BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= AT5G25760__[Arabidopsis_thaliana]
(157 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,899,187 sequences; 2,350,152,223 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568476.1| PEX4 (PEROXIN4); ubiquitin-protein ligase ... 325 6e-88
emb|CAO44055.1| unnamed protein product [Vitis vinifera] 311 9e-84
ref|NP_001047515.1| Os02g0634800 [Oryza sativa (japonica cu... 310 3e-83
gb|ABK94752.1| unknown [Populus trichocarpa] 309 3e-83
gb|ACA24139.1| ubiquitin-conjugating enzyme [Lolium temulen... 303 2e-81
gb|ABK23891.1| unknown [Picea sitchensis] 283 4e-75
gb|ABR26629.1| ubiquitin conjugating enzyme [Lolium perenne] 273 2e-72
ref|XP_001773168.1| predicted protein [Physcomitrella paten... 270 2e-71
ref|XP_001697709.1| hypothetical protein CHLREDRAFT_131472 ... 228 1e-58
gb|ABY75232.1| uqibuitin-protein ligase-like protein [Salvi... 207 1e-52
gb|AAN16047.1| ubiquitin-conjugating enzyme E2 [Pavlova lut... 201 1e-50
ref|XP_643940.1| putative ubiquitin-conjugating enzyme E2 [... 200 3e-50
ref|XP_952557.1| ubiquitin-conjugating enzyme e2, putative ... 192 5e-48
ref|XP_764725.1| ubiquitin-protein ligase [Theileria parva ... 189 4e-47
ref|XP_675637.1| ubiquitin-conjugating enzyme E2 [Plasmodiu... 182 6e-45
ref|XP_966052.1| ubiquitin-conjugating enzyme E2, putative ... 181 1e-44
ref|XP_001022900.1| Ubiquitin-conjugating enzyme family pro... 176 4e-43
ref|XP_846929.1| ubiquitin-conjugating enzyme E2, putative ... 175 8e-43
ref|XP_731132.1| ubiquitin-conjugating enzyme E2 [Plasmodiu... 175 9e-43
ref|XP_813834.1| ubiquitin-conjugating enzyme E2, putative ... 174 2e-42
ref|XP_001612120.1| ubiquitin-conjugating enzyme E2, putati... 173 3e-42
ref|XP_812539.1| ubiquitin-conjugating enzyme E2, putative ... 172 6e-42
ref|XP_746022.1| ubiquitin-conjugating enzyme E2 [Plasmodiu... 169 6e-41
ref|XP_001713233.1| ubiquitin-conjugating enzyme E2-21 KD [... 160 2e-38
ref|XP_001562585.1| ubiquitin carrier protein, putative [Le... 160 3e-38
ref|XP_001388390.1| ubiquitin-conjugating enzyme E2, putati... 160 3e-38
ref|XP_001712272.1| uceE2 [Hemiselmis andersenii] >gi|15976... 159 4e-38
ref|XP_001429388.1| hypothetical protein GSPATT00032222001 ... 159 6e-38
ref|XP_001732550.1| hypothetical protein MGL_0325 [Malassez... 157 2e-37
ref|XP_001680996.1| ubiquitin carrier protein, putative; ub... 157 3e-37
ref|XP_001463302.1| ubiquitin carrier protein, putative [Le... 156 4e-37
ref|NP_595078.1| ubiquitin conjugating enzyme Ubc16 [Schizo... 153 4e-36
ref|XP_503549.1| hypothetical protein [Yarrowia lipolytica]... 151 1e-35
ref|XP_001432721.1| hypothetical protein GSPATT00034803001 ... 150 2e-35
ref|XP_001310926.1| Ubiquitin-conjugating enzyme family pro... 150 4e-35
ref|XP_001616087.1| ubiquitin-conjugating enzyme E2 I, puta... 150 4e-35
pdb|2PWQ|A Chain A, Crystal Structure Of A Putative Ubiquit... 134 1e-30
sp|O60015|UBCX_PICAN Ubiquitin-conjugating enzyme E2-21 kDa... 134 2e-30
ref|XP_674871.1| ubiquitin-conjugating enzyme [Plasmodium b... 134 2e-30
ref|XP_001610991.1| ubiquitin-conjugating enzyme, putative ... 134 2e-30
ref|XP_729393.1| ubiquitin conjugating enzyme [Plasmodium y... 134 3e-30
ref|XP_001350274.1| ubiquitin-conjugating enzyme [Plasmodiu... 133 3e-30
ref|XP_954044.1| ubiquitin conjugating enzyme, putative [Th... 130 3e-29
ref|XP_766253.1| ubiquitin conjugating enzyme [Theileria pa... 129 4e-29
ref|XP_001382750.2| hypothetical protein PICST_40340 [Pichi... 126 6e-28
gb|EDU48836.1| ubiquitin-conjugating enzyme E2 4 [Pyrenopho... 125 6e-28
ref|XP_001537771.1| conserved hypothetical protein [Ajellom... 125 9e-28
ref|XP_001616347.1| Ubiquitin-conjugating enzyme family pro... 125 1e-27
ref|XP_001800618.1| hypothetical protein SNOG_10342 [Phaeos... 125 1e-27
ref|XP_001265674.1| ubiquitin conjugating enzyme (UbcJ), pu... 124 2e-27
ref|XP_001246438.1| ubiquitin-conjugating enzyme [Coccidioi... 123 4e-27
ref|XP_001823233.1| hypothetical protein [Aspergillus oryza... 123 4e-27
gb|EEH41838.1| ubiquitin-conjugating enzyme [Paracoccidioid... 123 5e-27
ref|XP_625630.1| Ubc1p like ubiquitin-conjugating enzyme E2... 122 6e-27
ref|XP_459094.1| hypothetical protein DEHA0D15444g [Debaryo... 121 1e-26
ref|XP_749249.1| ubiquitin conjugating enzyme (UbcJ) [Asper... 121 1e-26
ref|XP_721949.1| ubiquitin-conjugating enzyme Pex4 [Candida... 120 4e-26
ref|XP_722110.1| ubiquitin-conjugating enzyme Pex4 [Candida... 120 4e-26
ref|XP_652691.1| ubiquitin-conjugating enzyme family protei... 119 6e-26
ref|XP_001483289.1| hypothetical protein PGUG_04018 [Pichia... 119 7e-26
gb|ABH11415.1| peroxin 4 [Penicillium chrysogenum] 119 9e-26
pdb|2OXQ|A Chain A, Structure Of The Ubch5 :chip U-Box Comp... 118 1e-25
ref|XP_001606785.1| PREDICTED: similar to ubiquitin conjuga... 118 1e-25
ref|XP_392901.2| PREDICTED: similar to bendless CG18319-PA ... 118 1e-25
ref|XP_001736851.1| ubiquitin-conjugating enzyme E2 D4, put... 117 2e-25
ref|XP_001525049.1| conserved hypothetical protein [Loddero... 117 2e-25
ref|XP_001475660.1| PREDICTED: similar to ubiquitin-conjuga... 117 2e-25
ref|NP_955958.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5... 117 2e-25
ref|XP_635643.1| hypothetical protein DDBDRAFT_0188947 [Dic... 117 3e-25
ref|XP_969360.1| PREDICTED: similar to CG18319-PA [Triboliu... 117 3e-25
ref|XP_001458160.1| hypothetical protein GSPATT00003626001 ... 116 4e-25
gb|EDK98464.1| mCG1038069 [Mus musculus] 116 4e-25
ref|XP_001623427.1| predicted protein [Nematostella vectens... 116 4e-25
ref|XP_001907470.1| unnamed protein product [Podospora anse... 116 6e-25
ref|XP_453031.1| unnamed protein product [Kluyveromyces lac... 115 7e-25
ref|NP_001072891.1| ubiquitin-conjugating enzyme E2D 1 (UBC... 115 7e-25
gb|AAG40371.1|AF325019_1 AT4g27960 [Arabidopsis thaliana] 115 7e-25
ref|NP_567791.1| UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubi... 115 7e-25
ref|NP_989375.1| ubiquitin-conjugating enzyme E2N (UBC13 ho... 115 9e-25
ref|XP_001635732.1| predicted protein [Nematostella vectens... 115 9e-25
ref|NP_446380.1| ubiquitin-conjugating enzyme E2N [Rattus n... 115 9e-25
ref|XP_001105664.1| PREDICTED: similar to ubiquitin-conjuga... 115 9e-25
sp|Q4R4I1|UBE2N_MACFA Ubiquitin-conjugating enzyme E2 N (Ub... 115 1e-24
ref|XP_001273170.1| ubiquitin conjugating enzyme (UbcJ), pu... 115 1e-24
ref|XP_636583.1| hypothetical protein DDBDRAFT_0188059 [Dic... 115 1e-24
emb|CAH58635.1| Ubiquitin-conjugating enzyme [Plantago major] 115 1e-24
ref|XP_001708758.1| Ubiquitin-conjugating enzyme E2-17 kDa ... 115 1e-24
ref|NP_010462.1| Ubiquitin-conjugating enzyme that mediates... 115 1e-24
dbj|BAB24239.1| unnamed protein product [Mus musculus] 115 1e-24
pdb|2C2V|B Chain B, Crystal Structure Of The Chip-Ubc13-Uev... 115 1e-24
gb|AAP36228.1| Homo sapiens ubiquitin-conjugating enzyme E2... 115 1e-24
ref|XP_001644260.1| hypothetical protein Kpol_1030p10 [Vand... 115 1e-24
gb|ABQ12946.1| ubiquitin-conjugating enzyme E2N-like [Bos t... 115 1e-24
gb|ACO15432.1| Ubiquitin-conjugating enzyme E2 N [Caligus c... 114 1e-24
ref|NP_001012828.1| ubiquitin-conjugating enzyme E2N [Gallu... 114 2e-24
pdb|1TTE|A Chain A, The Structure Of A Class Ii Ubiquitin-C... 114 2e-24
gb|EAZ12964.1| hypothetical protein OsJ_002789 [Oryza sativ... 114 2e-24
ref|NP_003339.1| ubiquitin-conjugating enzyme E2N [Homo sap... 114 2e-24
ref|XP_387033.1| hypothetical protein FG06857.1 [Gibberella... 114 2e-24
ref|XP_534272.1| PREDICTED: similar to ubiquitin-conjugatin... 114 2e-24
ref|NP_001045711.1| Os02g0120600 [Oryza sativa (japonica cu... 114 2e-24
ref|XP_509265.2| PREDICTED: similar to ubiquitin-conjugatin... 114 2e-24
ref|NP_011649.1| Peroxisomal ubiquitin conjugating enzyme r... 114 2e-24
dbj|BAD08135.1| ubiquitin-conjugating enzyme [Oryza sativa ... 114 2e-24
ref|XP_001457111.1| hypothetical protein GSPATT00022887001 ... 114 2e-24
ref|XP_001220857.1| hypothetical protein CHGG_01636 [Chaeto... 114 2e-24
gb|AAD42941.1|AF091621_1 ubiquitin-conjugating enzyme E2 [C... 114 3e-24
ref|NP_001040393.1| ubiquitin conjugating enzyme E2 [Bombyx... 114 3e-24
gb|ABK92892.1| unknown [Populus trichocarpa] 114 3e-24
ref|XP_001007905.2| Ubiquitin-conjugating enzyme family pro... 114 3e-24
ref|NP_565391.1| UBC29 (UBIQUITIN-CONJUGATING ENZYME 29); u... 114 3e-24
gb|AAI55783.1| Unknown (protein for MGC:174834) [Danio rerio] 113 4e-24
ref|XP_001257428.1| ubiquitin conjugating enzyme (UbcM), pu... 113 4e-24
ref|XP_001631613.1| predicted protein [Nematostella vectens... 113 4e-24
ref|NP_956636.1| ubiquitin-conjugating enzyme E2N-like [Dan... 113 4e-24
gb|ABK22122.1| unknown [Picea sitchensis] 113 4e-24
ref|XP_001383781.2| hypothetical protein PICST_71285 [Pichi... 113 4e-24
ref|XP_747835.1| ubiquitin conjugating enzyme (UbcM) [Asper... 113 5e-24
ref|XP_001643784.1| hypothetical protein Kpol_480p13 [Vande... 113 5e-24
ref|XP_001897800.1| Ubiquitin conjugating enzyme protein 13... 113 5e-24
ref|XP_388734.1| hypothetical protein FG08558.1 [Gibberella... 113 5e-24
ref|XP_314098.2| AGAP005197-PA [Anopheles gambiae str. PEST... 113 5e-24
ref|XP_666164.1| ubiquitin-conjugating enzyme [Cryptosporid... 113 5e-24
sp|O74201|UBC2_CANAL Ubiquitin-conjugating enzyme E2 2 (Ubi... 112 6e-24
ref|XP_757129.1| ubiquitin-conjugating enzyme E2-16 kDa [Us... 112 6e-24
ref|XP_001729512.1| hypothetical protein MGL_3547 [Malassez... 112 6e-24
ref|XP_001712182.1| ubc4 [Hemiselmis andersenii] >gi|160331... 112 6e-24
emb|CAL57086.1| adenine-DNA glycosylase-related / MYH-relat... 112 6e-24
ref|XP_844774.1| ubiquitin-conjugating enzyme E2, putative ... 112 7e-24
ref|NP_957404.1| hypothetical protein LOC394085 [Danio reri... 112 7e-24
ref|XP_001796916.1| hypothetical protein SNOG_06548 [Phaeos... 112 7e-24
gb|EDU41067.1| ubiquitin-conjugating enzyme E2 2 [Pyrenopho... 112 7e-24
ref|XP_001395832.1| hypothetical protein An12g07810 [Asperg... 112 7e-24
ref|NP_511150.1| bendless CG18319-PA [Drosophila melanogast... 112 7e-24
emb|CAG01241.1| unnamed protein product [Tetraodon nigrovir... 112 7e-24
ref|XP_001649243.1| ubiquitin conjugating enzyme, putative ... 112 7e-24
ref|XP_812602.1| ubiquitin-conjugating enzyme E2, putative ... 112 7e-24
ref|XP_001568232.1| ubiquitin-conjugating enzyme E2, putati... 112 8e-24
ref|XP_001848064.1| ubiquitin-conjugating enzyme E2-17 kDa ... 112 8e-24
ref|NP_609715.1| CG3473 CG3473-PA [Drosophila melanogaster]... 112 8e-24
emb|CAN73628.1| hypothetical protein [Vitis vinifera] >gi|1... 112 8e-24
sp|P78717|UBC2_NECHA Ubiquitin-conjugating enzyme E2 2 (Ubi... 112 8e-24
ref|NP_998651.1| ubiquitin-conjugating enzyme E2N [Danio re... 112 8e-24
ref|XP_001510479.1| PREDICTED: similar to Chain B, Crystal ... 112 8e-24
ref|XP_001881094.1| predicted protein [Laccaria bicolor S23... 112 8e-24
ref|XP_001823886.1| hypothetical protein [Aspergillus oryza... 112 9e-24
gb|AAF24583.1|AC007764_25 F22C12.2 [Arabidopsis thaliana] 112 9e-24
ref|NP_955865.1| ubiquitin-conjugating enzyme E2D 2 [Danio ... 112 9e-24
ref|NP_568788.1| UBC10 (UBIQUITIN-CONJUGATING ENZYME 10); u... 112 9e-24
ref|XP_001559112.1| ubiquitin-conjugating enzyme E2-17 kDa ... 112 9e-24
ref|NP_565192.1| UBC13A/UBC35 (UBIQUITIN-CONJUGATING ENZYME... 112 9e-24
ref|XP_534224.2| PREDICTED: similar to ubiquitin-conjugatin... 112 9e-24
