbjct: 8 RINQLEALKIDQECSNLLKDGLVKAFQYFNPQTVNKYIPEFNLIVDFIYFRETVNKNNNL 67
Query: 99 PGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSA 158
PGN L N++Y A L LE L++ +KI + + V G Y ++L +
Sbjct: 68 PGNQLQNVKY------TASDL------LENGNLSNKRKIIFFLVKVVGTYAINKLHNLIT 115
Query: 159 FRRWG-----DSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKAR 213
R D E+ + L ++ E IYK + N +SFL G+YR++ E+ +
Sbjct: 116 LRNISNNGNNDQEESKFYKILKKILDVGEKIYKVLNLANFVSFLINGKYRSIEERICGIQ 175
Query: 214 LVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNS----SAVKNI--LSPFAKDKS 267
+ Y + + R + FE +NR ++W S+ + LPL N+ V N+ + F S
Sbjct: 176 MGYINSQVVRYLDFELINRTIIWGIISDFVKFALPLANNMRLFKMVSNLFMFTTFLGSIS 235
Query: 268 SSTKEDT--VTCPICQ-VDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ +D V C +C+ +P C+H +CYYCI + S A + ++C
Sbjct: 236 NDASQDIADVKCGVCEDSQMTMPRQINNCKHIFCYYCITSYLQSKAGQQNIKC 288
>gb|AAC49423.1| Pay5p
Length = 380
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 100/329 (30%), Positives = 149/329 (45%), Gaps = 56/329 (17%)
Query: 34 PVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIW 93
PV RV+Q DA+ LD E+ +LK QL K FT P +YE EL L+ ++++ ++W
Sbjct: 13 PVPNVRVHQLDASLLDAELVDLLKNQLFKGFTNFHPEFRDKYESELVLALKLILFKLTVW 72
Query: 94 VDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRL 153
T G L NL++ D R H K++ P + QK+ Y + VGG YL+S++
Sbjct: 73 DHAITYGGKLQNLKFIDSR-----HSSKLQI---QPSVI--QKLGYGILVVGGGYLWSKI 122
Query: 154 QSFSAFRRWGDSEQ-------RPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLI 206
+ + R D AR + +Y AA+ N ++FLYTG Y +I
Sbjct: 123 EGYLLARSEDDVATDGTSVRGASAARGALKVANFASLLYSAATLGNFVAFLYTG-YATVI 181
Query: 207 EKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLL----------------LPLL 250
+ L+ RLV +R VS+E+ NRQLVWN F+E L+ + L L
Sbjct: 182 MRLLRIRLVPSQRTSSRQVSYEFQNRQLVWNAFTEFLIFILPLLQLPKLKRRIERKLQSL 241
Query: 251 NSSAVKNILSPFAKDKSSSTKEDTVTCPIC----------------QVDPAIPFIALPCQ 294
N + V N+ + + ++ TC IC D P+ A C
Sbjct: 242 NVTRVGNVEEASEGELAHLPQK---TCAICFRDEEEQEGGGGASHYSTDVTNPYQA-DCG 297
Query: 295 HRYCYYCIRTRCAS--AASFRCLRCNEPV 321
H YCY C+ T+ A + C RC + V
Sbjct: 298 HVYCYVCLVTKLAQGDGDGWNCYRCAKQV 326
>gb|EEH42793.1| peroxisomal biogenesis factor 2 [Paracoccidioides brasiliensis
Pb18]
Length = 488
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 100/334 (29%), Positives = 145/334 (43%), Gaps = 64/334 (19%)
Query: 39 RVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPT 98
RV Q DA LD E+ +LK Q+ + + + E+ L ++++ S+W +
Sbjct: 71 RVGQVDAELLDEELLTLLKGQVGEGLKYFGSHIKEDWTHEIQFALRAILFKLSVWDHNAS 130
Query: 99 PGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCVASVGGQYLFSRLQS 155
G AL NL+Y D R +GP L+ P QK Y + +VGG+Y++ + +S
Sbjct: 131 YGAALQNLKYTDSRQ-------------KGPTLSDPTKSQKALYGLFTVGGRYIWDKWES 177
Query: 156 FSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLV 215
+ + G E R L + I + ASF++ L FL GRYR LI++ L+ RL
Sbjct: 178 WLIDQEGGYDEPSTQIRLLSRITNTISTTHSIASFVSFLVFLTNGRYRTLIDRLLRMRLA 237
Query: 216 YRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKN-ILSPFAKDKSSSTKED- 273
++R VSFEY+NRQLVW+ F+E LL LLPL+ + I + K SS D
Sbjct: 238 PPFTQVSREVSFEYLNRQLVWHAFTEFLLFLLPLVGIGRWRRWITRAWRKTMSSLRTADE 297
Query: 274 ----------------TVTCPIC----------------------------QVDPAIPFI 289
TCPIC Q D P+
Sbjct: 298 GNDEQVKAQGGLAFLPERTCPICYQEQNPAARSENDVLGASGASGGIIGSAQTDVVNPYE 357
Query: 290 ALPCQHRYCYYCI--RTRCASAASFRCLRCNEPV 321
+PC YC+ CI + + CLRC E V
Sbjct: 358 TMPCGCIYCFVCIAEKLEAEEGEGWICLRCGEIV 391
>ref|XP_001265299.1| peroxisome biosynthesis protein (Peroxin-2), putative [Neosartorya
fischeri NRRL 181]
gb|EAW23402.1| peroxisome biosynthesis protein (Peroxin-2), putative [Neosartorya
fischeri NRRL 181]
Length = 479
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 101/331 (30%), Positives = 144/331 (43%), Gaps = 61/331 (18%)
Query: 39 RVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPT 98
RV Q DA LD E+ +LK Q+ P + + E+ L ++++ SIW +
Sbjct: 74 RVGQVDAELLDEELLGLLKGQVGNALKYFGPQLREDWSHEIQFALRAILFKLSIWDHNAS 133
Query: 99 PGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCVASVGGQYLFSRLQS 155
G AL LRY D R +GP ++P QK Y + +VGG+Y + + +S
Sbjct: 134 YGAALQGLRYVDSRS-------------KGPVHSTPTKWQKSLYGLLTVGGRYAWEKWES 180
Query: 156 FSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLV 215
+ + G E R L L + + A+F++ L FL GRYR LI++ L+ RL
Sbjct: 181 WLIGQEGGYEEPSRDVRMLARLTDLVSTTHSIAAFVSFLVFLVNGRYRTLIDRILRIRLT 240
Query: 216 YRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILS-----PFAKDKSSST 270
S R VSFEY+NRQLVW+ F+E LL LLPL+ S + LS + +S
Sbjct: 241 PPSAQSAREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRWRRWLSRAWRKTISAIRSRDD 300
Query: 271 KEDTV------------TCPIC--------------------------QVDPAIPFIALP 292
ED V TC IC Q D P+ +P
Sbjct: 301 DEDEVEKRGELAFLPERTCAICYKDQNPASTSENDIIAASAGGIVGSAQTDITNPYETVP 360
Query: 293 CQHRYCYYCI--RTRCASAASFRCLRCNEPV 321
C YC+ C+ + + CLRC E V
Sbjct: 361 CGCIYCFVCLVQKVEGEEGEGWICLRCGEIV 391
>ref|XP_001398873.1| hypothetical protein An18g04150 [Aspergillus niger]
emb|CAK43217.1| unnamed protein product [Aspergillus niger]
Length = 481
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 99/333 (29%), Positives = 146/333 (43%), Gaps = 63/333 (18%)
Query: 39 RVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPT 98
RV Q DA LD E+ +LK Q+ P + + E+ L ++++ SIW +
Sbjct: 74 RVGQVDAELLDEELLGLLKGQVGDALKYYGPQLREDWSHEIQFALRAILFKLSIWDHDAS 133
Query: 99 PGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCVASVGGQYLFSRLQS 155
G AL NL+Y D R +GP ++P QK Y + +VGG+Y + + +S
Sbjct: 134 YGAALQNLKYIDSRS-------------KGPVHSAPTKWQKSLYGLLTVGGRYAWGKWES 180
Query: 156 FSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLV 215
+ + G E R L + + + A+F++ L FL GRYR L+++ L+ RL+
Sbjct: 181 WLINQESGYEEPSQEVRMLARMTDLVSASHSIAAFVSFLVFLVNGRYRTLVDRVLRMRLI 240
Query: 216 YRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKD-----KSSST 270
S +R VSFEY+NRQLVW+ +E LL LLPL+ S + LS + KS S
Sbjct: 241 PPSAQASREVSFEYLNRQLVWHAMTEFLLFLLPLVGISRWRRWLSRLWRKTLSTLKSGSE 300
Query: 271 KEDTV------------TCPIC----------------------------QVDPAIPFIA 290
E+ TC IC Q D P+
Sbjct: 301 DEEQTGKQGELAFLPERTCAICYKDNNPTSTTEGEAIAASASSGGIVGSAQTDITNPYEI 360
Query: 291 LPCQHRYCYYCI--RTRCASAASFRCLRCNEPV 321
+PC YC+ CI + + CLRC E V
Sbjct: 361 IPCGCIYCFVCIVQKLEGEEGEGWVCLRCGEIV 393
>ref|XP_001212277.1| peroxisomal biogenesis factor 2 [Aspergillus terreus NIH2624]
gb|EAU36373.1| peroxisomal biogenesis factor 2 [Aspergillus terreus NIH2624]
Length = 473
Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 107/355 (30%), Positives = 155/355 (43%), Gaps = 73/355 (20%)
Query: 39 RVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPT 98
RV Q DA LD E+ +LK Q+ P + + E+ L L+++ SIW +
Sbjct: 74 RVGQVDAELLDEELLGLLKNQVGDALKYYGPQLREDWSNEIQFALRALLFKLSIWDHDAS 133
Query: 99 PGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCVASVGGQYLFSRLQS 155
G AL L+Y D R +GP ++P QK Y + +VGG+Y + + +S
Sbjct: 134 YGAALQGLKYVDSRS-------------KGPVHSTPTKWQKTLYGLLTVGGRYAWDKWES 180
Query: 156 FSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLV 215
+ + G E R L L + + A+F++ L FL GRYR L+++ L+ RL
Sbjct: 181 WLINQEGGYEEPSREVRLLSRLTDLVSTTHSIAAFISFLVFLVNGRYRTLVDRILRIRLT 240
Query: 216 YRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILS-----PFAKDKSSST 270
S +R VSFEY+NRQLVW+ F+E LL LLPL+ S + +S A KSS
Sbjct: 241 PPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRWRRWVSRAWRKTMATLKSSED 300
Query: 271 KEDTV------------TCPIC----------------------------QVDPAIPFIA 290
+++TV TC IC Q D P+ A
Sbjct: 301 EDETVEKQGELAFLPERTCGICYQQNNPSSATESEAIAASAASGGIIGSAQTDITNPYEA 360
Query: 291 LPCQHRYCYYCI--RTRCASAASFRCLRC----------NEPVVAIQREGVSSGK 333
+PC YC+ C+ + + CLRC N V+ R SSGK
Sbjct: 361 VPCGCVYCFVCLVQKIEGEEGEGWVCLRCGAVVKKCKPWNGDVLEEARPQSSSGK 415
>ref|XP_001269799.1| peroxisome biosynthesis protein (Peroxin-2), putative [Aspergillus
clavatus NRRL 1]
gb|EAW08373.1| peroxisome biosynthesis protein (Peroxin-2), putative [Aspergillus
clavatus NRRL 1]
Length = 486
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 101/335 (30%), Positives = 145/335 (43%), Gaps = 61/335 (18%)
Query: 39 RVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPT 98
RV Q DA LD E+ +LK Q+ P + + E+ L L+++ SIW +
Sbjct: 74 RVGQVDAELLDEELLGLLKNQVGDALKYFGPQLREDWSHEIQFVLRALLFKLSIWDHNAS 133
Query: 99 PGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCVASVGGQYLFSRLQS 155
G AL LRY D R +GP ++P QK Y + +VGG+Y + + +S
Sbjct: 134 YGAALQGLRYVDCRS-------------KGPVHSTPTRWQKTIYGLLTVGGRYAWEKWES 180
Query: 156 FSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLV 215
+ + G E R L + I + A+F + L FL GRYR L+++ L+ RL
Sbjct: 181 WLINQEGGYEEPSREVRMLSRMTDLISTTHSIAAFTSFLVFLVNGRYRTLVDRILRIRLT 240
Query: 216 YRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKD-----KSSST 270
S R VSFEY+NRQLVW+ F+E LL LLPL+ S + LS + +SS
Sbjct: 241 PPSAQSAREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRWRRWLSRVWRKMISAIRSSGD 300
Query: 271 KEDTV------------TCPIC--------------------------QVDPAIPFIALP 292
++ V TC IC Q D P+ +P
Sbjct: 301 DDEPVEKQGELAYLPERTCAICYKDQNPTSTSENEVMAASSGGIVGSAQTDITNPYETIP 360
Query: 293 CQHRYCYYCI--RTRCASAASFRCLRCNEPVVAIQ 325
C YC+ C+ + + CLRC E V Q
Sbjct: 361 CGCIYCFVCLVQKVEGEEGEGWVCLRCGEIVKRCQ 395
>ref|XP_001816880.1| hypothetical protein [Aspergillus oryzae RIB40]
dbj|BAE54878.1| unnamed protein product [Aspergillus oryzae]
Length = 516
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 98/333 (29%), Positives = 144/333 (43%), Gaps = 63/333 (18%)
Query: 39 RVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPT 98
RV Q DA LD E+ +LK Q+ P + E+ L ++++ SIW +
Sbjct: 121 RVGQVDAELLDEELLGLLKGQVGNALKYFGPQAREDWSHEIQFALRAILFKLSIWDHNAS 180
Query: 99 PGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCVASVGGQYLFSRLQS 155
G AL NL+Y D R +GP ++P QK Y + +VGG+Y + + +S
Sbjct: 181 YGAALQNLKYVDTRS-------------KGPIHSAPTKWQKSLYGLLTVGGRYAWEKWES 227
Query: 156 FSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLV 215
+ + G E R L + I + A+F++ L FL GRYR L+++ L+ RL
Sbjct: 228 WLINQEGGYDEPSREVRILARMTDLISTTHSIAAFISFLVFLVNGRYRTLVDRILRIRLT 287
Query: 216 YRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKED-- 273
S +R VSFEY+NRQLVW+ F+E LL LLPL+ S + +S + SS +
Sbjct: 288 PPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRWRRWISRAWRRTMSSIRSSDG 347
Query: 274 ---------------TVTCPIC----------------------------QVDPAIPFIA 290
TC IC Q D P+ A
Sbjct: 348 DSEEAEKQGELAFLPERTCAICYKASNPESATESEVIAASAASGGILGSAQTDITNPYEA 407
Query: 291 LPCQHRYCYYCI--RTRCASAASFRCLRCNEPV 321
+PC YC+ C+ + + CLRC E V
Sbjct: 408 IPCGCVYCFVCLVQKVEGEEGEGWICLRCGEIV 440
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
ref|NP_565222.1| TED3 (REVERSAL OF THE DET PHENOTYPE); prot... 495 e-138
gb|AAM61388.1| putative RING finger protein [Arabidopsis th... 493 e-138
gb|AAF68113.1|AC010793_8 F20B17.23 [Arabidopsis thaliana] 453 e-126
emb|CAO45868.1| unnamed protein product [Vitis vinifera] 452 e-125
ref|NP_001055075.1| Os05g0275700 [Oryza sativa (japonica cu... 448 e-124
ref|NP_974183.1| TED3 (REVERSAL OF THE DET PHENOTYPE); prot... 410 e-113
ref|XP_001781834.1| predicted protein [Physcomitrella paten... 387 e-106
ref|XP_001490672.1| PREDICTED: similar to Peroxisome assemb... 369 e-100
ref|NP_000309.1| peroxin 2 [Homo sapiens] >gi|121114290|ref... 368 e-100
gb|ABZ92521.1| peroxisomal membrane protein 3, 35kDa (Zellw... 367 e-100
dbj|BAE27238.1| unnamed protein product [Mus musculus] 366 1e-99
gb|AAH00661.1| Peroxisomal membrane protein 3, 35kDa (Zellw... 365 2e-99
gb|EDL05216.1| peroxisomal membrane protein 3, isoform CRA_... 365 3e-99
ref|NP_033020.2| peroxin 2 [Mus musculus] >gi|2623264|gb|AA... 364 6e-99
ref|NP_058930.1| peroxin 2 [Rattus norvegicus] >gi|1109648|... 364 6e-99
sp|P24392|PEX2_RAT Peroxisome assembly factor 1 (PAF-1) (Pe... 364 6e-99
gb|EAW87052.1| peroxisomal membrane protein 3, 35kDa (Zellw... 363 1e-98
ref|XP_001377812.1| PREDICTED: similar to Peroxisome assemb... 360 8e-98
ref|XP_544136.2| PREDICTED: similar to Peroxisome assembly ... 359 1e-97
sp|P55098|PEX2_MOUSE Peroxisome assembly factor 1 (PAF-1) (... 357 6e-97
ref|NP_001093818.1| peroxin 2 [Bos taurus] >gi|151554728|gb... 356 1e-96
sp|Q06438|PEX2_CRIGR Peroxisome assembly factor 1 (PAF-1) (... 355 3e-96
ref|NP_001008454.1| peroxin 2 [Gallus gallus] >gi|53127700|... 352 2e-95
ref|XP_001816880.1| hypothetical protein [Aspergillus oryza... 351 5e-95
ref|XP_001265299.1| peroxisome biosynthesis protein (Peroxi... 349 1e-94
ref|XP_001398873.1| hypothetical protein An18g04150 [Asperg... 346 1e-93
ref|XP_750106.1| peroxisome biosynthesis protein (Peroxin-2... 345 3e-93
ref|XP_001269799.1| peroxisome biosynthesis protein (Peroxi... 344 8e-93
ref|NP_001016841.1| peroxin 2 [Xenopus tropicalis] >gi|8927... 341 5e-92
ref|XP_661660.1| hypothetical protein AN4056.2 [Aspergillus... 341 5e-92
gb|EEH42793.1| peroxisomal biogenesis factor 2 [Paracoccidi... 341 6e-92
gb|EEH34726.1| peroxisomal biogenesis factor 2 [Paracoccidi... 339 2e-91
gb|EAZ33629.1| hypothetical protein OsJ_017112 [Oryza sativ... 338 4e-91
ref|XP_001220945.1| hypothetical protein CHGG_01724 [Chaeto... 337 7e-91
ref|XP_964597.1| peroxisomal biogenesis factor 2 [Neurospor... 337 7e-91
ref|XP_001212277.1| peroxisomal biogenesis factor 2 [Asperg... 336 1e-90
gb|ABH11413.1| peroxin 2 [Penicillium chrysogenum] 335 2e-90
ref|XP_645304.1| RING Zn finger-containing protein [Dictyos... 335 3e-90
ref|XP_380900.1| hypothetical protein FG00724.1 [Gibberella... 330 8e-89
ref|XP_519817.2| PREDICTED: peroxisomal membrane protein 3 ... 328 4e-88
ref|XP_001540740.1| peroxisomal biogenesis factor 2 [Ajello... 327 8e-88
ref|XP_001912471.1| unnamed protein product [Podospora anse... 326 1e-87
ref|XP_368589.1| hypothetical protein MGG_00655 [Magnaporth... 322 2e-86
ref|XP_001559557.1| hypothetical protein BC1G_01713 [Botryo... 318 4e-85
ref|XP_001593335.1| hypothetical protein SS1G_06257 [Sclero... 314 5e-84
gb|EDU43666.1| peroxisomal biogenesis factor 2 [Pyrenophora... 312 2e-83
ref|XP_820860.1| peroxin-2, putative [Trypanosoma cruzi str... 312 3e-83
gb|ACO64229.1| predicted protein [Micromonas sp. RCC299] 311 4e-83
gb|AAB48828.1| Gim1 [Leishmania donovani] 310 9e-83
ref|XP_684073.1| PREDICTED: similar to Peroxisome assembly ... 310 1e-82
ref|XP_001466263.1| glycosome import protein (gim1) [Leishm... 310 1e-82
gb|EAY97345.1| hypothetical protein OsI_018578 [Oryza sativ... 308 4e-82
ref|XP_001565685.1| glycosome import protein [Leishmania br... 307 6e-82
ref|XP_001837282.1| hypothetical protein CC1G_00418 [Coprin... 306 1e-81
ref|XP_001683984.1| glycosome import protein (gim1) [Leishm... 305 3e-81
emb|CAC59701.1| peroxin-2 [Trypanosoma brucei] 302 3e-80
ref|XP_843828.1| peroxin-2 [Trypanosoma brucei] >gi|6236026... 301 4e-80
emb|CAL56641.1| putative peroxisome assembly protein 2 (ISS... 301 6e-80
gb|ACF22776.1| ring finger protein [Brachypodium distachyon] 297 6e-79
ref|XP_504845.1| YlPEX2 [Yarrowia lipolytica] >gi|54041949|... 290 7e-77
ref|XP_001790759.1| hypothetical protein SNOG_00062 [Phaeos... 285 2e-75
gb|AAC49423.1| Pay5p 284 5e-75
ref|XP_001013694.1| Pex2 / Pex12 amino terminal region fami... 277 1e-72
emb|CAF97942.1| unnamed protein product [Tetraodon nigrovir... 273 1e-71
ref|XP_001202188.1| PREDICTED: similar to peroxisomal membr... 272 4e-71
ref|XP_001421023.1| predicted protein [Ostreococcus lucimar... 270 1e-70
ref|XP_457905.1| hypothetical protein DEHA0C05720g [Debaryo... 269 2e-70
ref|XP_714968.1| peroxisomal import RING finger complex com... 267 7e-70
ref|XP_001483143.1| hypothetical protein PGUG_05098 [Pichia... 265 4e-69
ref|XP_001245152.1| hypothetical protein CIMG_04593 [Coccid... 265 5e-69
ref|XP_001650927.1| peroxisomal membrane protein, putative ... 264 8e-69
ref|XP_001387892.2| peroxisome assembly protein (Peroxin-2)... 255 5e-66
ref|XP_001354095.1| GA20087-PA [Drosophila pseudoobscura] >... 253 1e-65
ref|XP_309872.4| AGAP010836-PA [Anopheles gambiae str. PEST... 253 1e-65
gb|AAL29060.2| LD46714p [Drosophila melanogaster] 252 3e-65
ref|NP_648210.1| CG7081 CG7081-PA [Drosophila melanogaster]... 249 2e-64
ref|XP_001846716.1| peroxisome assembly factor 1 [Culex pip... 247 6e-64
ref|XP_001876750.1| predicted protein [Laccaria bicolor S23... 246 2e-63
ref|XP_001732474.1| hypothetical protein MGL_0249 [Malassez... 242 3e-62
ref|XP_001528114.1| conserved hypothetical protein [Loddero... 238 4e-61
ref|XP_756472.1| hypothetical protein UM00325.1 [Ustilago m... 232 4e-59
gb|AAT97412.1| peroxin 2 [Pichia angusta] 229 2e-58
ref|XP_001089931.1| PREDICTED: similar to Peroxisome assemb... 222 3e-56
ref|XP_001605507.1| PREDICTED: similar to peroxisomal membr... 222 3e-56
sp|Q01964|PEX2_PICPA Peroxisomal biogenesis factor 2 (Perox... 221 5e-56
ref|XP_001670253.1| Hypothetical protein CBG06104 [Caenorha... 217 9e-55
ref|NP_502201.2| PeRoXisome assembly factor family member (... 215 5e-54
gb|EEH57229.1| predicted protein [Micromonas pusilla CCMP1545] 210 9e-53
ref|XP_566502.1| peroxisome assembly protein [Cryptococcus ... 203 1e-50
ref|XP_778153.1| hypothetical protein CNBA1530 [Cryptococcu... 203 2e-50
gb|AAQ04625.1|AF443186_1 peroxisome protein Pex2 [Paracocci... 178 5e-43
ref|XP_001625262.1| predicted protein [Nematostella vectens... 164 9e-39
ref|XP_447524.1| hypothetical protein CAGL0I06292g [Candida... 163 2e-38
ref|XP_001193457.1| PREDICTED: similar to Peroxisomal membr... 161 9e-38
gb|ABQ22826.1| peroxisome assembly factor 1-like protein [C... 160 2e-37
ref|XP_001519317.1| PREDICTED: similar to peroxisomal membr... 106 2e-21
ref|XP_001691622.1| predicted protein [Chlamydomonas reinha... 93 4e-17
ref|XP_001426969.1| hypothetical protein GSPATT00030205001 ... 65 9e-09
ref|XP_001426637.1| hypothetical protein GSPATT00029870001 ... 65 1e-08
Sequences not found previously or not previously below threshold:
ref|NP_982853.1| ABL094Wp [Ashbya gossypii ATCC 10895] >gi|... 134 9e-30
ref|NP_012325.1| RING-finger peroxin, peroxisomal membrane ... 110 1e-22
ref|XP_001646918.1| hypothetical protein Kpol_2000p24 [Vand... 110 2e-22
ref|XP_454701.1| unnamed protein product [Kluyveromyces lac... 81 1e-13
ref|XP_972155.1| PREDICTED: similar to CG7864-PA [Tribolium... 72 7e-11
ref|NP_010551.1| C3HC4-type RING-finger peroxisomal membran... 68 7e-10
gb|EDN60598.1| C3HC4 zinc-binding integral peroxisomal memb... 68 1e-09
gb|AAS56114.1| YDR265W [Saccharomyces cerevisiae] 66 3e-09
ref|XP_001644639.1| hypothetical protein Kpol_526p34 [Vande... 66 4e-09
ref|XP_001383970.2| hypothetical protein PICST_58365 [Pichi... 65 7e-09
ref|XP_449723.1| hypothetical protein CAGL0M08690g [Candida... 65 7e-09
ref|XP_453090.1| unnamed protein product [Kluyveromyces lac... 64 2e-08
dbj|BAD14903.1| peroxisomal membrane protein 3 [Gallus gallus] 64 2e-08
ref|XP_001237561.2| AGAP010497-PA [Anopheles gambiae str. P... 63 4e-08
ref|XP_001873307.1| predicted protein [Laccaria bicolor S23... 63 4e-08
ref|XP_001666372.1| hypothetical protein CBG21169 [Caenorha... 63 4e-08
sp|Q00940|PEX10_PICAN Peroxisome assembly protein 10 (Perox... 62 6e-08
ref|NP_985245.1| AER390Wp [Ashbya gossypii ATCC 10895] >gi|... 62 8e-08
ref|XP_001024158.1| Pex2 / Pex12 amino terminal region fami... 61 9e-08
emb|CAO02572.1| peroxisomal membrane protein [Kluyveromyces... 61 1e-07
ref|XP_447681.1| hypothetical protein CAGL0I09988g [Candida... 61 2e-07
ref|XP_001010127.2| zinc finger protein, putative [Tetrahym... 60 3e-07
emb|CAL53461.1| FOG: FHA domain (ISS) [Ostreococcus tauri] 59 3e-07
ref|XP_001347124.1| Peroxisome assembly protein, putative [... 59 5e-07
ref|XP_001873461.1| predicted protein [Laccaria bicolor S23... 59 6e-07
ref|XP_417558.2| PREDICTED: similar to peroxisome biogenesi... 58 1e-06
ref|NP_508904.2| C26B9.6 [Caenorhabditis elegans] >gi|34366... 58 2e-06
ref|XP_001633055.1| predicted protein [Nematostella vectens... 57 2e-06
ref|XP_001667669.1| Hypothetical protein CBG22172 [Caenorha... 57 2e-06
ref|XP_001353650.1| GA20642-PA [Drosophila pseudoobscura] >... 56 3e-06
ref|XP_001418208.1| predicted protein [Ostreococcus lucimar... 56 4e-06
ref|NP_594437.1| ubiquitin-protein ligase E3 (predicted) [S... 56 6e-06
ref|XP_644602.1| MEK1 interacting protein 1 [Dictyostelium ... 55 1e-05
gb|AAM21558.1|AF446007_1 MEK1 interacting protein 1 [Dictyo... 54 1e-05
ref|XP_309110.3| AGAP000928-PA [Anopheles gambiae str. PEST... 54 1e-05
ref|XP_001456618.1| hypothetical protein GSPATT00022392001 ... 54 1e-05
gb|AAF87890.1|AC012561_23 Similar tp transcription factors ... 54 1e-05
gb|AAD50036.1|AC007980_1 Similar to transcription factors [... 54 1e-05
ref|NP_564568.1| SNF2 domain-containing protein / helicase ... 54 1e-05
ref|XP_001382813.2| hypothetical protein PICST_42357 [Pichi... 54 2e-05
ref|XP_700683.2| PREDICTED: hypothetical protein [Danio rerio] 53 2e-05
ref|XP_001453882.1| hypothetical protein GSPATT00020168001 ... 53 3e-05
emb|CAG46874.1| PEX10 [Homo sapiens] >gi|60822939|gb|AAX366... 53 3e-05
ref|XP_460760.1| hypothetical protein DEHA0F10087g [Debaryo... 53 4e-05
ref|XP_001704766.1| Zinc finger domain [Giardia lamblia ATC... 53 4e-05
ref|XP_001356739.1| GA17579-PA [Drosophila pseudoobscura] >... 53 4e-05
ref|XP_001829342.1| hypothetical protein CC1G_00521 [Coprin... 53 5e-05
ref|NP_188635.1| SNF2 domain-containing protein / helicase ... 53 5e-05
ref|NP_002608.1| peroxisome biogenesis factor 10 isoform 2 ... 53 5e-05
sp|Q92265|PEX10_PICPA Peroxisome assembly protein 10 (Perox... 53 5e-05
ref|XP_001345325.1| PREDICTED: similar to bloodthirsty [Dan... 52 5e-05
emb|CAG10910.1| unnamed protein product [Tetraodon nigrovir... 52 5e-05
ref|XP_426628.2| PREDICTED: similar to constitutive photomo... 52 6e-05
ref|YP_053107.1| ubiquitin E3 ligase ICP0 [Equid herpesviru... 52 6e-05
dbj|BAD91096.1| transcriptional activator [Equid herpesviru... 52 6e-05
emb|CAO65958.1| unnamed protein product [Vitis vinifera] 52 6e-05
ref|XP_974586.1| PREDICTED: similar to constitutive photomo... 52 6e-05
dbj|BAD91106.1| transcriptional activator [Equid herpesviru... 52 6e-05
dbj|BAD27395.1| transactivator protein [Equid herpesvirus 1] 52 6e-05
gb|AAB63316.1| contains a deletion of 399 base pairs as com... 52 6e-05
dbj|BAD91102.1| transcriptional activator [Equid herpesviru... 52 6e-05
dbj|BAD91104.1| transcriptional activator [Equid herpesviru... 52 6e-05
dbj|BAD91098.1| transcriptional activator [Equid herpesviru... 52 6e-05
ref|NP_001083011.1| hypothetical protein LOC100037391 [Dani... 52 6e-05
gb|ABM85844.1| tripartite motif-containing 38 [synthetic co... 52 7e-05
gb|EAY86041.1| hypothetical protein OsI_007274 [Oryza sativ... 52 7e-05
ref|NP_001005315.1| hypothetical protein LOC368754 [Danio r... 52 7e-05
ref|NP_001046958.1| Os02g0516600 [Oryza sativa (japonica cu... 52 7e-05
gb|EAZ23220.1| hypothetical protein OsJ_006703 [Oryza sativ... 52 7e-05
gb|AAH26930.1| Tripartite motif-containing 38 [Homo sapiens... 52 7e-05
ref|XP_697907.2| PREDICTED: similar to constitutive photomo... 52 7e-05
ref|XP_001844371.1| E3 ubiquitin-ligase protein COP1 [Culex... 52 7e-05
ref|NP_505917.2| C55A6.1 [Caenorhabditis elegans] >gi|58081... 52 7e-05
ref|XP_001310832.1| hypothetical protein TVAG_059670 [Trich... 52 8e-05
ref|XP_001306653.1| hypothetical protein TVAG_354620 [Trich... 52 8e-05
gb|EAZ40837.1| hypothetical protein OsJ_024320 [Oryza sativ... 52 8e-05
ref|NP_001060436.1| Os07g0642400 [Oryza sativa (japonica cu... 51 9e-05
gb|EAZ04883.1| hypothetical protein OsI_026115 [Oryza sativ... 51 9e-05
ref|NP_045280.1| ubiquitin E3 ligase ICP0 [Equid herpesviru... 51 9e-05
ref|XP_001643793.1| hypothetical protein Kpol_480p22 [Vande... 51 9e-05
ref|XP_504805.1| hypothetical protein [Yarrowia lipolytica]... 51 9e-05
ref|XP_001564910.1| hypothetical protein LbrM21_V2.2090 [Le... 51 9e-05
ref|XP_758770.1| hypothetical protein UM02623.1 [Ustilago m... 51 1e-04
emb|CAF91134.1| unnamed protein product [Tetraodon nigrovir... 51 1e-04
gb|AAI61699.1| Unknown (protein for IMAGE:5537244) [Xenopus... 51 1e-04
ref|XP_001332118.1| PREDICTED: similar to constitutive phot... 51 1e-04
ref|NP_001016199.1| ring finger and WD repeat domain 2 [Xen... 51 1e-04
ref|NP_986450.1| AGL217Wp [Ashbya gossypii ATCC 10895] >gi|... 51 1e-04
ref|XP_772319.1| hypothetical protein CNBL1870 [Cryptococcu... 51 1e-04
ref|XP_499880.1| hypothetical protein [Yarrowia lipolytica]... 51 1e-04
ref|XP_687960.2| PREDICTED: similar to bloodthirsty [Danio ... 51 1e-04
gb|AAH65891.1| LOC402959 protein [Danio rerio] 51 1e-04
ref|XP_001172491.1| PREDICTED: tripartite motif-containing ... 51 1e-04
ref|NP_006346.1| tripartite motif-containing 38 [Homo sapie... 51 1e-04
ref|XP_527251.1| PREDICTED: tripartite motif-containing 38 ... 51 1e-04
ref|XP_513729.2| PREDICTED: peroxisome biogenesis factor 10... 51 1e-04
emb|CAN88303.1| novel protein similar to bloodthirsty (bty)... 51 2e-04
dbj|BAB02751.1| unnamed protein product [Arabidopsis thaliana] 51 2e-04
ref|XP_001366320.1| PREDICTED: similar to Peroxisome biogen... 51 2e-04
ref|XP_001753592.1| predicted protein [Physcomitrella paten... 51 2e-04
ref|NP_188282.1| SNF2 domain-containing protein / helicase ... 51 2e-04
ref|XP_001373596.1| PREDICTED: similar to constitutive phot... 51 2e-04
ref|XP_001294741.1| hypothetical protein TVAG_257890 [Trich... 51 2e-04
gb|AAH20845.1| RFWD2 protein [Homo sapiens] 51 2e-04
ref|XP_993328.1| PREDICTED: similar to constitutive photomo... 51 2e-04
ref|XP_001104719.1| PREDICTED: similar to ring finger and W... 51 2e-04
ref|XP_001104796.1| PREDICTED: similar to ring finger and W... 51 2e-04
ref|XP_001120054.1| PREDICTED: similar to CG7864-PA [Apis m... 50 2e-04
gb|ABF21707.1| ring-finger protein [Human herpesvirus 3] 50 2e-04
ref|NP_001001740.1| ring finger and WD repeat domain 2 isof... 50 2e-04
ref|NP_036061.1| ring finger and WD repeat domain 2 [Mus mu... 50 2e-04
emb|CAE45973.1| hypothetical protein [Homo sapiens] 50 2e-04
ref|XP_001479473.1| PREDICTED: similar to constitutive phot... 50 2e-04
ref|NP_071902.2| ring finger and WD repeat domain 2 isoform... 50 2e-04
ref|XP_001153038.1| PREDICTED: ring finger and WD repeat do... 50 2e-04
gb|EAW55503.1| tripartite motif-containing 38, isoform CRA_... 50 2e-04
gb|AAI58003.1| Ring finger and WD repeat domain 2 [Mus musc... 50 2e-04
ref|XP_001606231.1| PREDICTED: similar to conserved hypothe... 50 2e-04
gb|EAZ42729.1| hypothetical protein OsJ_026212 [Oryza sativ... 50 2e-04
pdb|1CHC|A Chain A, Structure Of The C3hc4 Domain By 1h-Nuc... 50 2e-04
gb|EAW55506.1| tripartite motif-containing 38, isoform CRA_... 50 2e-04
ref|XP_001306975.1| hypothetical protein TVAG_150920 [Trich... 50 2e-04
gb|ABF21853.1| ring-finger protein [Human herpesvirus 3] 50 2e-04
ref|NP_040183.1| ubiquitin E3 ligase ICP0 [Human herpesviru... 50 2e-04
emb|CAB63935.1| putative acid finger protein [Sus scrofa] 50 2e-04
ref|NP_740943.1| Y105E8A.14 [Caenorhabditis elegans] 50 2e-04
emb|CAD21663.2| Hypothetical protein Y105E8A.14 [Caenorhabd... 50 2e-04
gb|EDM09451.1| similar to constitutive photomorphogenic pro... 50 2e-04
ref|XP_503872.1| hypothetical protein [Yarrowia lipolytica]... 50 2e-04
ref|XP_537792.2| PREDICTED: similar to TNF receptor-associa... 50 2e-04
ref|XP_001342317.1| PREDICTED: similar to bloodthirsty [Dan... 50 2e-04
ref|XP_001375238.1| PREDICTED: hypothetical protein [Monode... 50 3e-04
ref|XP_857114.1| PREDICTED: similar to TNF receptor-associa... 50 3e-04
ref|XP_857289.1| PREDICTED: similar to TNF receptor-associa... 50 3e-04
ref|XP_001679591.1| Hypothetical protein CBG02634 [Caenorha... 50 3e-04
ref|XP_317518.4| AGAP007954-PA [Anopheles gambiae str. PEST... 50 3e-04
ref|XP_001083397.1| PREDICTED: tripartite motif-containing ... 50 3e-04
gb|EAW90999.1| ring finger and WD repeat domain 2, isoform ... 50 3e-04
ref|XP_646455.1| hypothetical protein DDBDRAFT_0190725 [Dic... 50 3e-04
ref|XP_001083266.1| PREDICTED: tripartite motif-containing ... 50 3e-04
ref|XP_001084130.1| PREDICTED: peroxisome biogenesis factor... 50 3e-04
ref|XP_857202.1| PREDICTED: similar to TNF receptor-associa... 50 3e-04
ref|XP_001463446.1| hypothetical protein, conserved [Leishm... 50 3e-04
ref|XP_537181.2| PREDICTED: similar to constitutive photomo... 50 3e-04
gb|ABG78603.1| RING-1 [Gibberella zeae] 50 3e-04
ref|XP_846369.1| hypothetical protein, conserved [Trypanoso... 50 3e-04
emb|CAK04915.1| novel protein similar to TNF receptor-assoc... 50 3e-04
ref|XP_415653.2| PREDICTED: similar to tripartite motif-con... 50 3e-04
ref|NP_189307.2| zinc finger (C3HC4-type RING finger) famil... 50 3e-04
emb|CAA66822.1| hypothetical protein [Arabidopsis thaliana] 50 3e-04
ref|XP_595840.3| PREDICTED: similar to tripartite motif pro... 50 3e-04
ref|NP_001035434.1| hypothetical protein LOC678596 [Danio r... 49 3e-04
ref|XP_001897248.1| RING zinc finger protein [Brugia malayi... 49 3e-04
gb|AAH91694.1| Trim47_predicted protein [Rattus norvegicus] 49 3e-04
ref|XP_001073650.1| PREDICTED: similar to Tripartite motif ... 49 3e-04
ref|XP_001347402.1| hypothetical protein PF10_0117 [Plasmod... 49 3e-04
ref|XP_001098758.1| PREDICTED: tripartite motif-containing ... 49 4e-04
ref|NP_001009176.1| tripartite motif protein 10 [Rattus nor... 49 4e-04
ref|NP_666189.1| tripartite motif-containing 31 [Mus muscul... 49 4e-04
ref|NP_035410.1| tripartite motif-containing 10 [Mus muscul... 49 4e-04
gb|AAH51632.1| Tripartite motif protein 10 [Mus musculus] 49 4e-04
sp|Q9WUH5|TRI10_MOUSE Tripartite motif-containing protein 1... 49 4e-04
gb|EDM09450.1| similar to constitutive photomorphogenic pro... 49 4e-04
ref|XP_971880.1| PREDICTED: similar to ring finger protein ... 49 4e-04
ref|NP_001061801.1| Os08g0414200 [Oryza sativa (japonica cu... 49 4e-04
ref|XP_692341.2| PREDICTED: hypothetical protein [Danio rerio] 49 4e-04
tpg|DAA02480.1| TPA_inf: HDC06237 [Drosophila melanogaster] 49 4e-04
ref|XP_001326964.1| hypothetical protein TVAG_038490 [Trich... 49 4e-04
ref|XP_387254.1| hypothetical protein FG07078.1 [Gibberella... 49 4e-04
sp|Q01961|PEX12_PICPA Peroxisome assembly protein 12 (Perox... 49 5e-04
ref|XP_545467.2| PREDICTED: similar to Tripartite motif pro... 49 5e-04
gb|EEH53643.1| predicted protein [Micromonas pusilla CCMP1545] 49 5e-04
emb|CAL57352.1| Predicted E3 ubiquitin ligase (ISS) [Ostreo... 49 5e-04
ref|XP_001631481.1| predicted protein [Nematostella vectens... 49 5e-04
ref|NP_014587.1| Nuclear protein, putative RNA polymerase I... 49 5e-04
gb|EDN63821.1| pob3/spt16 histone associated protein [Sacch... 49 5e-04
sp|Q8HXW8|PEX10_MACFA Peroxisome assembly protein 10 (Perox... 49 5e-04
ref|NP_647624.1| CG7864 CG7864-PA [Drosophila melanogaster]... 49 5e-04
ref|XP_001382790.2| ATPase/DNA helicase [Pichia stipitis CB... 49 6e-04
ref|XP_001681151.1| hypothetical protein, conserved [Leishm... 49 6e-04
ref|XP_729566.1| hypothetical protein PY01765 [Plasmodium y... 49 6e-04
ref|XP_742324.1| hypothetical protein PC000295.05.0 [Plasmo... 49 6e-04
ref|XP_001350464.1| hypothetical protein PFL0275w [Plasmodi... 49 6e-04
ref|NP_001028947.1| hypothetical protein LOC432613 [Mus mus... 49 6e-04
ref|XP_001341875.1| PREDICTED: similar to bloodthirsty [Dan... 49 6e-04
ref|XP_001435534.1| hypothetical protein GSPATT00036920001 ... 49 6e-04
gb|EDL34491.1| mCG132745 [Mus musculus] 49 6e-04
ref|NP_001061138.1| Os08g0180300 [Oryza sativa (japonica cu... 49 7e-04
gb|EAZ05810.1| hypothetical protein OsI_027042 [Oryza sativ... 49 7e-04
gb|ACO14578.1| RING finger protein 146 [Caligus clemensi] 49 7e-04
dbj|BAA95211.1| infected cell protein 0 [Canid herpesvirus 1] 49 7e-04
ref|XP_001497958.1| PREDICTED: similar to TNF receptor-asso... 49 7e-04
sp|Q5XIK5|RN146_RAT RING finger protein 146 >gi|53734234|gb... 49 7e-04
ref|NP_080794.2| ring finger protein 146 [Mus musculus] >gi... 49 7e-04
dbj|BAE31549.1| unnamed protein product [Mus musculus] >gi|... 49 7e-04
ref|XP_533493.2| PREDICTED: similar to ring finger protein ... 49 7e-04
ref|XP_001026980.1| DNA repair helicase (rad3) [Tetrahymena... 49 7e-04
ref|NP_001012060.2| ring finger protein 146 [Rattus norvegi... 49 7e-04
ref|XP_001369720.1| PREDICTED: similar to ring finger prote... 49 7e-04
gb|EDL04840.1| ring finger protein 146, isoform CRA_b [Mus ... 49 7e-04
gb|EDL87696.1| rCG42109, isoform CRA_a [Rattus norvegicus] ... 49 7e-04
>ref|NP_565222.1| TED3 (REVERSAL OF THE DET PHENOTYPE); protein binding / zinc ion
binding [Arabidopsis thaliana]
sp|Q9CA86|PEX2_ARATH Peroxisome assembly protein 2 (Peroxin-2) (AthPEX2) (Pex2p)
gb|AAG52254.1|AC011717_22 putative RING finger protein; 84236-82024 [Arabidopsis thaliana]
gb|AAL36419.1| unknown protein [Arabidopsis thaliana]
gb|AAM20014.1| unknown protein [Arabidopsis thaliana]
Length = 333
Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats.
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL
Sbjct: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
Query: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG
Sbjct: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
Query: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR
Sbjct: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
Query: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS
Sbjct: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
Query: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY 300
EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY
Sbjct: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY 300
Query: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
>gb|AAM61388.1| putative RING finger protein [Arabidopsis thaliana]
Length = 333
Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats.
Identities = 332/333 (99%), Positives = 332/333 (99%)
Query: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL
Sbjct: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
Query: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG
Sbjct: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
Query: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR
Sbjct: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
Query: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS
Sbjct: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
Query: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY 300
EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIP IALPCQHRYCYY
Sbjct: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPXIALPCQHRYCYY 300
Query: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
>gb|AAF68113.1|AC010793_8 F20B17.23 [Arabidopsis thaliana]
Length = 389
Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats.
Identities = 324/392 (82%), Positives = 326/392 (83%), Gaps = 62/392 (15%)
Query: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL
Sbjct: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
Query: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG
Sbjct: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
Query: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
K GLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR
Sbjct: 121 K---GLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 177
Query: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEF- 239
IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEF
Sbjct: 178 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 237
Query: 240 ------------------------SEMLLLL----LPLL--------------NSSAVKN 257
S+ L+L L L NSSAVKN
Sbjct: 238 VGLLYPSIDQNILFRLATRNVMLGSDFLVLFWHSALNLFGDIQEMLLLLLPLLNSSAVKN 297
Query: 258 ILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQH----------------RYCYYC 301
ILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQH RYCYYC
Sbjct: 298 ILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHSMCCSCYIHLKELTCRRYCYYC 357
Query: 302 IRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
IRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 358 IRTRCASAASFRCLRCNEPVVAIQREGVSSGK 389
>emb|CAO45868.1| unnamed protein product [Vitis vinifera]
Length = 346
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 248/319 (77%), Positives = 287/319 (89%), Gaps = 2/319 (0%)
Query: 8 DDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLM 67
+DAW+ +YQRL P+ QS S++S IPV+ISRVNQ DAARLD+E+SAMLKEQLVKVF+LM
Sbjct: 18 EDAWVHTYQRLQPQWQSFSLSQQSTIPVSISRVNQVDAARLDIEISAMLKEQLVKVFSLM 77
Query: 68 KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLE 127
KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGN LMNLRYRDER + GKVRTGLE
Sbjct: 78 KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNGLMNLRYRDERTMEL--RGKVRTGLE 135
Query: 128 GPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKA 187
GPGLT QKIWYCVA+VGGQY+++RLQSFSAFRRWGDSEQR +ARR W ++QRIEG+YKA
Sbjct: 136 GPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRSVARRAWIMIQRIEGLYKA 195
Query: 188 ASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLL 247
ASF NLL FL+TGRYRNLIE+AL+ARLVY SP+MNR+VSFEYMNRQLVWNEFSEMLLLLL
Sbjct: 196 ASFSNLLIFLFTGRYRNLIERALQARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLL 255
Query: 248 PLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCA 307
PLLNSS+++N L PF+K+KSSS++ D CPICQ P IPF+ALPC+HRYCYYC+RTRCA
Sbjct: 256 PLLNSSSIRNFLRPFSKNKSSSSEGDETACPICQASPTIPFLALPCEHRYCYYCLRTRCA 315
Query: 308 SAASFRCLRCNEPVVAIQR 326
+A+SFRC+RC+EPVVA+QR
Sbjct: 316 AASSFRCIRCSEPVVAMQR 334
>ref|NP_001055075.1| Os05g0275700 [Oryza sativa (japonica cultivar-group)]
gb|AAT85132.1| putative peroxisome assembly protein 2 [Oryza sativa (japonica
cultivar-group)]
dbj|BAF16989.1| Os05g0275700 [Oryza sativa (japonica cultivar-group)]
Length = 342
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 237/322 (73%), Positives = 275/322 (85%), Gaps = 1/322 (0%)
Query: 9 DAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK 68
DAW Y+RLLP+ +S+ S + IP++ISRVNQFDAARLDVEMSAMLKEQLVKVF+L+K
Sbjct: 22 DAWAAEYRRLLPQWESMRDSSKIAIPISISRVNQFDAARLDVEMSAMLKEQLVKVFSLVK 81
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEG 128
PG+LFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDER +VRTGLEG
Sbjct: 82 PGLLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAA-PITGKEVRTGLEG 140
Query: 129 PGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAA 188
PGL+ QK+ YC+++VGGQY++SRLQSFSAFRRWGDSEQRPLARR W LVQ EG+Y+A+
Sbjct: 141 PGLSVSQKVLYCISTVGGQYIWSRLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRAS 200
Query: 189 SFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLP 248
SF NLL FLY RY+ ++E+ LKARLVY SP+MNR+VSFEYMNRQLVWNEFSEMLLLLLP
Sbjct: 201 SFFNLLLFLYGARYKTIVERILKARLVYESPNMNRAVSFEYMNRQLVWNEFSEMLLLLLP 260
Query: 249 LLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCAS 308
LLNSS+VK L PF+KDKS+S+ D CPIC+ P+IPF ALPCQHRYCYYC++TRCA+
Sbjct: 261 LLNSSSVKKFLLPFSKDKSASSSGDEADCPICRSSPSIPFEALPCQHRYCYYCLQTRCAA 320
Query: 309 AASFRCLRCNEPVVAIQREGVS 330
S+RC RCNE VVAIQR+G S
Sbjct: 321 TNSYRCARCNEIVVAIQRQGSS 342
>ref|NP_974183.1| TED3 (REVERSAL OF THE DET PHENOTYPE); protein binding / zinc ion
binding [Arabidopsis thaliana]
Length = 282
Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats.
Identities = 282/282 (100%), Positives = 282/282 (100%)
Query: 52 MSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDE 111
MSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDE
Sbjct: 1 MSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDE 60
Query: 112 RGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLA 171
RGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLA
Sbjct: 61 RGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLA 120
Query: 172 RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMN 231
RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMN
Sbjct: 121 RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMN 180
Query: 232 RQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIAL 291
RQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIAL
Sbjct: 181 RQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIAL 240
Query: 292 PCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
PCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 241 PCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 282
>ref|XP_001781834.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ53388.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 356
Score = 387 bits (994), Expect = e-106, Method: Composition-based stats.
Identities = 185/329 (56%), Positives = 244/329 (74%), Gaps = 7/329 (2%)
Query: 9 DAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK 68
DAW+++++ + P+ + + A ++V V I RVNQ DAARLDVEM+ MLKEQL +VF+L +
Sbjct: 18 DAWLQAWRAIAPQWEQIRAKVKTVPDVPILRVNQIDAARLDVEMTGMLKEQLSRVFSLSQ 77
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVV--AQHLGKVRTGL 126
PG+L +YEPEL+AFLEFL+WRFSIWVDKPTPGNALMNLRYR+ER + VRTGL
Sbjct: 78 PGLLLRYEPELNAFLEFLVWRFSIWVDKPTPGNALMNLRYRNERSFNTYLKFGKAVRTGL 137
Query: 127 EGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYK 186
EG GLT QKI YC+ VGG+Y ++RLQ SAF+RWGD ++ ARR W L+Q+ E +YK
Sbjct: 138 EGAGLTKTQKILYCLLVVGGRYAWARLQLISAFQRWGDRQRTSWARRAWLLLQKAESLYK 197
Query: 187 AASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLL 246
A F NL+ FL++GRY + +E+ L ARLVY P MNR+VSFEYMNRQLVW+EFSE+LLL+
Sbjct: 198 IAGFANLVLFLHSGRYPSTVERLLGARLVYEKPDMNRAVSFEYMNRQLVWHEFSELLLLI 257
Query: 247 LPLLNSSAVKN-ILSPFAK-DKSSSTKEDTVTCPICQVDPAI-PFIALPCQHRYCYYCIR 303
LPLLN +++ ++ PF+ +SS ED CPIC+ P + P++ALPC H YCYYC+R
Sbjct: 258 LPLLNMMSIRKVLMFPFSTQAPASSLPED--ACPICEACPIVTPYMALPCCHLYCYYCLR 315
Query: 304 TRCASAASFRCLRCNEPVVAIQREGVSSG 332
TR S + +C RC+ VVA++R V +G
Sbjct: 316 TRSLSDRNLKCSRCSVSVVALKRYQVEAG 344
>ref|XP_001490672.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Equus caballus]
Length = 305
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 152/308 (49%), Gaps = 25/308 (8%)
Query: 26 LASRRS--VIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MASREEGTKRTSRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + QK+WY V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDFSPNP----------RYQPPSRNQKLWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + R+ V + GI K +N L FL G++
Sbjct: 111 IGGKWLEER--CYDLFR----NPHLASFRKAKQCVNFVVGILKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L R V+ P R V FEYMNR+++W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIRSVFCKPQNIREVGFEYMNREILWHGFAEFLIFLLPLINIQKLKAKLSSWC 224
Query: 264 KDKSSSTKED------TVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CYYC+++ F C +C
Sbjct: 225 IPLTGAPNGDSTLATSGRQCSLCGEWPTMPH-TIGCEHIFCYYCVKSSFLYDMYFTCPKC 283
Query: 318 NEPVVAIQ 325
V ++Q
Sbjct: 284 GTEVHSLQ 291
>ref|NP_000309.1| peroxin 2 [Homo sapiens]
ref|NP_001073336.1| peroxin 2 [Homo sapiens]
sp|P28328|PEX2_HUMAN Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3) (35 kDa peroxisomal membrane
protein) (RING finger protein 72)
gb|AAF97687.1|AF133826_1 35 kDa peroxisomal membrane protein [Homo sapiens]
gb|AAC12785.1| peroxisome assembly factor-1 [Homo sapiens]
gb|AAA60141.1| peroxisomal membrane protein
gb|AAH05375.1| Peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
gb|AAH93043.1| Peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
Length = 305
Score = 368 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 151/308 (49%), Gaps = 25/308 (8%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKNDFS----------PNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFR----NHHLASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQ 325
V ++Q
Sbjct: 284 GTEVHSLQ 291
>gb|ABZ92521.1| peroxisomal membrane protein 3, 35kDa (Zellweger syndrome)
[synthetic construct]
Length = 305
Score = 367 bits (943), Expect = e-100, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 151/308 (49%), Gaps = 25/308 (8%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKNDFS----------PNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFR----NHHLASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQ 325
V ++Q
Sbjct: 284 GTEVHSLQ 291
>dbj|BAE27238.1| unnamed protein product [Mus musculus]
Length = 305
Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats.
Identities = 89/310 (28%), Positives = 153/310 (49%), Gaps = 28/310 (9%)
Query: 25 LLASRRSVIPV-AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ ++ + R++Q DA LD + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MTGKEENMQSANRVLRISQLDALELDKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + + + QK+WY V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDSSLNLIYQ----------PPSKTQKLWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+GG++L R + FR R LA + + + G+ K +N L FL G+
Sbjct: 111 IGGKWLEER--CYDLFR------NRHLASFGKAKQFMNFLVGLLKLGELINFLIFLQKGK 162
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
+ L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS
Sbjct: 163 FATLTERLLGIHSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSS 222
Query: 262 FAKDKS------SSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCL 315
+ + S+ C +C P +P + C+H +CYYC+++ F C
Sbjct: 223 WCIPLTGAAGHDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCP 281
Query: 316 RCNEPVVAIQ 325
+C V ++Q
Sbjct: 282 KCGTEVHSVQ 291
>gb|AAH00661.1| Peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
Length = 305
Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 151/308 (49%), Gaps = 25/308 (8%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKNDFS----------PNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFR----NHHLASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGERPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQ 325
V ++Q
Sbjct: 284 GTEVHSLQ 291
>gb|EDL05216.1| peroxisomal membrane protein 3, isoform CRA_b [Mus musculus]
Length = 307
Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats.
Identities = 88/310 (28%), Positives = 153/310 (49%), Gaps = 28/310 (9%)
Query: 25 LLASRRSVIPV-AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ ++ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 3 MTGKEENMQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 62
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + + + QK+WY V +
Sbjct: 63 WLFLWRFTIYSKNATVGQSVLNIQYKNDSSLNLIYQ----------PPSKTQKLWYAVCT 112
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+GG++L R + FR R LA + + + G+ K +N L FL G+
Sbjct: 113 IGGKWLEER--CYDLFR------NRHLASFGKAKQFMNFLVGLLKLGELINFLIFLQKGK 164
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
+ L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS
Sbjct: 165 FATLTERLLGIHSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSS 224
Query: 262 FAKDKS------SSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCL 315
+ + S+ C +C P +P + C+H +CYYC+++ F C
Sbjct: 225 WCIPLTGAAGHDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCP 283
Query: 316 RCNEPVVAIQ 325
+C V ++Q
Sbjct: 284 KCGTEVHSVQ 293
>ref|NP_033020.2| peroxin 2 [Mus musculus]
gb|AAB91465.1| peroxisome membrane protein PEX2 [Mus musculus]
gb|AAH12404.1| Peroxisomal membrane protein 3 [Mus musculus]
dbj|BAE30130.1| unnamed protein product [Mus musculus]
dbj|BAE31130.1| unnamed protein product [Mus musculus]
gb|EDL05215.1| peroxisomal membrane protein 3, isoform CRA_a [Mus musculus]
Length = 305
Score = 364 bits (935), Expect = 6e-99, Method: Composition-based stats.