ref|XP_001120139.1| PREDICTED: similar to Ubiquitin-conjuga... 112 9e-24
gb|ABK93279.1| unknown [Populus trichocarpa] >gi|118483536|... 112 9e-24
gb|EAY75244.1| hypothetical protein OsI_003091 [Oryza sativ... 112 1e-23
ref|XP_001495725.1| PREDICTED: similar to ubiquitin-conjuga... 112 1e-23
ref|XP_001454736.1| hypothetical protein GSPATT00020981001 ... 112 1e-23
gb|AAM63450.1| E2, ubiquitin-conjugating enzyme 10 (UBC10) ... 112 1e-23
ref|XP_001376552.1| PREDICTED: similar to Chain B, Crystal ... 112 1e-23
ref|NP_057067.1| ubiquitin-conjugating enzyme E2D 4 (putati... 112 1e-23
ref|XP_001363605.1| PREDICTED: similar to ubiquitin-conjuga... 112 1e-23
gb|ABK21242.1| unknown [Picea sitchensis] 112 1e-23
ref|XP_854681.1| PREDICTED: similar to ubiquitin-conjugatin... 112 1e-23
gb|ACO14311.1| Ubiquitin-conjugating enzyme E2 N [Esox lucius] 112 1e-23
sp|Q96UP5|UBC2_EMENI Ubiquitin-conjugating enzyme E2 2 (Ubi... 112 1e-23
ref|XP_001536297.1| ubiquitin-conjugating enzyme E2 2 [Ajel... 112 1e-23
ref|NP_849462.1| UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubi... 111 1e-23
sp|Q58FS2|UBC2_TRIHA Ubiquitin-conjugating enzyme E2 2 (Ubi... 111 1e-23
ref|NP_564011.1| UBC13B/UBC36 (UBIQUITIN-CONJUGATING ENZYME... 111 1e-23
gb|AAZ20286.1| ubiquitin-conjugating enzyme 1 [Arachis hypo... 111 1e-23
ref|XP_001887589.1| predicted protein [Laccaria bicolor S23... 111 2e-23
ref|XP_369064.1| hypothetical protein MGG_00180 [Magnaporth... 111 2e-23
ref|XP_972271.1| PREDICTED: similar to ubiquitin-conjugatin... 111 2e-23
ref|NP_731941.1| effete CG7425-PA [Drosophila melanogaster]... 111 2e-23
ref|XP_001249097.1| ubiquitin-conjugating enzyme [Coccidioi... 111 2e-23
ref|NP_564828.1| UBC28; ubiquitin-protein ligase [Arabidops... 111 2e-23
gb|AAL99222.1| ubiquitin-conjugating enzyme E2 [Gossypium h... 111 2e-23
ref|XP_001767214.1| predicted protein [Physcomitrella paten... 111 2e-23
pdb|1FXT|A Chain A, Structure Of A Conjugating Enzyme-Ubiqu... 111 2e-23
gb|AAW24799.1| SJCHGC00720 protein [Schistosoma japonicum] 111 2e-23
ref|XP_781361.1| PREDICTED: hypothetical protein [Strongylo... 111 2e-23
ref|XP_001561771.1| ubiquitin-conjugating enzyme E2, putati... 110 2e-23
ref|XP_001019555.1| Ubiquitin-conjugating enzyme family pro... 110 2e-23
ref|NP_596239.1| ubiquitin conjugating enzyme Ubc1 [Schizos... 110 2e-23
emb|CAO14917.1| unnamed protein product [Vitis vinifera] 110 2e-23
ref|NP_568956.1| UBC3 (UBIQUITIN-CONJUGATING ENZYME 3); ubi... 110 2e-23
gb|ABI84266.1| ubiquitin-conjugating enzyme 1 like protein ... 110 2e-23
ref|NP_003330.1| ubiquitin-conjugating enzyme E2D 2 isoform... 110 2e-23
pdb|2ESK|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2)... 110 2e-23
ref|XP_001209896.1| ubiquitin-conjugating enzyme E2-17 kDa ... 110 2e-23
ref|XP_001422486.1| predicted protein [Ostreococcus lucimar... 110 2e-23
ref|XP_001417769.1| predicted protein [Ostreococcus lucimar... 110 2e-23
emb|CAG03424.1| unnamed protein product [Tetraodon nigrovir... 110 3e-23
ref|XP_001223742.1| hypothetical protein CHGG_04528 [Chaeto... 110 3e-23
pdb|1Z2U|A Chain A, The 1.1a Crystallographic Structure Of ... 110 3e-23
dbj|BAA11380.1| mus-8 [Neurospora crassa] 110 3e-23
ref|XP_001268453.1| ubiquitin conjugating enzyme (UbcB), pu... 110 3e-23
emb|CAO39390.1| unnamed protein product [Vitis vinifera] 110 3e-23
gb|ABK24341.1| unknown [Picea sitchensis] >gi|116791120|gb|... 110 3e-23
ref|NP_001080830.1| ubiquitin-conjugating enzyme E2N [Xenop... 110 3e-23
gb|AAI58913.1| Unknown (protein for IMAGE:7528895) [Xenopus... 110 3e-23
ref|XP_001910347.1| unnamed protein product [Podospora anse... 110 3e-23
ref|XP_964107.1| ubiquitin-conjugating enzyme E2 13 [Neuros... 110 3e-23
ref|XP_751295.1| ubiquitin conjugating enzyme (UbcB) [Asper... 110 3e-23
ref|XP_001793346.1| hypothetical protein SNOG_02749 [Phaeos... 110 3e-23
ref|NP_001058973.1| Os07g0166800 [Oryza sativa (japonica cu... 110 3e-23
gb|AAN28744.1| At5g62540/K19B1_15 [Arabidopsis thaliana] 110 3e-23
gb|ABK93888.1| unknown [Populus trichocarpa] >gi|118487650|... 110 3e-23
emb|CAP21120.1| C. briggsae CBR-UBC-1 protein [Caenorhabdit... 110 3e-23
ref|XP_502855.1| hypothetical protein [Yarrowia lipolytica]... 110 3e-23
ref|NP_956246.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5... 110 3e-23
gb|ACO35043.1| ubiquitin-conjugating enzyme E2 D4 [Larimich... 110 3e-23
ref|XP_001524154.1| hypothetical protein LELG_04967 [Lodder... 110 3e-23
emb|CAH58636.1| Ubiquitin-conjugating enzyme [Plantago major] 110 3e-23
ref|XP_791462.1| PREDICTED: similar to ubiquitin-conjugatin... 110 3e-23
gb|EEH58578.1| predicted protein [Micromonas pusilla CCMP1545] 110 3e-23
ref|NP_957253.1| ubiquitin-conjugating enzyme E2D 3 [Danio ... 110 3e-23
ref|NP_001082922.1| hypothetical protein LOC100001914 [Dani... 110 3e-23
ref|XP_843237.1| ubiquitin-conjugating enzyme E2, putative ... 110 3e-23
ref|NP_001043834.1| Os01g0673600 [Oryza sativa (japonica cu... 110 4e-23
gb|AAC41750.1| ubiquitin conjugating enzyme >gi|1096569|prf... 110 4e-23
pdb|2C4O|B Chain B, Crystal Structure Of Human Ubiquitin-Co... 110 4e-23
ref|XP_001351827.1| ubiquitin-conjugating enzyme, putative ... 110 4e-23
gb|ACC38297.1| E2 ubiquitin-conjugating enzyme UBC10 [Brass... 110 4e-23
ref|XP_001778399.1| predicted protein [Physcomitrella paten... 110 4e-23
ref|XP_001241972.1| conserved hypothetical protein [Coccidi... 110 4e-23
gb|ABK21244.1| unknown [Picea sitchensis] >gi|116790480|gb|... 110 4e-23
ref|NP_500480.1| UBiquitin Conjugating enzyme family member... 110 4e-23
ref|XP_571364.1| ubiquitin-conjugating enzyme e2-16 kda [Cr... 110 4e-23
sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2-17 kDa... 110 4e-23
pdb|2R0J|A Chain A, Crystal Structure Of The Putative Ubiqu... 110 4e-23
ref|XP_001030175.2| ubiquitin-conjugating enzyme [Tetrahyme... 110 4e-23
ref|NP_001051522.1| Os03g0791800 [Oryza sativa (japonica cu... 110 4e-23
ref|XP_001024315.1| Ubiquitin-conjugating enzyme family pro... 110 4e-23
ref|XP_569863.1| ubiquitin-conjugating enzyme e2-24 kda [Cr... 110 4e-23
ref|NP_502065.1| LEThal family member (let-70) [Caenorhabdi... 110 4e-23
ref|NP_871622.1| ubiquitin-conjugating enzyme E2D 3 isoform... 110 4e-23
ref|XP_445717.1| unnamed protein product [Candida glabrata]... 110 5e-23
ref|NP_566331.1| UBC11 (ubiquitin-conjugating enzyme 11); u... 110 5e-23
gb|AAF73016.1|AF262934_1 ubiquitin conjugating protein [Avi... 109 5e-23
ref|XP_501290.1| hypothetical protein [Yarrowia lipolytica]... 109 5e-23
ref|XP_775030.1| hypothetical protein CNBF1930 [Cryptococcu... 109 5e-23
ref|NP_003329.1| ubiquitin-conjugating enzyme E2D 1 [Homo s... 109 5e-23
ref|XP_001094543.1| PREDICTED: similar to ubiquitin-conjuga... 109 5e-23
gb|AAP36440.1| Homo sapiens ubiquitin-conjugating enzyme E2... 109 5e-23
emb|CAO62520.1| unnamed protein product [Vitis vinifera] 109 5e-23
ref|NP_565289.1| ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2); ... 109 5e-23
ref|XP_001442337.1| hypothetical protein GSPATT00001142001 ... 109 5e-23
ref|NP_851114.1| UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubi... 109 5e-23
ref|NP_563951.1| UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiqui... 109 5e-23
ref|XP_001705864.1| Ubiquitin-conjugating enzyme E2-17 kDa ... 109 5e-23
gb|AAM62889.1| E2, ubiquitin-conjugating enzyme UBC8 [Arabi... 109 5e-23
gb|ABC01903.1| ubiquitin carrier-like protein [Solanum tube... 109 5e-23
gb|AAV34697.1| ubiquitin-conjugating enzyme [Arachis hypogaea] 109 6e-23
pdb|2ESQ|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2)... 109 6e-23
gb|AAV84587.1| ubiquitin carrier protein [Populus tomentosa... 109 6e-23
ref|XP_001764104.1| predicted protein [Physcomitrella paten... 109 6e-23
ref|XP_667408.1| ubiquitin-conjugating enzyme [Cryptosporid... 109 6e-23
gb|AAL99224.1| ubiquitin-conjugating enzyme E2 [Gossypium t... 109 6e-23
ref|XP_001550431.1| conserved hypothetical protein [Botryot... 109 6e-23
ref|XP_001798158.1| hypothetical protein SNOG_07831 [Phaeos... 109 6e-23
emb|CAJ57642.1| putative ubiquitin conjugating enzyme 2 [Oe... 109 6e-23
gb|EDM04338.1| ubiquitin-conjugating enzyme E2B, RAD6 homol... 109 6e-23
gb|ABK92844.1| unknown [Populus trichocarpa] >gi|118483532|... 109 6e-23
ref|NP_871621.1| ubiquitin-conjugating enzyme E2D 3 isoform... 109 6e-23
ref|XP_954261.1| ubiquitin-conjugating enzyme e2, putative ... 109 6e-23
ref|XP_366492.1| conserved hypothetical protein [Magnaporth... 109 6e-23
ref|XP_001593719.1| ubiquitin-conjugating enzyme E2 [Sclero... 109 6e-23
gb|EDU48517.1| ubiquitin-conjugating enzyme E2 N [Pyrenopho... 109 7e-23
ref|XP_621074.1| PREDICTED: similar to ubiquitin-conjugatin... 109 7e-23
gb|EAY85278.1| hypothetical protein OsI_006511 [Oryza sativ... 109 7e-23
ref|XP_001897862.1| ubiquitin conjugating enzyme protein 13... 109 7e-23
gb|EEH47165.1| ubiquitin-conjugating enzyme [Paracoccidioid... 109 7e-23
pdb|2C4P|A Chain A, Crystal Structure Of Human Ubiquitin-Co... 109 7e-23
gb|ABK94289.1| unknown [Populus trichocarpa] >gi|118487240|... 109 7e-23
ref|NP_001117973.1| ubiquitin-conjugating enzyme E2D 2 isof... 109 7e-23
gb|ACO13579.1| Ubiquitin-conjugating enzyme E2 D2 [Esox luc... 109 7e-23
ref|NP_199900.1| UBC27 (UBIQUITIN-CONJUGATING ENZYME 27); u... 109 7e-23
sp|P35135|UBC4_LYCES Ubiquitin-conjugating enzyme E2-17 kDa... 109 7e-23
ref|XP_001690010.1| predicted protein [Chlamydomonas reinha... 109 7e-23
ref|NP_001072141.1| UB2D2 [Sus scrofa] >gi|121957312|sp|Q06... 109 8e-23
ref|XP_766028.1| ubiquitin-protein ligase [Theileria parva ... 109 8e-23
ref|NP_033484.2| ubiquitin-conjugating enzyme E2B, RAD6 hom... 108 8e-23
dbj|BAB40311.1| ubiquitin-conjugating enzyme (E2) [Nicotian... 108 8e-23
dbj|BAB40310.1| ubiquitin-conjugating enzyme (E2) [Nicotian... 108 8e-23
gb|AAL85988.1| putative E2, ubiquitin-conjugating enzyme UB... 108 8e-23
gb|ABB55885.1| ubiquitin conjugating enzyme [Hanusia phi] 108 8e-23
ref|XP_459396.1| hypothetical protein DEHA0E02134g [Debaryo... 108 8e-23
gb|ABB55888.1| ubiquitin conjugating enzyme [Proteomonas su... 108 8e-23
emb|CAO39849.1| unnamed protein product [Vitis vinifera] 108 8e-23
emb|CAI29540.1| ubiquitin conjugating enzyme E2 [Oryza sati... 108 8e-23
ref|XP_001367781.1| PREDICTED: similar to ubiquitin conjuga... 108 8e-23
gb|EDU41418.1| ubiquitin-conjugating enzyme E2-16 kDa [Pyre... 108 8e-23
ref|NP_568835.1| UBC30 (UBIQUITIN-CONJUGATING ENZYME 30); u... 108 9e-23
gb|AAK82529.1| AT5g62540/K19B1_15 [Arabidopsis thaliana] 108 9e-23
gb|EAY75337.1| hypothetical protein OsI_003184 [Oryza sativ... 108 9e-23
gb|AAP36783.1| Homo sapiens ubiquitin-conjugating enzyme E2... 108 9e-23
ref|XP_001587931.1| ubiquitin-conjugating enzyme E2 [Sclero... 108 9e-23
ref|XP_533990.2| PREDICTED: similar to ubiquitin-conjugatin... 108 9e-23
ref|NP_849678.1| UBC13B/UBC36 (UBIQUITIN-CONJUGATING ENZYME... 108 9e-23
>ref|NP_568476.1| PEX4 (PEROXIN4); ubiquitin-protein ligase [Arabidopsis thaliana]
ref|NP_001031939.1| PEX4 (PEROXIN4); ubiquitin-protein ligase [Arabidopsis thaliana]
gb|AAM60888.1| E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana]
gb|AAY44861.1| ubiquitinating enzyme [Arabidopsis thaliana]
gb|ABF59034.1| At5g25760 [Arabidopsis thaliana]
Length = 157
Score = 325 bits (833), Expect = 6e-88, Method: Composition-based stats.
Identities = 157/157 (100%), Positives = 157/157 (100%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV
Sbjct: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
>emb|CAO44055.1| unnamed protein product [Vitis vinifera]
Length = 157
Score = 311 bits (797), Expect = 9e-84, Method: Composition-based stats.
Identities = 147/157 (93%), Positives = 154/157 (98%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
MQASRARLFKEYKEVQREK ADPDIQL+CDD+NIFKWTALIKGPSETP+EGGVFQLAF+V
Sbjct: 1 MQASRARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFAV 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61 PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCDSGNLLRSGD+RG+ SMA+MYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDIRGYQSMARMYTRLAAMPKKG 157
>ref|NP_001047515.1| Os02g0634800 [Oryza sativa (japonica cultivar-group)]
dbj|BAD25096.1| putative ubiquitin-conjugating enzyme E2 [Oryza sativa Japonica
Group]
dbj|BAD25314.1| putative ubiquitin-conjugating enzyme E2 [Oryza sativa Japonica
Group]
dbj|BAF09429.1| Os02g0634800 [Oryza sativa (japonica cultivar-group)]
Length = 157
Score = 310 bits (793), Expect = 3e-83, Method: Composition-based stats.
Identities = 147/157 (93%), Positives = 153/157 (97%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
MQASRARLFKEYKEVQREK ADPDIQLICDD+NIFKWTALIKGPSETP+EGGVFQLAFS+
Sbjct: 1 MQASRARLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSI 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YPL PPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61 PEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCDSGNLLRSGD+RG+ SMA+MYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDIRGYQSMARMYTRLAAMPKKG 157
>gb|ABK94752.1| unknown [Populus trichocarpa]
Length = 157
Score = 309 bits (792), Expect = 3e-83, Method: Composition-based stats.
Identities = 148/157 (94%), Positives = 152/157 (96%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
MQASRARLFKEYKEVQREKVADPDIQ+ CDDTNIFKWTALIKGPSETP+EGGVFQL FSV
Sbjct: 1 MQASRARLFKEYKEVQREKVADPDIQIACDDTNIFKWTALIKGPSETPFEGGVFQLVFSV 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61 PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCDSGNLLRSGDVRG+ SMA+MYTRLAA PKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAASPKKG 157
>gb|ACA24139.1| ubiquitin-conjugating enzyme [Lolium temulentum]
Length = 155
Score = 303 bits (777), Expect = 2e-81, Method: Composition-based stats.
Identities = 143/155 (92%), Positives = 150/155 (96%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
ASRARLFKEYKEVQREK ADPDIQLICDD+NIFKWTA+IKGPSETP+EGGVFQLAFS+PE
Sbjct: 1 ASRARLFKEYKEVQREKSADPDIQLICDDSNIFKWTAIIKGPSETPFEGGVFQLAFSIPE 60
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YPL PPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPE DS
Sbjct: 61 QYPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEADS 120
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
PLNCDSGNLLRSGD+RG+ SMA+MYTRLAAMPKKG
Sbjct: 121 PLNCDSGNLLRSGDIRGYQSMARMYTRLAAMPKKG 155
>gb|ABK23891.1| unknown [Picea sitchensis]
Length = 160
Score = 283 bits (723), Expect = 4e-75, Method: Composition-based stats.
Identities = 134/157 (85%), Positives = 141/157 (89%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
MQASRARLFKEYKEVQR+K D DI+L CDDTNIFKWTALIKGPSETPY+ GVF LA +V
Sbjct: 2 MQASRARLFKEYKEVQRDKSGDSDIKLSCDDTNIFKWTALIKGPSETPYQEGVFLLAMTV 61
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YPL PPQVRF+TKIFHPNVHFKTGEICLDILK AWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 62 PEQYPLVPPQVRFVTKIFHPNVHFKTGEICLDILKTAWSPAWTLQSVCRAIIALMAHPEP 121
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCD GNLLRSGD RG+ SMA+MYTRLAA KG
Sbjct: 122 DSPLNCDCGNLLRSGDDRGYQSMARMYTRLAATANKG 158
>gb|ABR26629.1| ubiquitin conjugating enzyme [Lolium perenne]
Length = 139
Score = 273 bits (699), Expect = 2e-72, Method: Composition-based stats.
Identities = 127/139 (91%), Positives = 134/139 (96%)
Query: 10 KEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPP 69
KEYKEVQREK ADPDIQLICDD+NIFKWTALIKGPSETP+EGGVFQLAFS+PE YPL PP
Sbjct: 1 KEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPP 60
Query: 70 QVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSG 129
QVRF+TKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPE DSPLNCDSG
Sbjct: 61 QVRFMTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEADSPLNCDSG 120
Query: 130 NLLRSGDVRGFNSMAQMYT 148
NLLRSGD+RG+ SMA+MYT
Sbjct: 121 NLLRSGDIRGYQSMARMYT 139
>ref|XP_001773168.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ62021.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 163
Score = 270 bits (691), Expect = 2e-71, Method: Composition-based stats.
Identities = 124/157 (78%), Positives = 136/157 (86%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
M SRARLFKEYKEV REK D DIQL CDDTNI++WTA IKGP +TPY+ GVFQLA +V
Sbjct: 1 MTTSRARLFKEYKEVHREKGGDNDIQLTCDDTNIYRWTAYIKGPVDTPYQEGVFQLAVNV 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YPL PPQVRF+TKIFHPNVHFKTGEICLDILK AWSPAWTLQSVCRA+IAL+AHPE
Sbjct: 61 PEQYPLVPPQVRFVTKIFHPNVHFKTGEICLDILKTAWSPAWTLQSVCRAVIALLAHPEA 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCD+GNLLRSGD RG+ SM+QMYTRL A+ G
Sbjct: 121 DSPLNCDAGNLLRSGDHRGYRSMSQMYTRLCAVHSNG 157
>ref|XP_001697709.1| hypothetical protein CHLREDRAFT_131472 [Chlamydomonas reinhardtii]
gb|EDO99861.1| predicted protein [Chlamydomonas reinhardtii]
Length = 153
Score = 228 bits (580), Expect = 1e-58, Method: Composition-based stats.
Identities = 102/148 (68%), Positives = 123/148 (83%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
M +R RL KEYKE ++K D I LI ++TN+F W A+++GP ETP+EGGVF+L +V
Sbjct: 1 MATARQRLLKEYKEALKQKSEDTGITLIPNETNLFAWRAVLRGPKETPFEGGVFELVINV 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YPLQPP VR+ TKIFHPNVHFKTGEICLDILKNAWSPAWTL SVC+A++ALM+ P P
Sbjct: 61 PEQYPLQPPAVRYRTKIFHPNVHFKTGEICLDILKNAWSPAWTLHSVCQAVLALMSDPAP 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYT 148
DSPLNCD+GNLLR GD RG+NS+A+MYT
Sbjct: 121 DSPLNCDAGNLLRFGDTRGYNSLARMYT 148
>gb|ABY75232.1| uqibuitin-protein ligase-like protein [Salvia officinalis]
Length = 108
Score = 207 bits (528), Expect = 1e-52, Method: Composition-based stats.
Identities = 96/101 (95%), Positives = 98/101 (97%)
Query: 8 LFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQ 67
FKEYKEVQREK ADPDIQL+CDD+NIFKWTALIKGPSETPYEGGVFQLAFSVPE YPLQ
Sbjct: 8 FFKEYKEVQREKTADPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFSVPEQYPLQ 67
Query: 68 PPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVC 108
PPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVC
Sbjct: 68 PPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVC 108
>gb|AAN16047.1| ubiquitin-conjugating enzyme E2 [Pavlova lutheri]
Length = 166
Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats.
Identities = 97/149 (65%), Positives = 119/149 (79%), Gaps = 3/149 (2%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDTN-IFKWTALIKGPSETPYEGGVFQLAFSVPEPYP 65
RL KEY+E+ R K DP+I L ++ N + +W A+++GP TPYEGG F+L + YP
Sbjct: 5 RLMKEYREISRGK-RDPEISLRLENENSLLRWHAVLQGPPGTPYEGGRFELKIACTSTYP 63
Query: 66 LQPPQVRFLTKIFHPNVHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHPEPDSPL 124
L PPQVRF+T +FHPNV FKTGEICLDILK +AW+PAWTLQSVCRA+ AL++ PE DSPL
Sbjct: 64 LTPPQVRFVTNVFHPNVLFKTGEICLDILKEDAWTPAWTLQSVCRAVTALLSSPEADSPL 123
Query: 125 NCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
NCD+GNL+RSGDVRGF SMAQMYT+L AM
Sbjct: 124 NCDAGNLIRSGDVRGFASMAQMYTQLHAM 152
>ref|XP_643940.1| putative ubiquitin-conjugating enzyme E2 [Dictyostelium discoideum
AX4]
gb|AAO51851.1| similar to Arabidopsis thaliana (Mouse-ear cress). E2,
ubiquitin-conjugating enzyme, putative [Dictyostelium
discoideum]
gb|EAL70049.1| putative ubiquitin-conjugating enzyme E2 [Dictyostelium discoideum
AX4]
Length = 149
Score = 200 bits (509), Expect = 3e-50, Method: Composition-based stats.
Identities = 90/145 (62%), Positives = 119/145 (82%), Gaps = 1/145 (0%)
Query: 6 ARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYP 65
ARL KEYK +Q E+ D + D++++++W A+IKGP +TPYE G F+L SVP YP
Sbjct: 3 ARLMKEYKVLQNEEFEDI-LLYPRDESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYP 61
Query: 66 LQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 125
LQPP ++F+TKIFHPN+HFKTGEICLD+LK +WS +TLQSVCR+IIAL++ PE DSPLN
Sbjct: 62 LQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRSIIALLSLPEADSPLN 121
Query: 126 CDSGNLLRSGDVRGFNSMAQMYTRL 150
CD+GNL+R+GDV+G +S+A+MYTRL
Sbjct: 122 CDAGNLIRNGDVKGHDSLARMYTRL 146
>ref|XP_952557.1| ubiquitin-conjugating enzyme e2, putative [Theileria annulata
strain Ankara]
emb|CAI74825.1| ubiquitin-conjugating enzyme e2, putative [Theileria annulata]
Length = 157
Score = 192 bits (488), Expect = 5e-48, Method: Composition-based stats.
Identities = 83/148 (56%), Positives = 112/148 (75%), Gaps = 2/148 (1%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
M +R RL KE KE K+ DP+I+L ++NIF WTA I+GP TP+E G+F+L
Sbjct: 1 MSLARGRLIKEMKEAS--KLDDPNIKLYVSNSNIFNWTAYIRGPEGTPFESGIFKLLIHC 58
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
P YP+QPP V F+TK FHPN++F+TGE+C+DILK+ WSPAWT+Q +CR +I +++ P P
Sbjct: 59 PNSYPIQPPTVHFVTKCFHPNINFQTGELCIDILKSNWSPAWTIQYLCRGVIYILSSPNP 118
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYT 148
DSPLNCD+GNL+R GD+ G+ SMA+MYT
Sbjct: 119 DSPLNCDAGNLVRYGDLIGYKSMAKMYT 146
>ref|XP_764725.1| ubiquitin-protein ligase [Theileria parva strain Muguga]
gb|EAN32442.1| ubiquitin-protein ligase, putative [Theileria parva]
Length = 157
Score = 189 bits (481), Expect = 4e-47, Method: Composition-based stats.
Identities = 84/153 (54%), Positives = 112/153 (73%), Gaps = 2/153 (1%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
M +R RL KE KE K+ DP+I+L +NIF WTA I+GP TP+E G+F+L
Sbjct: 1 MSLARGRLIKELKEAS--KMDDPNIKLHVSASNIFNWTAYIRGPEGTPFESGIFKLLIHC 58
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
P YP+QPP V F TK FHPN++F+TGE+C+DILK+ WSPAWT+Q +CR +I +++ P P
Sbjct: 59 PNSYPIQPPTVHFATKCFHPNINFQTGELCIDILKSNWSPAWTIQYLCRGVIYILSTPNP 118
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
DSPLNCD+GNL+R GD+ G+ SMA+MYT A+
Sbjct: 119 DSPLNCDAGNLVRYGDLIGYKSMAKMYTHEHAL 151
>ref|XP_675637.1| ubiquitin-conjugating enzyme E2 [Plasmodium berghei strain ANKA]
emb|CAH99596.1| ubiquitin-conjugating enzyme E2, putative [Plasmodium berghei]
Length = 149
Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats.
Identities = 79/150 (52%), Positives = 112/150 (74%), Gaps = 2/150 (1%)
Query: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
++ RL E +E +++ DPDI L D N+++W A+IKGP ++PYEGG ++L+
Sbjct: 2 AKNRLLIESREAKKQN--DPDIFLSHSDYNLYEWEAIIKGPKDSPYEGGKWKLSIKCKST 59
Query: 64 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
YP+ PP + F+TK+FHPNV+F TG +C+DILK WSPAWT+QS+CRAI+ L+ P +SP
Sbjct: 60 YPIDPPMITFITKVFHPNVNFTTGALCMDILKTNWSPAWTIQSLCRAILFLLNEPNAESP 119
Query: 124 LNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
LNCD+GNL+R GD++GF SMA+MYT+ AM
Sbjct: 120 LNCDAGNLIRFGDIKGFKSMAKMYTKEYAM 149
>ref|XP_966052.1| ubiquitin-conjugating enzyme E2, putative [Plasmodium falciparum
3D7]
emb|CAG25232.1| ubiquitin-conjugating enzyme E2, putative [Plasmodium falciparum
3D7]
Length = 155
Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats.
Identities = 80/150 (53%), Positives = 110/150 (73%), Gaps = 2/150 (1%)
Query: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
++ RL E +E +++ DPDI L + N+++W A+I+GP ++PYEGG ++L
Sbjct: 2 TKNRLLIESREAKKQN--DPDISLTHSEYNLYEWQAVIRGPKDSPYEGGKWKLNIKCKST 59
Query: 64 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
YP+ PP + F+TK FHPNV+F TGE+C+DILK WSPAWT+QS+CRAI+ L P DSP
Sbjct: 60 YPIDPPLITFVTKFFHPNVNFVTGELCMDILKANWSPAWTIQSLCRAILFLFNEPNADSP 119
Query: 124 LNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
LNCD+GNL+RSGD++GF SMA+MYT AM
Sbjct: 120 LNCDAGNLIRSGDIKGFQSMARMYTVEYAM 149
>ref|XP_001022900.1| Ubiquitin-conjugating enzyme family protein [Tetrahymena
thermophila SB210]
gb|EAS02655.1| Ubiquitin-conjugating enzyme family protein [Tetrahymena
thermophila SB210]
Length = 901
Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats.