Identities = 88/310 (28%), Positives = 153/310 (49%), Gaps = 28/310 (9%)
Query: 25 LLASRRSVIPV-AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ ++ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MTGKEENMQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + + + QK+WY V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDSSLNLIYQ----------PPSKTQKLWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+GG++L R + FR R LA + + + G+ K +N L FL G+
Sbjct: 111 IGGKWLEER--CYDLFR------NRHLASFGKAKQFMNFLVGLLKLGELINFLIFLQKGK 162
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
+ L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS
Sbjct: 163 FATLTERLLGIHSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSS 222
Query: 262 FAKDKS------SSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCL 315
+ + S+ C +C P +P + C+H +CYYC+++ F C
Sbjct: 223 WCIPLTGAAGHDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCP 281
Query: 316 RCNEPVVAIQ 325
+C V ++Q
Sbjct: 282 KCGTEVHSVQ 291
>ref|NP_058930.1| peroxin 2 [Rattus norvegicus]
dbj|BAA06307.1| peroxisome assembly factor-1 [Rattus norvegicus]
Length = 305
Score = 364 bits (934), Expect = 6e-99, Method: Composition-based stats.
Identities = 89/310 (28%), Positives = 153/310 (49%), Gaps = 29/310 (9%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+A+R + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MAAREESTQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + + QK+ Y V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDSSPNPVYQ----------PPSKNQKLLYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+GG++L R + F R LA + + + G+ K +N L FL G+
Sbjct: 111 IGGRWLEER--CYDLF------PNRHLASFGKAKQCMNFVVGLLKLGELMNFLIFLQKGK 162
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
+ L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS
Sbjct: 163 FATLTERLLGIHSVFCKPQSMREVGFEYMNRELLWHGFAEFLVFLLPLINIQKLKAKLSS 222
Query: 262 FAKDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCL 315
+ +S+ D+ C +C P +P + C+H +CYYC+++ F C
Sbjct: 223 WCIPLTSTAGSDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDMYFTCP 281
Query: 316 RCNEPVVAIQ 325
+C V ++Q
Sbjct: 282 KCGTEVHSVQ 291
>sp|P24392|PEX2_RAT Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3)
emb|CAA41054.1| peroxisome assembly factor-1 [Rattus rattus]
dbj|BAA06306.1| peroxisome assembly factor-1 [Rattus norvegicus]
gb|AAH63169.1| Peroxisomal membrane protein 3 [Rattus norvegicus]
gb|EDM01038.1| peroxisomal membrane protein 3, isoform CRA_a [Rattus norvegicus]
gb|EDM01039.1| peroxisomal membrane protein 3, isoform CRA_a [Rattus norvegicus]
gb|EDM01040.1| peroxisomal membrane protein 3, isoform CRA_a [Rattus norvegicus]
prf||1706355A peroxisome assembly factor 1
Length = 305
Score = 364 bits (934), Expect = 6e-99, Method: Composition-based stats.
Identities = 90/310 (29%), Positives = 154/310 (49%), Gaps = 29/310 (9%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+A+R + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MAAREESTQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + + QK+ Y V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDSSPNPVYQ----------PPSKNQKLLYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+GG++L R + FR R LA + + + G+ K +N L FL G+
Sbjct: 111 IGGRWLEER--CYDLFR------NRHLASFGKAKQCMNFVVGLLKLGELMNFLIFLQKGK 162
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
+ L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS
Sbjct: 163 FATLTERLLGIHSVFCKPQSMREVGFEYMNRELLWHGFAEFLVFLLPLINIQKLKAKLSS 222
Query: 262 FAKDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCL 315
+ +S+ D+ C +C P +P + C+H +CYYC+++ F C
Sbjct: 223 WCIPLTSTAGSDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDMYFTCP 281
Query: 316 RCNEPVVAIQ 325
+C V ++Q
Sbjct: 282 KCGTEVHSVQ 291
>gb|EAW87052.1| peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
Length = 305
Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats.
Identities = 88/308 (28%), Positives = 150/308 (48%), Gaps = 25/308 (8%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKNDFS----------PNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFR----NHHLASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNICEVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQ 325
V ++Q
Sbjct: 284 GTEVHSLQ 291
>ref|XP_001377812.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Monodelphis domestica]
Length = 305
Score = 360 bits (925), Expect = 8e-98, Method: Composition-based stats.
Identities = 90/295 (30%), Positives = 146/295 (49%), Gaps = 23/295 (7%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q F KPG+L + EPE+ AFL +WRF+I+
Sbjct: 14 VLRISQLDALELNKALEQLVWSQFTHCFHGFKPGLLARLEPEVKAFLWLFLWRFTIYSKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G ++MN++Y++ + L+ QK+WY + +VGG++L R +
Sbjct: 74 ATVGQSIMNIQYKNNYS----------QTQKYQPLSKNQKLWYAICTVGGRWLEER--CY 121
Query: 157 SAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVY 216
FR + ++ I G+ K +S +N L FL G++ L E+ L R V+
Sbjct: 122 DLFR----NHHLASFYKIKQCTNLIVGLLKLSSLVNFLIFLQKGKFATLTERLLGIRSVF 177
Query: 217 RSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKED--- 273
P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS + + D
Sbjct: 178 CKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCIPFTGVPNSDVTL 237
Query: 274 ---TVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
C +C P +P + C H +CYYC+++ F C +C V+ +Q
Sbjct: 238 ATHGKECSLCGEWPTMPH-TIGCVHVFCYYCVKSSYLFDMYFTCPKCGTEVLNLQ 291
>ref|XP_544136.2| PREDICTED: similar to Peroxisome assembly factor-1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Canis familiaris]
Length = 305
Score = 359 bits (923), Expect = 1e-97, Method: Composition-based stats.
Identities = 93/310 (30%), Positives = 151/310 (48%), Gaps = 29/310 (9%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR + R++Q DA L+ + ++ Q + F KPG+L +EPE+ A L
Sbjct: 1 MASREEKTKRTDRVLRISQLDALELNKALEQLVWAQFTQCFHGFKPGLLAHFEPEVKALL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QK+WY V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDFS----------PKLRYQPPSKNQKLWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+GG +L R + FR R LA + V + G+ K +N L FL G+
Sbjct: 111 IGGTWLEER--CYDLFR------NRHLASFGKARQCVNIMVGLLKLGGLINFLIFLQRGK 162
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
+ L E+ L R V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS
Sbjct: 163 FATLTERLLGIRSVFCKPQNVREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSS 222
Query: 262 FAKDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCL 315
+ + + D C +C P +P + C+H +CYYC+++ F C
Sbjct: 223 WCIPLTGAPTSDNTLATSGKQCSLCGEWPTMPH-TIGCEHIFCYYCVKSSFLFDMYFTCP 281
Query: 316 RCNEPVVAIQ 325
+C V ++Q
Sbjct: 282 KCGTEVQSLQ 291
>sp|P55098|PEX2_MOUSE Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3)
gb|AAA21742.1| peroxisome assembly factor-1
Length = 305
Score = 357 bits (917), Expect = 6e-97, Method: Composition-based stats.
Identities = 88/310 (28%), Positives = 152/310 (49%), Gaps = 29/310 (9%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+A+R + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MAAREESTQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++++++ + + QK+ Y V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQHKNDSSPNPVYQ----------PPSKNQKLLYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+GG++L R + FR R LA + + + G+ K +N L FL G+
Sbjct: 111 IGGRWLEER--CYDLFR------NRHLASFGKAKQCMNFVVGLLKLGELMNFLIFLQKGK 162
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
+ L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS
Sbjct: 163 FATLTERLLGIHSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSS 222
Query: 262 FAKDKS------SSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCL 315
+ + S+ C +C P +P + C+H +CYYC+++ F C
Sbjct: 223 WCTLCTGAAGHDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCP 281
Query: 316 RCNEPVVAIQ 325
+C V ++Q
Sbjct: 282 KCGTEVHSVQ 291
>ref|NP_001093818.1| peroxin 2 [Bos taurus]
gb|AAI48002.1| LOC512677 protein [Bos taurus]
Length = 305
Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats.
Identities = 88/298 (29%), Positives = 151/298 (50%), Gaps = 27/298 (9%)
Query: 36 AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVD 95
+ R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL +WRF+I+
Sbjct: 13 RVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSK 72
Query: 96 KPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQS 155
T G +++N++Y+++ L + QK+WY V ++GG++L R
Sbjct: 73 NATVGQSVLNIQYQNDLS----------PNLSYQPPSRNQKLWYAVCTIGGKWLEER--C 120
Query: 156 FSAFRRWGDSEQRPLA--RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKAR 213
+ FR R +A R+ + + G+ K +N L FL G++ L E+ L
Sbjct: 121 YDLFR------NRHIASFRKAKQCMNLVVGLLKLGGLINFLIFLQRGKFATLTERLLGIH 174
Query: 214 LVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKED 273
V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N ++ LS + + + +
Sbjct: 175 SVFHKPQSVREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLRAKLSSWCVPLTGAPGSN 234
Query: 274 ------TVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
C +C P +P + C+H +CYYC+++ SF C +C V ++Q
Sbjct: 235 STLATSGRQCSLCGEWPTMPH-TVGCEHVFCYYCVKSSFLFDMSFTCPKCGTEVHSLQ 291
>sp|Q06438|PEX2_CRIGR Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3)
emb|CAA78929.1| peroxisome assembly factor 1 [Cricetulus griseus]
dbj|BAA06308.1| peroxisome assembly factor-1 [Cricetulus griseus]
Length = 304
Score = 355 bits (911), Expect = 3e-96, Method: Composition-based stats.
Identities = 87/309 (28%), Positives = 150/309 (48%), Gaps = 28/309 (9%)
Query: 26 LASRRSVIPV-AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLE 84
+A R + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MAGREKTKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACLW 60
Query: 85 FLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASV 144
+WRF+I+ T G +++N++Y+++ + + QK+WY V ++
Sbjct: 61 LFLWRFTIYSKNATVGQSVLNIQYKNDFS----------SNSRYQPPSKNQKLWYAVCTI 110
Query: 145 GGQYLFSRLQSFSAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGRY 202
GG++L R + FR R LA ++ + + G+ K +N L FL G++
Sbjct: 111 GGRWLEER--CYDLFR------NRHLASFGKVKQCMNVMVGLLKLGELINFLIFLQKGKF 162
Query: 203 RNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPF 262
L E+ L V+ P R V F+YMNR+L+W+ F+E L+ LLPL+N K LS +
Sbjct: 163 ATLTERLLGIHSVFCKPQNIREVGFDYMNRELLWHGFAEFLIFLLPLINIQKFKAKLSSW 222
Query: 263 AKDKSS------STKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLR 316
+ + C +C P +P + C+H +CYYC+++ F C +
Sbjct: 223 CIPLTGAASSDSALASSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDMYFTCPK 281
Query: 317 CNEPVVAIQ 325
C V ++Q
Sbjct: 282 CGIEVHSVQ 290
>ref|NP_001008454.1| peroxin 2 [Gallus gallus]
emb|CAG31179.1| hypothetical protein [Gallus gallus]
Length = 304
Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats.
Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 25/308 (8%)
Query: 24 SLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
S + + +SV P + R++Q DA L+ + ++ Q F KPG+L EPE+ AFL
Sbjct: 3 SSIGNEKSVNP--VLRISQLDALELNKALEQLVWSQFTSCFHGFKPGVLAHIEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
L+WRF+I+ T G A++N++Y++ + L+ QK+WY + +
Sbjct: 61 WLLLWRFTIYSKNATVGQAILNIQYKNNLSQTE----------KYQPLSKHQKLWYLIFT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
VGG++L R + R Q ++ + G+ K +N L FL G +
Sbjct: 111 VGGRWLEERCYDLFSNR------QLQSVSKIKHYINFGAGLLKLCGLVNFLIFLQKGTFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L R V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K + +
Sbjct: 165 TLTERILGIRSVFCKPQSVRQVGFEYMNRELLWHGFAEFLIYLLPLINVQKLKLKICSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
++ D C +C P +P + C H +CYYCI++ F C +C
Sbjct: 225 FPIANLPNSDKTLATHYKVCSLCGEWPTMPH-TIGCSHVFCYYCIKSNYLFDMYFTCPKC 283
Query: 318 NEPVVAIQ 325
V ++Q
Sbjct: 284 GSEVHSLQ 291
>ref|XP_001816880.1| hypothetical protein [Aspergillus oryzae RIB40]
dbj|BAE54878.1| unnamed protein product [Aspergillus oryzae]
Length = 516
Score = 351 bits (901), Expect = 5e-95, Method: Composition-based stats.
Identities = 104/369 (28%), Positives = 150/369 (40%), Gaps = 70/369 (18%)
Query: 22 SQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDA 81
++ R P RV Q DA LD E+ +LK Q+ P + E+
Sbjct: 107 WNTIKG-REGNRPAF--RVGQVDAELLDEELLGLLKGQVGNALKYFGPQAREDWSHEIQF 163
Query: 82 FLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCV 141
L ++++ SIW + G AL NL+Y D R H T QK Y +
Sbjct: 164 ALRAILFKLSIWDHNASYGAALQNLKYVDTRSKGPIHS----------APTKWQKSLYGL 213
Query: 142 ASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+VGG+Y + + +S+ + G E R L + I + A+F++ L FL GR
Sbjct: 214 LTVGGRYAWEKWESWLINQEGGYDEPSREVRILARMTDLISTTHSIAAFISFLVFLVNGR 273
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
YR L+++ L+ RL S +R VSFEY+NRQLVW+ F+E LL LLPL+ S + +S
Sbjct: 274 YRTLVDRILRIRLTPPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRWRRWISR 333
Query: 262 FAKDKSSSTKED-----------------TVTCPIC------------------------ 280
+ SS + TC IC
Sbjct: 334 AWRRTMSSIRSSDGDSEEAEKQGELAFLPERTCAICYKASNPESATESEVIAASAASGGI 393
Query: 281 ----QVDPAIPFIALPCQHRYCYYCI--RTRCASAASFRCLRCNEPVVAIQ--------- 325
Q D P+ A+PC YC+ C+ + + CLRC E V +
Sbjct: 394 LGSAQTDITNPYEAIPCGCVYCFVCLVQKVEGEEGEGWICLRCGEIVKKCKPWHGDVLEE 453
Query: 326 -REGVSSGK 333
R SSGK
Sbjct: 454 ARPQSSSGK 462
>ref|XP_001265299.1| peroxisome biosynthesis protein (Peroxin-2), putative [Neosartorya
fischeri NRRL 181]
gb|EAW23402.1| peroxisome biosynthesis protein (Peroxin-2), putative [Neosartorya
fischeri NRRL 181]
Length = 479
Score = 349 bits (897), Expect = 1e-94, Method: Composition-based stats.
Identities = 106/367 (28%), Positives = 148/367 (40%), Gaps = 68/367 (18%)
Query: 22 SQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDA 81
S+ R P RV Q DA LD E+ +LK Q+ P + + E+
Sbjct: 60 WNSIKG-REGSRPAF--RVGQVDAELLDEELLGLLKGQVGNALKYFGPQLREDWSHEIQF 116
Query: 82 FLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCV 141
L ++++ SIW + G AL LRY D R H T QK Y +
Sbjct: 117 ALRAILFKLSIWDHNASYGAALQGLRYVDSRSKGPVHST----------PTKWQKSLYGL 166
Query: 142 ASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+VGG+Y + + +S+ + G E R L L + + A+F++ L FL GR
Sbjct: 167 LTVGGRYAWEKWESWLIGQEGGYEEPSRDVRMLARLTDLVSTTHSIAAFVSFLVFLVNGR 226
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
YR LI++ L+ RL S R VSFEY+NRQLVW+ F+E LL LLPL+ S + LS
Sbjct: 227 YRTLIDRILRIRLTPPSAQSAREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRWRRWLSR 286
Query: 262 FAKDK-----SSSTKEDTV------------TCPIC------------------------ 280
+ S ED V TC IC
Sbjct: 287 AWRKTISAIRSRDDDEDEVEKRGELAFLPERTCAICYKDQNPASTSENDIIAASAGGIVG 346
Query: 281 --QVDPAIPFIALPCQHRYCYYCI--RTRCASAASFRCLRCNEPVVAIQ----------R 326
Q D P+ +PC YC+ C+ + + CLRC E V + R
Sbjct: 347 SAQTDITNPYETVPCGCIYCFVCLVQKVEGEEGEGWICLRCGEIVKKCKPWNGDVLEEVR 406
Query: 327 EGVSSGK 333
+ GK
Sbjct: 407 PSTTPGK 413
>ref|XP_001398873.1| hypothetical protein An18g04150 [Aspergillus niger]
emb|CAK43217.1| unnamed protein product [Aspergillus niger]
Length = 481
Score = 346 bits (889), Expect = 1e-93, Method: Composition-based stats.
Identities = 107/377 (28%), Positives = 156/377 (41%), Gaps = 75/377 (19%)
Query: 19 LPE-----SQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLF 73
LP+ ++ R + P RV Q DA LD E+ +LK Q+ P +
Sbjct: 52 LPQSGFSLWNAIRG-REGIRPAY--RVGQVDAELLDEELLGLLKGQVGDALKYYGPQLRE 108
Query: 74 QYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTS 133
+ E+ L ++++ SIW + G AL NL+Y D R H T
Sbjct: 109 DWSHEIQFALRAILFKLSIWDHDASYGAALQNLKYIDSRSKGPVHS----------APTK 158
Query: 134 PQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNL 193
QK Y + +VGG+Y + + +S+ + G E R L + + + A+F++
Sbjct: 159 WQKSLYGLLTVGGRYAWGKWESWLINQESGYEEPSQEVRMLARMTDLVSASHSIAAFVSF 218
Query: 194 LSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSS 253
L FL GRYR L+++ L+ RL+ S +R VSFEY+NRQLVW+ +E LL LLPL+ S
Sbjct: 219 LVFLVNGRYRTLVDRVLRMRLIPPSAQASREVSFEYLNRQLVWHAMTEFLLFLLPLVGIS 278
Query: 254 AVKNILSPFAKD-----KSSSTKED------------TVTCPIC---------------- 280
+ LS + KS S E+ TC IC
Sbjct: 279 RWRRWLSRLWRKTLSTLKSGSEDEEQTGKQGELAFLPERTCAICYKDNNPTSTTEGEAIA 338
Query: 281 ------------QVDPAIPFIALPCQHRYCYYCI--RTRCASAASFRCLRCNEPVVAIQ- 325
Q D P+ +PC YC+ CI + + CLRC E V +
Sbjct: 339 ASASSGGIVGSAQTDITNPYEIIPCGCIYCFVCIVQKLEGEEGEGWVCLRCGEIVKKCKP 398
Query: 326 ---------REGVSSGK 333
R SSGK
Sbjct: 399 WNGDVLEETRPQSSSGK 415
>ref|XP_750106.1| peroxisome biosynthesis protein (Peroxin-2) [Aspergillus fumigatus
Af293]
gb|EAL88068.1| peroxisome biosynthesis protein (Peroxin-2), putative [Aspergillus
fumigatus Af293]
gb|EDP55700.1| peroxisome biosynthesis protein (Peroxin-2), putative [Aspergillus
fumigatus A1163]
Length = 479
Score = 345 bits (885), Expect = 3e-93, Method: Composition-based stats.
Identities = 104/367 (28%), Positives = 147/367 (40%), Gaps = 68/367 (18%)
Query: 22 SQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDA 81
S+ R P RV Q DA LD E+ +LK Q+ P + + E+
Sbjct: 60 WNSIKG-REGSRPAF--RVGQVDAELLDEELLGLLKGQVGNALKYFGPQLREDWSHEIQF 116
Query: 82 FLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCV 141
L ++++ SIW + G AL LRY D R H T QK Y +
Sbjct: 117 ALRAILFKLSIWDHNASYGAALQGLRYVDSRSKGPVHST----------PTKWQKSLYGL 166
Query: 142 ASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+VGG+Y + + +S+ + G E R L L + + A+F++ L FL GR
Sbjct: 167 LTVGGRYAWEKWESWLISQEGGYEEPSRDVRMLARLTGLVSTTHSIAAFVSFLVFLVNGR 226
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
YR L+++ L+ RL S R VSFEY+NRQLVW+ F+E LL LLPL+ S + LS
Sbjct: 227 YRTLVDRILRIRLTPPSAQSAREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRWRRWLSR 286
Query: 262 FAKDK-----SSSTKE------------DTVTCPIC------------------------ 280
+ S E TC IC
Sbjct: 287 AWRKAISAIRSRDDDEVEVEKRGELAFLPERTCAICYKDQNPASTSENDIITASAGGIVG 346
Query: 281 --QVDPAIPFIALPCQHRYCYYCI--RTRCASAASFRCLRCNEPVVAIQ----------R 326
Q D P+ +PC YC+ C+ + + CLRC E V + R
Sbjct: 347 SAQTDITNPYETVPCGCIYCFVCLVQKVEGEEGEGWICLRCGEIVKKCKPWNGDVLEEVR 406
Query: 327 EGVSSGK 333
+SGK
Sbjct: 407 PSTTSGK 413
>ref|XP_001269799.1| peroxisome biosynthesis protein (Peroxin-2), putative [Aspergillus
clavatus NRRL 1]
gb|EAW08373.1| peroxisome biosynthesis protein (Peroxin-2), putative [Aspergillus
clavatus NRRL 1]
Length = 486
Score = 344 bits (882), Expect = 8e-93, Method: Composition-based stats.
Identities = 103/357 (28%), Positives = 145/357 (40%), Gaps = 63/357 (17%)
Query: 19 LPE-----SQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLF 73
LP+ S+ R P RV Q DA LD E+ +LK Q+ P +
Sbjct: 52 LPQSGFTLWNSIKG-REGNRPAF--RVGQVDAELLDEELLGLLKNQVGDALKYFGPQLRE 108
Query: 74 QYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTS 133
+ E+ L L+++ SIW + G AL LRY D R H T
Sbjct: 109 DWSHEIQFVLRALLFKLSIWDHNASYGAALQGLRYVDCRSKGPVHST----------PTR 158
Query: 134 PQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNL 193
QK Y + +VGG+Y + + +S+ + G E R L + I + A+F +
Sbjct: 159 WQKTIYGLLTVGGRYAWEKWESWLINQEGGYEEPSREVRMLSRMTDLISTTHSIAAFTSF 218
Query: 194 LSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSS 253
L FL GRYR L+++ L+ RL S R VSFEY+NRQLVW+ F+E LL LLPL+ S
Sbjct: 219 LVFLVNGRYRTLVDRILRIRLTPPSAQSAREVSFEYLNRQLVWHAFTEFLLFLLPLVGIS 278
Query: 254 AVKNILSPFAKDKSSSTKED-----------------TVTCPIC---------------- 280
+ LS + S+ + TC IC
Sbjct: 279 RWRRWLSRVWRKMISAIRSSGDDDEPVEKQGELAYLPERTCAICYKDQNPTSTSENEVMA 338
Query: 281 ----------QVDPAIPFIALPCQHRYCYYCI--RTRCASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ C+ + + CLRC E V Q
Sbjct: 339 ASSGGIVGSAQTDITNPYETIPCGCIYCFVCLVQKVEGEEGEGWVCLRCGEIVKRCQ 395
>ref|NP_001016841.1| peroxin 2 [Xenopus tropicalis]
emb|CAJ82611.1| peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Xenopus
tropicalis]
gb|AAI21554.1| Peroxisomal membrane protein 3 [Xenopus tropicalis]
Length = 306
Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats.
Identities = 92/302 (30%), Positives = 151/302 (50%), Gaps = 24/302 (7%)
Query: 30 RSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWR 89
+ P + R++Q DA L+ + ++ Q F KPG+L ++EPE+ AFL +WR
Sbjct: 9 EEINP--VLRISQLDAIELNKALEQLIWSQFNSCFQGFKPGLLTRFEPEIKAFLCLFLWR 66
Query: 90 FSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYL 149
++I+ T G A++N++Y+++ + L QK+W+ + VGG++L
Sbjct: 67 YTIYTKNATVGQAILNMQYKNDLEATKNYR----------PLNKQQKVWFALFMVGGKWL 116
Query: 150 FSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKA 209
R SF F +R + I G+ K + LN L FL G++ L E+
Sbjct: 117 EER--SFDLFSNHPFGAS---FQRTKYFLNAISGLLKFGALLNFLIFLQQGKFATLTERL 171
Query: 210 LKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSS 269
L R V+ P R V FEYMNR+++W+ F+E L+ LLPL+N+ +K+ L + K
Sbjct: 172 LGIRSVFSRPQDVRQVGFEYMNREILWHGFAEFLIFLLPLINTQKLKSKLFSWCKPAKGH 231
Query: 270 TKED------TVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVA 323
+ D C +C PA+P + C H +CYYCI++ + F C +C+ V
Sbjct: 232 SLSDPSLAVICKECCLCGEWPAMPH-TIGCSHVFCYYCIKSNYMADMYFTCPKCSSQVHN 290
Query: 324 IQ 325
+Q
Sbjct: 291 LQ 292
>ref|XP_661660.1| hypothetical protein AN4056.2 [Aspergillus nidulans FGSC A4]
gb|EAA58944.1| hypothetical protein AN4056.2 [Aspergillus nidulans FGSC A4]
Length = 444
Score = 341 bits (875), Expect = 5e-92, Method: Composition-based stats.
Identities = 103/358 (28%), Positives = 150/358 (41%), Gaps = 61/358 (17%)
Query: 16 QRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQY 75
+ L ++ R P RV Q DA LD E+ +LK Q+ P + +
Sbjct: 54 RSGLSIWDAIKG-REGTRPAF--RVGQVDAELLDEELLGLLKGQVGDALKYFGPHLRDDW 110
Query: 76 EPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQ 135
E+ L ++++ SIW + G AL +L+Y D R H T Q
Sbjct: 111 SHEIQFVLRAILFKLSIWDHDASYGAALQSLKYVDSRSKGPVHST----------PTMLQ 160
Query: 136 KIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLS 195
K Y + +VGG+Y + + +S+ R G E P R L + + + A+F + L
Sbjct: 161 KSLYGLLTVGGRYAWDKWESWLISREGGYEEPSPEVRSLSRITNFLSTTHSIAAFFSFLI 220
Query: 196 FLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAV 255
FL GRYR LI++ L+ RL S +R VSFEY+NRQLVW+ F+E LL LLPL+ S
Sbjct: 221 FLVDGRYRTLIDRLLRMRLTPPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRW 280
Query: 256 KNILSPFAKDK-----SSSTKEDTV-------------TCPIC----------------- 280
+ +S + S+S ED V +C IC
Sbjct: 281 RRWVSRAWRKAMSAIRSTSVDEDEVSEKQGELAFLPERSCAICYKANNTATTETEVIAAA 340
Query: 281 -----------QVDPAIPFIALPCQHRYCYYCI--RTRCASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ CI + + CLRC E V +
Sbjct: 341 SSGAGGIIGSAQTDITNPYETIPCGCIYCFVCIVQKLEGEEGEGWVCLRCGELVKKCK 398
>gb|EEH42793.1| peroxisomal biogenesis factor 2 [Paracoccidioides brasiliensis
Pb18]
Length = 488
Score = 341 bits (874), Expect = 6e-92, Method: Composition-based stats.
Identities = 100/352 (28%), Positives = 148/352 (42%), Gaps = 66/352 (18%)
Query: 25 LLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLE 84
+ R P RV Q DA LD E+ +LK Q+ + + + E+ L
Sbjct: 59 TIKGREGTKPAF--RVGQVDAELLDEELLTLLKGQVGEGLKYFGSHIKEDWTHEIQFALR 116
Query: 85 FLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLT---SPQKIWYCV 141
++++ S+W + G AL NL+Y D R +GP L+ QK Y +
Sbjct: 117 AILFKLSVWDHNASYGAALQNLKYTDSR-------------QKGPTLSDPTKSQKALYGL 163
Query: 142 ASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+VGG+Y++ + +S+ + G E R L + I + ASF++ L FL GR
Sbjct: 164 FTVGGRYIWDKWESWLIDQEGGYDEPSTQIRLLSRITNTISTTHSIASFVSFLVFLTNGR 223
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNIL-S 260
YR LI++ L+ RL ++R VSFEY+NRQLVW+ F+E LL LLPL+ + +
Sbjct: 224 YRTLIDRLLRMRLAPPFTQVSREVSFEYLNRQLVWHAFTEFLLFLLPLVGIGRWRRWITR 283
Query: 261 PFAKDKSSSTKED-----------------TVTCPIC----------------------- 280
+ K SS D TCPIC
Sbjct: 284 AWRKTMSSLRTADEGNDEQVKAQGGLAFLPERTCPICYQEQNPAARSENDVLGASGASGG 343
Query: 281 -----QVDPAIPFIALPCQHRYCYYCI--RTRCASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ CI + + CLRC E V +
Sbjct: 344 IIGSAQTDVVNPYETMPCGCIYCFVCIAEKLEAEEGEGWICLRCGEIVKKCK 395
>gb|EEH34726.1| peroxisomal biogenesis factor 2 [Paracoccidioides brasiliensis
Pb01]
Length = 488
Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats.