Identities = 74/152 (48%), Positives = 113/152 (74%), Gaps = 1/152 (0%)
Query: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
+++R+ KE E + K + + L+ D+ +IFKW A I GP ++PY G+F+L ++P
Sbjct: 737 NKSRILKEANEAAKLKEKE-NFVLLFDENDIFKWKAFIVGPEDSPYSDGIFELGINLPSN 795
Query: 64 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
YP+Q PQV F T+IFHPN+H++TGEICL+++K+ WSP WTL+++CRA+ LM++P DSP
Sbjct: 796 YPIQAPQVIFKTRIFHPNIHWETGEICLNVVKDEWSPYWTLEALCRAVQQLMSNPNADSP 855
Query: 124 LNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPK 155
LNCD+GNL+RSGD+ G+ S+A++ T A+ K
Sbjct: 856 LNCDAGNLVRSGDMDGYLSLARVLTDEYAIQK 887
>ref|XP_846929.1| ubiquitin-conjugating enzyme E2, putative [Trypanosoma brucei
TREU927]
gb|AAX69380.1| ubiquitin-conjugating enzyme E2, putative [Trypanosoma brucei]
gb|AAZ12863.1| ubiquitin-conjugating enzyme E2, putative [Trypanosoma brucei]
Length = 172
Score = 175 bits (444), Expect = 8e-43, Method: Composition-based stats.
Identities = 82/143 (57%), Positives = 107/143 (74%), Gaps = 3/143 (2%)
Query: 6 ARLFKEYKEVQREKVADPDIQL-ICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPY 64
+RL KE KEVQR+ D D+ L + + N+F W A++ GP +TPYEGG F L +P Y
Sbjct: 18 SRLSKELKEVQRD--PDNDVVLKLAESNNLFSWEAVLDGPPDTPYEGGSFCLRLQIPPDY 75
Query: 65 PLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPL 124
P+ PP F+TK+FHPNV+F TG +CLDILK+ WSPAWT+ SVCRAII+L+ P+ SP
Sbjct: 76 PMVPPVAWFVTKVFHPNVNFDTGAVCLDILKSRWSPAWTISSVCRAIISLLTEPDARSPF 135
Query: 125 NCDSGNLLRSGDVRGFNSMAQMY 147
NCD+GNLLR+GDV G+NS+A+MY
Sbjct: 136 NCDAGNLLRAGDVMGYNSLARMY 158
>ref|XP_731132.1| ubiquitin-conjugating enzyme E2 [Plasmodium yoelii yoelii str.
17XNL]
gb|EAA22697.1| probable ubiquitin-conjugating enzyme e2-17 kDa [Plasmodium yoelii
yoelii]
Length = 180
Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats.
Identities = 71/123 (57%), Positives = 98/123 (79%)
Query: 31 DTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEIC 90
D N+++W A+IKGP ++PYEGG ++L+ YP+ PP + F+TK+FHPNV+F TG +C
Sbjct: 58 DYNLYEWEAIIKGPKDSPYEGGKWKLSIKCKSTYPIDPPMITFITKVFHPNVNFTTGALC 117
Query: 91 LDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRL 150
+DILK WSPAWT+QS+CRAI+ L+ P +SPLNCD+GNL+R GD++GFNSMA+MYT+
Sbjct: 118 MDILKTNWSPAWTIQSLCRAILFLLNEPNAESPLNCDAGNLIRFGDIKGFNSMAKMYTKE 177
Query: 151 AAM 153
AM
Sbjct: 178 YAM 180
>ref|XP_813834.1| ubiquitin-conjugating enzyme E2, putative [Trypanosoma cruzi strain
CL Brener]
gb|EAN91983.1| ubiquitin-conjugating enzyme E2, putative [Trypanosoma cruzi]
Length = 160
Score = 174 bits (440), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/152 (51%), Positives = 109/152 (71%), Gaps = 1/152 (0%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
M + RL KE +E +D D+ L+ ++F W A+++GP +TP+EGG ++L +
Sbjct: 1 MSTALKRLSKELREASLNPDSDMDLHLL-HAGSLFTWEAVLRGPPDTPFEGGEYRLLLRI 59
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
P+ YP+ PP F+TK+FHPNV+F TG +CLDILK+ WSPAWTL SVCRAI+ L+A PEP
Sbjct: 60 PQDYPMLPPTANFVTKVFHPNVNFDTGAVCLDILKSRWSPAWTLNSVCRAILNLLAEPEP 119
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAA 152
DSP NCD+GNLLR+GD+ G+ S+ +MY + A
Sbjct: 120 DSPYNCDAGNLLRAGDMEGYASLVRMYAIMDA 151
>ref|XP_001612120.1| ubiquitin-conjugating enzyme E2, putative [Babesia bovis]
gb|EDO08552.1| ubiquitin-conjugating enzyme E2, putative [Babesia bovis]
Length = 155
Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats.
Identities = 81/155 (52%), Positives = 109/155 (70%), Gaps = 2/155 (1%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
M +R RL KE KE R DP+I+L ++NI W A I+G +PYE G+F+L
Sbjct: 1 MVLARNRLLKELKESSRTD--DPNIRLEPVNSNIHHWHAYIRGLKNSPYEKGIFKLNILC 58
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
P YP+ PP V+F+TK FHPN++F+TGE+C+DILK+ WSPAWTLQ +C+ I ++ P
Sbjct: 59 PPNYPINPPAVKFITKCFHPNINFETGELCMDILKSNWSPAWTLQYLCKGITYILDDPNA 118
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPK 155
DSPLNCD+GNL+RSGD+ G+ SMA+MYT A+ K
Sbjct: 119 DSPLNCDAGNLIRSGDLIGYRSMAEMYTVDCALDK 153
>ref|XP_812539.1| ubiquitin-conjugating enzyme E2, putative [Trypanosoma cruzi strain
CL Brener]
gb|EAN90688.1| ubiquitin-conjugating enzyme E2, putative [Trypanosoma cruzi]
Length = 160
Score = 172 bits (436), Expect = 6e-42, Method: Composition-based stats.
Identities = 78/152 (51%), Positives = 109/152 (71%), Gaps = 1/152 (0%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
M + RL KE +E +D D+ L+ ++F W A+++GP +TP+EGG ++L +
Sbjct: 1 MSTALKRLSKELREASLNPDSDMDLHLL-HAGSLFTWEAVLRGPPDTPFEGGEYRLLLRI 59
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
P+ YP+ PP F+TK+FHPNV+F TG +CLDILK+ WSPAWTL SVCRAI+ L+A PEP
Sbjct: 60 PQDYPMLPPTANFVTKVFHPNVNFDTGAVCLDILKSRWSPAWTLNSVCRAILNLLAEPEP 119
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAA 152
DSP NCD+GNLLR+GD+ G+ S+ +MY + A
Sbjct: 120 DSPYNCDAGNLLRAGDMEGYASLVRMYAIMDA 151
>ref|XP_746022.1| ubiquitin-conjugating enzyme E2 [Plasmodium chabaudi chabaudi]
emb|CAH82244.1| ubiquitin-conjugating enzyme E2, putative [Plasmodium chabaudi]
Length = 124
Score = 169 bits (428), Expect = 6e-41, Method: Composition-based stats.
Identities = 68/119 (57%), Positives = 96/119 (80%)
Query: 31 DTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEIC 90
D N+++W A+I+GP ++PYEGG ++L+ YP+ PP + F+TK+FHPNV+F TG +C
Sbjct: 2 DYNLYEWEAVIRGPKDSPYEGGKWKLSIKCKNTYPIDPPLITFITKVFHPNVNFTTGALC 61
Query: 91 LDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTR 149
+DILK WSPAWT+QS+CRAI+ L+ P +SPLNCD+GNL+RSGD++GF SMA+MYT+
Sbjct: 62 MDILKTNWSPAWTIQSLCRAILFLLNEPNAESPLNCDAGNLIRSGDIKGFKSMAKMYTK 120
>ref|XP_001713233.1| ubiquitin-conjugating enzyme E2-21 KD [Guillardia theta]
emb|CAC27017.1| ubiquitin-conjugating enzyme E2-21 KD [Guillardia theta]
Length = 144
Score = 160 bits (406), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/143 (51%), Positives = 102/143 (71%), Gaps = 2/143 (1%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+S RL KEY ++++ + +I+ DD ++KW I GP+ TPY+G F + SVP
Sbjct: 2 SSTGRLLKEYNDIKKNIEININIKPYEDD--LYKWKGFIIGPNGTPYQGKSFNIECSVPL 59
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YPL PP++ F+ +IFHPNV+ GEICLDILKN W+PAWT+ C+AII L+ +PEP+S
Sbjct: 60 SYPLSPPKITFVDQIFHPNVYPSNGEICLDILKNQWTPAWTILFSCQAIIVLLTNPEPNS 119
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQ 145
PLNCD+GN LRS D RGF+S+A+
Sbjct: 120 PLNCDAGNFLRSKDYRGFSSIAK 142
>ref|XP_001562585.1| ubiquitin carrier protein, putative [Leishmania braziliensis
MHOM/BR/75/M2904]
emb|CAM41702.1| ubiquitin carrier protein, putative; ubiquitin-conjugating enzyme
E2, putative; ubiquitin-protein ligase, putative
[Leishmania braziliensis]
Length = 180
Score = 160 bits (404), Expect = 3e-38, Method: Composition-based stats.
Identities = 79/162 (48%), Positives = 100/162 (61%), Gaps = 23/162 (14%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDT---------------------NIFKWTALIKGPS 45
RL KE KE DPDI L D ++ W A++KGP
Sbjct: 7 RLGKELKEATEH--PDPDIHLELYDPAKGNDAGRSSQGVALQSSQQPGLYSWLAILKGPP 64
Query: 46 ETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQ 105
+TP+EGG ++L S+P YPL PP+ F+TK+FHPNV F TG +CLDILK WSP WTL
Sbjct: 65 DTPFEGGRYRLVLSIPHEYPLVPPKAAFITKVFHPNVEFNTGNVCLDILKKRWSPVWTLS 124
Query: 106 SVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMY 147
SVCRAI+ L+A PE DSP NCD+GNLLR+GD+ G+ S+ + Y
Sbjct: 125 SVCRAILNLLAEPESDSPFNCDAGNLLRAGDMEGYASLVRYY 166
>ref|XP_001388390.1| ubiquitin-conjugating enzyme E2, putative [Cryptosporidium parvum
Iowa II]
gb|EAZ51583.1| ubiquitin-conjugating enzyme E2, putative [Cryptosporidium parvum
Iowa II]
Length = 137
Score = 160 bits (404), Expect = 3e-38, Method: Composition-based stats.
Identities = 66/118 (55%), Positives = 92/118 (77%)
Query: 31 DTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEIC 90
+ ++ W I GP ETPYEG VF++ V YP+ PP V+F+T IFHPNV+F TGE+C
Sbjct: 12 ENDLMYWDGEIVGPDETPYEGFVFKIEIIVSPQYPILPPSVKFVTPIFHPNVNFFTGEVC 71
Query: 91 LDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYT 148
+D++K+ W+PAWTL +VCRAII+++ P P+SPLNCD+GN+LR GD +GFN+MA+MY+
Sbjct: 72 IDVIKDNWTPAWTLHAVCRAIISILCDPNPNSPLNCDAGNILRCGDKKGFNNMARMYS 129
>ref|XP_001712272.1| uceE2 [Hemiselmis andersenii]
gb|ABW97947.1| uceE2 [Hemiselmis andersenii]
Length = 151
Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 4/153 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
++ RL KE+ E+++ +D + L ++ N+ +W ++GP TPY+ G F + +
Sbjct: 2 STSNRLLKEFNEIKKN--SDKSVILSPEEDNLHEWKGKLRGPFATPYQEGFFDIFCQISN 59
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YPL PP+++F TKIFHPN+H +TGEICLDILK+ WSP WTL V +AI+ L+++PEP+S
Sbjct: 60 SYPLNPPEIKFKTKIFHPNIHPQTGEICLDILKSEWSPVWTLLYVFQAILILLSNPEPNS 119
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPK 155
PLNCD+GNLLR+ D RGF+S+A +Y + +PK
Sbjct: 120 PLNCDAGNLLRNSDFRGFSSLALIYKNI--IPK 150
>ref|XP_001429388.1| hypothetical protein GSPATT00032222001 [Paramecium tetraurelia
strain d4-2]
emb|CAK61990.1| unnamed protein product [Paramecium tetraurelia]
Length = 167
Score = 159 bits (402), Expect = 6e-38, Method: Composition-based stats.
Identities = 67/151 (44%), Positives = 104/151 (68%), Gaps = 2/151 (1%)
Query: 5 RARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPY 64
R RL KE ++Q K+ DP + + ++T++ W+ + GP +TP+E G+F++ S+P+ Y
Sbjct: 4 RPRLMKEQHDLQ--KLNDPTMIIQVNETDLLNWSVYLFGPEDTPFENGIFKIKVSIPQNY 61
Query: 65 PLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPL 124
P+ P + F T+IFHPNVH TGE+CL++L W P WT++S+ RA+ ++ P PDSPL
Sbjct: 62 PISAPTLHFQTRIFHPNVHMDTGEVCLEVLSQKWEPRWTIESIIRAVRLMLQEPNPDSPL 121
Query: 125 NCDSGNLLRSGDVRGFNSMAQMYTRLAAMPK 155
NCD+ NLLR+ D+ G+ S+AQ YT+ A+ K
Sbjct: 122 NCDAANLLRANDLIGYKSIAQYYTKKYAIDK 152
>ref|XP_001732550.1| hypothetical protein MGL_0325 [Malassezia globosa CBS 7966]
gb|EDP45336.1| hypothetical protein MGL_0325 [Malassezia globosa CBS 7966]
Length = 169
Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats.
Identities = 70/129 (54%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
Query: 24 DIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVH 83
D++ I DD ++ W A++ P + Y+GG F++ VPE YP++PP + F T+IFHPNVH
Sbjct: 37 DLRPINDD-DLRSWRAILHAPVDGMYKGGYFEVHIQVPETYPMKPPTMHFRTRIFHPNVH 95
Query: 84 FKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSM 143
+KTGEICLD+LK WSPAW+L S C A++AL+ PE DSPLN D+ NLLR+GD + SM
Sbjct: 96 WKTGEICLDVLKTQWSPAWSLHSACTAVVALLDSPEADSPLNVDAANLLRTGDHIAYRSM 155
Query: 144 AQMYTRLAA 152
MYTRL A
Sbjct: 156 CAMYTRLYA 164
>ref|XP_001680996.1| ubiquitin carrier protein, putative; ubiquitin-conjugating enzyme
E2, putative; ubiquitin-protein ligase, putative
[Leishmania major]
emb|CAJ07051.1| ubiquitin carrier protein, putative; ubiquitin-conjugating enzyme
E2, putative; ubiquitin-protein ligase, putative
[Leishmania major]
Length = 182
Score = 157 bits (396), Expect = 3e-37, Method: Composition-based stats.
Identities = 78/163 (47%), Positives = 99/163 (60%), Gaps = 24/163 (14%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDTN----------------------IFKWTALIKGP 44
RL KE KE DPDI L D ++ W A++KGP
Sbjct: 7 RLGKELKEATEH--PDPDIHLELYDPTKGSDGSRSSQGAALQPSQQQPGLYTWLAILKGP 64
Query: 45 SETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTL 104
+TP+ GG ++L S+P YPL PP+ F+TK+FHPNV F TG +CLDILK WSP WTL
Sbjct: 65 PDTPFAGGSYRLVLSIPHEYPLVPPKAAFITKVFHPNVEFNTGNVCLDILKKRWSPVWTL 124
Query: 105 QSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMY 147
SVCRAI+ L+A PE DSP NCD+GNLLR+GD+ G+ S+ + Y
Sbjct: 125 SSVCRAILNLLAEPESDSPFNCDAGNLLRAGDMEGYASLVRYY 167
>ref|XP_001463302.1| ubiquitin carrier protein, putative [Leishmania infantum JPCM5]
emb|CAM65659.1| ubiquitin carrier protein, putative; ubiquitin-conjugating enzyme
E2, putative; ubiquitin-protein ligase, putative
[Leishmania infantum]
Length = 182
Score = 156 bits (395), Expect = 4e-37, Method: Composition-based stats.
Identities = 78/163 (47%), Positives = 99/163 (60%), Gaps = 24/163 (14%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDTN----------------------IFKWTALIKGP 44
RL KE KE DPDI L D ++ W A++KGP
Sbjct: 7 RLGKELKEATEH--PDPDIHLELYDPTKGSNSSRSSQGAASQPSQQQPGLYTWLAILKGP 64
Query: 45 SETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTL 104
+TP+ GG ++L S+P YPL PP+ F+TK+FHPNV F TG +CLDILK WSP WTL
Sbjct: 65 PDTPFAGGSYRLVLSIPHEYPLVPPKAAFITKVFHPNVEFNTGNVCLDILKKRWSPVWTL 124
Query: 105 QSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMY 147
SVCRAI+ L+A PE DSP NCD+GNLLR+GD+ G+ S+ + Y
Sbjct: 125 SSVCRAILNLLAEPESDSPFNCDAGNLLRAGDMEGYASLVRYY 167
>ref|NP_595078.1| ubiquitin conjugating enzyme Ubc16 [Schizosaccharomyces pombe
972h-]
sp|Q9P6I1|UBC16_SCHPO Ubiquitin-conjugating enzyme E2 16 (Ubiquitin-protein ligase 16)
(Ubiquitin carrier protein 16)
emb|CAB91184.2| ubiquitin conjugating enzyme Ubc16 [Schizosaccharomyces pombe]
Length = 160
Score = 153 bits (386), Expect = 4e-36, Method: Composition-based stats.
Identities = 73/155 (47%), Positives = 99/155 (63%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
M +S RL KEY Q ++ + D ++F W A+I+GP+ETPYEGG + L V
Sbjct: 1 MNSSIKRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHV 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
E YP+ PP V F TKI HPN+ + GE+C+DILK WSPAW+LQS C AII+L+++ +
Sbjct: 61 HEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDA 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPK 155
SPLN D+ LLR+GD +NS+ + T L A K
Sbjct: 121 SSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKGK 155
>ref|XP_503549.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG79130.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 153
Score = 151 bits (382), Expect = 1e-35, Method: Composition-based stats.
Identities = 69/148 (46%), Positives = 99/148 (66%), Gaps = 7/148 (4%)
Query: 3 ASRARLFKEYKEVQREKVADPD---IQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFS 59
AS+ RL KE ++ DP+ L D +++KWTA+++G T YE G++Q+ +
Sbjct: 2 ASQKRLIKELAAYKK----DPNPCLASLTADGDSLYKWTAVMRGTEGTAYENGLWQVEIN 57
Query: 60 VPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPE 119
+PE YPLQPP + F TKI HPN+HF+TGE+C+D+LK WSPAWT+ S C A+ A+++ PE
Sbjct: 58 IPENYPLQPPTMFFRTKICHPNIHFETGEVCIDVLKTQWSPAWTISSACTAVSAMLSLPE 117
Query: 120 PDSPLNCDSGNLLRSGDVRGFNSMAQMY 147
PDSPLN D+ NL+R GD + + Y
Sbjct: 118 PDSPLNIDAANLVRCGDESAMEGLVRYY 145
>ref|XP_001432721.1| hypothetical protein GSPATT00034803001 [Paramecium tetraurelia
strain d4-2]
emb|CAK65324.1| unnamed protein product [Paramecium tetraurelia]
Length = 167
Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats.
Identities = 65/151 (43%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
Query: 5 RARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPY 64
R R+ KE ++Q K+ DP + + ++T+I W + GP ++P+E G+F++ S+P Y
Sbjct: 4 RPRIMKEQNDLQ--KLNDPTMIIQINETDILIWHVYLHGPQDSPFEDGIFKIKVSIPSNY 61
Query: 65 PLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPL 124
P+ P + F T+IFHPNVH TGE+CL++L W P WT++SV RA+ ++ P P SPL
Sbjct: 62 PISAPTLHFQTRIFHPNVHMDTGEVCLEVLSQKWEPRWTIESVLRAVRLMLQEPNPYSPL 121
Query: 125 NCDSGNLLRSGDVRGFNSMAQMYTRLAAMPK 155
NCD+ NLL++ D+ G+ S+AQ YT A+ K
Sbjct: 122 NCDAANLLKANDLIGYKSIAQYYTSKYAIDK 152
>ref|XP_001310926.1| Ubiquitin-conjugating enzyme family protein [Trichomonas vaginalis
G3]
gb|EAX97996.1| Ubiquitin-conjugating enzyme family protein [Trichomonas vaginalis
G3]
Length = 162
Score = 150 bits (378), Expect = 4e-35, Method: Composition-based stats.
Identities = 69/141 (48%), Positives = 97/141 (68%), Gaps = 2/141 (1%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
R+ KE + Q++K +I L ++ +I W +IK P +T + G F+L + + YP+
Sbjct: 6 RILKELR--QQKKDNSDEIWLESEEEDIRHWYGMIKAPEDTAFAGHYFKLDIVLKDGYPI 63
Query: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
+PPQ +F+TKIFHPN+ FK G ICLDILK W+PAWT+ S+C AI L++HPEPDSPLN
Sbjct: 64 EPPQAKFITKIFHPNISFKDGTICLDILKTEWTPAWTINSLCTAIRLLLSHPEPDSPLNT 123
Query: 127 DSGNLLRSGDVRGFNSMAQMY 147
+GNLLR D G++SMA+ Y
Sbjct: 124 LAGNLLRYNDQIGYDSMAKFY 144
>ref|XP_001616087.1| ubiquitin-conjugating enzyme E2 I, putative [Plasmodium vivax
SaI-1]
gb|EDL46360.1| ubiquitin-conjugating enzyme E2 I, putative [Plasmodium vivax]
Length = 132
Score = 150 bits (378), Expect = 4e-35, Method: Composition-based stats.
Identities = 65/126 (51%), Positives = 90/126 (71%), Gaps = 2/126 (1%)
Query: 4 SRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
++ RL E +E +++ DPDI L D N+++W A+I+GP ++PYEGG ++L
Sbjct: 2 TKNRLLIESREAKKQN--DPDITLTHSDYNLYEWQAVIRGPKDSPYEGGRWKLNIKCKST 59
Query: 64 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
YP+ PP + F+TK FHPNV+F TGE+C+DILK WSPAWT+QS+CRAI+ L P DSP
Sbjct: 60 YPIDPPVITFVTKFFHPNVNFVTGELCMDILKANWSPAWTIQSLCRAILFLFTEPNADSP 119
Query: 124 LNCDSG 129
LNCD+G
Sbjct: 120 LNCDAG 125
>pdb|2PWQ|A Chain A, Crystal Structure Of A Putative Ubiquitin Conjugating
Enzyme From Plasmodium Yoelii
Length = 216
Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
RL KE K+++ E V + D + D+N F+W IKGP TPYEGG F LA ++P YP
Sbjct: 27 RLQKELKDIENENVQEIDAHI--KDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPY 84
Query: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+++F+TKI+HPN+ +TG ICLD+LKN WSPA T+++ +I AL++ P+PD P +
Sbjct: 85 NPPKIKFVTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDA 144
Query: 127 DSGNLLRSGDVRGFNSMAQMYTR-LAAMPKK 156
+ + + F A ++T+ A PK+
Sbjct: 145 EVAKMYKENHAL-FVKTASVWTKTFATGPKE 174
>sp|O60015|UBCX_PICAN Ubiquitin-conjugating enzyme E2-21 kDa (Ubiquitin-protein ligase)
(Ubiquitin carrier protein) (Peroxin-4)
gb|AAC16238.1| ubiquitin-conjugating enzyme homolog peroxin 4 [Pichia angusta]
Length = 188
Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats.
Identities = 69/176 (39%), Positives = 101/176 (57%), Gaps = 29/176 (16%)
Query: 1 MQASRARLFKEYKEVQRE------KVADPDI-QLICDDTNIFKWTALIKGPSETPYEGGV 53
M ++ RL KEY+ V++E + D I L + +F+W+A+I+GP ++P+E +
Sbjct: 1 MSSTEKRLLKEYRAVKKELTEKRSPIHDTGIVDLHPLEDGLFRWSAVIRGPDQSPFEDAL 60
Query: 54 FQLAFSVPEPYPLQPPQVRFLT----------------------KIFHPNVHFKTGEICL 91
++L +P YPL PP+++F+ K+ HPNV+FKTGEICL
Sbjct: 61 WKLEIDIPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICL 120
Query: 92 DILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMY 147
DIL+ WSPAWTLQS AI+ L+A+PEP SPLN D NLL+ D + + Y
Sbjct: 121 DILQQKWSPAWTLQSALVAIVVLLANPEPLSPLNIDMANLLKCDDTTAYKDLVHYY 176
>ref|XP_674871.1| ubiquitin-conjugating enzyme [Plasmodium berghei strain ANKA]
emb|CAH99505.1| ubiquitin-conjugating enzyme, putative [Plasmodium berghei]
Length = 202
Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
RL KE K+++ E V + D + D+N F+W IKGP TPYEGG F LA ++P YP
Sbjct: 13 RLQKELKDIENENVQEIDAHI--KDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPY 70
Query: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+++F+TKI+HPN+ +TG ICLD+LKN WSPA T+++ +I AL++ P+PD P +
Sbjct: 71 NPPKIKFVTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDA 130
Query: 127 DSGNLLRSGDVRGFNSMAQMYTR-LAAMPKK 156
+ + + F A ++T+ A PK+
Sbjct: 131 EVAKMYKENHAL-FVKTASVWTKTFATAPKE 160
>ref|XP_001610991.1| ubiquitin-conjugating enzyme, putative [Babesia bovis T2Bo]
gb|EDO07423.1| ubiquitin-conjugating enzyme, putative [Babesia bovis]
Length = 197
Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/148 (43%), Positives = 92/148 (62%), Gaps = 3/148 (2%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
M RL +E ++Q+E D + + NIFKW IKGP +TPYEGG+F L +
Sbjct: 1 MYRQNLRLERELNDIQKELDGPVDAHTV--ENNIFKWKGYIKGPIQTPYEGGLFILNIDI 58
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
P+ YP PP++RF TKI+HPN+ +TG ICLDILKN WSPA TL++ +I ALM+ PEP
Sbjct: 59 PDDYPYNPPKIRFETKIWHPNISSETGAICLDILKNEWSPALTLRTALLSIQALMSTPEP 118
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYT 148
D P + + + + + F A+++T
Sbjct: 119 DDPQDAEVATMYQR-NYDEFERTAKLWT 145
>ref|XP_729393.1| ubiquitin conjugating enzyme [Plasmodium yoelii yoelii str. 17XNL]
gb|EAA20958.1| ubiquitin conjugating enzyme [Plasmodium yoelii yoelii]
Length = 202
Score = 134 bits (336), Expect = 3e-30, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 96/151 (63%), Gaps = 4/151 (2%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
RL KE K+++ E V + D + D+N F+W IKGP TPYEGG F LA ++P YP
Sbjct: 13 RLQKELKDIENENVQEIDAHI--KDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPY 70
Query: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+++F+TKI+HPN+ +TG ICLD+LKN WSPA T+++ +I AL++ P+PD P +
Sbjct: 71 NPPKIKFVTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDA 130
Query: 127 DSGNLLRSGDVRGFNSMAQMYTR-LAAMPKK 156
+ + + F A ++T+ A PK+
Sbjct: 131 EVAKMYKENHAL-FVKTASVWTKTFATGPKE 160
>ref|XP_001350274.1| ubiquitin-conjugating enzyme [Plasmodium falciparum 3D7]
emb|CAD52683.1| ubiquitin-conjugating enzyme, putative [Plasmodium falciparum 3D7]
Length = 202
Score = 133 bits (335), Expect = 3e-30, Method: Composition-based stats.
Identities = 63/149 (42%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
RL KE K++++E V + D + DTNIF+W IKGPS TPYEGG F L ++P YP
Sbjct: 13 RLQKELKDIEKENVDEIDAHM--KDTNIFEWVGFIKGPSGTPYEGGHFILDITIPNDYPY 70
Query: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+++F TKI+HPN+ +TG ICLD+LKN WSPA T+++ +I AL++ P+PD P +
Sbjct: 71 NPPKIKFNTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDA 130
Query: 127 DSGNLLRSGDVRGFNSMAQMYTRLAAMPK 155
+ + + + + A +PK
Sbjct: 131 EVAKMYKENYSLYLKTASVWTKTFATVPK 159
>ref|XP_954044.1| ubiquitin conjugating enzyme, putative [Theileria annulata strain
Ankara]
emb|CAI73367.1| ubiquitin conjugating enzyme, putative [Theileria annulata]
Length = 197
Score = 130 bits (327), Expect = 3e-29, Method: Composition-based stats.
Identities = 63/142 (44%), Positives = 91/142 (64%), Gaps = 3/142 (2%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
RL +E K+++ E D ++ D NIFKW I GP TPYEGG F L S+PE YP
Sbjct: 10 RLKRELKDIENEN--DSTVEAYVVDDNIFKWKGHILGPPGTPYEGGHFTLDISIPEDYPY 67
Query: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP ++F TKI+HPN+ +TG ICLDILK+ WSPA T+++ +I AL++ PEPD P +
Sbjct: 68 SPPAIKFETKIWHPNISSETGAICLDILKSEWSPALTIRTALISIQALLSAPEPDDPQDA 127
Query: 127 DSGNLLRSGDVRGFNSMAQMYT 148
N+ + + + F + A+++T
Sbjct: 128 QVANMYKR-NYQEFENTAKLWT 148
>ref|XP_766253.1| ubiquitin conjugating enzyme [Theileria parva strain Muguga]
gb|EAN33970.1| ubiquitin conjugating enzyme, putative [Theileria parva]
Length = 177
Score = 129 bits (325), Expect = 4e-29, Method: Composition-based stats.
Identities = 63/142 (44%), Positives = 91/142 (64%), Gaps = 3/142 (2%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
RL +E K+++ E D ++ D NIFKW I GP TPYEGG F L S+PE YP
Sbjct: 8 RLKRELKDIENEN--DSTVEAYVVDNNIFKWKGHILGPPGTPYEGGHFTLDISIPEDYPY 65
Query: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP ++F TKI+HPN+ +TG ICLDILK+ WSPA T+++ +I AL++ PEPD P +
Sbjct: 66 SPPVIKFETKIWHPNISSETGAICLDILKSEWSPALTIRTALISIQALLSAPEPDDPQDA 125
Query: 127 DSGNLLRSGDVRGFNSMAQMYT 148
N+ + + + F + A+++T
Sbjct: 126 QVANMYKR-NYKEFENTAKLWT 146
>ref|XP_001382750.2| hypothetical protein PICST_40340 [Pichia stipitis CBS 6054]
gb|ABN64721.2| predicted protein [Pichia stipitis CBS 6054]
Length = 174
Score = 126 bits (316), Expect = 6e-28, Method: Composition-based stats.