Identities = 100/352 (28%), Positives = 152/352 (43%), Gaps = 66/352 (18%)
Query: 25 LLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLE 84
+ R P RV Q DA LD E+ +LK Q+ + + + E+ L
Sbjct: 59 TIKGREGTKPAF--RVGQVDAELLDEELLTLLKGQVGEGLKYFGSHIKEDWTHEIQFALR 116
Query: 85 FLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP---QKIWYCV 141
++++ S+W + G AL NL+Y D R +GP L+ P QK Y +
Sbjct: 117 AILFKLSVWDHNASYGAALQNLKYTDSR-------------QKGPTLSDPTKWQKALYGL 163
Query: 142 ASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+VGG+Y++ + +S+ + G +E P R L + I + ASF++ L FL GR
Sbjct: 164 YTVGGRYIWDKWESWLIDQEGGYNEPSPQIRLLSRITNTISTTHSIASFVSFLVFLTNGR 223
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
YR LI++ L+ RL S ++R VSFEY+NRQLVW+ F+E LL LLPL+ + +S
Sbjct: 224 YRTLIDRLLRMRLAPPSTQVSREVSFEYLNRQLVWHAFTEFLLFLLPLVGIGRWRRWISR 283
Query: 262 FAKDK-----SSSTKED-------------TVTCPIC----------------------- 280
+ ++ +D CPIC
Sbjct: 284 AWRKTMLSLRTADEGDDEQVKAQGELAFLPERACPICYQEQNPAARSENDVLGASGGSGG 343
Query: 281 -----QVDPAIPFIALPCQHRYCYYCI--RTRCASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ CI + + CLRC E V +
Sbjct: 344 IIGSAQTDVVNPYETMPCGCIYCFVCIAEKLEAEEGEGWICLRCGEIVKKCK 395
>gb|EAZ33629.1| hypothetical protein OsJ_017112 [Oryza sativa (japonica
cultivar-group)]
Length = 252
Score = 338 bits (867), Expect = 4e-91, Method: Composition-based stats.
Identities = 174/232 (75%), Positives = 201/232 (86%), Gaps = 1/232 (0%)
Query: 9 DAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK 68
DAW Y+RLLP+ +S+ S + IP++ISRVNQFDAARLDVEMSAMLKEQLVKVF+L+K
Sbjct: 22 DAWAAEYRRLLPQWESMRDSSKIAIPISISRVNQFDAARLDVEMSAMLKEQLVKVFSLVK 81
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEG 128
PG+LFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDER +VRTGLEG
Sbjct: 82 PGLLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAA-PITGKEVRTGLEG 140
Query: 129 PGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAA 188
PGL+ QK+ YC+++VGGQY++SRLQSFSAFRRWGDSEQRPLARR W LVQ EG+Y+A+
Sbjct: 141 PGLSVSQKVLYCISTVGGQYIWSRLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRAS 200
Query: 189 SFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
SF NLL FLY RY+ ++E+ LKARLVY SP+MNR+VSFEYMNRQLVWNEFS
Sbjct: 201 SFFNLLLFLYGARYKTIVERILKARLVYESPNMNRAVSFEYMNRQLVWNEFS 252
>ref|XP_001220945.1| hypothetical protein CHGG_01724 [Chaetomium globosum CBS 148.51]
gb|EAQ93489.1| hypothetical protein CHGG_01724 [Chaetomium globosum CBS 148.51]
Length = 597
Score = 337 bits (865), Expect = 7e-91, Method: Composition-based stats.
Identities = 98/357 (27%), Positives = 154/357 (43%), Gaps = 69/357 (19%)
Query: 26 LASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK---------------PG 70
++ R P RV Q DA LD E+ +L+ Q+ +
Sbjct: 128 ISGREGTRPAF--RVGQVDAELLDEELVGLLRGQVGDALRYVGGGVGGGGGGAGGAGGSA 185
Query: 71 MLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPG 130
+L +E E+ L ++++ ++W T G AL NLRY D R R G
Sbjct: 186 VLHDWEAEVSLVLRAVLFKLTVWDHDATYGAALQNLRYTDAR----------RDGPGLVP 235
Query: 131 LTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASF 190
+ QK Y + +VGG+YL+++ + + + G P A+RL + ++ +A+F
Sbjct: 236 PSKWQKSLYGLVTVGGRYLWAKWEDWLLEQDDGFQGPSPGAQRLARWSSMLSTMHASAAF 295
Query: 191 LNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLL 250
+ L FL GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+
Sbjct: 296 ASFLVFLLHGRYRTLLDRVLRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLV 355
Query: 251 NSSAVKNIL-SPFAKDK----SSSTKED----------TVTCPIC--------------- 280
+ + L + K K + + D TC IC
Sbjct: 356 GINRWRRWLARTWRKTKKIMTTGAEGADEKKGEYSFLPERTCAICYQDQNSVSSENDLMA 415
Query: 281 ----------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ C+ TR + CLRC E V +
Sbjct: 416 ATSSGVVGSAQTDITNPYATIPCGCIYCFVCLTTRIEREEGEGWSCLRCGELVKECR 472
>ref|XP_964597.1| peroxisomal biogenesis factor 2 [Neurospora crassa OR74A]
gb|EAA35361.1| peroxisomal biogenesis factor 2 [Neurospora crassa OR74A]
Length = 639
Score = 337 bits (865), Expect = 7e-91, Method: Composition-based stats.
Identities = 102/367 (27%), Positives = 160/367 (43%), Gaps = 69/367 (18%)
Query: 16 QRLLPESQSL---LASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPG-- 70
+RL + S ++SR P RV Q DA LD E+ +L+ Q+ + G
Sbjct: 91 RRLGSSTLSFWDAISSREGTRPAF--RVGQVDAELLDAELVDLLRTQVGDALKYIGGGVS 148
Query: 71 --MLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEG 128
+ +++ E+ L ++++ +IW T G AL NLRY D R ++G
Sbjct: 149 STLKDEWDAEILLILRAILFKLTIWDHDATYGAALQNLRYTDAR----------KSGPVL 198
Query: 129 PGLTSPQKIWYCVASVGGQYLFSRLQSFSAFR----RWGDSEQRPLARRLWTLVQRIEGI 184
+ QK Y +VGG+YL+++ +++ + P +RL L + I
Sbjct: 199 QPPSKLQKSLYGFVTVGGKYLWTKWETYLLDHDEASSYSVEGPNPNIQRLSRLTESIGTF 258
Query: 185 YKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLL 244
+ ASF + L FL GRYR ++++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL
Sbjct: 259 HAFASFASFLVFLLHGRYRTILDRLLRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLL 318
Query: 245 LLLPLLNSSAVKNIL-SPFAKDKSSSTKED----------------TVTCPIC------- 280
+LPL+ + + L + + KS T TC IC
Sbjct: 319 FVLPLVGINRWRRWLARTWRRTKSMLTTSSTNDPTQNKGGEFAFLPERTCAICYQDQNSA 378
Query: 281 --------------------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCN 318
Q D P+ A+PC YC+ C+ TR + CLRC
Sbjct: 379 KSEAELMAAASSSSGVVGSAQTDITNPYEAMPCGCVYCFVCVATRIEREEGEGWTCLRCG 438
Query: 319 EPVVAIQ 325
E V +
Sbjct: 439 ELVKECK 445
>ref|XP_001212277.1| peroxisomal biogenesis factor 2 [Aspergillus terreus NIH2624]
gb|EAU36373.1| peroxisomal biogenesis factor 2 [Aspergillus terreus NIH2624]
Length = 473
Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats.
Identities = 107/377 (28%), Positives = 154/377 (40%), Gaps = 75/377 (19%)
Query: 19 LPE-----SQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLF 73
LP+ ++ R + P RV Q DA LD E+ +LK Q+ P +
Sbjct: 52 LPQTGFSLWNAIRG-REGIRPAF--RVGQVDAELLDEELLGLLKNQVGDALKYYGPQLRE 108
Query: 74 QYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTS 133
+ E+ L L+++ SIW + G AL L+Y D R H T
Sbjct: 109 DWSNEIQFALRALLFKLSIWDHDASYGAALQGLKYVDSRSKGPVHST----------PTK 158
Query: 134 PQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNL 193
QK Y + +VGG+Y + + +S+ + G E R L L + + A+F++
Sbjct: 159 WQKTLYGLLTVGGRYAWDKWESWLINQEGGYEEPSREVRLLSRLTDLVSTTHSIAAFISF 218
Query: 194 LSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSS 253
L FL GRYR L+++ L+ RL S +R VSFEY+NRQLVW+ F+E LL LLPL+ S
Sbjct: 219 LVFLVNGRYRTLVDRILRIRLTPPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGIS 278
Query: 254 AVKNILSPFAKDK----SSSTKEDTV-------------TCPIC---------------- 280
+ +S + SS ED TC IC
Sbjct: 279 RWRRWVSRAWRKTMATLKSSEDEDETVEKQGELAFLPERTCGICYQQNNPSSATESEAIA 338
Query: 281 ------------QVDPAIPFIALPCQHRYCYYCI--RTRCASAASFRCLRCNEPVVAIQ- 325
Q D P+ A+PC YC+ C+ + + CLRC V +
Sbjct: 339 ASAASGGIIGSAQTDITNPYEAVPCGCVYCFVCLVQKIEGEEGEGWVCLRCGAVVKKCKP 398
Query: 326 ---------REGVSSGK 333
R SSGK
Sbjct: 399 WNGDVLEEARPQSSSGK 415
>gb|ABH11413.1| peroxin 2 [Penicillium chrysogenum]
Length = 487
Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats.
Identities = 97/350 (27%), Positives = 142/350 (40%), Gaps = 59/350 (16%)
Query: 22 SQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDA 81
S+ R P RV Q DA LD E+ +LK Q+ P M + E+
Sbjct: 60 WNSIKG-RDGTRPAF--RVGQVDAELLDEELLGLLKGQVGDALKYFGPQMREDWSHEILF 116
Query: 82 FLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCV 141
L ++++ SIW + G AL L+Y D R + T QK Y +
Sbjct: 117 ALRAILFKLSIWDHNASYGAALQGLKYTDSRSKGPVY----------ASPTKWQKGIYGL 166
Query: 142 ASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+VGG+Y + + +S+ + G E R L L + + A+F++ L FL GR
Sbjct: 167 LTVGGRYAWDKWESWLVGQEGGYDEPSQDIRMLSGLTGILSTSHSIAAFVSFLVFLVNGR 226
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
YR L+++ L+ RL S +R VSFEY+NRQLVW+ F+E LL LLPL+ + ++
Sbjct: 227 YRTLVDRILRIRLAPPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGIGRWRRWIAR 286
Query: 262 FAKDKSSSTKED-----------------TVTCPIC------------------------ 280
+S + TC IC
Sbjct: 287 AWHKMVNSVRSSGDDDEIPEKQGELAFLPERTCAICYRDQNPTTTTESDAIAASASGGIV 346
Query: 281 ---QVDPAIPFIALPCQHRYCYYCI--RTRCASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ CI + + CLRC E V Q
Sbjct: 347 GSAQTDITNPYETVPCGCIYCFVCIVQKIEAEEGQGWSCLRCGEVVKKCQ 396
>ref|XP_645304.1| RING Zn finger-containing protein [Dictyostelium discoideum AX4]
gb|AAS45382.1| similar to Rattus norvegicus (Rat). Peroxisome assembly factor-1
(PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3)
[Dictyostelium discoideum]
gb|EAL71269.1| RING Zn finger-containing protein [Dictyostelium discoideum AX4]
Length = 423
Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats.
Identities = 106/323 (32%), Positives = 168/323 (52%), Gaps = 33/323 (10%)
Query: 36 AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVD 95
+I RV+Q D+ARLD E+ +L+ Q +K+FT KP + ++PE++ L+ +I++ SI+
Sbjct: 107 SIVRVSQLDSARLDEEILDLLRSQFMKIFTFFKPNFIHNFQPEINLVLKSVIYKLSIFNL 166
Query: 96 KPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQS 155
T GN L NL YR+E+ +R + LT QK + ++GG++L++R+
Sbjct: 167 GTTYGNQLQNLTYRNEKA-----FDPIRGSDQLNKLTMRQKWLSGLINIGGEWLWTRINR 221
Query: 156 FSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLV 215
+ W + + ++ W + E YKA + LN L+FL+ G+Y L+ + L RLV
Sbjct: 222 YLINNNWSEHPPNDIRKKFWNFLNFAESAYKALALLNFLTFLFNGKYVTLVNRILHMRLV 281
Query: 216 YRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDT- 274
Y P ++R++SFEYMNR LVW+ F+E +L ++PL+N +K+ L S
Sbjct: 282 YAHPTLSRNISFEYMNRLLVWHGFTEFILFIMPLINIDRIKSFLYRLLVKTSFGNSSGNN 341
Query: 275 -------------------------VTCPICQVDPA-IPFIALPCQHRYCYYCIRTRCAS 308
CPIC DP +P+ A C H +CYYCI+T C
Sbjct: 342 NNTASNPLQQLQKQQLLIQQQQMALAKCPICMNDPISMPYSA-DCGHLFCYYCIKTSCMI 400
Query: 309 AASFRCLRCNEPVVAIQREGVSS 331
+SF C RCN + I+R +
Sbjct: 401 DSSFTCPRCNSLISNIKRFSIQD 423
>ref|XP_380900.1| hypothetical protein FG00724.1 [Gibberella zeae PH-1]
Length = 439
Score = 330 bits (847), Expect = 8e-89, Method: Composition-based stats.
Identities = 97/354 (27%), Positives = 153/354 (43%), Gaps = 57/354 (16%)
Query: 16 QRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQ- 74
R+ + +++R P RV Q DA LD+E+ +LK+Q+ + G L
Sbjct: 49 NRIGSAWDA-VSTREGTRPAF--RVGQVDAELLDIELLDILKDQVSEGLKYFGGGHLHDD 105
Query: 75 YEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP 134
+ E+ L ++++ ++W T G AL NL+Y D R GL +
Sbjct: 106 WSAEIMLALRAVLFKLTVWDHDATYGAALQNLKYTDARND----------GLILKAPSKV 155
Query: 135 QKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLL 194
QK Y + +V G Y ++R + + G E P +RL I ++ AA+ ++ L
Sbjct: 156 QKSLYGLVTVFGNYAWTRWEDWLLEHDDGYDEPSPRLKRLSKFTSAISTVHSAAACVSFL 215
Query: 195 SFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSA 254
FL GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+
Sbjct: 216 VFLLHGRYRTLLDRILRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLIGIQR 275
Query: 255 VKNILSPFAKDK-----SSSTKED----------TVTCPIC------------------- 280
+ L+ + + +E TC IC
Sbjct: 276 WRRWLTRTWRKTKDIIRTGPQEEGKANGEYAFLPERTCAICYQDQNNATSENEVMAAAAS 335
Query: 281 -------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ C+ TR + CLRC E V +
Sbjct: 336 SGVVGSAQTDITNPYETIPCGCVYCFVCLATRLEREEGEGWTCLRCGEHVKECK 389
>ref|XP_519817.2| PREDICTED: peroxisomal membrane protein 3 [Pan troglodytes]
Length = 326
Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats.
Identities = 81/273 (29%), Positives = 134/273 (49%), Gaps = 23/273 (8%)
Query: 59 QLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQH 118
+ F KPG+L ++EPE+ A L +WRF+I+ T G +++N++Y+++
Sbjct: 57 PFTQCFHGFKPGLLARFEPEVKACLWVFLWRFTIYSKNATVGQSVLNIKYKNDFS----- 111
Query: 119 LGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLV 178
L + QKIWY V ++GG++L R + FR + Q ++ V
Sbjct: 112 -----PNLRYQPPSKNQKIWYAVCTIGGRWLEER--CYDLFR----NHQLASFGKVKQCV 160
Query: 179 QRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNE 238
+ G+ K +N L FL G++ L E+ L V+ P R V FEYMNR+L+W+
Sbjct: 161 NFVIGLLKLGGLINFLIFLQRGKFATLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHG 220
Query: 239 FSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTV------TCPICQVDPAIPFIALP 292
F+E L+ LLPL+N +K LS + + + D C +C P +P +
Sbjct: 221 FAEFLIFLLPLINVQKLKAKLSSWCIPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIG 279
Query: 293 CQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQ 325
C+H +CY+C ++ F C +C V ++Q
Sbjct: 280 CEHIFCYFCAKSSFLFDMYFTCPKCGTEVHSLQ 312
>ref|XP_001540740.1| peroxisomal biogenesis factor 2 [Ajellomyces capsulatus NAm1]
gb|EDN08070.1| peroxisomal biogenesis factor 2 [Ajellomyces capsulatus NAm1]
Length = 466
Score = 327 bits (839), Expect = 8e-88, Method: Composition-based stats.
Identities = 103/370 (27%), Positives = 153/370 (41%), Gaps = 67/370 (18%)
Query: 3 PSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVK 62
P + A DA I + + R P RV Q DA LD E+ A+LK Q+ +
Sbjct: 45 PLSRASDAGILLWD--------TIKGREGTGPAF--RVGQVDAELLDEELLALLKGQVGE 94
Query: 63 VFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKV 122
+ + E+ L ++++ S+W + G AL NL+Y D R
Sbjct: 95 GLKYFGTHIKEDWTHEIQFALRAILFKLSVWDHNASYGAALQNLKYTDSRKRSPTLSD-- 152
Query: 123 RTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIE 182
T QK Y + +VGG+Y + + +S+ + G E R L + + I
Sbjct: 153 --------PTKWQKSLYGIFTVGGRYAWDKWESWLIDQEGGYDEPPSQVRLLSRVTKVIS 204
Query: 183 GIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEM 242
+ A F++ L FL GRYR LI++ L+ RL S ++R VSFEY+NRQLVW+ F+E
Sbjct: 205 TTHSIAGFISFLVFLTNGRYRTLIDRVLRMRLAPPSTQVSREVSFEYLNRQLVWHAFTEF 264
Query: 243 LLLLLPLLNSSAVKNILS-PFAKDKSSSTKED----------------TVTCPIC----- 280
LL LLPL+ + +S + + SS D TCPIC
Sbjct: 265 LLFLLPLVGIGRWRRWVSRAWRRTMSSLKAADEGAVQAKSKGDLAFLPERTCPICYQEKN 324
Query: 281 -----------------------QVDPAIPFIALPCQHRYCYYCI--RTRCASAASFRCL 315
Q D P+ +PC YC+ CI + + CL
Sbjct: 325 PTATSENEVLGASGALGGIIGSAQTDVVNPYETMPCGCVYCFVCIAEKLEAEEGEGWICL 384
Query: 316 RCNEPVVAIQ 325
RC + V +
Sbjct: 385 RCGDLVKQCK 394
>ref|XP_001912471.1| unnamed protein product [Podospora anserina]
sp|P51021|PEX2_PODAN Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal protein
CAR1)
emb|CAA60739.1| peroxisome assembly factor [Podospora anserina]
emb|CAP59952.1| unnamed protein product [Podospora anserina]
Length = 554
Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats.
Identities = 98/352 (27%), Positives = 155/352 (44%), Gaps = 63/352 (17%)
Query: 25 LLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK------PGMLFQYEPE 78
++SR P RV Q DA LD E+ ++K Q+ + + +++ E
Sbjct: 104 TISSREGTRPAF--RVGQVDAELLDEELVELMKGQVGEAVRYYGGGGGGDNNIKHEWDAE 161
Query: 79 LDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIW 138
+ L +I++ +IW T G AL NL+Y D R TG + QK
Sbjct: 162 ISLALRAVIFKLTIWDHDATYGAALQNLKYTDAR----------HTGSVLVPPSKWQKGL 211
Query: 139 YCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLY 198
Y + +VGG+Y++S+ +++ + G E P +RL ++ R+ ++ AASF + L FL
Sbjct: 212 YGLMTVGGRYMWSKWENWLREQDGGYDEPSPTVQRLSSMTDRLSTLHAAASFASFLVFLL 271
Query: 199 TGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNI 258
GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+ + +
Sbjct: 272 QGRYRTLLDRVLRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLVGINRWRRW 331
Query: 259 LSPFAKDKSSSTKE----------------DTVTCPIC---------------------- 280
L+ + TC IC
Sbjct: 332 LARTWRKTKKIMSTTGGEGAEEKKGEFAFLPERTCAICYQDQNQATNENELMAAATSKTG 391
Query: 281 -----QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ C+ TR + CLRC E V +
Sbjct: 392 VVGSAQTDVTNPYETIPCGCVYCFVCLATRIEREEGEGWNCLRCGELVKECK 443
>ref|XP_368589.1| hypothetical protein MGG_00655 [Magnaporthe grisea 70-15]
gb|EDK02709.1| hypothetical protein MGG_00655 [Magnaporthe grisea 70-15]
Length = 498
Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 94/366 (25%), Positives = 152/366 (41%), Gaps = 70/366 (19%)
Query: 17 RLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGML---- 72
L + SR P RV Q DA LD E+ L+ Q+ + + G
Sbjct: 57 SALAFWDAAT-SREGTRPAF--RVGQVDAELLDEELLGQLRSQVSEGLRYLGGGGGGSRL 113
Query: 73 -FQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGL 131
+ PE+ L ++++ +IW T G AL NL+Y D R TG
Sbjct: 114 GDDWAPEILLALRAVLFKLTIWDHDATYGAALQNLKYTDARN----------TGSVPVPP 163
Query: 132 TSPQKIWYCVASVGGQYLFSRLQSFSAFRR---WGDSEQRPLARRLWTLVQRIEGIYKAA 188
+ QK Y +V G+Y++++ + + + + + RP+ +RL L + I+ A
Sbjct: 164 SRLQKALYGTVTVCGKYVWTKWEDWLIDQDNGAYDSQQARPVVQRLSRLTELASNIHAAG 223
Query: 189 SFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLP 248
+ ++ ++FL GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LP
Sbjct: 224 ALVSFMAFLINGRYRTLLDRILRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLP 283
Query: 249 LLNSSAVKNILSPFAKDKSSSTKED-------------------TVTCPIC--------- 280
L+ + + ++ + + TC IC
Sbjct: 284 LVGINRWRKWITRTWRRTKDAITAGTGGEGEEGGEKKGEFAFLPERTCAICYQDQNSGAN 343
Query: 281 -------------------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNE 319
Q D P+ LPC YC+ C+ TR + CLRC E
Sbjct: 344 TEEEILAAAAASSGVIGSAQTDITNPYETLPCGCIYCFVCLATRLEREEGDGWVCLRCGE 403
Query: 320 PVVAIQ 325
V +
Sbjct: 404 IVKECK 409
>ref|XP_001559557.1| hypothetical protein BC1G_01713 [Botryotinia fuckeliana B05.10]
gb|EDN28594.1| hypothetical protein BC1G_01713 [Botryotinia fuckeliana B05.10]
Length = 474
Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats.
Identities = 95/356 (26%), Positives = 149/356 (41%), Gaps = 60/356 (16%)
Query: 17 RLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYE 76
L + ++ R P RV Q DA LD EM + Q+ + + +
Sbjct: 53 AGLTTWDT-ISGREGTRPAF--RVGQVDAELLDEEMLDYDEGQVGEGLKYSGTHIQDDWS 109
Query: 77 PELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQK 136
E+ L ++ SIW T G L NL++ D R +G + QK
Sbjct: 110 AEIMLALRAILSNLSIWDHDATYGATLQNLKFTDAR----------HSGPVLVSPSKWQK 159
Query: 137 IWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSF 196
Y + +VGG+Y ++R +++ G + PL RL + + ++ A+F + L F
Sbjct: 160 SLYGLFTVGGKYAWTRWENYLVDSDNGYNTPSPLMSRLSRITDLLTNVHSTAAFASFLVF 219
Query: 197 LYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVK 256
L GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+ S +
Sbjct: 220 LVNGRYRTLLDRILRLRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLVGISRWR 279
Query: 257 NILSPFAKDK-----SSSTKE-------------DTVTCPIC------------------ 280
+LS + +SS E TC IC
Sbjct: 280 RLLSRVWRRAKSVFNTSSPDELSINEKKGELSFLPERTCAICYHDQNALQATEEGVMAAA 339
Query: 281 ---------QVDPAIPFIALPCQHRYCYYCIRTRCAS--AASFRCLRCNEPVVAIQ 325
Q D P+ + C YC+ CI ++ + + CLRC E V +
Sbjct: 340 ASTGVIGSAQTDITNPYETVECGCIYCFVCIASKLEAEEGEGWTCLRCGEDVKGCR 395
>ref|XP_001593335.1| hypothetical protein SS1G_06257 [Sclerotinia sclerotiorum 1980]
gb|EDO03776.1| hypothetical protein SS1G_06257 [Sclerotinia sclerotiorum 1980]
Length = 484
Score = 314 bits (806), Expect = 5e-84, Method: Composition-based stats.
Identities = 98/356 (27%), Positives = 154/356 (43%), Gaps = 60/356 (16%)
Query: 17 RLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYE 76
L +++ R P RV Q DA LD E+ +LK Q+ + + +
Sbjct: 53 AGLTTWD-MISGREGTRPSF--RVGQVDAELLDEELLDLLKGQVGEGLKYFGTHIQDDWS 109
Query: 77 PELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQK 136
E+ L ++++ SIW T G L NL++ D R +G + QK
Sbjct: 110 AEIMLALRAILFKLSIWDHDATYGATLQNLKFTDAR----------HSGSVLVSPSKWQK 159
Query: 137 IWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSF 196
Y + +VGG+Y ++R +++ G + PL RL + + ++ A+F + L F
Sbjct: 160 GLYGLFTVGGKYAWTRWENYLVDSDNGYNTPSPLISRLSRITDLLTNVHSTAAFASFLVF 219
Query: 197 LYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVK 256
L GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+ S +
Sbjct: 220 LVNGRYRTLLDRVLRLRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLVGISRWR 279
Query: 257 NILSPFAKDK-----SSSTKE-------------DTVTCPIC------------------ 280
LS F + +SST E TC IC
Sbjct: 280 RFLSRFWRRTKSLFNTSSTDELSSSTKKGELAFLPERTCAICYHDQNALQATEEGVMAAA 339
Query: 281 ---------QVDPAIPFIALPCQHRYCYYCIRTRCAS--AASFRCLRCNEPVVAIQ 325
Q D P+ + C YC+ CI ++ + + CLRC E V +
Sbjct: 340 ASTGVIGSAQTDITNPYETVECGCIYCFVCIASKLEAEEGEGWTCLRCGEEVKRCR 395
>gb|EDU43666.1| peroxisomal biogenesis factor 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 535
Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 97/352 (27%), Positives = 137/352 (38%), Gaps = 67/352 (19%)
Query: 29 RRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIW 88
R P RV Q DA LD E+ ++LK Q+ + + Y E+ L ++W
Sbjct: 62 RTGTRPEF--RVGQVDAELLDEELLSLLKGQVGEGLKYFGSHITDNYSAEILLVLRAILW 119
Query: 89 RFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQY 148
+ SIW + G L LRY D R P QK+ Y +VGG+Y
Sbjct: 120 KLSIWDQNASYGAHLQGLRYTDARSNAPNR----------PPPKPWQKVAYGAITVGGRY 169
Query: 149 LFSRLQSFSAFRRWGD-SEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIE 207
+++ + + + + L L + + + L FL GRYR + +
Sbjct: 170 AWTKWEDYLLSASEDYTRPESTKLKMLGRLSELAGSAHDMFGLASFLVFLVDGRYRTITD 229
Query: 208 KALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPF----- 262
+ L+ RL S +R VSFEY+NRQLVW+ F+E LL LLPL+ S + ILS
Sbjct: 230 RLLRLRLTPTSHATSREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRWRRILSRTFRKFQ 289
Query: 263 ---------AKDKSSSTKED----------TVTCPICQ---------------------- 281
+K SS E+ TC IC
Sbjct: 290 STILSLLGRSKSTSSDNDEEKASGELGFLPERTCAICYRDQNPTTASEADILASSAGGGG 349
Query: 282 ------VDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ 325
D P+ A+PC YC+ CI R + CLRC E V Q
Sbjct: 350 VVGSAATDITNPYEAMPCGCIYCFACIAQRIANEEGEGWTCLRCGETVKECQ 401
>ref|XP_820860.1| peroxin-2, putative [Trypanosoma cruzi strain CL Brener]
gb|EAN99009.1| peroxin-2, putative [Trypanosoma cruzi]
Length = 331
Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 137/317 (43%), Gaps = 10/317 (3%)
Query: 10 AWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTL-MK 68
A + Q LP SQ+ A + + RV Q A + E+ +L+ L +F L
Sbjct: 15 AMVMKQQGALPTSQTFTALPEN----HVLRVFQLGALQTQAELVDILRSSLFDIFDLDAL 70
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEG 128
+ Y+ EL FL+ +++ S W + G+ L N+ RDE + V +
Sbjct: 71 QSYRYAYQDELVFFLDVILYWGSTWRRSQSIGDRLGNIVMRDETKALENGQSSVVRLVPS 130
Query: 129 PGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAA 188
T + + + + ++ YL +LQ S W L R+ ++ + A
Sbjct: 131 LAPTRGRLLVHAILTILVPYLVRKLQRKSMEEDWEGESPGSLRARVAKTIRLASTAWAAF 190
Query: 189 SFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLP 248
S L+ L FL T +YR L+E+ L RLVY S R + Y+N+ ++W +S L +L
Sbjct: 191 SLLHTLHFLATAQYRTLVERLLSLRLVYGSQSTQRVTNLMYLNQHVMWQTWSSFLAVLNI 250
Query: 249 LLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCAS 308
S + L F S T D V C C P I + C H YCYYCI++R
Sbjct: 251 GRYLSRLTRSLQAFTSPSGSLTLGDNVCCA-CHSHPTIGQRS-NCGHLYCYYCIKSRLLD 308
Query: 309 A---ASFRCLRCNEPVV 322
SFRCLRC V
Sbjct: 309 PRLAGSFRCLRCGTTVH 325
>gb|ACO64229.1| predicted protein [Micromonas sp. RCC299]
Length = 357
Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats.