Identities = 67/147 (45%), Positives = 96/147 (65%), Gaps = 9/147 (6%)
Query: 7 RLFKEYKEVQREKVADPDIQLI----CDDTNIFKWTALIKGPSETP---YEGGVFQLAFS 59
RLFKE + ++ + + Q++ D+ +IFKW A+I PS+ Y G ++L S
Sbjct: 5 RLFKELNQYRKNPPSSNNHQIVSLNPVDEDDIFKWEAVISKPSKKDSQFYYQGEWKLGIS 64
Query: 60 VPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILK-NAWSPAWTLQSVCRAIIALMAHP 118
VP YP+ PPQ++F++ I HPN++ TGEICLDILK ++WSPAW L+++ AI+ L+ +P
Sbjct: 65 VPSTYPITPPQMKFVSPICHPNINITTGEICLDILKSDSWSPAWNLENLLVAILMLLDNP 124
Query: 119 EPDSPLNCDSGNLLRSGDVRGFNSMAQ 145
EPDSPLN DS NL R D F S+ Q
Sbjct: 125 EPDSPLNLDSANLFRH-DKLAFESLVQ 150
>gb|EDU48836.1| ubiquitin-conjugating enzyme E2 4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 167
Score = 125 bits (315), Expect = 6e-28, Method: Composition-based stats.
Identities = 59/119 (49%), Positives = 79/119 (66%)
Query: 31 DTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEIC 90
+ ++ +W A++KG T YE G + L+ S+P YPL P +RF+T I HPNV FKTGEIC
Sbjct: 36 EDDVMQWRAVMKGVPGTAYEDGCWLLSISIPPTYPLAAPTIRFITPICHPNVDFKTGEIC 95
Query: 91 LDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTR 149
LD+LK +WSPA+TL + +I L+ EPDSPLN D L RSGD G S+ + YT+
Sbjct: 96 LDLLKTSWSPAYTLSTTMTSIHQLLTSAEPDSPLNVDIAQLFRSGDEVGAMSLIRFYTQ 154
>ref|XP_001537771.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gb|EDN10732.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 174
Score = 125 bits (314), Expect = 9e-28, Method: Composition-based stats.
Identities = 56/120 (46%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 30 DDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEI 89
+DT++ +W A++KG +TPYEGG++ L ++P YPL PP + F T+I HPNV F TGEI
Sbjct: 36 NDTDLLRWEAVLKGIKDTPYEGGLWHLTLTIPPTYPLHPPAIAFTTRICHPNVSFTTGEI 95
Query: 90 CLDILKNA-WSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYT 148
CL +L WSPA+TL + AI L+ P P+SPLN D L++SGD G+ + + +T
Sbjct: 96 CLTLLTTEHWSPAYTLSTTMSAIQQLLTDPRPESPLNVDVAVLMKSGDTVGWEGLVRYWT 155
>ref|XP_001616347.1| Ubiquitin-conjugating enzyme family protein [Plasmodium vivax
SaI-1]
gb|EDL46620.1| Ubiquitin-conjugating enzyme family protein [Plasmodium vivax]
Length = 202
Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats.
Identities = 63/150 (42%), Positives = 94/150 (62%), Gaps = 4/150 (2%)
Query: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
RL KE K+++ E V + D + D+NI +W IKGPS TPYE G F L ++P YP
Sbjct: 13 RLQKELKDIENENVQEIDAHV--KDSNISEWVGFIKGPSGTPYEDGHFILDITIPNDYPY 70
Query: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNC 126
PP+++F TKI+HPN+ +TG ICLD+LKN WSPA T+++ +I AL++ P+PD P +
Sbjct: 71 NPPKIKFNTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDA 130
Query: 127 DSGNLLRSGDVRGFNSMAQMYTR-LAAMPK 155
+ + + + F A ++T+ A PK
Sbjct: 131 EVAKMYKE-NYSLFLKTASVWTKTFATGPK 159
>ref|XP_001800618.1| hypothetical protein SNOG_10342 [Phaeosphaeria nodorum SN15]
gb|EAT82677.2| hypothetical protein SNOG_10342 [Phaeosphaeria nodorum SN15]
Length = 158
Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats.
Identities = 66/145 (45%), Positives = 85/145 (58%), Gaps = 7/145 (4%)
Query: 7 RLFKEYKEVQREKVADPD---IQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEP 63
RL E + Q +DP+ ++L D ++ W A++KG T YEGG + L +P
Sbjct: 13 RLMTELQTYQ----SDPNEALLELGPIDDDVMHWRAVMKGVVGTAYEGGRWLLDIHIPNA 68
Query: 64 YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSP 123
YPL PP +RF+T I HPNV FKTGEICLD LK AW+PA T+ + I L+ EPDSP
Sbjct: 69 YPLSPPSIRFVTPICHPNVDFKTGEICLDTLKTAWTPALTITATMTTIHQLLTSAEPDSP 128
Query: 124 LNCDSGNLLRSGDVRGFNSMAQMYT 148
LN D L R GD G S+ + YT
Sbjct: 129 LNVDVAQLFRIGDEIGAQSLIRFYT 153
>ref|XP_001265674.1| ubiquitin conjugating enzyme (UbcJ), putative [Neosartorya fischeri
NRRL 181]
gb|EAW23777.1| ubiquitin conjugating enzyme (UbcJ), putative [Neosartorya fischeri
NRRL 181]
Length = 164
Score = 124 bits (311), Expect = 2e-27, Method: Composition-based stats.
Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 9/151 (5%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLI----CDDTNIFKWTALIKGPSETPYEGGVFQLAF 58
++ RL +E K+ + P+ L+ D+ ++ W A++KG TPYEGG++ L
Sbjct: 5 STTQRLLRELKDYTKS----PNEALLHLGPVDEDDLLHWEAVLKGVKGTPYEGGLWGLKI 60
Query: 59 SVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNA-WSPAWTLQSVCRAIIALMAH 117
++P YPL PP +RF+T+I HPN+ F TGEICL +L WSP +TL + AI L+
Sbjct: 61 TIPPNYPLAPPNIRFMTRISHPNISFTTGEICLTLLTTEHWSPVYTLSTTLTAIHQLLTD 120
Query: 118 PEPDSPLNCDSGNLLRSGDVRGFNSMAQMYT 148
P PDSPLN D LLR GD+ + S+ + +T
Sbjct: 121 PRPDSPLNVDVAALLRDGDIPAWESIVRYWT 151
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
emb|CAO44055.1| unnamed protein product [Vitis vinifera] 277 2e-73
ref|NP_568476.1| PEX4 (PEROXIN4); ubiquitin-protein ligase ... 276 5e-73
gb|ABK94752.1| unknown [Populus trichocarpa] 275 8e-73
ref|NP_001047515.1| Os02g0634800 [Oryza sativa (japonica cu... 274 1e-72
gb|ACA24139.1| ubiquitin-conjugating enzyme [Lolium temulen... 268 9e-71
pdb|2OXQ|A Chain A, Structure Of The Ubch5 :chip U-Box Comp... 265 8e-70
gb|ABK23891.1| unknown [Picea sitchensis] 263 4e-69
ref|NP_955958.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5... 262 6e-69
ref|NP_001072891.1| ubiquitin-conjugating enzyme E2D 1 (UBC... 259 3e-68
gb|EAZ12964.1| hypothetical protein OsJ_002789 [Oryza sativ... 259 4e-68
ref|NP_957404.1| hypothetical protein LOC394085 [Danio reri... 259 5e-68
ref|NP_567791.1| UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubi... 259 5e-68
gb|AAG40371.1|AF325019_1 AT4g27960 [Arabidopsis thaliana] 259 5e-68
ref|XP_001120139.1| PREDICTED: similar to Ubiquitin-conjuga... 258 7e-68
ref|XP_001080152.1| PREDICTED: similar to ubiquitin-conjuga... 258 1e-67
pdb|1Z2U|A Chain A, The 1.1a Crystallographic Structure Of ... 258 1e-67
pdb|2ESK|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2)... 257 1e-67
ref|NP_057067.1| ubiquitin-conjugating enzyme E2D 4 (putati... 257 1e-67
gb|EAZ08485.1| hypothetical protein OsI_029717 [Oryza sativ... 257 1e-67
ref|XP_001699308.1| ubiquitin conjugating enzyme [Chlamydom... 257 2e-67
ref|NP_731941.1| effete CG7425-PA [Drosophila melanogaster]... 257 2e-67
ref|XP_001773168.1| predicted protein [Physcomitrella paten... 257 2e-67
pdb|2C4O|B Chain B, Crystal Structure Of Human Ubiquitin-Co... 257 2e-67
ref|NP_502065.1| LEThal family member (let-70) [Caenorhabdi... 257 2e-67
ref|NP_001082922.1| hypothetical protein LOC100001914 [Dani... 256 3e-67
emb|CAJ57642.1| putative ubiquitin conjugating enzyme 2 [Oe... 256 5e-67
ref|NP_003330.1| ubiquitin-conjugating enzyme E2D 2 isoform... 256 5e-67
pdb|2ESQ|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2)... 255 6e-67
ref|XP_001893776.1| ubiquitin-conjugating enzyme E2-17 kDa ... 255 7e-67
ref|NP_957253.1| ubiquitin-conjugating enzyme E2D 3 [Danio ... 255 8e-67
ref|XP_001764055.1| predicted protein [Physcomitrella paten... 255 9e-67
ref|XP_001495725.1| PREDICTED: similar to ubiquitin-conjuga... 255 9e-67
pdb|2C4P|A Chain A, Crystal Structure Of Human Ubiquitin-Co... 255 9e-67
gb|EAY75244.1| hypothetical protein OsI_003091 [Oryza sativ... 254 1e-66
ref|NP_001093355.1| hypothetical protein LOC100101299 [Xeno... 254 1e-66
ref|XP_001475660.1| PREDICTED: similar to ubiquitin-conjuga... 254 1e-66
pdb|2ESP|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2)... 254 1e-66
ref|NP_564828.1| UBC28; ubiquitin-protein ligase [Arabidops... 254 1e-66
pdb|2ESO|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2)... 254 1e-66
gb|AAC41750.1| ubiquitin conjugating enzyme >gi|1096569|prf... 254 1e-66
gb|EAZ01104.1| hypothetical protein OsI_022336 [Oryza sativ... 254 1e-66
ref|NP_001054191.1| Os04g0667800 [Oryza sativa (japonica cu... 254 2e-66
ref|XP_001758801.1| predicted protein [Physcomitrella paten... 254 2e-66
ref|XP_001764546.1| predicted protein [Physcomitrella paten... 254 2e-66
ref|NP_566331.1| UBC11 (ubiquitin-conjugating enzyme 11); u... 254 2e-66
gb|AAP36440.1| Homo sapiens ubiquitin-conjugating enzyme E2... 254 2e-66
ref|NP_003329.1| ubiquitin-conjugating enzyme E2D 1 [Homo s... 253 2e-66
emb|CAJ57641.1| putative ubiquitin conjugating enzyme 2 [Oe... 253 2e-66
emb|CAN77946.1| hypothetical protein [Vitis vinifera] >gi|1... 253 2e-66
ref|NP_955865.1| ubiquitin-conjugating enzyme E2D 2 [Danio ... 253 3e-66
gb|ACO13579.1| Ubiquitin-conjugating enzyme E2 D2 [Esox luc... 253 3e-66
gb|ABK95528.1| unknown [Populus trichocarpa] 253 3e-66
emb|CAN77754.1| hypothetical protein [Vitis vinifera] >gi|1... 253 3e-66
gb|ABK95908.1| unknown [Populus trichocarpa] 253 3e-66
gb|ABK94824.1| unknown [Populus trichocarpa] >gi|157358204|... 253 3e-66
ref|NP_849462.1| UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubi... 253 3e-66
ref|NP_871621.1| ubiquitin-conjugating enzyme E2D 3 isoform... 253 3e-66
gb|ABK94185.1| unknown [Populus trichocarpa] >gi|118484898|... 253 3e-66
gb|AAL99224.1| ubiquitin-conjugating enzyme E2 [Gossypium t... 253 3e-66
gb|ABK94176.1| unknown [Populus trichocarpa] >gi|118486683|... 253 3e-66
gb|EAY85278.1| hypothetical protein OsI_006511 [Oryza sativ... 252 4e-66
gb|ACB87921.1| ubiquitin conjugating enzyme 3 [Malus x dome... 252 4e-66
gb|ABQ65169.1| ubiquitin conjugating enzyme E2 [Adiantum ca... 252 4e-66
gb|ACC38297.1| E2 ubiquitin-conjugating enzyme UBC10 [Brass... 252 4e-66
gb|AAD51109.1|AF176040_1 ubiquitin-conjugating enzyme UBC2 ... 252 4e-66
sp|P35135|UBC4_LYCES Ubiquitin-conjugating enzyme E2-17 kDa... 252 4e-66
ref|NP_956246.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5... 252 4e-66
gb|EAY76292.1| hypothetical protein OsI_004139 [Oryza sativ... 252 4e-66
ref|NP_001043763.1| Os01g0658400 [Oryza sativa (japonica cu... 252 5e-66
ref|NP_568788.1| UBC10 (UBIQUITIN-CONJUGATING ENZYME 10); u... 252 5e-66
ref|NP_001072141.1| UB2D2 [Sus scrofa] >gi|121957312|sp|Q06... 252 5e-66
gb|ABK93202.1| unknown [Populus trichocarpa] 252 6e-66
gb|AAL99222.1| ubiquitin-conjugating enzyme E2 [Gossypium h... 252 6e-66
gb|ABI84263.1| ubiquitin carrier-like protein [Arachis hypo... 252 6e-66
ref|XP_001376552.1| PREDICTED: similar to Chain B, Crystal ... 252 7e-66
gb|AAI55783.1| Unknown (protein for MGC:174834) [Danio rerio] 252 7e-66
gb|AAU82109.1| ubiquitin-conjugating enzyme [Triticum aesti... 252 7e-66
pdb|1X23|A Chain A, Crystal Structure Of Ubch5c >gi|6636040... 252 8e-66
ref|XP_757129.1| ubiquitin-conjugating enzyme E2-16 kDa [Us... 251 8e-66
ref|NP_003331.1| ubiquitin-conjugating enzyme E2D 3 isoform... 251 8e-66
emb|CAI29540.1| ubiquitin conjugating enzyme E2 [Oryza sati... 251 8e-66
gb|AAL99223.1| ubiquitin-conjugating enzyme E2 [Gossypium a... 251 9e-66
gb|ACO35043.1| ubiquitin-conjugating enzyme E2 D4 [Larimich... 251 9e-66
ref|XP_001785852.1| predicted protein [Physcomitrella paten... 251 1e-65
gb|AAR83891.1| ubiquitin-conjugating enzyme 8 [Capsicum ann... 251 1e-65
gb|EDK98464.1| mCG1038069 [Mus musculus] 251 1e-65
ref|NP_851114.1| UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubi... 251 1e-65
gb|AAM63450.1| E2, ubiquitin-conjugating enzyme 10 (UBC10) ... 251 1e-65
gb|AAA64427.1| ubiquitin conjugating enzyme 251 1e-65
emb|CAJ57640.1| putative ubiquitin conjugating enzyme 2 [Oe... 251 1e-65
emb|CAA51821.1| ubiquitin conjugating enzyme E2 [Solanum ly... 251 1e-65
ref|XP_001367781.1| PREDICTED: similar to ubiquitin conjuga... 251 1e-65
ref|XP_001635732.1| predicted protein [Nematostella vectens... 251 1e-65
ref|NP_001104888.1| ubiquitin conjugating enzyme [Zea mays]... 251 1e-65
pdb|2AYV|A Chain A, Crystal Structure Of A Putative Ubiquit... 251 1e-65
ref|NP_871622.1| ubiquitin-conjugating enzyme E2D 3 isoform... 251 1e-65
gb|AAF24583.1|AC007764_25 F22C12.2 [Arabidopsis thaliana] 251 1e-65
pdb|2C4O|A Chain A, Crystal Structure Of Human Ubiquitin-Co... 251 1e-65
ref|NP_001045711.1| Os02g0120600 [Oryza sativa (japonica cu... 251 2e-65
pdb|2FUH|A Chain A, Solution Structure Of The Ubch5cUB NON-... 251 2e-65
gb|ACB87920.1| ubiquitin conjugating enzyme 2 [Malus x dome... 251 2e-65
gb|AAH66917.1| Ubiquitin-conjugating enzyme E2D 3 (UBC4/5 h... 250 2e-65
ref|XP_001793346.1| hypothetical protein SNOG_02749 [Phaeos... 250 2e-65