Identities = 116/323 (35%), Positives = 170/323 (52%), Gaps = 25/323 (7%)
Query: 35 VAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWV 94
V + RV Q DA RLD E+ ++L+EQ +VF ++ PG + + + EL L+ L++ F++W
Sbjct: 33 VRVLRVAQVDAGRLDDELVSLLREQFNRVFAMVFPGAVTRRQSELTLLLDALVFYFTVWS 92
Query: 95 DKPTPGNALMNLRYRDER-------GVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQ 147
+PTPG LMNLRYRDER + RTG+EG L+ Q++ Y A VGG+
Sbjct: 93 HRPTPGMELMNLRYRDERPSSSSSGSSSSSQRSTGRTGMEGAKLSVSQRLLYGTAFVGGR 152
Query: 148 YLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIE 207
+ +S+L+ RW D + R + V +E Y A + +NLL+FL GRYR L E
Sbjct: 153 FAWSKLRRAIGAGRWADEPEGSWRRVASSAVSALEATYSALALVNLLAFLNRGRYRTLTE 212
Query: 208 KALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKS 267
+AL+ RLVY PH R VS+EY+NRQLVW E SE+ L +LP++++ ++ S
Sbjct: 213 RALRTRLVYGEPHARRMVSYEYLNRQLVWREVSELALFVLPMVSAPGLRRAASRAFGVGP 272
Query: 268 SSTKEDTVT---------------CPICQVDPA-IPFIALPCQHRYCYYCIRTRCAS--A 309
C C +PA + + PC H +CYYC +R +
Sbjct: 273 GGDGPGGGRLGGAEGGAEGCRGGPCVECGGEPAGARYASTPCGHAFCYYCAASRAGTRGD 332
Query: 310 ASFRCLRCNEPVVAIQREGVSSG 332
+ C RC EPV I++ G
Sbjct: 333 RGYTCPRCREPVRGIRQVRAEGG 355
>gb|AAB48828.1| Gim1 [Leishmania donovani]
Length = 330
Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats.
Identities = 86/319 (26%), Positives = 139/319 (43%), Gaps = 14/319 (4%)
Query: 12 IRSYQRLLPESQSLLASRRSVIPV-AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK-P 69
+ Q LLP S + S+ P + R+ Q DA L E+ +L+ L V +
Sbjct: 17 VSKQQALLPSSNAF-----SIFPKDHVLRIFQLDALVLQQELVEILQTTLFHVLDIPPLQ 71
Query: 70 GMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGP 129
F Y+ EL L+ L++R S+W + G+ L NL RDE L ++ L
Sbjct: 72 HFRFAYQEELVLVLDALLYRLSVWRMGQSIGDRLQNLVLRDEERARLLALQNTKSILPSL 131
Query: 130 GLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAAS 189
+ + + + ++ Y+ ++Q W R+ ++ + S
Sbjct: 132 APSRRLLLVHAIMTLVMPYVTRKVQRKVLEEGWEREPVTTARHRIAKALRYGVVTWSLLS 191
Query: 190 FLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLL-LP 248
N +FL TG+YR L+E+ L RLVY S M R + YMN+ + W + + L L
Sbjct: 192 LANTFNFLMTGKYRTLVERILSLRLVYGSQRMMRFTNLLYMNQHVQWQTWMSLFRALSLG 251
Query: 249 LLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCA- 307
+K++ S + S E+ C C P + + C HRYCYYCI++R
Sbjct: 252 RYFRRLMKSLSSVASSSALLSMNEN--LCSACHELPTVCQRS-NCGHRYCYYCIKSRLLD 308
Query: 308 --SAASFRCLRCNEPVVAI 324
S SFRC++C + V +
Sbjct: 309 SQSTGSFRCIKCGQAVHSC 327
>ref|XP_684073.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Danio rerio]
ref|XP_001343742.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Danio rerio]
Length = 321
Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats.
Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 22/304 (7%)
Query: 35 VAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWV 94
+ R++Q DA LD + ++ Q + F KPG+L EPEL A L+ L+WRF+I+
Sbjct: 28 SRVLRISQLDAFELDGALEQLVWSQFTQCFQHFKPGILTPVEPELKALLQLLLWRFTIYS 87
Query: 95 DKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQ 154
+ T G +L+N+RY++ + G + ++ PQK W+ + +VG ++ R
Sbjct: 88 NSATVGQSLLNIRYKNA----------LIPGQKYRPMSRPQKFWFALLTVGEKWFRER-- 135
Query: 155 SFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARL 214
S S F AR+ ++ + G+ KAAS +N L FL G + L E+ L +
Sbjct: 136 SHSLFLNHPAESN---ARKARKVLSILLGLTKAASLVNFLLFLQRGTFPTLTERLLGVQP 192
Query: 215 VYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVK----NILSPFAKDKSSST 270
V+ P R ++F+Y+NR+L+W+ F+E L+ LLPL+N +K + SP + + +
Sbjct: 193 VFSRPQGPRDINFQYLNRELLWHGFAEFLIFLLPLINVWKLKAGVSALFSPLSDLTGTQS 252
Query: 271 KEDT--VTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREG 328
E+T C IC P +P ++ C+H +CYYC+++ + F C +C I+
Sbjct: 253 SEETHLTECAICGEWPTMPH-SIGCKHVFCYYCVKSNVIADIYFTCPKCGAETGQIEPVR 311
Query: 329 VSSG 332
+ G
Sbjct: 312 LQVG 315
Searching..................................................done
Results from round 3
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
ref|NP_565222.1| TED3 (REVERSAL OF THE DET PHENOTYPE); prot... 402 e-110
gb|AAM61388.1| putative RING finger protein [Arabidopsis th... 401 e-110
emb|CAO45868.1| unnamed protein product [Vitis vinifera] 366 2e-99
ref|NP_001055075.1| Os05g0275700 [Oryza sativa (japonica cu... 365 2e-99
gb|AAF68113.1|AC010793_8 F20B17.23 [Arabidopsis thaliana] 360 1e-97
gb|EEH42793.1| peroxisomal biogenesis factor 2 [Paracoccidi... 333 1e-89
ref|XP_001265299.1| peroxisome biosynthesis protein (Peroxi... 331 3e-89
ref|XP_001816880.1| hypothetical protein [Aspergillus oryza... 331 3e-89
ref|XP_001781834.1| predicted protein [Physcomitrella paten... 331 4e-89
gb|EEH34726.1| peroxisomal biogenesis factor 2 [Paracoccidi... 329 2e-88
ref|XP_001269799.1| peroxisome biosynthesis protein (Peroxi... 327 8e-88
ref|XP_750106.1| peroxisome biosynthesis protein (Peroxin-2... 327 9e-88
ref|NP_974183.1| TED3 (REVERSAL OF THE DET PHENOTYPE); prot... 326 1e-87
ref|XP_001220945.1| hypothetical protein CHGG_01724 [Chaeto... 324 7e-87
ref|XP_661660.1| hypothetical protein AN4056.2 [Aspergillus... 323 1e-86
ref|XP_001398873.1| hypothetical protein An18g04150 [Asperg... 322 2e-86
ref|XP_001490672.1| PREDICTED: similar to Peroxisome assemb... 321 4e-86
ref|XP_001540740.1| peroxisomal biogenesis factor 2 [Ajello... 321 4e-86
ref|XP_964597.1| peroxisomal biogenesis factor 2 [Neurospor... 321 7e-86
ref|XP_001212277.1| peroxisomal biogenesis factor 2 [Asperg... 318 4e-85
ref|XP_380900.1| hypothetical protein FG00724.1 [Gibberella... 317 5e-85
gb|ABH11413.1| peroxin 2 [Penicillium chrysogenum] 317 7e-85
dbj|BAE27238.1| unnamed protein product [Mus musculus] 317 8e-85
gb|ABZ92521.1| peroxisomal membrane protein 3, 35kDa (Zellw... 316 1e-84
ref|NP_000309.1| peroxin 2 [Homo sapiens] >gi|121114290|ref... 316 1e-84
gb|EDL05216.1| peroxisomal membrane protein 3, isoform CRA_... 316 1e-84
gb|AAH00661.1| Peroxisomal membrane protein 3, 35kDa (Zellw... 315 2e-84
ref|NP_033020.2| peroxin 2 [Mus musculus] >gi|2623264|gb|AA... 315 3e-84
sp|P24392|PEX2_RAT Peroxisome assembly factor 1 (PAF-1) (Pe... 314 7e-84
ref|NP_058930.1| peroxin 2 [Rattus norvegicus] >gi|1109648|... 312 2e-83
gb|EAW87052.1| peroxisomal membrane protein 3, 35kDa (Zellw... 312 2e-83
ref|XP_544136.2| PREDICTED: similar to Peroxisome assembly ... 311 5e-83
ref|XP_001912471.1| unnamed protein product [Podospora anse... 310 1e-82
sp|Q06438|PEX2_CRIGR Peroxisome assembly factor 1 (PAF-1) (... 309 3e-82
ref|NP_001093818.1| peroxin 2 [Bos taurus] >gi|151554728|gb... 306 2e-81
sp|P55098|PEX2_MOUSE Peroxisome assembly factor 1 (PAF-1) (... 306 2e-81
ref|XP_368589.1| hypothetical protein MGG_00655 [Magnaporth... 306 2e-81
ref|XP_001377812.1| PREDICTED: similar to Peroxisome assemb... 305 3e-81
ref|XP_645304.1| RING Zn finger-containing protein [Dictyos... 304 5e-81
ref|XP_001559557.1| hypothetical protein BC1G_01713 [Botryo... 300 1e-79
ref|NP_001008454.1| peroxin 2 [Gallus gallus] >gi|53127700|... 298 3e-79
ref|XP_001593335.1| hypothetical protein SS1G_06257 [Sclero... 297 9e-79
ref|NP_001016841.1| peroxin 2 [Xenopus tropicalis] >gi|8927... 292 3e-77
gb|EDU43666.1| peroxisomal biogenesis factor 2 [Pyrenophora... 287 6e-76
gb|ACO64229.1| predicted protein [Micromonas sp. RCC299] 284 9e-75
gb|EAZ33629.1| hypothetical protein OsJ_017112 [Oryza sativ... 279 3e-73
ref|XP_519817.2| PREDICTED: peroxisomal membrane protein 3 ... 278 4e-73
ref|XP_684073.1| PREDICTED: similar to Peroxisome assembly ... 272 3e-71
ref|XP_820860.1| peroxin-2, putative [Trypanosoma cruzi str... 270 8e-71
emb|CAC59701.1| peroxin-2 [Trypanosoma brucei] 264 6e-69
ref|XP_843828.1| peroxin-2 [Trypanosoma brucei] >gi|6236026... 264 8e-69
ref|XP_001837282.1| hypothetical protein CC1G_00418 [Coprin... 263 2e-68
ref|XP_001565685.1| glycosome import protein [Leishmania br... 259 2e-67
ref|XP_001245152.1| hypothetical protein CIMG_04593 [Coccid... 258 3e-67
ref|XP_504845.1| YlPEX2 [Yarrowia lipolytica] >gi|54041949|... 257 1e-66
gb|AAB48828.1| Gim1 [Leishmania donovani] 256 2e-66
ref|XP_001466263.1| glycosome import protein (gim1) [Leishm... 255 3e-66
ref|XP_001790759.1| hypothetical protein SNOG_00062 [Phaeos... 254 1e-65
emb|CAL56641.1| putative peroxisome assembly protein 2 (ISS... 253 1e-65
gb|EAY97345.1| hypothetical protein OsI_018578 [Oryza sativ... 251 5e-65
gb|AAC49423.1| Pay5p 251 5e-65
ref|XP_001683984.1| glycosome import protein (gim1) [Leishm... 250 1e-64
ref|XP_001013694.1| Pex2 / Pex12 amino terminal region fami... 241 6e-62
ref|XP_457905.1| hypothetical protein DEHA0C05720g [Debaryo... 240 8e-62
emb|CAF97942.1| unnamed protein product [Tetraodon nigrovir... 238 4e-61
gb|ACF22776.1| ring finger protein [Brachypodium distachyon] 237 7e-61
ref|XP_001202188.1| PREDICTED: similar to peroxisomal membr... 232 4e-59
ref|XP_001421023.1| predicted protein [Ostreococcus lucimar... 231 5e-59
ref|XP_001483143.1| hypothetical protein PGUG_05098 [Pichia... 230 8e-59
ref|XP_714968.1| peroxisomal import RING finger complex com... 230 1e-58
ref|XP_001387892.2| peroxisome assembly protein (Peroxin-2)... 229 3e-58
ref|XP_001650927.1| peroxisomal membrane protein, putative ... 225 4e-57
ref|XP_309872.4| AGAP010836-PA [Anopheles gambiae str. PEST... 224 6e-57
ref|XP_001528114.1| conserved hypothetical protein [Loddero... 218 6e-55
ref|XP_001732474.1| hypothetical protein MGL_0249 [Malassez... 217 9e-55
ref|XP_756472.1| hypothetical protein UM00325.1 [Ustilago m... 217 1e-54
ref|XP_001876750.1| predicted protein [Laccaria bicolor S23... 215 4e-54
gb|AAT97412.1| peroxin 2 [Pichia angusta] 214 6e-54
ref|XP_001354095.1| GA20087-PA [Drosophila pseudoobscura] >... 213 1e-53
gb|AAL29060.2| LD46714p [Drosophila melanogaster] 213 1e-53
ref|XP_001846716.1| peroxisome assembly factor 1 [Culex pip... 213 1e-53
ref|NP_648210.1| CG7081 CG7081-PA [Drosophila melanogaster]... 211 5e-53
ref|XP_001605507.1| PREDICTED: similar to peroxisomal membr... 209 2e-52
ref|NP_502201.2| PeRoXisome assembly factor family member (... 196 2e-48
ref|XP_001089931.1| PREDICTED: similar to Peroxisome assemb... 193 2e-47
ref|XP_001670253.1| Hypothetical protein CBG06104 [Caenorha... 189 2e-46
gb|EEH57229.1| predicted protein [Micromonas pusilla CCMP1545] 185 3e-45
ref|XP_001353650.1| GA20642-PA [Drosophila pseudoobscura] >... 182 4e-44
emb|CAG46874.1| PEX10 [Homo sapiens] >gi|60822939|gb|AAX366... 177 1e-42
ref|NP_002608.1| peroxisome biogenesis factor 10 isoform 2 ... 175 3e-42
ref|XP_513729.2| PREDICTED: peroxisome biogenesis factor 10... 175 5e-42
ref|XP_566502.1| peroxisome assembly protein [Cryptococcus ... 174 8e-42
ref|XP_778153.1| hypothetical protein CNBA1530 [Cryptococcu... 174 9e-42
sp|Q01964|PEX2_PICPA Peroxisomal biogenesis factor 2 (Perox... 173 1e-41
ref|XP_001084130.1| PREDICTED: peroxisome biogenesis factor... 173 2e-41
ref|NP_647624.1| CG7864 CG7864-PA [Drosophila melanogaster]... 171 4e-41
ref|XP_001366320.1| PREDICTED: similar to Peroxisome biogen... 170 1e-40
ref|XP_417558.2| PREDICTED: similar to peroxisome biogenesi... 170 1e-40
ref|XP_001644639.1| hypothetical protein Kpol_526p34 [Vande... 168 6e-40
sp|Q8HXW8|PEX10_MACFA Peroxisome assembly protein 10 (Perox... 168 7e-40
ref|XP_001083901.1| PREDICTED: peroxisome biogenesis factor... 166 2e-39
ref|XP_454701.1| unnamed protein product [Kluyveromyces lac... 165 4e-39
ref|XP_309110.3| AGAP000928-PA [Anopheles gambiae str. PEST... 164 7e-39
ref|XP_001383970.2| hypothetical protein PICST_58365 [Pichi... 162 4e-38
ref|XP_972155.1| PREDICTED: similar to CG7864-PA [Tribolium... 162 4e-38
gb|AAQ04625.1|AF443186_1 peroxisome protein Pex2 [Paracocci... 161 4e-38
ref|XP_449723.1| hypothetical protein CAGL0M08690g [Candida... 161 8e-38
ref|XP_460760.1| hypothetical protein DEHA0F10087g [Debaryo... 158 7e-37
ref|NP_982853.1| ABL094Wp [Ashbya gossypii ATCC 10895] >gi|... 157 1e-36
ref|NP_985245.1| AER390Wp [Ashbya gossypii ATCC 10895] >gi|... 156 1e-36
ref|XP_001633055.1| predicted protein [Nematostella vectens... 155 5e-36
sp|Q00940|PEX10_PICAN Peroxisome assembly protein 10 (Perox... 155 5e-36
ref|XP_001024158.1| Pex2 / Pex12 amino terminal region fami... 152 4e-35
ref|NP_010551.1| C3HC4-type RING-finger peroxisomal membran... 150 1e-34
ref|XP_001347124.1| Peroxisome assembly protein, putative [... 150 1e-34
ref|XP_447524.1| hypothetical protein CAGL0I06292g [Candida... 150 2e-34
ref|XP_001873307.1| predicted protein [Laccaria bicolor S23... 149 2e-34
gb|AAS56114.1| YDR265W [Saccharomyces cerevisiae] 149 3e-34
gb|EDN60598.1| C3HC4 zinc-binding integral peroxisomal memb... 149 3e-34
ref|XP_001666372.1| hypothetical protein CBG21169 [Caenorha... 148 4e-34
sp|Q92265|PEX10_PICPA Peroxisome assembly protein 10 (Perox... 139 4e-31
ref|XP_001625262.1| predicted protein [Nematostella vectens... 136 2e-30
gb|ABQ22826.1| peroxisome assembly factor 1-like protein [C... 135 4e-30
ref|XP_001237561.2| AGAP010497-PA [Anopheles gambiae str. P... 135 7e-30
ref|XP_001657838.1| hypothetical protein AaeL_AAEL006463 [A... 130 2e-28
ref|XP_001193457.1| PREDICTED: similar to Peroxisomal membr... 130 2e-28
ref|NP_012325.1| RING-finger peroxin, peroxisomal membrane ... 129 3e-28
ref|XP_001646918.1| hypothetical protein Kpol_2000p24 [Vand... 125 4e-27
ref|XP_001356739.1| GA17579-PA [Drosophila pseudoobscura] >... 125 4e-27
gb|ABG78603.1| RING-1 [Gibberella zeae] 123 2e-26
ref|XP_001850439.1| peroxisome assembly protein 12 [Culex p... 119 2e-25
ref|XP_001120054.1| PREDICTED: similar to CG7864-PA [Apis m... 119 4e-25
ref|XP_387254.1| hypothetical protein FG07078.1 [Gibberella... 116 3e-24
ref|NP_608546.1| CG3639 CG3639-PA [Drosophila melanogaster]... 114 1e-23
ref|XP_001382813.2| hypothetical protein PICST_42357 [Pichi... 100 2e-19
ref|NP_594437.1| ubiquitin-protein ligase E3 (predicted) [S... 99 2e-19
ref|XP_001519317.1| PREDICTED: similar to peroxisomal membr... 96 4e-18
ref|XP_453090.1| unnamed protein product [Kluyveromyces lac... 92 6e-17
ref|XP_001753592.1| predicted protein [Physcomitrella paten... 89 4e-16
emb|CAO02572.1| peroxisomal membrane protein [Kluyveromyces... 89 5e-16
gb|AAF87890.1|AC012561_23 Similar tp transcription factors ... 89 6e-16
ref|NP_564568.1| SNF2 domain-containing protein / helicase ... 89 6e-16
gb|AAD50036.1|AC007980_1 Similar to transcription factors [... 89 6e-16
ref|XP_001382790.2| ATPase/DNA helicase [Pichia stipitis CB... 81 1e-13
ref|XP_001631481.1| predicted protein [Nematostella vectens... 79 5e-13
gb|AAH65891.1| LOC402959 protein [Danio rerio] 79 5e-13
ref|XP_001679591.1| Hypothetical protein CBG02634 [Caenorha... 75 7e-12
ref|XP_687960.2| PREDICTED: similar to bloodthirsty [Danio ... 75 8e-12
ref|XP_001691622.1| predicted protein [Chlamydomonas reinha... 75 8e-12
ref|XP_447681.1| hypothetical protein CAGL0I09988g [Candida... 75 9e-12
ref|XP_001341875.1| PREDICTED: similar to bloodthirsty [Dan... 75 1e-11
ref|XP_001873461.1| predicted protein [Laccaria bicolor S23... 75 1e-11
ref|XP_001310832.1| hypothetical protein TVAG_059670 [Trich... 74 1e-11
emb|CAL53461.1| FOG: FHA domain (ISS) [Ostreococcus tauri] 74 2e-11
ref|XP_683612.2| PREDICTED: hypothetical protein [Danio rerio] 73 3e-11
emb|CAN88303.1| novel protein similar to bloodthirsty (bty)... 73 3e-11
ref|XP_503872.1| hypothetical protein [Yarrowia lipolytica]... 73 4e-11
ref|NP_001035434.1| hypothetical protein LOC678596 [Danio r... 72 5e-11
ref|XP_001829342.1| hypothetical protein CC1G_00521 [Coprin... 72 5e-11
ref|XP_001342317.1| PREDICTED: similar to bloodthirsty [Dan... 72 7e-11
ref|NP_001016199.1| ring finger and WD repeat domain 2 [Xen... 72 7e-11
ref|XP_001345325.1| PREDICTED: similar to bloodthirsty [Dan... 72 7e-11
emb|CAO65958.1| unnamed protein product [Vitis vinifera] 71 8e-11
ref|XP_001653450.1| hypothetical protein AaeL_AAEL008854 [A... 71 9e-11
gb|AAH20845.1| RFWD2 protein [Homo sapiens] 71 9e-11
gb|AAI61699.1| Unknown (protein for IMAGE:5537244) [Xenopus... 71 1e-10
ref|YP_053107.1| ubiquitin E3 ligase ICP0 [Equid herpesviru... 71 1e-10
dbj|BAD91096.1| transcriptional activator [Equid herpesviru... 71 1e-10
ref|NP_045280.1| ubiquitin E3 ligase ICP0 [Equid herpesviru... 71 1e-10
dbj|BAD27395.1| transactivator protein [Equid herpesvirus 1] 71 1e-10
dbj|BAA95211.1| infected cell protein 0 [Canid herpesvirus 1] 71 1e-10
ref|NP_001005315.1| hypothetical protein LOC368754 [Danio r... 71 1e-10
dbj|BAD91098.1| transcriptional activator [Equid herpesviru... 71 1e-10
dbj|BAD91104.1| transcriptional activator [Equid herpesviru... 71 1e-10
dbj|BAD91106.1| transcriptional activator [Equid herpesviru... 71 1e-10
dbj|BAD91102.1| transcriptional activator [Equid herpesviru... 71 1e-10
ref|XP_317518.4| AGAP007954-PA [Anopheles gambiae str. PEST... 71 1e-10
gb|AAB63316.1| contains a deletion of 399 base pairs as com... 71 2e-10
ref|XP_644602.1| MEK1 interacting protein 1 [Dictyostelium ... 71 2e-10
ref|XP_001337492.1| PREDICTED: similar to bloodthirsty isof... 71 2e-10
ref|XP_001104719.1| PREDICTED: similar to ring finger and W... 70 2e-10
ref|XP_001104796.1| PREDICTED: similar to ring finger and W... 70 2e-10
ref|NP_001001740.1| ring finger and WD repeat domain 2 isof... 70 2e-10
ref|XP_001153038.1| PREDICTED: ring finger and WD repeat do... 70 2e-10
ref|NP_071902.2| ring finger and WD repeat domain 2 isoform... 70 2e-10
emb|CAF91134.1| unnamed protein product [Tetraodon nigrovir... 70 2e-10
ref|NP_986450.1| AGL217Wp [Ashbya gossypii ATCC 10895] >gi|... 70 2e-10
ref|NP_001099846.1| tripartite motif-containing 31 [Rattus ... 70 3e-10
ref|XP_001843035.1| RING finger protein 10 [Culex pipiens q... 70 3e-10
ref|XP_426628.2| PREDICTED: similar to constitutive photomo... 70 3e-10
gb|EAZ42729.1| hypothetical protein OsJ_026212 [Oryza sativ... 70 3e-10
gb|EAW90999.1| ring finger and WD repeat domain 2, isoform ... 70 3e-10
ref|NP_001046958.1| Os02g0516600 [Oryza sativa (japonica cu... 70 3e-10
emb|CAG10910.1| unnamed protein product [Tetraodon nigrovir... 70 3e-10
ref|XP_001897248.1| RING zinc finger protein [Brugia malayi... 70 4e-10
ref|XP_001418208.1| predicted protein [Ostreococcus lucimar... 70 4e-10
gb|AAM21558.1|AF446007_1 MEK1 interacting protein 1 [Dictyo... 70 4e-10
gb|EAZ23220.1| hypothetical protein OsJ_006703 [Oryza sativ... 70 4e-10
ref|XP_001332580.1| PREDICTED: similar to bloodthirsty [Dan... 70 4e-10
ref|XP_537181.2| PREDICTED: similar to constitutive photomo... 69 4e-10
Sequences not found previously or not previously below threshold:
ref|NP_722540.1| peroxisome biogenesis factor 10 isoform 1 ... 169 3e-40
ref|XP_001149278.1| PREDICTED: peroxisome biogenesis factor... 168 6e-40
ref|XP_001084009.1| PREDICTED: peroxisome biogenesis factor... 166 2e-39
ref|XP_001366381.1| PREDICTED: similar to Peroxisome biogen... 165 5e-39
ref|XP_546732.2| PREDICTED: similar to Peroxisome assembly ... 156 2e-36
ref|NP_001035866.1| peroxisome biogenesis factor 10 [Mus mu... 155 7e-36
ref|NP_001102875.1| peroxisome biogenesis factor 10 [Rattus... 153 2e-35
ref|XP_849155.1| PREDICTED: similar to peroxisome biogenesi... 150 2e-34
ref|XP_001495136.1| PREDICTED: similar to Peroxisome assemb... 135 6e-30
ref|NP_565621.1| PEX10 (PEROXIN 10); protein binding / zinc... 134 1e-29
ref|NP_001005994.1| peroxisome biogenesis factor 10 [Danio ... 133 1e-29
emb|CAB56484.1| peroxin 10 [Yarrowia lipolytica] 133 3e-29
ref|XP_501311.1| YlPEX10 [Yarrowia lipolytica] >gi|9049374|... 133 3e-29
emb|CAB87983.1| Pex10p [Arabidopsis thaliana] 132 3e-29
gb|AAM64667.1| putative peroxisome assembly protein PER8 [A... 132 3e-29
ref|XP_001517927.1| PREDICTED: similar to peroxisome biogen... 131 8e-29
ref|XP_001817227.1| hypothetical protein [Aspergillus oryza... 128 5e-28
gb|EEH39409.1| peroxisome assembly protein [Paracoccidioide... 127 1e-27
gb|EEH42464.1| peroxisome assembly protein [Paracoccidioide... 127 1e-27
ref|XP_001595000.1| hypothetical protein SS1G_04808 [Sclero... 126 3e-27
ref|XP_001273266.1| peroxisome biosynthesis protein (Peroxi... 125 5e-27
emb|CAF90846.1| unnamed protein product [Tetraodon nigrovir... 125 6e-27
ref|XP_749083.1| peroxisome biosynthesis protein (Peroxin-1... 124 9e-27
gb|EDP48266.1| peroxisome biosynthesis protein (Peroxin-10)... 124 1e-26
ref|XP_001213484.1| conserved hypothetical protein [Aspergi... 123 1e-26
ref|XP_001240364.1| hypothetical protein CIMG_07527 [Coccid... 123 2e-26
ref|XP_001777562.1| predicted protein [Physcomitrella paten... 122 3e-26
ref|NP_001060245.1| Os07g0608800 [Oryza sativa (japonica cu... 122 3e-26
emb|CAO43873.1| unnamed protein product [Vitis vinifera] 122 4e-26
ref|XP_001261348.1| peroxisome biosynthesis protein (Peroxi... 122 4e-26
ref|XP_001538776.1| conserved hypothetical protein [Ajellom... 122 5e-26
ref|NP_001021200.1| tryptophanyl (W) tRNA Synthetase family... 120 1e-25
ref|XP_001794244.1| hypothetical protein SNOG_03692 [Phaeos... 120 1e-25
ref|XP_001396221.1| hypothetical protein An13g00800 [Asperg... 120 1e-25
ref|XP_663285.1| hypothetical protein AN5681.2 [Aspergillus... 120 1e-25
gb|ABH11418.1| peroxin 10 [Penicillium chrysogenum] 119 2e-25
ref|XP_001900656.1| tryptophanyl-tRNA synthetase family pro... 111 6e-23
gb|EDL14990.1| mCG3937, isoform CRA_a [Mus musculus] 111 7e-23
gb|AAM14959.1| putative peroxisome assembly protein PER8 [A... 110 1e-22
ref|XP_640208.2| RING Zn finger-containing protein [Dictyos... 109 3e-22
ref|XP_001485839.1| hypothetical protein PGUG_01510 [Pichia... 106 3e-21
ref|XP_001603940.1| PREDICTED: similar to CG7864-PA [Nasoni... 105 5e-21
ref|NP_001069801.1| peroxisome biogenesis factor 10 [Bos ta... 99 6e-19
ref|XP_572386.1| peroxisome assembly protein per8 (peroxin-... 98 8e-19
ref|XP_001653526.1| ring finger protein [Aedes aegypti] >gi... 98 9e-19
gb|EDU45259.1| peroxisome assembly protein 10 [Pyrenophora ... 94 1e-17
ref|XP_772343.1| hypothetical protein CNBL2110 [Cryptococcu... 89 5e-16
ref|XP_001482977.1| hypothetical protein PGUG_04932 [Pichia... 87 1e-15
emb|CAN71793.1| hypothetical protein [Vitis vinifera] 87 2e-15
ref|XP_758788.1| hypothetical protein UM02641.1 [Ustilago m... 86 5e-15
gb|AAK55784.1|AC079038_18 Putative zinc-binding peroxisomal... 85 8e-15
ref|XP_001221066.1| hypothetical protein CHGG_01845 [Chaeto... 81 1e-13
ref|XP_001730285.1| hypothetical protein MGL_2667 [Malassez... 80 3e-13
ref|XP_456395.1| hypothetical protein DEHA0A01683g [Debaryo... 80 3e-13
gb|EAZ04670.1| hypothetical protein OsI_025902 [Oryza sativ... 79 4e-13
ref|XP_820856.1| peroxisome assembly protein, putative [Try... 78 7e-13
ref|XP_001466270.1| hypothetical protein LinJ25.2410 [Leish... 78 1e-12
ref|XP_964203.1| hypothetical protein NCU03277 [Neurospora ... 78 1e-12
dbj|BAE87841.1| unnamed protein product [Macaca fascicularis] 77 2e-12
ref|XP_967344.1| PREDICTED: similar to Peroxisome assembly ... 77 2e-12
gb|ABB05506.1| PEX10 [Trypanosoma brucei] 76 4e-12
ref|XP_843835.1| peroxisome assembly protein, putative [Try... 76 5e-12
ref|XP_001565691.1| hypothetical protein LbrM25_V2.1880 [Le... 75 9e-12
ref|XP_719586.1| peroxisomal import complex protein Pex12 [... 74 1e-11
ref|XP_719458.1| peroxisomal import complex protein Pex12 [... 74 1e-11
ref|NP_000277.1| peroxisomal biogenesis factor 12 [Homo sap... 74 2e-11
ref|XP_548259.1| PREDICTED: similar to Peroxisome assembly ... 74 2e-11
ref|XP_698242.2| PREDICTED: similar to bloodthirsty [Danio ... 73 3e-11
ref|XP_691507.2| PREDICTED: similar to probable RING-B-box-... 73 4e-11
ref|NP_001076847.1| peroxisomal biogenesis factor 12 [Bos t... 73 4e-11
emb|CAF92535.1| unnamed protein product [Tetraodon nigrovir... 72 5e-11
ref|XP_638242.1| hypothetical protein DDBDRAFT_0186444 [Dic... 72 6e-11
ref|XP_001331326.1| PREDICTED: hypothetical protein [Danio ... 72 6e-11
ref|NP_001070134.1| hypothetical protein LOC767728 [Danio r... 72 6e-11
ref|XP_001536002.1| conserved hypothetical protein [Ajellom... 71 9e-11
emb|CAN82215.1| hypothetical protein [Vitis vinifera] 71 1e-10
ref|NP_001120951.1| hypothetical protein LOC100151764 [Dani... 71 1e-10
ref|NP_001035464.1| hypothetical protein LOC678629 [Danio r... 71 1e-10
emb|CAN88304.1| novel protein similar to bloodthirsty (bty)... 71 1e-10
ref|XP_001503983.1| PREDICTED: hypothetical protein [Equus ... 71 1e-10
ref|XP_001334108.1| PREDICTED: similar to bloodthirsty [Dan... 71 1e-10
ref|NP_595592.1| peroxisomal ubiquitin-protein ligase E3 (p... 71 2e-10
gb|AAI55144.1| LOC571141 protein [Danio rerio] 70 2e-10
ref|XP_001334609.1| PREDICTED: similar to bloodthirsty isof... 70 2e-10
ref|NP_001093511.1| hypothetical protein LOC571141 [Danio r... 70 2e-10
gb|EDL15699.1| peroxisomal biogenesis factor 12, isoform CR... 70 2e-10
ref|XP_001912620.1| unnamed protein product [Podospora anse... 70 2e-10
dbj|BAE38761.1| unnamed protein product [Mus musculus] >gi|... 70 2e-10
ref|XP_001358810.1| GA12398-PA [Drosophila pseudoobscura] >... 70 2e-10
ref|NP_598786.1| peroxisomal biogenesis factor 12 [Mus musc... 70 2e-10
emb|CAF97012.1| unnamed protein product [Tetraodon nigrovir... 70 2e-10
ref|NP_001108173.1| hypothetical protein LOC100137104 [Dani... 70 2e-10
ref|XP_001337335.1| PREDICTED: similar to bloodthirsty isof... 70 3e-10
ref|NP_001116523.1| hypothetical protein LOC100144555 [Dani... 70 3e-10
ref|NP_001093537.1| hypothetical protein LOC100000030 [Dani... 70 3e-10
ref|XP_001337416.1| PREDICTED: similar to bloodthirsty isof... 70 3e-10
ref|NP_001018311.1| bloodthirsty [Danio rerio] >gi|42741822... 70 3e-10
ref|NP_001107915.1| hypothetical protein LOC571162 [Danio r... 70 4e-10
ref|NP_651214.1| CG13605 CG13605-PA [Drosophila melanogaste... 70 4e-10
ref|XP_001683991.1| hypothetical protein, conserved [Leishm... 70 4e-10
>ref|NP_565222.1| TED3 (REVERSAL OF THE DET PHENOTYPE); protein binding / zinc ion
binding [Arabidopsis thaliana]
sp|Q9CA86|PEX2_ARATH Peroxisome assembly protein 2 (Peroxin-2) (AthPEX2) (Pex2p)
gb|AAG52254.1|AC011717_22 putative RING finger protein; 84236-82024 [Arabidopsis thaliana]
gb|AAL36419.1| unknown protein [Arabidopsis thaliana]
gb|AAM20014.1| unknown protein [Arabidopsis thaliana]
Length = 333
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 333/333 (100%), Positives = 333/333 (100%)
Query: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL
Sbjct: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
Query: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG
Sbjct: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
Query: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR
Sbjct: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
Query: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS
Sbjct: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
Query: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY 300
EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY
Sbjct: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY 300
Query: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
>gb|AAM61388.1| putative RING finger protein [Arabidopsis thaliana]
Length = 333
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 332/333 (99%), Positives = 332/333 (99%)
Query: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL
Sbjct: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
Query: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG
Sbjct: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
Query: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR
Sbjct: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
Query: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS
Sbjct: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
Query: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYY 300
EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIP IALPCQHRYCYY
Sbjct: 241 EMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPXIALPCQHRYCYY 300
Query: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 301 CIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
>emb|CAO45868.1| unnamed protein product [Vitis vinifera]
Length = 346
Score = 366 bits (939), Expect = 2e-99, Method: Composition-based stats.
Identities = 248/319 (77%), Positives = 287/319 (89%), Gaps = 2/319 (0%)
Query: 8 DDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLM 67
+DAW+ +YQRL P+ QS S++S IPV+ISRVNQ DAARLD+E+SAMLKEQLVKVF+LM
Sbjct: 18 EDAWVHTYQRLQPQWQSFSLSQQSTIPVSISRVNQVDAARLDIEISAMLKEQLVKVFSLM 77
Query: 68 KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLE 127
KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGN LMNLRYRDER + GKVRTGLE
Sbjct: 78 KPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNGLMNLRYRDERTMEL--RGKVRTGLE 135
Query: 128 GPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKA 187
GPGLT QKIWYCVA+VGGQY+++RLQSFSAFRRWGDSEQR +ARR W ++QRIEG+YKA
Sbjct: 136 GPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDSEQRSVARRAWIMIQRIEGLYKA 195
Query: 188 ASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLL 247
ASF NLL FL+TGRYRNLIE+AL+ARLVY SP+MNR+VSFEYMNRQLVWNEFSEMLLLLL
Sbjct: 196 ASFSNLLIFLFTGRYRNLIERALQARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLL 255
Query: 248 PLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCA 307
PLLNSS+++N L PF+K+KSSS++ D CPICQ P IPF+ALPC+HRYCYYC+RTRCA
Sbjct: 256 PLLNSSSIRNFLRPFSKNKSSSSEGDETACPICQASPTIPFLALPCEHRYCYYCLRTRCA 315
Query: 308 SAASFRCLRCNEPVVAIQR 326
+A+SFRC+RC+EPVVA+QR
Sbjct: 316 AASSFRCIRCSEPVVAMQR 334
>ref|NP_001055075.1| Os05g0275700 [Oryza sativa (japonica cultivar-group)]
gb|AAT85132.1| putative peroxisome assembly protein 2 [Oryza sativa (japonica
cultivar-group)]
dbj|BAF16989.1| Os05g0275700 [Oryza sativa (japonica cultivar-group)]
Length = 342
Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats.
Identities = 237/322 (73%), Positives = 275/322 (85%), Gaps = 1/322 (0%)
Query: 9 DAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK 68
DAW Y+RLLP+ +S+ S + IP++ISRVNQFDAARLDVEMSAMLKEQLVKVF+L+K
Sbjct: 22 DAWAAEYRRLLPQWESMRDSSKIAIPISISRVNQFDAARLDVEMSAMLKEQLVKVFSLVK 81
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEG 128
PG+LFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDER +VRTGLEG
Sbjct: 82 PGLLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAA-PITGKEVRTGLEG 140
Query: 129 PGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAA 188
PGL+ QK+ YC+++VGGQY++SRLQSFSAFRRWGDSEQRPLARR W LVQ EG+Y+A+
Sbjct: 141 PGLSVSQKVLYCISTVGGQYIWSRLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRAS 200
Query: 189 SFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLP 248
SF NLL FLY RY+ ++E+ LKARLVY SP+MNR+VSFEYMNRQLVWNEFSEMLLLLLP
Sbjct: 201 SFFNLLLFLYGARYKTIVERILKARLVYESPNMNRAVSFEYMNRQLVWNEFSEMLLLLLP 260
Query: 249 LLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCAS 308
LLNSS+VK L PF+KDKS+S+ D CPIC+ P+IPF ALPCQHRYCYYC++TRCA+
Sbjct: 261 LLNSSSVKKFLLPFSKDKSASSSGDEADCPICRSSPSIPFEALPCQHRYCYYCLQTRCAA 320
Query: 309 AASFRCLRCNEPVVAIQREGVS 330
S+RC RCNE VVAIQR+G S
Sbjct: 321 TNSYRCARCNEIVVAIQRQGSS 342
>gb|AAF68113.1|AC010793_8 F20B17.23 [Arabidopsis thaliana]
Length = 389
Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats.
Identities = 323/394 (81%), Positives = 325/394 (82%), Gaps = 66/394 (16%)
Query: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL
Sbjct: 1 MTPSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQL 60
Query: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG
Sbjct: 61 VKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLG 120
Query: 121 KVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 180
K GLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR
Sbjct: 121 K---GLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQR 177
Query: 181 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS
Sbjct: 178 IEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 237
Query: 241 EMLLLLLPLL---------------------------------------------NSSAV 255
+ LL P + NSSAV
Sbjct: 238 --VGLLYPSIDQNILFRLATRNVMLGSDFLVLFWHSALNLFGDIQEMLLLLLPLLNSSAV 295
Query: 256 KNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQH----------------RYCY 299
KNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQH RYCY
Sbjct: 296 KNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHSMCCSCYIHLKELTCRRYCY 355
Query: 300 YCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
YCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 356 YCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 389
>gb|EEH42793.1| peroxisomal biogenesis factor 2 [Paracoccidioides brasiliensis
Pb18]
Length = 488
Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats.
Identities = 99/371 (26%), Positives = 150/371 (40%), Gaps = 68/371 (18%)
Query: 3 PSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVK 62
P + DA + + + R P RV Q DA LD E+ +LK Q+ +
Sbjct: 45 PLSRVSDAGVILWD--------TIKGREGTKPAF--RVGQVDAELLDEELLTLLKGQVGE 94
Query: 63 VFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKV 122
+ + E+ L ++++ S+W + G AL NL+Y D R
Sbjct: 95 GLKYFGSHIKEDWTHEIQFALRAILFKLSVWDHNASYGAALQNLKYTDSRQKGPT----- 149
Query: 123 RTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIE 182
T QK Y + +VGG+Y++ + +S+ + G E R L + I
Sbjct: 150 -----LSDPTKSQKALYGLFTVGGRYIWDKWESWLIDQEGGYDEPSTQIRLLSRITNTIS 204
Query: 183 GIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEM 242
+ ASF++ L FL GRYR LI++ L+ RL ++R VSFEY+NRQLVW+ F+E
Sbjct: 205 TTHSIASFVSFLVFLTNGRYRTLIDRLLRMRLAPPFTQVSREVSFEYLNRQLVWHAFTEF 264
Query: 243 LLLLLPLLNSSAVKNILSPFAKDKSSSTKE------------------DTVTCPIC---- 280
LL LLPL+ + ++ + SS + TCPIC
Sbjct: 265 LLFLLPLVGIGRWRRWITRAWRKTMSSLRTADEGNDEQVKAQGGLAFLPERTCPICYQEQ 324
Query: 281 ------------------------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRC 314
Q D P+ +PC YC+ CI + + C
Sbjct: 325 NPAARSENDVLGASGASGGIIGSAQTDVVNPYETMPCGCIYCFVCIAEKLEAEEGEGWIC 384
Query: 315 LRCNEPVVAIQ 325
LRC E V +
Sbjct: 385 LRCGEIVKKCK 395
>ref|XP_001265299.1| peroxisome biosynthesis protein (Peroxin-2), putative [Neosartorya
fischeri NRRL 181]
gb|EAW23402.1| peroxisome biosynthesis protein (Peroxin-2), putative [Neosartorya
fischeri NRRL 181]
Length = 479
Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats.
Identities = 104/373 (27%), Positives = 149/373 (39%), Gaps = 68/373 (18%)
Query: 16 QRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQY 75
Q + S+ R P RV Q DA LD E+ +LK Q+ P + +
Sbjct: 54 QSGVTLWNSI-KGREGSRPAF--RVGQVDAELLDEELLGLLKGQVGNALKYFGPQLREDW 110
Query: 76 EPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQ 135
E+ L ++++ SIW + G AL LRY D R H T Q
Sbjct: 111 SHEIQFALRAILFKLSIWDHNASYGAALQGLRYVDSRSKGPVHST----------PTKWQ 160
Query: 136 KIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLS 195
K Y + +VGG+Y + + +S+ + G E R L L + + A+F++ L
Sbjct: 161 KSLYGLLTVGGRYAWEKWESWLIGQEGGYEEPSRDVRMLARLTDLVSTTHSIAAFVSFLV 220
Query: 196 FLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAV 255
FL GRYR LI++ L+ RL S R VSFEY+NRQLVW+ F+E LL LLPL+ S
Sbjct: 221 FLVNGRYRTLIDRILRIRLTPPSAQSAREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRW 280
Query: 256 KNILSPFAKDKSSSTKE-----------------DTVTCPIC------------------ 280
+ LS + S+ + TC IC
Sbjct: 281 RRWLSRAWRKTISAIRSRDDDEDEVEKRGELAFLPERTCAICYKDQNPASTSENDIIAAS 340
Query: 281 --------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ----- 325
Q D P+ +PC YC+ C+ + + CLRC E V +
Sbjct: 341 AGGIVGSAQTDITNPYETVPCGCIYCFVCLVQKVEGEEGEGWICLRCGEIVKKCKPWNGD 400
Query: 326 -----REGVSSGK 333
R + GK
Sbjct: 401 VLEEVRPSTTPGK 413
>ref|XP_001816880.1| hypothetical protein [Aspergillus oryzae RIB40]
dbj|BAE54878.1| unnamed protein product [Aspergillus oryzae]
Length = 516
Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats.
Identities = 105/374 (28%), Positives = 150/374 (40%), Gaps = 70/374 (18%)
Query: 17 RLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYE 76
L + R P RV Q DA LD E+ +LK Q+ P +
Sbjct: 102 SGLSFWN-TIKGREGNRPAF--RVGQVDAELLDEELLGLLKGQVGNALKYFGPQAREDWS 158
Query: 77 PELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQK 136
E+ L ++++ SIW + G AL NL+Y D R H T QK
Sbjct: 159 HEIQFALRAILFKLSIWDHNASYGAALQNLKYVDTRSKGPIH----------SAPTKWQK 208
Query: 137 IWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSF 196
Y + +VGG+Y + + +S+ + G E R L + I + A+F++ L F
Sbjct: 209 SLYGLLTVGGRYAWEKWESWLINQEGGYDEPSREVRILARMTDLISTTHSIAAFISFLVF 268
Query: 197 LYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVK 256
L GRYR L+++ L+ RL S +R VSFEY+NRQLVW+ F+E LL LLPL+ S +
Sbjct: 269 LVNGRYRTLVDRILRIRLTPPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRWR 328
Query: 257 NILSPFAKDKSSSTKED-----------------TVTCPIC------------------- 280
+S + SS + TC IC
Sbjct: 329 RWISRAWRRTMSSIRSSDGDSEEAEKQGELAFLPERTCAICYKASNPESATESEVIAASA 388
Query: 281 ---------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ---- 325
Q D P+ A+PC YC+ C+ + + CLRC E V +
Sbjct: 389 ASGGILGSAQTDITNPYEAIPCGCVYCFVCLVQKVEGEEGEGWICLRCGEIVKKCKPWHG 448
Query: 326 ------REGVSSGK 333
R SSGK
Sbjct: 449 DVLEEARPQSSSGK 462
>ref|XP_001781834.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ53388.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 356
Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats.
Identities = 179/327 (54%), Positives = 238/327 (72%), Gaps = 3/327 (0%)
Query: 9 DAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK 68
DAW+++++ + P+ + + A ++V V I RVNQ DAARLDVEM+ MLKEQL +VF+L +
Sbjct: 18 DAWLQAWRAIAPQWEQIRAKVKTVPDVPILRVNQIDAARLDVEMTGMLKEQLSRVFSLSQ 77
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVV--AQHLGKVRTGL 126
PG+L +YEPEL+AFLEFL+WRFSIWVDKPTPGNALMNLRYR+ER + VRTGL
Sbjct: 78 PGLLLRYEPELNAFLEFLVWRFSIWVDKPTPGNALMNLRYRNERSFNTYLKFGKAVRTGL 137
Query: 127 EGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYK 186
EG GLT QKI YC+ VGG+Y ++RLQ SAF+RWGD ++ ARR W L+Q+ E +YK
Sbjct: 138 EGAGLTKTQKILYCLLVVGGRYAWARLQLISAFQRWGDRQRTSWARRAWLLLQKAESLYK 197
Query: 187 AASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLL 246
A F NL+ FL++GRY + +E+ L ARLVY P MNR+VSFEYMNRQLVW+EFSE+LLL+
Sbjct: 198 IAGFANLVLFLHSGRYPSTVERLLGARLVYEKPDMNRAVSFEYMNRQLVWHEFSELLLLI 257
Query: 247 LPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQV-DPAIPFIALPCQHRYCYYCIRTR 305
LPLLN +++ +L ++ ++ CPIC+ P++ALPC H YCYYC+RTR
Sbjct: 258 LPLLNMMSIRKVLMFPFSTQAPASSLPEDACPICEACPIVTPYMALPCCHLYCYYCLRTR 317
Query: 306 CASAASFRCLRCNEPVVAIQREGVSSG 332
S + +C RC+ VVA++R V +G
Sbjct: 318 SLSDRNLKCSRCSVSVVALKRYQVEAG 344
>gb|EEH34726.1| peroxisomal biogenesis factor 2 [Paracoccidioides brasiliensis
Pb01]
Length = 488
Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats.
Identities = 100/371 (26%), Positives = 151/371 (40%), Gaps = 68/371 (18%)
Query: 3 PSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVK 62
P + DA + + + R P RV Q DA LD E+ +LK Q+ +
Sbjct: 45 PLSRVSDAGVILWD--------TIKGREGTKPAF--RVGQVDAELLDEELLTLLKGQVGE 94
Query: 63 VFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKV 122
+ + E+ L ++++ S+W + G AL NL+Y D R
Sbjct: 95 GLKYFGSHIKEDWTHEIQFALRAILFKLSVWDHNASYGAALQNLKYTDSRQKGPT----- 149
Query: 123 RTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIE 182
T QK Y + +VGG+Y++ + +S+ + G +E P R L + I
Sbjct: 150 -----LSDPTKWQKALYGLYTVGGRYIWDKWESWLIDQEGGYNEPSPQIRLLSRITNTIS 204
Query: 183 GIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEM 242
+ ASF++ L FL GRYR LI++ L+ RL S ++R VSFEY+NRQLVW+ F+E
Sbjct: 205 TTHSIASFVSFLVFLTNGRYRTLIDRLLRMRLAPPSTQVSREVSFEYLNRQLVWHAFTEF 264
Query: 243 LLLLLPLLNSSAVKNILSPFAKDKSSSTKE------------------DTVTCPIC---- 280
LL LLPL+ + +S + S + CPIC
Sbjct: 265 LLFLLPLVGIGRWRRWISRAWRKTMLSLRTADEGDDEQVKAQGELAFLPERACPICYQEQ 324
Query: 281 ------------------------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRC 314
Q D P+ +PC YC+ CI + + C
Sbjct: 325 NPAARSENDVLGASGGSGGIIGSAQTDVVNPYETMPCGCIYCFVCIAEKLEAEEGEGWIC 384
Query: 315 LRCNEPVVAIQ 325
LRC E V +
Sbjct: 385 LRCGEIVKKCK 395
>ref|XP_001269799.1| peroxisome biosynthesis protein (Peroxin-2), putative [Aspergillus
clavatus NRRL 1]
gb|EAW08373.1| peroxisome biosynthesis protein (Peroxin-2), putative [Aspergillus
clavatus NRRL 1]
Length = 486
Score = 327 bits (838), Expect = 8e-88, Method: Composition-based stats.
Identities = 106/373 (28%), Positives = 148/373 (39%), Gaps = 68/373 (18%)
Query: 16 QRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQY 75
Q S+ R P RV Q DA LD E+ +LK Q+ P + +
Sbjct: 54 QSGFTLWNSIKG-REGNRPAF--RVGQVDAELLDEELLGLLKNQVGDALKYFGPQLREDW 110
Query: 76 EPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQ 135
E+ L L+++ SIW + G AL LRY D R H T Q
Sbjct: 111 SHEIQFVLRALLFKLSIWDHNASYGAALQGLRYVDCRSKGPVHST----------PTRWQ 160
Query: 136 KIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLS 195
K Y + +VGG+Y + + +S+ + G E R L + I + A+F + L
Sbjct: 161 KTIYGLLTVGGRYAWEKWESWLINQEGGYEEPSREVRMLSRMTDLISTTHSIAAFTSFLV 220
Query: 196 FLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAV 255
FL GRYR L+++ L+ RL S R VSFEY+NRQLVW+ F+E LL LLPL+ S
Sbjct: 221 FLVNGRYRTLVDRILRIRLTPPSAQSAREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRW 280
Query: 256 KNILSPFAKDKSSSTKED-----------------TVTCPIC------------------ 280
+ LS + S+ + TC IC
Sbjct: 281 RRWLSRVWRKMISAIRSSGDDDEPVEKQGELAYLPERTCAICYKDQNPTSTSENEVMAAS 340
Query: 281 --------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ----- 325
Q D P+ +PC YC+ C+ + + CLRC E V Q
Sbjct: 341 SGGIVGSAQTDITNPYETIPCGCIYCFVCLVQKVEGEEGEGWVCLRCGEIVKRCQPWNGD 400
Query: 326 -----REGVSSGK 333
R +SGK
Sbjct: 401 VLEEARTHSTSGK 413
>ref|XP_750106.1| peroxisome biosynthesis protein (Peroxin-2) [Aspergillus fumigatus
Af293]
gb|EAL88068.1| peroxisome biosynthesis protein (Peroxin-2), putative [Aspergillus
fumigatus Af293]
gb|EDP55700.1| peroxisome biosynthesis protein (Peroxin-2), putative [Aspergillus
fumigatus A1163]
Length = 479
Score = 327 bits (838), Expect = 9e-88, Method: Composition-based stats.
Identities = 104/373 (27%), Positives = 150/373 (40%), Gaps = 68/373 (18%)
Query: 16 QRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQY 75
Q + S+ R P RV Q DA LD E+ +LK Q+ P + +
Sbjct: 54 QSGVTLWNSIKG-REGSRPAF--RVGQVDAELLDEELLGLLKGQVGNALKYFGPQLREDW 110
Query: 76 EPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQ 135
E+ L ++++ SIW + G AL LRY D R H T Q
Sbjct: 111 SHEIQFALRAILFKLSIWDHNASYGAALQGLRYVDSRSKGPVHST----------PTKWQ 160
Query: 136 KIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLS 195
K Y + +VGG+Y + + +S+ + G E R L L + + A+F++ L
Sbjct: 161 KSLYGLLTVGGRYAWEKWESWLISQEGGYEEPSRDVRMLARLTGLVSTTHSIAAFVSFLV 220
Query: 196 FLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAV 255
FL GRYR L+++ L+ RL S R VSFEY+NRQLVW+ F+E LL LLPL+ S
Sbjct: 221 FLVNGRYRTLVDRILRIRLTPPSAQSAREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRW 280
Query: 256 KNILSPFAKDKSSSTKE-----------------DTVTCPIC------------------ 280
+ LS + S+ + TC IC
Sbjct: 281 RRWLSRAWRKAISAIRSRDDDEVEVEKRGELAFLPERTCAICYKDQNPASTSENDIITAS 340
Query: 281 --------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ----- 325
Q D P+ +PC YC+ C+ + + CLRC E V +
Sbjct: 341 AGGIVGSAQTDITNPYETVPCGCIYCFVCLVQKVEGEEGEGWICLRCGEIVKKCKPWNGD 400
Query: 326 -----REGVSSGK 333
R +SGK
Sbjct: 401 VLEEVRPSTTSGK 413
>ref|NP_974183.1| TED3 (REVERSAL OF THE DET PHENOTYPE); protein binding / zinc ion
binding [Arabidopsis thaliana]
Length = 282
Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats.
Identities = 282/282 (100%), Positives = 282/282 (100%)
Query: 52 MSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDE 111
MSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDE
Sbjct: 1 MSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDE 60
Query: 112 RGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLA 171
RGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLA
Sbjct: 61 RGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLA 120
Query: 172 RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMN 231
RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMN
Sbjct: 121 RRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMN 180
Query: 232 RQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIAL 291
RQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIAL
Sbjct: 181 RQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIAL 240
Query: 292 PCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 333
PCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK
Sbjct: 241 PCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVSSGK 282
>ref|XP_001220945.1| hypothetical protein CHGG_01724 [Chaetomium globosum CBS 148.51]
gb|EAQ93489.1| hypothetical protein CHGG_01724 [Chaetomium globosum CBS 148.51]
Length = 597
Score = 324 bits (830), Expect = 7e-87, Method: Composition-based stats.
Identities = 96/366 (26%), Positives = 152/366 (41%), Gaps = 70/366 (19%)
Query: 17 RLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK-------- 68
L ++ + R P RV Q DA LD E+ +L+ Q+ +
Sbjct: 120 STLSLWDAI-SGREGTRPAF--RVGQVDAELLDEELVGLLRGQVGDALRYVGGGVGGGGG 176
Query: 69 -------PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGK 121
+L +E E+ L ++++ ++W T G AL NLRY D R
Sbjct: 177 GAGGAGGSAVLHDWEAEVSLVLRAVLFKLTVWDHDATYGAALQNLRYTDAR--------- 227
Query: 122 VRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRI 181
R G + QK Y + +VGG+YL+++ + + + G P A+RL +
Sbjct: 228 -RDGPGLVPPSKWQKSLYGLVTVGGRYLWAKWEDWLLEQDDGFQGPSPGAQRLARWSSML 286
Query: 182 EGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSE 241
++ +A+F + L FL GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E
Sbjct: 287 STMHASAAFASFLVFLLHGRYRTLLDRVLRMRLAPPTSQVSREVSFEYLNRQLVWHAFTE 346
Query: 242 MLLLLLPLLNSSAVKNILSPFAKDKSSSTKED---------------TVTCPIC------ 280
LL +LPL+ + + L+ + TC IC
Sbjct: 347 FLLFVLPLVGINRWRRWLARTWRKTKKIMTTGAEGADEKKGEYSFLPERTCAICYQDQNS 406
Query: 281 -------------------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNE 319
Q D P+ +PC YC+ C+ TR + CLRC E
Sbjct: 407 VSSENDLMAATSSGVVGSAQTDITNPYATIPCGCIYCFVCLTTRIEREEGEGWSCLRCGE 466
Query: 320 PVVAIQ 325
V +
Sbjct: 467 LVKECR 472
>ref|XP_661660.1| hypothetical protein AN4056.2 [Aspergillus nidulans FGSC A4]
gb|EAA58944.1| hypothetical protein AN4056.2 [Aspergillus nidulans FGSC A4]
Length = 444
Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats.