gb|AAY29571.1| immature spike ubiquitin-conjugating enzyme ... 250 2e-65
gb|EDU41418.1| ubiquitin-conjugating enzyme E2-16 kDa [Pyre... 250 2e-65
gb|ABK24465.1| unknown [Picea sitchensis] 250 2e-65
emb|CAG01241.1| unnamed protein product [Tetraodon nigrovir... 250 2e-65
ref|XP_001729512.1| hypothetical protein MGL_3547 [Malassez... 250 2e-65
gb|ABK93164.1| unknown [Populus trichocarpa] 250 2e-65
gb|ABK21411.1| unknown [Picea sitchensis] >gi|116782144|gb|... 250 2e-65
dbj|BAB93371.1| ubiquitin conjugating enzyme [Oryza sativa ... 250 2e-65
dbj|BAD08135.1| ubiquitin-conjugating enzyme [Oryza sativa ... 250 2e-65
gb|AAM62889.1| E2, ubiquitin-conjugating enzyme UBC8 [Arabi... 250 2e-65
gb|ABK21244.1| unknown [Picea sitchensis] >gi|116790480|gb|... 250 2e-65
dbj|BAB22614.1| unnamed protein product [Mus musculus] 250 3e-65
gb|AAL85988.1| putative E2, ubiquitin-conjugating enzyme UB... 250 3e-65
gb|AAN03469.1| ubiquitin-conjugation enzyme [Glycine max] 250 3e-65
gb|ABA81863.1| ubiquitin-conjugating enzyme 8-like [Solanum... 249 3e-65
gb|ABR25804.1| ubiquitin-conjugating enzyme e2-17 kDa [Oryz... 249 3e-65
gb|AAV34697.1| ubiquitin-conjugating enzyme [Arachis hypogaea] 249 3e-65
dbj|BAB24239.1| unnamed protein product [Mus musculus] 249 3e-65
gb|ABI98679.1| ubiquitin-conjugating enzyme H5b [Litopenaeu... 249 3e-65
emb|CAG33197.1| UBE2D3 [Homo sapiens] 249 4e-65
gb|AAD00911.1| putative ubiquitin conjugating enzyme [Pinus... 249 5e-65
ref|XP_001135656.1| PREDICTED: similar to ubiquitin-conjuga... 249 5e-65
ref|XP_001743467.1| predicted protein [Monosiga brevicollis... 249 5e-65
dbj|BAE31970.1| unnamed protein product [Mus musculus] >gi|... 249 5e-65
ref|XP_755003.1| ubiquitin conjugating enzyme (UbcD) [Asper... 249 6e-65
gb|AAP36228.1| Homo sapiens ubiquitin-conjugating enzyme E2... 249 6e-65
ref|XP_370047.2| ubiquitin conjugating enzyme UBC1 [Magnapo... 249 6e-65
ref|XP_001697709.1| hypothetical protein CHLREDRAFT_131472 ... 249 6e-65
sp|Q4R4I1|UBE2N_MACFA Ubiquitin-conjugating enzyme E2 N (Ub... 249 6e-65
ref|NP_001046486.1| Os02g0261100 [Oryza sativa (japonica cu... 249 6e-65
ref|NP_001117973.1| ubiquitin-conjugating enzyme E2D 2 isof... 249 6e-65
ref|NP_446380.1| ubiquitin-conjugating enzyme E2N [Rattus n... 249 7e-65
ref|NP_003339.1| ubiquitin-conjugating enzyme E2N [Homo sap... 249 7e-65
ref|XP_517826.2| PREDICTED: similar to ubiquitin conjugatin... 248 7e-65
ref|NP_568595.2| UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubi... 248 8e-65
ref|XP_001429543.1| hypothetical protein GSPATT00032377001 ... 248 8e-65
ref|XP_001824449.1| hypothetical protein [Aspergillus oryza... 248 8e-65
ref|XP_001246730.1| ubiquitin-conjugating enzyme E2 [Coccid... 248 8e-65
ref|XP_001587931.1| ubiquitin-conjugating enzyme E2 [Sclero... 248 8e-65
emb|CAH58635.1| Ubiquitin-conjugating enzyme [Plantago major] 248 8e-65
ref|XP_001502490.1| PREDICTED: similar to Chain B, Crystal ... 248 8e-65
ref|NP_595283.1| ubiquitin conjugating enzyme Ubc4 [Schizos... 248 9e-65
emb|CAN73628.1| hypothetical protein [Vitis vinifera] >gi|1... 248 1e-64
gb|AAL99219.1| ubiquitin-conjugating enzyme E2 [Gossypium h... 248 1e-64
ref|NP_568835.1| UBC30 (UBIQUITIN-CONJUGATING ENZYME 30); u... 248 1e-64
ref|XP_001270622.1| ubiquitin conjugating enzyme (UbcD), pu... 248 1e-64
dbj|BAE72681.1| hypothetical protein [Epichloe festucae] 247 1e-64
ref|NP_001012828.1| ubiquitin-conjugating enzyme E2N [Gallu... 247 1e-64
ref|NP_565391.1| UBC29 (UBIQUITIN-CONJUGATING ENZYME 29); u... 247 1e-64
gb|EEH52091.1| predicted protein [Micromonas pusilla CCMP1545] 247 1e-64
ref|XP_001881094.1| predicted protein [Laccaria bicolor S23... 247 2e-64
ref|NP_001068603.1| ubiquitin-conjugating enzyme E2D 3 [Bos... 247 2e-64
ref|XP_001217453.1| ubiquitin-conjugating enzyme E2 4 [Aspe... 247 2e-64
ref|XP_454516.1| unnamed protein product [Kluyveromyces lac... 247 2e-64
ref|XP_001497930.1| PREDICTED: similar to ubiquitin conjuga... 247 2e-64
ref|NP_010344.1| Ubiquitin-conjugating enzyme that mediates... 247 2e-64
ref|XP_001546715.1| ubiquitin-conjugating enzyme E2-16 kDa ... 247 2e-64
ref|NP_112263.1| ubiquitin-conjugating enzyme [Rattus norve... 247 2e-64
ref|XP_461820.1| hypothetical protein DEHA0G06941g [Debaryo... 247 2e-64
ref|XP_001376653.1| PREDICTED: similar to ubiquitin-conjuga... 247 2e-64
ref|XP_001644513.1| hypothetical protein Kpol_1052p2 [Vande... 247 2e-64
ref|XP_001358220.1| GA20341-PA [Drosophila pseudoobscura] >... 246 3e-64
ref|XP_502855.1| hypothetical protein [Yarrowia lipolytica]... 246 3e-64
ref|NP_998651.1| ubiquitin-conjugating enzyme E2N [Danio re... 246 3e-64
ref|NP_956636.1| ubiquitin-conjugating enzyme E2N-like [Dan... 246 3e-64
ref|XP_414470.2| PREDICTED: similar to Chain A, Nmr Based S... 246 3e-64
ref|XP_001516057.1| PREDICTED: similar to ubiquitin-conjuga... 246 3e-64
ref|XP_959933.2| hypothetical protein NCU02289 [Neurospora ... 246 3e-64
ref|NP_989375.1| ubiquitin-conjugating enzyme E2N (UBC13 ho... 246 4e-64
gb|ABQ12946.1| ubiquitin-conjugating enzyme E2N-like [Bos t... 246 4e-64
ref|XP_445894.1| unnamed protein product [Candida glabrata]... 246 4e-64
pdb|2C2V|B Chain B, Crystal Structure Of The Chip-Ubc13-Uev... 246 4e-64
sp|O74196|UBC1_COLGL Ubiquitin-conjugating enzyme E2-16 kDa... 246 4e-64
emb|CAO21299.1| unnamed protein product [Vitis vinifera] 246 4e-64
ref|XP_001904775.1| unnamed protein product [Podospora anse... 246 4e-64
ref|XP_001544213.1| ubiquitin-conjugating enzyme E2-16 kDa ... 246 5e-64
ref|NP_985031.1| AER173Cp [Ashbya gossypii ATCC 10895] >gi|... 246 5e-64
ref|XP_969360.1| PREDICTED: similar to CG18319-PA [Triboliu... 246 6e-64
ref|XP_534272.1| PREDICTED: similar to ubiquitin-conjugatin... 245 6e-64
ref|XP_534224.2| PREDICTED: similar to ubiquitin-conjugatin... 245 7e-64
gb|ACO66863.1| predicted protein [Micromonas sp. RCC299] 245 7e-64
gb|AAP80691.1| ubiquitin-conjugating enzyme [Griffithsia ja... 245 7e-64
ref|NP_009638.1| Ubiquitin-conjugating enzyme (E2), mediate... 245 7e-64
ref|XP_392901.2| PREDICTED: similar to bendless CG18319-PA ... 245 7e-64
ref|XP_001227534.1| ubiquitin-conjugating enzyme E2 [Chaeto... 245 1e-63
ref|XP_660365.1| UBC1_COLGL Ubiquitin-conjugating enzyme E2... 244 1e-63
ref|NP_001062791.1| Os09g0293400 [Oryza sativa (japonica cu... 244 1e-63
ref|XP_001388020.1| hypothetical protein PICST_80064 [Pichi... 244 1e-63
gb|AAP04430.1| ubiquitin-conjugating enzyme [Hordeum vulgare] 244 1e-63
ref|XP_001606785.1| PREDICTED: similar to ubiquitin conjuga... 244 1e-63
dbj|BAB26188.1| unnamed protein product [Mus musculus] 244 1e-63
ref|XP_001422486.1| predicted protein [Ostreococcus lucimar... 244 2e-63
ref|XP_001445732.1| hypothetical protein GSPATT00013765001 ... 244 2e-63
ref|NP_001040393.1| ubiquitin conjugating enzyme E2 [Bombyx... 244 2e-63
gb|AAD55983.1|AF161722_1 ubiquitin-conjugating protein [Mag... 243 2e-63
ref|XP_001568232.1| ubiquitin-conjugating enzyme E2, putati... 243 2e-63
ref|XP_001649243.1| ubiquitin conjugating enzyme, putative ... 243 3e-63
gb|AAI58913.1| Unknown (protein for IMAGE:7528895) [Xenopus... 243 3e-63
ref|XP_001368675.1| PREDICTED: similar to Ubiquitin-conjuga... 243 3e-63
ref|XP_001485150.1| ubiquitin-conjugating enzyme E2 4 [Pich... 243 4e-63
ref|XP_001848064.1| ubiquitin-conjugating enzyme E2-17 kDa ... 243 4e-63
ref|XP_844774.1| ubiquitin-conjugating enzyme E2, putative ... 242 4e-63
ref|XP_843237.1| ubiquitin-conjugating enzyme E2, putative ... 242 4e-63
gb|ACO15432.1| Ubiquitin-conjugating enzyme E2 N [Caligus c... 242 4e-63
ref|XP_791462.1| PREDICTED: similar to ubiquitin-conjugatin... 242 4e-63
ref|XP_781361.1| PREDICTED: hypothetical protein [Strongylo... 242 6e-63
ref|XP_652691.1| ubiquitin-conjugating enzyme family protei... 242 6e-63
ref|XP_571364.1| ubiquitin-conjugating enzyme e2-16 kda [Cr... 242 7e-63
ref|XP_314098.2| AGAP005197-PA [Anopheles gambiae str. PEST... 242 7e-63
ref|XP_001736851.1| ubiquitin-conjugating enzyme E2 D4, put... 242 7e-63
ref|NP_511150.1| bendless CG18319-PA [Drosophila melanogast... 242 8e-63
gb|ABR26629.1| ubiquitin conjugating enzyme [Lolium perenne] 242 8e-63
ref|NP_001080830.1| ubiquitin-conjugating enzyme E2N [Xenop... 241 1e-62
ref|XP_635643.1| hypothetical protein DDBDRAFT_0188947 [Dic... 241 1e-62
ref|XP_001105664.1| PREDICTED: similar to ubiquitin-conjuga... 241 1e-62
ref|XP_812602.1| ubiquitin-conjugating enzyme E2, putative ... 241 2e-62
gb|AAW24799.1| SJCHGC00720 protein [Schistosoma japonicum] 240 2e-62
gb|ACO14311.1| Ubiquitin-conjugating enzyme E2 N [Esox lucius] 240 2e-62
ref|XP_001623427.1| predicted protein [Nematostella vectens... 240 2e-62
ref|XP_001510479.1| PREDICTED: similar to Chain B, Crystal ... 240 3e-62
ref|XP_001712182.1| ubc4 [Hemiselmis andersenii] >gi|160331... 240 3e-62
sp|P43102|UBC4_CANAL Ubiquitin-conjugating enzyme E2 4 (Ubi... 239 4e-62
ref|XP_621074.1| PREDICTED: similar to ubiquitin-conjugatin... 239 5e-62
ref|XP_001897862.1| ubiquitin conjugating enzyme protein 13... 239 5e-62
gb|ABB55888.1| ubiquitin conjugating enzyme [Proteomonas su... 239 5e-62
ref|NP_566332.1| UBC12 (ubiquitin-conjugating enzyme 12); u... 238 8e-62
ref|XP_001713335.1| ubiquitin conjugating enzyme [Guillardi... 238 9e-62
ref|XP_001024315.1| Ubiquitin-conjugating enzyme family pro... 238 9e-62
emb|CAM20851.1| novel protein similar to ubiquitin-conjugat... 238 1e-61
ref|XP_509265.2| PREDICTED: similar to ubiquitin-conjugatin... 237 1e-61
gb|ABB55885.1| ubiquitin conjugating enzyme [Hanusia phi] 237 2e-61
ref|XP_001363605.1| PREDICTED: similar to ubiquitin-conjuga... 237 2e-61
gb|AAL67839.1| putative ubiquitin [Pinus pinaster] 237 2e-61
ref|XP_775030.1| hypothetical protein CNBF1930 [Cryptococcu... 236 3e-61
ref|XP_001495424.1| PREDICTED: similar to ubiquitin-conjuga... 236 3e-61
ref|XP_890535.1| PREDICTED: similar to ubiquitin-conjugatin... 236 4e-61
ref|XP_001745365.1| predicted protein [Monosiga brevicollis... 236 4e-61
gb|AAH48523.1| Predicted gene, EG237009 [Mus musculus] 236 4e-61
ref|XP_001778399.1| predicted protein [Physcomitrella paten... 236 4e-61
ref|XP_001250125.1| PREDICTED: similar to ubiquitin conjuga... 236 5e-61
ref|XP_001897800.1| Ubiquitin conjugating enzyme protein 13... 236 5e-61
ref|XP_851403.1| PREDICTED: similar to ubiquitin-conjugatin... 236 5e-61
ref|XP_001019555.1| Ubiquitin-conjugating enzyme family pro... 236 6e-61
ref|XP_001094543.1| PREDICTED: similar to ubiquitin-conjuga... 235 6e-61
ref|XP_854681.1| PREDICTED: similar to ubiquitin-conjugatin... 235 6e-61
gb|ABK93888.1| unknown [Populus trichocarpa] >gi|118487650|... 235 8e-61
ref|XP_001518541.1| PREDICTED: similar to Chain B, Crystal ... 235 9e-61
ref|XP_001250193.1| PREDICTED: similar to ubiquitin conjuga... 235 9e-61
ref|NP_609715.1| CG3473 CG3473-PA [Drosophila melanogaster]... 235 9e-61
emb|CAG03424.1| unnamed protein product [Tetraodon nigrovir... 235 9e-61
ref|XP_001616514.1| ubiquitin-conjugating enzyme E2 4, puta... 235 1e-60
ref|XP_536365.1| PREDICTED: similar to ubiquitin-conjugatin... 234 1e-60
ref|XP_001550431.1| conserved hypothetical protein [Botryot... 234 1e-60
ref|XP_001764104.1| predicted protein [Physcomitrella paten... 234 1e-60
gb|AAN31476.1| ubiquitin-conjugating enzyme [Phytophthora i... 234 1e-60
ref|XP_001176445.1| PREDICTED: similar to Ubiquitin-conjuga... 234 2e-60
gb|EAZ32338.1| hypothetical protein OsJ_015821 [Oryza sativ... 234 2e-60
gb|ABK22122.1| unknown [Picea sitchensis] 234 2e-60
gb|ABK24341.1| unknown [Picea sitchensis] >gi|116791120|gb|... 233 4e-60
emb|CAO39390.1| unnamed protein product [Vitis vinifera] 232 4e-60
gb|AAZ20286.1| ubiquitin-conjugating enzyme 1 [Arachis hypo... 232 4e-60
gb|ABK93279.1| unknown [Populus trichocarpa] >gi|118483536|... 232 4e-60
gb|EEH58578.1| predicted protein [Micromonas pusilla CCMP1545] 232 5e-60
gb|AAD42941.1|AF091621_1 ubiquitin-conjugating enzyme E2 [C... 232 5e-60
ref|NP_564011.1| UBC13B/UBC36 (UBIQUITIN-CONJUGATING ENZYME... 232 6e-60
ref|XP_001798158.1| hypothetical protein SNOG_07831 [Phaeos... 232 6e-60
ref|XP_853730.1| PREDICTED: similar to ubiquitin-conjugatin... 232 6e-60