Identities = 99/359 (27%), Positives = 147/359 (40%), Gaps = 61/359 (16%)
Query: 15 YQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQ 74
+ L ++ R P RV Q DA LD E+ +LK Q+ P +
Sbjct: 53 SRSGLSIWDAIKG-REGTRPAF--RVGQVDAELLDEELLGLLKGQVGDALKYFGPHLRDD 109
Query: 75 YEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP 134
+ E+ L ++++ SIW + G AL +L+Y D R H T
Sbjct: 110 WSHEIQFVLRAILFKLSIWDHDASYGAALQSLKYVDSRSKGPVHST----------PTML 159
Query: 135 QKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLL 194
QK Y + +VGG+Y + + +S+ R G E P R L + + + A+F + L
Sbjct: 160 QKSLYGLLTVGGRYAWDKWESWLISREGGYEEPSPEVRSLSRITNFLSTTHSIAAFFSFL 219
Query: 195 SFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSA 254
FL GRYR LI++ L+ RL S +R VSFEY+NRQLVW+ F+E LL LLPL+ S
Sbjct: 220 IFLVDGRYRTLIDRLLRMRLTPPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGISR 279
Query: 255 VKNILSPFAKDKSSSTKED------------------TVTCPIC---------------- 280
+ +S + S+ + +C IC
Sbjct: 280 WRRWVSRAWRKAMSAIRSTSVDEDEVSEKQGELAFLPERSCAICYKANNTATTETEVIAA 339
Query: 281 ------------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ CI + + CLRC E V +
Sbjct: 340 ASSGAGGIIGSAQTDITNPYETIPCGCIYCFVCIVQKLEGEEGEGWVCLRCGELVKKCK 398
>ref|XP_001398873.1| hypothetical protein An18g04150 [Aspergillus niger]
emb|CAK43217.1| unnamed protein product [Aspergillus niger]
Length = 481
Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats.
Identities = 104/375 (27%), Positives = 152/375 (40%), Gaps = 70/375 (18%)
Query: 16 QRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQY 75
Q ++ R + P RV Q DA LD E+ +LK Q+ P + +
Sbjct: 54 QSGFSLWNAIRG-REGIRPAY--RVGQVDAELLDEELLGLLKGQVGDALKYYGPQLREDW 110
Query: 76 EPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQ 135
E+ L ++++ SIW + G AL NL+Y D R H T Q
Sbjct: 111 SHEIQFALRAILFKLSIWDHDASYGAALQNLKYIDSRSKGPVH----------SAPTKWQ 160
Query: 136 KIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLS 195
K Y + +VGG+Y + + +S+ + G E R L + + + A+F++ L
Sbjct: 161 KSLYGLLTVGGRYAWGKWESWLINQESGYEEPSQEVRMLARMTDLVSASHSIAAFVSFLV 220
Query: 196 FLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAV 255
FL GRYR L+++ L+ RL+ S +R VSFEY+NRQLVW+ +E LL LLPL+ S
Sbjct: 221 FLVNGRYRTLVDRVLRMRLIPPSAQASREVSFEYLNRQLVWHAMTEFLLFLLPLVGISRW 280
Query: 256 KNILSPFAKDKSSSTKED-----------------TVTCPIC------------------ 280
+ LS + S+ K TC IC
Sbjct: 281 RRWLSRLWRKTLSTLKSGSEDEEQTGKQGELAFLPERTCAICYKDNNPTSTTEGEAIAAS 340
Query: 281 ----------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ--- 325
Q D P+ +PC YC+ CI + + CLRC E V +
Sbjct: 341 ASSGGIVGSAQTDITNPYEIIPCGCIYCFVCIVQKLEGEEGEGWVCLRCGEIVKKCKPWN 400
Query: 326 -------REGVSSGK 333
R SSGK
Sbjct: 401 GDVLEETRPQSSSGK 415
>ref|XP_001490672.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Equus caballus]
Length = 305
Score = 321 bits (824), Expect = 4e-86, Method: Composition-based stats.
Identities = 91/312 (29%), Positives = 152/312 (48%), Gaps = 25/312 (8%)
Query: 26 LASRRS--VIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MASREEGTKRTSRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + QK+WY V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDFSPNP----------RYQPPSRNQKLWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR R+ V + GI K +N L FL G++
Sbjct: 111 IGGKWLEER--CYDLFRN----PHLASFRKAKQCVNFVVGILKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L R V+ P R V FEYMNR+++W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIRSVFCKPQNIREVGFEYMNREILWHGFAEFLIFLLPLINIQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D+ C +C P +P + C+H +CYYC+++ F C +C
Sbjct: 225 IPLTGAPNGDSTLATSGRQCSLCGEWPTMPH-TIGCEHIFCYYCVKSSFLYDMYFTCPKC 283
Query: 318 NEPVVAIQREGV 329
V ++Q
Sbjct: 284 GTEVHSLQPLKS 295
>ref|XP_001540740.1| peroxisomal biogenesis factor 2 [Ajellomyces capsulatus NAm1]
gb|EDN08070.1| peroxisomal biogenesis factor 2 [Ajellomyces capsulatus NAm1]
Length = 466
Score = 321 bits (824), Expect = 4e-86, Method: Composition-based stats.
Identities = 103/370 (27%), Positives = 152/370 (41%), Gaps = 67/370 (18%)
Query: 3 PSTPADDAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVK 62
P + A DA I + + R P RV Q DA LD E+ A+LK Q+ +
Sbjct: 45 PLSRASDAGILLWD--------TIKGREGTGPAF--RVGQVDAELLDEELLALLKGQVGE 94
Query: 63 VFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKV 122
+ + E+ L ++++ S+W + G AL NL+Y D R
Sbjct: 95 GLKYFGTHIKEDWTHEIQFALRAILFKLSVWDHNASYGAALQNLKYTDSRKRSPT----- 149
Query: 123 RTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIE 182
T QK Y + +VGG+Y + + +S+ + G E R L + + I
Sbjct: 150 -----LSDPTKWQKSLYGIFTVGGRYAWDKWESWLIDQEGGYDEPPSQVRLLSRVTKVIS 204
Query: 183 GIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEM 242
+ A F++ L FL GRYR LI++ L+ RL S ++R VSFEY+NRQLVW+ F+E
Sbjct: 205 TTHSIAGFISFLVFLTNGRYRTLIDRVLRMRLAPPSTQVSREVSFEYLNRQLVWHAFTEF 264
Query: 243 LLLLLPLLNSSAVKNILSPFAKDKSSSTKE-----------------DTVTCPIC----- 280
LL LLPL+ + +S + SS K TCPIC
Sbjct: 265 LLFLLPLVGIGRWRRWVSRAWRRTMSSLKAADEGAVQAKSKGDLAFLPERTCPICYQEKN 324
Query: 281 -----------------------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCL 315
Q D P+ +PC YC+ CI + + CL
Sbjct: 325 PTATSENEVLGASGALGGIIGSAQTDVVNPYETMPCGCVYCFVCIAEKLEAEEGEGWICL 384
Query: 316 RCNEPVVAIQ 325
RC + V +
Sbjct: 385 RCGDLVKQCK 394
>ref|XP_964597.1| peroxisomal biogenesis factor 2 [Neurospora crassa OR74A]
gb|EAA35361.1| peroxisomal biogenesis factor 2 [Neurospora crassa OR74A]
Length = 639
Score = 321 bits (822), Expect = 7e-86, Method: Composition-based stats.
Identities = 98/363 (26%), Positives = 153/363 (42%), Gaps = 67/363 (18%)
Query: 17 RLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPG----ML 72
L ++ +SR P RV Q DA LD E+ +L+ Q+ + G +
Sbjct: 96 STLSFWDAI-SSREGTRPAF--RVGQVDAELLDAELVDLLRTQVGDALKYIGGGVSSTLK 152
Query: 73 FQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLT 132
+++ E+ L ++++ +IW T G AL NLRY D R +G +
Sbjct: 153 DEWDAEILLILRAILFKLTIWDHDATYGAALQNLRYTDARK----------SGPVLQPPS 202
Query: 133 SPQKIWYCVASVGGQYLFSRLQSFSAFRRWGD----SEQRPLARRLWTLVQRIEGIYKAA 188
QK Y +VGG+YL+++ +++ P +RL L + I + A
Sbjct: 203 KLQKSLYGFVTVGGKYLWTKWETYLLDHDEASSYSVEGPNPNIQRLSRLTESIGTFHAFA 262
Query: 189 SFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLP 248
SF + L FL GRYR ++++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LP
Sbjct: 263 SFASFLVFLLHGRYRTILDRLLRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLP 322
Query: 249 LLNSSAVKNILSPFAKDKSSSTKED-----------------TVTCPIC----------- 280
L+ + + L+ + S TC IC
Sbjct: 323 LVGINRWRRWLARTWRRTKSMLTTSSTNDPTQNKGGEFAFLPERTCAICYQDQNSAKSEA 382
Query: 281 ----------------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVV 322
Q D P+ A+PC YC+ C+ TR + CLRC E V
Sbjct: 383 ELMAAASSSSGVVGSAQTDITNPYEAMPCGCVYCFVCVATRIEREEGEGWTCLRCGELVK 442
Query: 323 AIQ 325
+
Sbjct: 443 ECK 445
>ref|XP_001212277.1| peroxisomal biogenesis factor 2 [Aspergillus terreus NIH2624]
gb|EAU36373.1| peroxisomal biogenesis factor 2 [Aspergillus terreus NIH2624]
Length = 473
Score = 318 bits (816), Expect = 4e-85, Method: Composition-based stats.
Identities = 106/375 (28%), Positives = 152/375 (40%), Gaps = 70/375 (18%)
Query: 16 QRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQY 75
Q ++ R + P RV Q DA LD E+ +LK Q+ P + +
Sbjct: 54 QTGFSLWNAIRG-REGIRPAF--RVGQVDAELLDEELLGLLKNQVGDALKYYGPQLREDW 110
Query: 76 EPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQ 135
E+ L L+++ SIW + G AL L+Y D R H T Q
Sbjct: 111 SNEIQFALRALLFKLSIWDHDASYGAALQGLKYVDSRSKGPVHST----------PTKWQ 160
Query: 136 KIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLS 195
K Y + +VGG+Y + + +S+ + G E R L L + + A+F++ L
Sbjct: 161 KTLYGLLTVGGRYAWDKWESWLINQEGGYEEPSREVRLLSRLTDLVSTTHSIAAFISFLV 220
Query: 196 FLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAV 255
FL GRYR L+++ L+ RL S +R VSFEY+NRQLVW+ F+E LL LLPL+ S
Sbjct: 221 FLVNGRYRTLVDRILRIRLTPPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRW 280
Query: 256 KNILSPFAKDKS----SSTKEDTV-------------TCPIC------------------ 280
+ +S + SS ED TC IC
Sbjct: 281 RRWVSRAWRKTMATLKSSEDEDETVEKQGELAFLPERTCGICYQQNNPSSATESEAIAAS 340
Query: 281 ----------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ--- 325
Q D P+ A+PC YC+ C+ + + CLRC V +
Sbjct: 341 AASGGIIGSAQTDITNPYEAVPCGCVYCFVCLVQKIEGEEGEGWVCLRCGAVVKKCKPWN 400
Query: 326 -------REGVSSGK 333
R SSGK
Sbjct: 401 GDVLEEARPQSSSGK 415
>ref|XP_380900.1| hypothetical protein FG00724.1 [Gibberella zeae PH-1]
Length = 439
Score = 317 bits (814), Expect = 5e-85, Method: Composition-based stats.
Identities = 96/354 (27%), Positives = 151/354 (42%), Gaps = 57/354 (16%)
Query: 16 QRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQ- 74
R+ ++ ++R P RV Q DA LD+E+ +LK+Q+ + G L
Sbjct: 49 NRIGSAWDAV-STREGTRPAF--RVGQVDAELLDIELLDILKDQVSEGLKYFGGGHLHDD 105
Query: 75 YEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSP 134
+ E+ L ++++ ++W T G AL NL+Y D R GL +
Sbjct: 106 WSAEIMLALRAVLFKLTVWDHDATYGAALQNLKYTDARN----------DGLILKAPSKV 155
Query: 135 QKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLL 194
QK Y + +V G Y ++R + + G E P +RL I ++ AA+ ++ L
Sbjct: 156 QKSLYGLVTVFGNYAWTRWEDWLLEHDDGYDEPSPRLKRLSKFTSAISTVHSAAACVSFL 215
Query: 195 SFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSA 254
FL GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+
Sbjct: 216 VFLLHGRYRTLLDRILRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLIGIQR 275
Query: 255 VKNILSPFAKDKSSSTKED---------------TVTCPIC------------------- 280
+ L+ + + TC IC
Sbjct: 276 WRRWLTRTWRKTKDIIRTGPQEEGKANGEYAFLPERTCAICYQDQNNATSENEVMAAAAS 335
Query: 281 -------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ C+ TR + CLRC E V +
Sbjct: 336 SGVVGSAQTDITNPYETIPCGCVYCFVCLATRLEREEGEGWTCLRCGEHVKECK 389
>gb|ABH11413.1| peroxin 2 [Penicillium chrysogenum]
Length = 487
Score = 317 bits (813), Expect = 7e-85, Method: Composition-based stats.
Identities = 97/350 (27%), Positives = 141/350 (40%), Gaps = 59/350 (16%)
Query: 22 SQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDA 81
S+ R P RV Q DA LD E+ +LK Q+ P M + E+
Sbjct: 60 WNSIKG-RDGTRPAF--RVGQVDAELLDEELLGLLKGQVGDALKYFGPQMREDWSHEILF 116
Query: 82 FLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCV 141
L ++++ SIW + G AL L+Y D R T QK Y +
Sbjct: 117 ALRAILFKLSIWDHNASYGAALQGLKYTDSRSKGPV----------YASPTKWQKGIYGL 166
Query: 142 ASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+VGG+Y + + +S+ + G E R L L + + A+F++ L FL GR
Sbjct: 167 LTVGGRYAWDKWESWLVGQEGGYDEPSQDIRMLSGLTGILSTSHSIAAFVSFLVFLVNGR 226
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
YR L+++ L+ RL S +R VSFEY+NRQLVW+ F+E LL LLPL+ + ++
Sbjct: 227 YRTLVDRILRIRLAPPSAQASREVSFEYLNRQLVWHAFTEFLLFLLPLVGIGRWRRWIAR 286
Query: 262 FAKDKSSSTKED-----------------TVTCPIC------------------------ 280
+S + TC IC
Sbjct: 287 AWHKMVNSVRSSGDDDEIPEKQGELAFLPERTCAICYRDQNPTTTTESDAIAASASGGIV 346
Query: 281 ---QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ CI + + CLRC E V Q
Sbjct: 347 GSAQTDITNPYETVPCGCIYCFVCIVQKIEAEEGQGWSCLRCGEVVKKCQ 396
>dbj|BAE27238.1| unnamed protein product [Mus musculus]
Length = 305
Score = 317 bits (812), Expect = 8e-85, Method: Composition-based stats.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 24/312 (7%)
Query: 25 LLASRRSVIPV-AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ ++ + R++Q DA LD + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MTGKEENMQSANRVLRISQLDALELDKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + + QK+WY V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDSSLNLI----------YQPPSKTQKLWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + + + G+ K +N L FL G++
Sbjct: 111 IGGKWLEER--CYDLFRN----RHLASFGKAKQFMNFLVGLLKLGELINFLIFLQKGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D+ C +C P +P + C+H +CYYC+++ F C +C
Sbjct: 225 IPLTGAAGHDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCPKC 283
Query: 318 NEPVVAIQREGV 329
V ++Q
Sbjct: 284 GTEVHSVQPLKS 295
>gb|ABZ92521.1| peroxisomal membrane protein 3, 35kDa (Zellweger syndrome)
[synthetic construct]
Length = 305
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 89/312 (28%), Positives = 150/312 (48%), Gaps = 25/312 (8%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKNDFS----------PNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFRNHH----LASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQREGV 329
V ++Q
Sbjct: 284 GTEVHSLQPLKS 295
>ref|NP_000309.1| peroxin 2 [Homo sapiens]
ref|NP_001073336.1| peroxin 2 [Homo sapiens]
sp|P28328|PEX2_HUMAN Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3) (35 kDa peroxisomal membrane
protein) (RING finger protein 72)
gb|AAF97687.1|AF133826_1 35 kDa peroxisomal membrane protein [Homo sapiens]
gb|AAC12785.1| peroxisome assembly factor-1 [Homo sapiens]
gb|AAA60141.1| peroxisomal membrane protein
gb|AAH05375.1| Peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
gb|AAH93043.1| Peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
Length = 305
Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats.
Identities = 89/312 (28%), Positives = 150/312 (48%), Gaps = 25/312 (8%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKNDFS----------PNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFRNHH----LASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQREGV 329
V ++Q
Sbjct: 284 GTEVHSLQPLKS 295
>gb|EDL05216.1| peroxisomal membrane protein 3, isoform CRA_b [Mus musculus]
Length = 307
Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 150/312 (48%), Gaps = 24/312 (7%)
Query: 25 LLASRRSVIPV-AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ ++ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 3 MTGKEENMQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 62
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + + QK+WY V +
Sbjct: 63 WLFLWRFTIYSKNATVGQSVLNIQYKNDSSLNLI----------YQPPSKTQKLWYAVCT 112
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + + + G+ K +N L FL G++
Sbjct: 113 IGGKWLEER--CYDLFRN----RHLASFGKAKQFMNFLVGLLKLGELINFLIFLQKGKFA 166
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 167 TLTERLLGIHSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWC 226
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D+ C +C P +P + C+H +CYYC+++ F C +C
Sbjct: 227 IPLTGAAGHDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCPKC 285
Query: 318 NEPVVAIQREGV 329
V ++Q
Sbjct: 286 GTEVHSVQPLKS 297
>gb|AAH00661.1| Peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
Length = 305
Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats.
Identities = 89/312 (28%), Positives = 150/312 (48%), Gaps = 25/312 (8%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKNDFS----------PNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFRNHH----LASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGERPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQREGV 329
V ++Q
Sbjct: 284 GTEVHSLQPLKS 295
>ref|NP_033020.2| peroxin 2 [Mus musculus]
gb|AAB91465.1| peroxisome membrane protein PEX2 [Mus musculus]
gb|AAH12404.1| Peroxisomal membrane protein 3 [Mus musculus]
dbj|BAE30130.1| unnamed protein product [Mus musculus]
dbj|BAE31130.1| unnamed protein product [Mus musculus]
gb|EDL05215.1| peroxisomal membrane protein 3, isoform CRA_a [Mus musculus]
Length = 305
Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 150/312 (48%), Gaps = 24/312 (7%)
Query: 25 LLASRRSVIPV-AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ ++ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MTGKEENMQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + + QK+WY V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDSSLNLI----------YQPPSKTQKLWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + + + G+ K +N L FL G++
Sbjct: 111 IGGKWLEER--CYDLFRN----RHLASFGKAKQFMNFLVGLLKLGELINFLIFLQKGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D+ C +C P +P + C+H +CYYC+++ F C +C
Sbjct: 225 IPLTGAAGHDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCPKC 283
Query: 318 NEPVVAIQREGV 329
V ++Q
Sbjct: 284 GTEVHSVQPLKS 295
>sp|P24392|PEX2_RAT Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3)
emb|CAA41054.1| peroxisome assembly factor-1 [Rattus rattus]
dbj|BAA06306.1| peroxisome assembly factor-1 [Rattus norvegicus]
gb|AAH63169.1| Peroxisomal membrane protein 3 [Rattus norvegicus]
gb|EDM01038.1| peroxisomal membrane protein 3, isoform CRA_a [Rattus norvegicus]
gb|EDM01039.1| peroxisomal membrane protein 3, isoform CRA_a [Rattus norvegicus]
gb|EDM01040.1| peroxisomal membrane protein 3, isoform CRA_a [Rattus norvegicus]
prf||1706355A peroxisome assembly factor 1
Length = 305
Score = 314 bits (804), Expect = 7e-84, Method: Composition-based stats.
Identities = 87/312 (27%), Positives = 150/312 (48%), Gaps = 25/312 (8%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+A+R + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MAAREESTQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + QK+ Y V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDSSPNPV----------YQPPSKNQKLLYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + + + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFRN----RHLASFGKAKQCMNFVVGLLKLGELMNFLIFLQKGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQSMREVGFEYMNRELLWHGFAEFLVFLLPLINIQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+S+ D+ C +C P +P + C+H +CYYC+++ F C +C
Sbjct: 225 IPLTSTAGSDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDMYFTCPKC 283
Query: 318 NEPVVAIQREGV 329
V ++Q
Sbjct: 284 GTEVHSVQPLKS 295
>ref|NP_058930.1| peroxin 2 [Rattus norvegicus]
dbj|BAA06307.1| peroxisome assembly factor-1 [Rattus norvegicus]
Length = 305
Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 29/314 (9%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+A+R + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MAAREESTQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ + QK+ Y V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDSSPNPV----------YQPPSKNQKLLYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLAR--RLWTLVQRIEGIYKAASFLNLLSFLYTGR 201
+GG++L R + F R LA + + + G+ K +N L FL G+
Sbjct: 111 IGGRWLEER--CYDLF------PNRHLASFGKAKQCMNFVVGLLKLGELMNFLIFLQKGK 162
Query: 202 YRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSP 261
+ L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS
Sbjct: 163 FATLTERLLGIHSVFCKPQSMREVGFEYMNRELLWHGFAEFLVFLLPLINIQKLKAKLSS 222
Query: 262 FAKDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCL 315
+ +S+ D+ C +C P +P + C+H +CYYC+++ F C
Sbjct: 223 WCIPLTSTAGSDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDMYFTCP 281
Query: 316 RCNEPVVAIQREGV 329
+C V ++Q
Sbjct: 282 KCGTEVHSVQPLKS 295
>gb|EAW87052.1| peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Homo
sapiens]
Length = 305
Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats.
Identities = 88/312 (28%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR+ + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MASRKENAKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QKIWY V +
Sbjct: 61 WVFLWRFTIYSKNATVGQSVLNIKYKNDFS----------PNLRYQPPSKNQKIWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR ++ V + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFRNHH----LASFGKVKQCVNFVIGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNICEVGFEYMNRELLWHGFAEFLIFLLPLINVQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CY+C ++ F C +C
Sbjct: 225 IPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIGCEHIFCYFCAKSSFLFDVYFTCPKC 283
Query: 318 NEPVVAIQREGV 329
V ++Q
Sbjct: 284 GTEVHSLQPLKS 295
>ref|XP_544136.2| PREDICTED: similar to Peroxisome assembly factor-1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Canis familiaris]
Length = 305
Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats.
Identities = 90/312 (28%), Positives = 148/312 (47%), Gaps = 25/312 (8%)
Query: 26 LASRRSV--IPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+ASR + R++Q DA L+ + ++ Q + F KPG+L +EPE+ A L
Sbjct: 1 MASREEKTKRTDRVLRISQLDALELNKALEQLVWAQFTQCFHGFKPGLLAHFEPEVKALL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++Y+++ L + QK+WY V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQYKNDFS----------PKLRYQPPSKNQKLWYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG +L R + FR + V + G+ K +N L FL G++
Sbjct: 111 IGGTWLEER--CYDLFRN----RHLASFGKARQCVNIMVGLLKLGGLINFLIFLQRGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L R V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIRSVFCKPQNVREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D C +C P +P + C+H +CYYC+++ F C +C
Sbjct: 225 IPLTGAPTSDNTLATSGKQCSLCGEWPTMPH-TIGCEHIFCYYCVKSSFLFDMYFTCPKC 283
Query: 318 NEPVVAIQREGV 329
V ++Q
Sbjct: 284 GTEVQSLQPLKS 295
>ref|XP_001912471.1| unnamed protein product [Podospora anserina]
sp|P51021|PEX2_PODAN Peroxisomal biogenesis factor 2 (Peroxin-2) (Peroxisomal protein
CAR1)
emb|CAA60739.1| peroxisome assembly factor [Podospora anserina]
emb|CAP59952.1| unnamed protein product [Podospora anserina]
Length = 554
Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats.
Identities = 99/360 (27%), Positives = 156/360 (43%), Gaps = 64/360 (17%)
Query: 17 RLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK------PG 70
L ++SR P RV Q DA LD E+ ++K Q+ +
Sbjct: 97 STLSLWD-TISSREGTRPAF--RVGQVDAELLDEELVELMKGQVGEAVRYYGGGGGGDNN 153
Query: 71 MLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPG 130
+ +++ E+ L +I++ +IW T G AL NL+Y D R TG
Sbjct: 154 IKHEWDAEISLALRAVIFKLTIWDHDATYGAALQNLKYTDAR----------HTGSVLVP 203
Query: 131 LTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASF 190
+ QK Y + +VGG+Y++S+ +++ + G E P +RL ++ R+ ++ AASF
Sbjct: 204 PSKWQKGLYGLMTVGGRYMWSKWENWLREQDGGYDEPSPTVQRLSSMTDRLSTLHAAASF 263
Query: 191 LNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLL 250
+ L FL GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+
Sbjct: 264 ASFLVFLLQGRYRTLLDRVLRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLV 323
Query: 251 NSSAVKNILSPFAKDKSSSTKED----------------TVTCPIC-------------- 280
+ + L+ + TC IC
Sbjct: 324 GINRWRRWLARTWRKTKKIMSTTGGEGAEEKKGEFAFLPERTCAICYQDQNQATNENELM 383
Query: 281 -------------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ 325
Q D P+ +PC YC+ C+ TR + CLRC E V +
Sbjct: 384 AAATSKTGVVGSAQTDVTNPYETIPCGCVYCFVCLATRIEREEGEGWNCLRCGELVKECK 443
>sp|Q06438|PEX2_CRIGR Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3)
emb|CAA78929.1| peroxisome assembly factor 1 [Cricetulus griseus]
dbj|BAA06308.1| peroxisome assembly factor-1 [Cricetulus griseus]
Length = 304
Score = 309 bits (791), Expect = 3e-82, Method: Composition-based stats.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 24/311 (7%)
Query: 26 LASRRSVIPV-AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLE 84
+A R + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ A L
Sbjct: 1 MAGREKTKSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKACLW 60
Query: 85 FLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASV 144
+WRF+I+ T G +++N++Y+++ + + QK+WY V ++
Sbjct: 61 LFLWRFTIYSKNATVGQSVLNIQYKNDFS----------SNSRYQPPSKNQKLWYAVCTI 110
Query: 145 GGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRN 204
GG++L R + FR ++ + + G+ K +N L FL G++
Sbjct: 111 GGRWLEER--CYDLFRN----RHLASFGKVKQCMNVMVGLLKLGELINFLIFLQKGKFAT 164
Query: 205 LIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAK 264
L E+ L V+ P R V F+YMNR+L+W+ F+E L+ LLPL+N K LS +
Sbjct: 165 LTERLLGIHSVFCKPQNIREVGFDYMNRELLWHGFAEFLIFLLPLINIQKFKAKLSSWCI 224
Query: 265 DKSS------STKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCN 318
+ + C +C P +P + C+H +CYYC+++ F C +C
Sbjct: 225 PLTGAASSDSALASSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDMYFTCPKCG 283
Query: 319 EPVVAIQREGV 329
V ++Q
Sbjct: 284 IEVHSVQPLKS 294
>ref|NP_001093818.1| peroxin 2 [Bos taurus]
gb|AAI48002.1| LOC512677 protein [Bos taurus]
Length = 305
Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 23/300 (7%)
Query: 36 AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVD 95
+ R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL +WRF+I+
Sbjct: 13 RVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSK 72
Query: 96 KPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQS 155
T G +++N++Y+++ L + QK+WY V ++GG++L R
Sbjct: 73 NATVGQSVLNIQYQNDLS----------PNLSYQPPSRNQKLWYAVCTIGGKWLEER--C 120
Query: 156 FSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLV 215
+ FR + R+ + + G+ K +N L FL G++ L E+ L V
Sbjct: 121 YDLFRNRHIAS----FRKAKQCMNLVVGLLKLGGLINFLIFLQRGKFATLTERLLGIHSV 176
Query: 216 YRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDK------SSS 269
+ P R V FEYMNR+L+W+ F+E L+ LLPL+N ++ LS + +S+
Sbjct: 177 FHKPQSVREVGFEYMNRELLWHGFAEFLIFLLPLINVQKLRAKLSSWCVPLTGAPGSNST 236
Query: 270 TKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGV 329
C +C P +P + C+H +CYYC+++ SF C +C V ++Q
Sbjct: 237 LATSGRQCSLCGEWPTMPH-TVGCEHVFCYYCVKSSFLFDMSFTCPKCGTEVHSLQPLKS 295
>sp|P55098|PEX2_MOUSE Peroxisome assembly factor 1 (PAF-1) (Peroxin-2) (Peroxisomal
membrane protein 3)
gb|AAA21742.1| peroxisome assembly factor-1
Length = 305
Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 85/310 (27%), Positives = 149/310 (48%), Gaps = 25/310 (8%)
Query: 26 LASRRSVIPV--AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
+A+R + R++Q DA L+ + ++ Q + F KPG+L ++EPE+ AFL
Sbjct: 1 MAAREESTQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
+WRF+I+ T G +++N++++++ + QK+ Y V +
Sbjct: 61 WLFLWRFTIYSKNATVGQSVLNIQHKNDSSPNPV----------YQPPSKNQKLLYAVCT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
+GG++L R + FR + + + G+ K +N L FL G++
Sbjct: 111 IGGRWLEER--CYDLFRN----RHLASFGKAKQCMNFVVGLLKLGELMNFLIFLQKGKFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS +
Sbjct: 165 TLTERLLGIHSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
+ + D+ C +C P +P + C+H +CYYC+++ F C +C
Sbjct: 225 TLCTGAAGHDSTLGSSGKECALCGEWPTMPH-TIGCEHVFCYYCVKSSFLFDIYFTCPKC 283
Query: 318 NEPVVAIQRE 327
V ++Q
Sbjct: 284 GTEVHSVQPL 293
>ref|XP_368589.1| hypothetical protein MGG_00655 [Magnaporthe grisea 70-15]
gb|EDK02709.1| hypothetical protein MGG_00655 [Magnaporthe grisea 70-15]
Length = 498
Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats.
Identities = 94/366 (25%), Positives = 152/366 (41%), Gaps = 70/366 (19%)
Query: 17 RLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGML---- 72
L + SR P RV Q DA LD E+ L+ Q+ + + G
Sbjct: 57 SALAFWDAAT-SREGTRPAF--RVGQVDAELLDEELLGQLRSQVSEGLRYLGGGGGGSRL 113
Query: 73 -FQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGL 131
+ PE+ L ++++ +IW T G AL NL+Y D R TG
Sbjct: 114 GDDWAPEILLALRAVLFKLTIWDHDATYGAALQNLKYTDARN----------TGSVPVPP 163
Query: 132 TSPQKIWYCVASVGGQYLFSRLQSFSAFRR---WGDSEQRPLARRLWTLVQRIEGIYKAA 188
+ QK Y +V G+Y++++ + + + + + RP+ +RL L + I+ A
Sbjct: 164 SRLQKALYGTVTVCGKYVWTKWEDWLIDQDNGAYDSQQARPVVQRLSRLTELASNIHAAG 223
Query: 189 SFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLP 248
+ ++ ++FL GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LP
Sbjct: 224 ALVSFMAFLINGRYRTLLDRILRMRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLP 283
Query: 249 LLNSSAVKNILSPFAKDKSSSTKED-------------------TVTCPIC--------- 280
L+ + + ++ + + TC IC
Sbjct: 284 LVGINRWRKWITRTWRRTKDAITAGTGGEGEEGGEKKGEFAFLPERTCAICYQDQNSGAN 343
Query: 281 -------------------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNE 319
Q D P+ LPC YC+ C+ TR + CLRC E
Sbjct: 344 TEEEILAAAAASSGVIGSAQTDITNPYETLPCGCIYCFVCLATRLEREEGDGWVCLRCGE 403
Query: 320 PVVAIQ 325
V +
Sbjct: 404 IVKECK 409
>ref|XP_001377812.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Monodelphis domestica]
Length = 305
Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats.
Identities = 90/299 (30%), Positives = 145/299 (48%), Gaps = 23/299 (7%)
Query: 37 ISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDK 96
+ R++Q DA L+ + ++ Q F KPG+L + EPE+ AFL +WRF+I+
Sbjct: 14 VLRISQLDALELNKALEQLVWSQFTHCFHGFKPGLLARLEPEVKAFLWLFLWRFTIYSKN 73
Query: 97 PTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSF 156
T G ++MN++Y++ + L+ QK+WY + +VGG++L R +
Sbjct: 74 ATVGQSIMNIQYKNNYS----------QTQKYQPLSKNQKLWYAICTVGGRWLEER--CY 121
Query: 157 SAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVY 216
FR ++ I G+ K +S +N L FL G++ L E+ L R V+
Sbjct: 122 DLFRNHH----LASFYKIKQCTNLIVGLLKLSSLVNFLIFLQKGKFATLTERLLGIRSVF 177
Query: 217 RSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTV- 275
P R V FEYMNR+L+W+ F+E L+ LLPL+N +K LS + + D
Sbjct: 178 CKPQNIREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCIPFTGVPNSDVTL 237
Query: 276 -----TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGV 329
C +C P +P + C H +CYYC+++ F C +C V+ +Q
Sbjct: 238 ATHGKECSLCGEWPTMPH-TIGCVHVFCYYCVKSSYLFDMYFTCPKCGTEVLNLQPLKS 295
>ref|XP_645304.1| RING Zn finger-containing protein [Dictyostelium discoideum AX4]
gb|AAS45382.1| similar to Rattus norvegicus (Rat). Peroxisome assembly factor-1
(PAF-1) (Peroxin-2) (Peroxisomal membrane protein 3)
[Dictyostelium discoideum]
gb|EAL71269.1| RING Zn finger-containing protein [Dictyostelium discoideum AX4]
Length = 423
Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats.
Identities = 105/326 (32%), Positives = 165/326 (50%), Gaps = 32/326 (9%)
Query: 33 IPV-AISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFS 91
P +I RV+Q D+ARLD E+ +L+ Q +K+FT KP + ++PE++ L+ +I++ S
Sbjct: 103 RPSTSIVRVSQLDSARLDEEILDLLRSQFMKIFTFFKPNFIHNFQPEINLVLKSVIYKLS 162
Query: 92 IWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFS 151
I+ T GN L NL YR+E+ R + LT QK + ++GG++L++
Sbjct: 163 IFNLGTTYGNQLQNLTYRNEKAFDPI-----RGSDQLNKLTMRQKWLSGLINIGGEWLWT 217
Query: 152 RLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALK 211
R+ + W + + ++ W + E YKA + LN L+FL+ G+Y L+ + L
Sbjct: 218 RINRYLINNNWSEHPPNDIRKKFWNFLNFAESAYKALALLNFLTFLFNGKYVTLVNRILH 277
Query: 212 ARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSSTK 271
RLVY P ++R++SFEYMNR LVW+ F+E +L ++PL+N +K+ L S
Sbjct: 278 MRLVYAHPTLSRNISFEYMNRLLVWHGFTEFILFIMPLINIDRIKSFLYRLLVKTSFGNS 337
Query: 272 EDTV--------------------------TCPICQVDPAIPFIALPCQHRYCYYCIRTR 305
CPIC DP + C H +CYYCI+T
Sbjct: 338 SGNNNNTASNPLQQLQKQQLLIQQQQMALAKCPICMNDPISMPYSADCGHLFCYYCIKTS 397
Query: 306 CASAASFRCLRCNEPVVAIQREGVSS 331
C +SF C RCN + I+R +
Sbjct: 398 CMIDSSFTCPRCNSLISNIKRFSIQD 423
>ref|XP_001559557.1| hypothetical protein BC1G_01713 [Botryotinia fuckeliana B05.10]
gb|EDN28594.1| hypothetical protein BC1G_01713 [Botryotinia fuckeliana B05.10]
Length = 474
Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats.
Identities = 93/356 (26%), Positives = 144/356 (40%), Gaps = 60/356 (16%)
Query: 17 RLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYE 76
L ++ R P RV Q DA LD EM + Q+ + + +
Sbjct: 53 AGLTTWD-TISGREGTRPAF--RVGQVDAELLDEEMLDYDEGQVGEGLKYSGTHIQDDWS 109
Query: 77 PELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQK 136
E+ L ++ SIW T G L NL++ D R +G + QK
Sbjct: 110 AEIMLALRAILSNLSIWDHDATYGATLQNLKFTDAR----------HSGPVLVSPSKWQK 159
Query: 137 IWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSF 196
Y + +VGG+Y ++R +++ G + PL RL + + ++ A+F + L F
Sbjct: 160 SLYGLFTVGGKYAWTRWENYLVDSDNGYNTPSPLMSRLSRITDLLTNVHSTAAFASFLVF 219
Query: 197 LYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVK 256
L GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+ S +
Sbjct: 220 LVNGRYRTLLDRILRLRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLVGISRWR 279
Query: 257 NILSPFAKDKSSSTKED------------------TVTCPIC------------------ 280
+LS + S TC IC
Sbjct: 280 RLLSRVWRRAKSVFNTSSPDELSINEKKGELSFLPERTCAICYHDQNALQATEEGVMAAA 339
Query: 281 ---------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ 325
Q D P+ + C YC+ CI ++ + CLRC E V +
Sbjct: 340 ASTGVIGSAQTDITNPYETVECGCIYCFVCIASKLEAEEGEGWTCLRCGEDVKGCR 395
>ref|NP_001008454.1| peroxin 2 [Gallus gallus]
emb|CAG31179.1| hypothetical protein [Gallus gallus]
Length = 304
Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats.
Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 25/310 (8%)
Query: 24 SLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFL 83
S + + +SV P + R++Q DA L+ + ++ Q F KPG+L EPE+ AFL
Sbjct: 3 SSIGNEKSVNP--VLRISQLDALELNKALEQLVWSQFTSCFHGFKPGVLAHIEPEVKAFL 60
Query: 84 EFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVAS 143
L+WRF+I+ T G A++N++Y++ + L+ QK+WY + +
Sbjct: 61 WLLLWRFTIYSKNATVGQAILNIQYKNNLSQTE----------KYQPLSKHQKLWYLIFT 110
Query: 144 VGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYR 203
VGG++L R + F Q ++ + G+ K +N L FL G +
Sbjct: 111 VGGRWLEER--CYDLFSN----RQLQSVSKIKHYINFGAGLLKLCGLVNFLIFLQKGTFA 164
Query: 204 NLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFA 263
L E+ L R V+ P R V FEYMNR+L+W+ F+E L+ LLPL+N +K + +
Sbjct: 165 TLTERILGIRSVFCKPQSVRQVGFEYMNRELLWHGFAEFLIYLLPLINVQKLKLKICSWC 224
Query: 264 KDKSSSTKEDTV------TCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRC 317
++ D C +C P +P + C H +CYYCI++ F C +C
Sbjct: 225 FPIANLPNSDKTLATHYKVCSLCGEWPTMPH-TIGCSHVFCYYCIKSNYLFDMYFTCPKC 283
Query: 318 NEPVVAIQRE 327
V ++Q
Sbjct: 284 GSEVHSLQPL 293
>ref|XP_001593335.1| hypothetical protein SS1G_06257 [Sclerotinia sclerotiorum 1980]
gb|EDO03776.1| hypothetical protein SS1G_06257 [Sclerotinia sclerotiorum 1980]
Length = 484
Score = 297 bits (760), Expect = 9e-79, Method: Composition-based stats.
Identities = 95/356 (26%), Positives = 149/356 (41%), Gaps = 60/356 (16%)
Query: 17 RLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYE 76
L +++ R P RV Q DA LD E+ +LK Q+ + + +
Sbjct: 53 AGLTTWD-MISGREGTRPSF--RVGQVDAELLDEELLDLLKGQVGEGLKYFGTHIQDDWS 109
Query: 77 PELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQK 136
E+ L ++++ SIW T G L NL++ D R +G + QK
Sbjct: 110 AEIMLALRAILFKLSIWDHDATYGATLQNLKFTDAR----------HSGSVLVSPSKWQK 159
Query: 137 IWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSF 196
Y + +VGG+Y ++R +++ G + PL RL + + ++ A+F + L F
Sbjct: 160 GLYGLFTVGGKYAWTRWENYLVDSDNGYNTPSPLISRLSRITDLLTNVHSTAAFASFLVF 219
Query: 197 LYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVK 256
L GRYR L+++ L+ RL + ++R VSFEY+NRQLVW+ F+E LL +LPL+ S +
Sbjct: 220 LVNGRYRTLLDRVLRLRLAPPTSQVSREVSFEYLNRQLVWHAFTEFLLFVLPLVGISRWR 279
Query: 257 NILSPFAKDKSSSTKED------------------TVTCPIC------------------ 280
LS F + S TC IC
Sbjct: 280 RFLSRFWRRTKSLFNTSSTDELSSSTKKGELAFLPERTCAICYHDQNALQATEEGVMAAA 339
Query: 281 ---------QVDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ 325
Q D P+ + C YC+ CI ++ + CLRC E V +
Sbjct: 340 ASTGVIGSAQTDITNPYETVECGCIYCFVCIASKLEAEEGEGWTCLRCGEEVKRCR 395
>ref|NP_001016841.1| peroxin 2 [Xenopus tropicalis]
emb|CAJ82611.1| peroxisomal membrane protein 3, 35kDa (Zellweger syndrome) [Xenopus
tropicalis]
gb|AAI21554.1| Peroxisomal membrane protein 3 [Xenopus tropicalis]
Length = 306
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 92/304 (30%), Positives = 151/304 (49%), Gaps = 24/304 (7%)
Query: 30 RSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWR 89
+ P + R++Q DA L+ + ++ Q F KPG+L ++EPE+ AFL +WR
Sbjct: 9 EEINP--VLRISQLDAIELNKALEQLIWSQFNSCFQGFKPGLLTRFEPEIKAFLCLFLWR 66
Query: 90 FSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYL 149
++I+ T G A++N++Y+++ + L QK+W+ + VGG++L
Sbjct: 67 YTIYTKNATVGQAILNMQYKNDLEATKNYR----------PLNKQQKVWFALFMVGGKWL 116
Query: 150 FSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKA 209
R SF F +R + I G+ K + LN L FL G++ L E+
Sbjct: 117 EER--SFDLFSNHPF---GASFQRTKYFLNAISGLLKFGALLNFLIFLQQGKFATLTERL 171
Query: 210 LKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKDKSSS 269
L R V+ P R V FEYMNR+++W+ F+E L+ LLPL+N+ +K+ L + K
Sbjct: 172 LGIRSVFSRPQDVRQVGFEYMNREILWHGFAEFLIFLLPLINTQKLKSKLFSWCKPAKGH 231
Query: 270 TKED------TVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVA 323
+ D C +C PA+P + C H +CYYCI++ + F C +C+ V
Sbjct: 232 SLSDPSLAVICKECCLCGEWPAMPH-TIGCSHVFCYYCIKSNYMADMYFTCPKCSSQVHN 290
Query: 324 IQRE 327
+Q
Sbjct: 291 LQPL 294
>gb|EDU43666.1| peroxisomal biogenesis factor 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 535
Score = 287 bits (736), Expect = 6e-76, Method: Composition-based stats.
Identities = 97/359 (27%), Positives = 139/359 (38%), Gaps = 68/359 (18%)
Query: 22 SQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDA 81
++ R P RV Q DA LD E+ ++LK Q+ + + Y E+
Sbjct: 56 WDAI-KGRTGTRPEF--RVGQVDAELLDEELLSLLKGQVGEGLKYFGSHITDNYSAEILL 112
Query: 82 FLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCV 141
L ++W+ SIW + G L LRY D R P QK+ Y
Sbjct: 113 VLRAILWKLSIWDQNASYGAHLQGLRYTDARSNAPN----------RPPPKPWQKVAYGA 162
Query: 142 ASVGGQYLFSRLQSFSAFRRWGD-SEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTG 200
+VGG+Y +++ + + + + L L + + + L FL G
Sbjct: 163 ITVGGRYAWTKWEDYLLSASEDYTRPESTKLKMLGRLSELAGSAHDMFGLASFLVFLVDG 222
Query: 201 RYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILS 260
RYR + ++ L+ RL S +R VSFEY+NRQLVW+ F+E LL LLPL+ S + ILS
Sbjct: 223 RYRTITDRLLRLRLTPTSHATSREVSFEYLNRQLVWHAFTEFLLFLLPLVGISRWRRILS 282
Query: 261 PF--------------AKDKSSSTKED----------TVTCPICQ--------------- 281
+K SS E+ TC IC
Sbjct: 283 RTFRKFQSTILSLLGRSKSTSSDNDEEKASGELGFLPERTCAICYRDQNPTTASEADILA 342
Query: 282 -------------VDPAIPFIALPCQHRYCYYCIRTRC--ASAASFRCLRCNEPVVAIQ 325
D P+ A+PC YC+ CI R + CLRC E V Q
Sbjct: 343 SSAGGGGVVGSAATDITNPYEAMPCGCIYCFACIAQRIANEEGEGWTCLRCGETVKECQ 401
>gb|ACO64229.1| predicted protein [Micromonas sp. RCC299]
Length = 357
Score = 284 bits (726), Expect = 9e-75, Method: Composition-based stats.
Identities = 118/348 (33%), Positives = 175/348 (50%), Gaps = 33/348 (9%)
Query: 18 LLPESQSLLASRRS--------VIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKP 69
P S + + + V + RV Q DA RLD E+ ++L+EQ +VF ++ P
Sbjct: 8 AGPSSPATMGTPPPSSSPSSKPAPDVRVLRVAQVDAGRLDDELVSLLREQFNRVFAMVFP 67
Query: 70 GMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDER-------GVVAQHLGKV 122
G + + + EL L+ L++ F++W +PTPG LMNLRYRDER +
Sbjct: 68 GAVTRRQSELTLLLDALVFYFTVWSHRPTPGMELMNLRYRDERPSSSSSGSSSSSQRSTG 127
Query: 123 RTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIE 182
RTG+EG L+ Q++ Y A VGG++ +S+L+ RW D + R + V +E
Sbjct: 128 RTGMEGAKLSVSQRLLYGTAFVGGRFAWSKLRRAIGAGRWADEPEGSWRRVASSAVSALE 187
Query: 183 GIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEM 242
Y A + +NLL+FL GRYR L E+AL+ RLVY PH R VS+EY+NRQLVW E SE+
Sbjct: 188 ATYSALALVNLLAFLNRGRYRTLTERALRTRLVYGEPHARRMVSYEYLNRQLVWREVSEL 247
Query: 243 LLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTVT---------------CPICQVDPA-I 286
L +LP++++ ++ S C C +PA
Sbjct: 248 ALFVLPMVSAPGLRRAASRAFGVGPGGDGPGGGRLGGAEGGAEGCRGGPCVECGGEPAGA 307
Query: 287 PFIALPCQHRYCYYCIRTRCAS--AASFRCLRCNEPVVAIQREGVSSG 332
+ + PC H +CYYC +R + + C RC EPV I++ G
Sbjct: 308 RYASTPCGHAFCYYCAASRAGTRGDRGYTCPRCREPVRGIRQVRAEGG 355
>gb|EAZ33629.1| hypothetical protein OsJ_017112 [Oryza sativa (japonica
cultivar-group)]
Length = 252
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 174/232 (75%), Positives = 201/232 (86%), Gaps = 1/232 (0%)
Query: 9 DAWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK 68
DAW Y+RLLP+ +S+ S + IP++ISRVNQFDAARLDVEMSAMLKEQLVKVF+L+K
Sbjct: 22 DAWAAEYRRLLPQWESMRDSSKIAIPISISRVNQFDAARLDVEMSAMLKEQLVKVFSLVK 81
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEG 128
PG+LFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDER +VRTGLEG
Sbjct: 82 PGLLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERAA-PITGKEVRTGLEG 140
Query: 129 PGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAA 188
PGL+ QK+ YC+++VGGQY++SRLQSFSAFRRWGDSEQRPLARR W LVQ EG+Y+A+
Sbjct: 141 PGLSVSQKVLYCISTVGGQYIWSRLQSFSAFRRWGDSEQRPLARRAWGLVQHAEGLYRAS 200
Query: 189 SFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFS 240
SF NLL FLY RY+ ++E+ LKARLVY SP+MNR+VSFEYMNRQLVWNEFS
Sbjct: 201 SFFNLLLFLYGARYKTIVERILKARLVYESPNMNRAVSFEYMNRQLVWNEFS 252
>ref|XP_519817.2| PREDICTED: peroxisomal membrane protein 3 [Pan troglodytes]
Length = 326
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 81/276 (29%), Positives = 133/276 (48%), Gaps = 23/276 (8%)
Query: 60 LVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHL 119
+ F KPG+L ++EPE+ A L +WRF+I+ T G +++N++Y+++
Sbjct: 58 FTQCFHGFKPGLLARFEPEVKACLWVFLWRFTIYSKNATVGQSVLNIKYKNDFS------ 111
Query: 120 GKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQ 179
L + QKIWY V ++GG++L R + FR Q ++ V
Sbjct: 112 ----PNLRYQPPSKNQKIWYAVCTIGGRWLEER--CYDLFRNH----QLASFGKVKQCVN 161
Query: 180 RIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEF 239
+ G+ K +N L FL G++ L E+ L V+ P R V FEYMNR+L+W+ F
Sbjct: 162 FVIGLLKLGGLINFLIFLQRGKFATLTERLLGIHSVFCKPQNIREVGFEYMNRELLWHGF 221
Query: 240 SEMLLLLLPLLNSSAVKNILSPFAKDKSSSTKEDTV------TCPICQVDPAIPFIALPC 293
+E L+ LLPL+N +K LS + + + D C +C P +P + C
Sbjct: 222 AEFLIFLLPLINVQKLKAKLSSWCIPLTGAPNSDNTLATSGKECALCGEWPTMPH-TIGC 280
Query: 294 QHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGV 329
+H +CY+C ++ F C +C V ++Q
Sbjct: 281 EHIFCYFCAKSSFLFDMYFTCPKCGTEVHSLQPLKS 316
>ref|XP_684073.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Danio rerio]
ref|XP_001343742.1| PREDICTED: similar to Peroxisome assembly factor 1 (PAF-1)
(Peroxin-2) (Peroxisomal membrane protein 3) (35 kDa
peroxisomal membrane protein) (RING finger protein 72)
[Danio rerio]
Length = 321
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 90/304 (29%), Positives = 152/304 (50%), Gaps = 22/304 (7%)
Query: 35 VAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMKPGMLFQYEPELDAFLEFLIWRFSIWV 94
+ R++Q DA LD + ++ Q + F KPG+L EPEL A L+ L+WRF+I+
Sbjct: 28 SRVLRISQLDAFELDGALEQLVWSQFTQCFQHFKPGILTPVEPELKALLQLLLWRFTIYS 87
Query: 95 DKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEGPGLTSPQKIWYCVASVGGQYLFSRLQ 154
+ T G +L+N+RY++ + G + ++ PQK W+ + +VG ++ R
Sbjct: 88 NSATVGQSLLNIRYKNA----------LIPGQKYRPMSRPQKFWFALLTVGEKWFRERSH 137
Query: 155 SFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAASFLNLLSFLYTGRYRNLIEKALKARL 214
S AR+ ++ + G+ KAAS +N L FL G + L E+ L +
Sbjct: 138 SLFLNH-----PAESNARKARKVLSILLGLTKAASLVNFLLFLQRGTFPTLTERLLGVQP 192
Query: 215 VYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLPLLNSSAVKNILSPFAKD------KSS 268
V+ P R ++F+Y+NR+L+W+ F+E L+ LLPL+N +K +S S
Sbjct: 193 VFSRPQGPRDINFQYLNRELLWHGFAEFLIFLLPLINVWKLKAGVSALFSPLSDLTGTQS 252
Query: 269 STKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREG 328
S + C IC P +P ++ C+H +CYYC+++ + F C +C I+
Sbjct: 253 SEETHLTECAICGEWPTMPH-SIGCKHVFCYYCVKSNVIADIYFTCPKCGAETGQIEPVR 311
Query: 329 VSSG 332
+ G
Sbjct: 312 LQVG 315
>ref|XP_820860.1| peroxin-2, putative [Trypanosoma cruzi strain CL Brener]
gb|EAN99009.1| peroxin-2, putative [Trypanosoma cruzi]
Length = 331
Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 137/317 (43%), Gaps = 10/317 (3%)
Query: 10 AWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTL-MK 68
A + Q LP SQ+ A + + RV Q A + E+ +L+ L +F L
Sbjct: 15 AMVMKQQGALPTSQTFTALPEN----HVLRVFQLGALQTQAELVDILRSSLFDIFDLDAL 70
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEG 128
+ Y+ EL FL+ +++ S W + G+ L N+ RDE + V +
Sbjct: 71 QSYRYAYQDELVFFLDVILYWGSTWRRSQSIGDRLGNIVMRDETKALENGQSSVVRLVPS 130
Query: 129 PGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAA 188
T + + + + ++ YL +LQ S W L R+ ++ + A
Sbjct: 131 LAPTRGRLLVHAILTILVPYLVRKLQRKSMEEDWEGESPGSLRARVAKTIRLASTAWAAF 190
Query: 189 SFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLP 248
S L+ L FL T +YR L+E+ L RLVY S R + Y+N+ ++W +S L +L
Sbjct: 191 SLLHTLHFLATAQYRTLVERLLSLRLVYGSQSTQRVTNLMYLNQHVMWQTWSSFLAVLNI 250
Query: 249 LLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCAS 308
S + L F S T D V C C P I + C H YCYYCI++R
Sbjct: 251 GRYLSRLTRSLQAFTSPSGSLTLGDNVCCA-CHSHPTIGQRS-NCGHLYCYYCIKSRLLD 308
Query: 309 AA---SFRCLRCNEPVV 322
SFRCLRC V
Sbjct: 309 PRLAGSFRCLRCGTTVH 325
>emb|CAC59701.1| peroxin-2 [Trypanosoma brucei]
Length = 332
Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats.
Identities = 84/316 (26%), Positives = 138/316 (43%), Gaps = 10/316 (3%)
Query: 10 AWIRSYQRLLPESQSLLASRRSVIPVAISRVNQFDAARLDVEMSAMLKEQLVKVFTLMK- 68
A + Q LP S A + + R+ Q +A E+ +L+ L+ +F +
Sbjct: 15 ATVLKQQGALPTSNMFTALPEN----RVLRIFQLNALTTQEEVVEILRGYLLDIFNIGAL 70
Query: 69 PGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMNLRYRDERGVVAQHLGKVRTGLEG 128
+ Y+ E L+ +++ S W + G+ + NL R+E + +
Sbjct: 71 QSYRYVYQDEFSFLLDVILFFGSTWRCGQSVGDRMQNLVLRNEIKALESGQSDAVQLVHS 130
Query: 129 PGLTSPQKIWYCVASVGGQYLFSRLQSFSAFRRWGDSEQRPLARRLWTLVQRIEGIYKAA 188
+ + + Y V ++ YLF +LQ + W D + R+L L++ + +
Sbjct: 131 LVPSRARLLLYGVLNLFVPYLFRKLQRRALEEGWEDGGAGVVKRKLAKLLKAVSVSWMII 190
Query: 189 SFLNLLSFLYTGRYRNLIEKALKARLVYRSPHMNRSVSFEYMNRQLVWNEFSEMLLLLLP 248
S L+ L FL T +YR +E+ L RLVY S R + Y+N+ + W +S + +L
Sbjct: 191 SLLHTLHFLATAQYRTPVERMLSLRLVYGSQDTRRFTNLIYLNQHIFWQIWSSFISVLNI 250
Query: 249 LLNSSAVKNILSPFAKDKSSSTKEDTVTCPICQVDPAIPFIALPCQHRYCYYCIRTRCA- 307
+S V L F + + D C C P +P + C H YCYYCI++R
Sbjct: 251 GRYTSRVTRFLQAFTAKPGNPSLTDN-ACSACHNKPTLPQRS-NCGHLYCYYCIKSRLLG 308
Query: 308 --SAASFRCLRCNEPV 321
SA SFRCLRC V
Sbjct: 309 PGSAKSFRCLRCGTVV 324
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 23, 2008 5:56 PM
Number of letters in database: 883,778,997
Number of sequences in database: 2,617,685
Database: /host/Blast/data/nr_perl/nr.01
Posted date: May 23, 2008 5:54 PM
Number of letters in database: 976,759,346
Number of sequences in database: 2,761,413
Database: /host/Blast/data/nr_perl/nr.02
Posted date: May 23, 2008 5:48 PM
Number of letters in database: 374,670,760
Number of sequences in database: 1,165,270
Database: /host/Blast/data/nr_perl/nr.03
Posted date: Apr 28, 2009 5:40 PM
Number of letters in database: 114,943,120
Number of sequences in database: 354,819
Lambda K H
0.314 0.151 0.424
Lambda K H
0.267 0.0464 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,808,479,291
Number of Sequences: 6899187
Number of extensions: 206392227
Number of successful extensions: 869366
Number of sequences better than 10.0: 300
Number of HSP's better than 10.0 without gapping: 4409
Number of HSP's successfully gapped in prelim test: 18677
Number of HSP's that attempted gapping in prelim test: 839407
Number of HSP's gapped (non-prelim): 30348
length of query: 333
length of database: 2,350,152,223
effective HSP length: 134
effective length of query: 199
effective length of database: 1,425,661,165
effective search space: 283706571835
effective search space used: 283706571835
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.8 bits)
S2: 79 (34.9 bits)