ref|XP_001257428.1| ubiquitin conjugating enzyme (UbcM), pu... 232 7e-60
ref|XP_642773.2| putative ubiquitin-conjugating enzyme E2 [... 231 9e-60
ref|NP_565192.1| UBC13A/UBC35 (UBIQUITIN-CONJUGATING ENZYME... 231 1e-59
ref|XP_001524698.1| ubiquitin-conjugating enzyme E2 13 [Lod... 231 1e-59
gb|EDU48517.1| ubiquitin-conjugating enzyme E2 N [Pyrenopho... 231 1e-59
ref|XP_390981.1| UBC1_COLGL Ubiquitin-conjugating enzyme E2... 231 1e-59
emb|CAG12069.1| unnamed protein product [Tetraodon nigrovir... 231 1e-59
ref|XP_001907470.1| unnamed protein product [Podospora anse... 231 1e-59
ref|NP_001069007.1| ubiquitin-conjugating enzyme E2D 4 (put... 231 1e-59
ref|XP_501290.1| hypothetical protein [Yarrowia lipolytica]... 231 1e-59
ref|NP_001043834.1| Os01g0673600 [Oryza sativa (japonica cu... 231 2e-59
ref|XP_747835.1| ubiquitin conjugating enzyme (UbcM) [Asper... 231 2e-59
ref|XP_001395006.1| hypothetical protein An11g10490 [Asperg... 230 2e-59
ref|XP_001182414.1| PREDICTED: similar to ubiquitin-conjuga... 230 2e-59
ref|XP_795646.1| PREDICTED: similar to bendless protein [St... 230 3e-59
ref|XP_001690010.1| predicted protein [Chlamydomonas reinha... 230 3e-59
ref|XP_001316746.1| ubiquitin conjugating enzyme, putative ... 230 3e-59
ref|XP_001823886.1| hypothetical protein [Aspergillus oryza... 229 3e-59
gb|ABI84266.1| ubiquitin-conjugating enzyme 1 like protein ... 229 4e-59
ref|XP_964107.1| ubiquitin-conjugating enzyme E2 13 [Neuros... 229 4e-59
Sequences not found previously or not previously below threshold:
gb|AAN31466.1| ubiquitin-conjugating enzyme [Phytophthora i... 240 2e-62
ref|XP_625662.1| ubiquitin-conjugating enzyme [Cryptosporid... 238 7e-62
ref|XP_001249441.1| PREDICTED: similar to Ubiquitin-conjuga... 236 5e-61
ref|XP_763468.1| ubiquitin-conjugating enzyme [Theileria pa... 234 1e-60
ref|XP_001249764.1| PREDICTED: similar to Ubiquitin-conjuga... 234 1e-60
ref|XP_001725225.1| PREDICTED: similar to Putative ubiquiti... 234 1e-60
ref|XP_745172.1| ubiquitin-conjugating enzyme e2 [Plasmodiu... 234 2e-60
ref|XP_001609369.1| ubiquitin-conjugating enzyme E2 [Babesi... 234 2e-60
emb|CAF89770.1| unnamed protein product [Tetraodon nigrovir... 231 1e-59
ref|XP_001255997.1| PREDICTED: similar to Ubiquitin-conjuga... 229 4e-59
>emb|CAO44055.1| unnamed protein product [Vitis vinifera]
Length = 157
Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats.
Identities = 147/157 (93%), Positives = 154/157 (98%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
MQASRARLFKEYKEVQREK ADPDIQL+CDD+NIFKWTALIKGPSETP+EGGVFQLAF+V
Sbjct: 1 MQASRARLFKEYKEVQREKAADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFAV 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61 PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCDSGNLLRSGD+RG+ SMA+MYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDIRGYQSMARMYTRLAAMPKKG 157
>ref|NP_568476.1| PEX4 (PEROXIN4); ubiquitin-protein ligase [Arabidopsis thaliana]
ref|NP_001031939.1| PEX4 (PEROXIN4); ubiquitin-protein ligase [Arabidopsis thaliana]
gb|AAM60888.1| E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana]
gb|AAY44861.1| ubiquitinating enzyme [Arabidopsis thaliana]
gb|ABF59034.1| At5g25760 [Arabidopsis thaliana]
Length = 157
Score = 276 bits (706), Expect = 5e-73, Method: Composition-based stats.
Identities = 157/157 (100%), Positives = 157/157 (100%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV
Sbjct: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
>gb|ABK94752.1| unknown [Populus trichocarpa]
Length = 157
Score = 275 bits (704), Expect = 8e-73, Method: Composition-based stats.
Identities = 148/157 (94%), Positives = 152/157 (96%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
MQASRARLFKEYKEVQREKVADPDIQ+ CDDTNIFKWTALIKGPSETP+EGGVFQL FSV
Sbjct: 1 MQASRARLFKEYKEVQREKVADPDIQIACDDTNIFKWTALIKGPSETPFEGGVFQLVFSV 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61 PEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCDSGNLLRSGDVRG+ SMA+MYTRLAA PKKG
Sbjct: 121 DSPLNCDSGNLLRSGDVRGYQSMARMYTRLAASPKKG 157
>ref|NP_001047515.1| Os02g0634800 [Oryza sativa (japonica cultivar-group)]
dbj|BAD25096.1| putative ubiquitin-conjugating enzyme E2 [Oryza sativa Japonica
Group]
dbj|BAD25314.1| putative ubiquitin-conjugating enzyme E2 [Oryza sativa Japonica
Group]
dbj|BAF09429.1| Os02g0634800 [Oryza sativa (japonica cultivar-group)]
Length = 157
Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats.
Identities = 147/157 (93%), Positives = 153/157 (97%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
MQASRARLFKEYKEVQREK ADPDIQLICDD+NIFKWTALIKGPSETP+EGGVFQLAFS+
Sbjct: 1 MQASRARLFKEYKEVQREKSADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFSI 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YPL PPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 61 PEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCDSGNLLRSGD+RG+ SMA+MYTRLAAMPKKG
Sbjct: 121 DSPLNCDSGNLLRSGDIRGYQSMARMYTRLAAMPKKG 157
>gb|ACA24139.1| ubiquitin-conjugating enzyme [Lolium temulentum]
Length = 155
Score = 268 bits (686), Expect = 9e-71, Method: Composition-based stats.
Identities = 143/155 (92%), Positives = 150/155 (96%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
ASRARLFKEYKEVQREK ADPDIQLICDD+NIFKWTA+IKGPSETP+EGGVFQLAFS+PE
Sbjct: 1 ASRARLFKEYKEVQREKSADPDIQLICDDSNIFKWTAIIKGPSETPFEGGVFQLAFSIPE 60
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YPL PPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPE DS
Sbjct: 61 QYPLLPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEADS 120
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
PLNCDSGNLLRSGD+RG+ SMA+MYTRLAAMPKKG
Sbjct: 121 PLNCDSGNLLRSGDIRGYQSMARMYTRLAAMPKKG 155
>pdb|2OXQ|A Chain A, Structure Of The Ubch5 :chip U-Box Complex
pdb|2OXQ|B Chain B, Structure Of The Ubch5 :chip U-Box Complex
Length = 152
Score = 265 bits (678), Expect = 8e-70, Method: Composition-based stats.
Identities = 63/152 (41%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE +++QR+ A + DD +F W A I GPS++PY+GGVF L P
Sbjct: 5 SMALKRIQKELQDLQRDPPAQCSAGPVGDD--LFHWQATIMGPSDSPYQGGVFFLTIHFP 62
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 63 TDYPFKPPKVAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPD 121
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D ++ +S D +N +A+ +T+ AM
Sbjct: 122 DPLVPDIAHIYKS-DKEKYNRLAREWTQKYAM 152
>gb|ABK23891.1| unknown [Picea sitchensis]
Length = 160
Score = 263 bits (672), Expect = 4e-69, Method: Composition-based stats.
Identities = 134/157 (85%), Positives = 141/157 (89%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
MQASRARLFKEYKEVQR+K D DI+L CDDTNIFKWTALIKGPSETPY+ GVF LA +V
Sbjct: 2 MQASRARLFKEYKEVQRDKSGDSDIKLSCDDTNIFKWTALIKGPSETPYQEGVFLLAMTV 61
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YPL PPQVRF+TKIFHPNVHFKTGEICLDILK AWSPAWTLQSVCRAIIALMAHPEP
Sbjct: 62 PEQYPLVPPQVRFVTKIFHPNVHFKTGEICLDILKTAWSPAWTLQSVCRAIIALMAHPEP 121
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCD GNLLRSGD RG+ SMA+MYTRLAA KG
Sbjct: 122 DSPLNCDCGNLLRSGDDRGYQSMARMYTRLAATANKG 158
>ref|NP_955958.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) [Danio
rerio]
gb|AAH59465.1| Ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) [Danio
rerio]
Length = 147
Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats.
Identities = 63/151 (41%), Positives = 93/151 (61%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++QR+ A + DD +F W A I GPS++PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLQRDPPAQCSAGPVGDD--LFHWQATIMGPSDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D ++ +S D +N +A+ +T+ AM
Sbjct: 118 PLVPDIAHIYKS-DKEKYNRLAREWTQKYAM 147
>ref|NP_001072891.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog) [Xenopus
tropicalis]
ref|NP_001086505.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Xenopus
laevis]
ref|NP_001088511.1| hypothetical protein LOC495381 [Xenopus laevis]
gb|AAH76728.1| Ube2d2-prov protein [Xenopus laevis]
gb|AAH84849.1| LOC495381 protein [Xenopus laevis]
gb|AAI25771.1| Ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog) [Xenopus
tropicalis]
Length = 147
Score = 259 bits (664), Expect = 3e-68, Method: Composition-based stats.
Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++QR+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIQKELNDLQRDPPAQCSAGPVGDD--LFHWQATIMGPTDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D + +S D +N +A+ +T+ AM
Sbjct: 118 PLVPDIAQIYKS-DKEKYNRLAREWTQKYAM 147
>gb|EAZ12964.1| hypothetical protein OsJ_002789 [Oryza sativa (japonica
cultivar-group)]
Length = 430
Score = 259 bits (663), Expect = 4e-68, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GPS++PY GGVF + P
Sbjct: 229 MASKRIQKELKDLQKDPPTSCSAGPVGED--MFHWQATIMGPSDSPYAGGVFLVTIHFPP 286
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK+ WSPA T+ V +I +L+ P PD
Sbjct: 287 DYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDD 345
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTR 149
PL + ++ ++ D + + A+ +T+
Sbjct: 346 PLVPEIAHMYKT-DRHKYENTARTWTQ 371
>ref|NP_957404.1| hypothetical protein LOC394085 [Danio rerio]
gb|AAH55599.1| Zgc:66323 [Danio rerio]
Length = 147
Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++QR+ + + +D +F W A I GP ++PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLQRDPPSQCSAGPLGED--LFHWQATIMGPGDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D ++ +S D +N +A+ +T+ AM
Sbjct: 118 PLVPDIAHIYKS-DKDKYNRLAREWTQKYAM 147
>ref|NP_567791.1| UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase
[Arabidopsis thaliana]
gb|AAY44849.1| ubiquitinating enzyme [Arabidopsis thaliana]
Length = 178
Score = 259 bits (662), Expect = 5e-68, Method: Composition-based stats.
Identities = 59/154 (38%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
++ + R+ KE K++Q++ + +D +F W A I GPS++PY GGVF +
Sbjct: 29 LEMASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHF 86
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P P
Sbjct: 87 PPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 145
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
D PL + ++ ++ D + S A+ +T+ AM
Sbjct: 146 DDPLVPEIAHMYKT-DKNKYESTARTWTQKYAMG 178
>gb|AAG40371.1|AF325019_1 AT4g27960 [Arabidopsis thaliana]
Length = 178
Score = 259 bits (662), Expect = 5e-68, Method: Composition-based stats.
Identities = 59/154 (38%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
++ + R+ KE K++Q++ + +D +F W A I GPS++PY GGVF +
Sbjct: 29 LEMASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHF 86
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P P
Sbjct: 87 PPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 145
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
D PL + ++ ++ D + S A+ +T+ AM
Sbjct: 146 DDPLVPEIAHMYKT-DKNKYESTARTWTQKYAMG 178
>ref|XP_001120139.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2-17 kDa
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(Protein effete) [Apis mellifera]
Length = 147
Score = 258 bits (661), Expect = 7e-68, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP ++PY+GGVF L P
Sbjct: 1 MALKRINKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + L ++ D +N +A+ +TR AM
Sbjct: 118 PLVPEIARLYKT-DREKYNELAREWTRKYAM 147
>ref|XP_001080152.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 1, UBC4/5
homolog [Rattus norvegicus]
Length = 384
Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats.
Identities = 60/148 (40%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 6 ARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYP 65
R+ KE ++QR+ A + DD +F W A I GP ++ Y+GGVF L P YP
Sbjct: 241 KRIQKELSDLQRDPPAHCSAGPVGDD--LFHWQATIMGPPDSAYQGGVFFLTVHFPTDYP 298
Query: 66 LQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 125
+PP++ F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL
Sbjct: 299 FKPPKIAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLV 357
Query: 126 CDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
D + +S D +N A+ +T+ AM
Sbjct: 358 PDIAQIYKS-DKEKYNRHAREWTQKYAM 384
>pdb|1Z2U|A Chain A, The 1.1a Crystallographic Structure Of Ubiquitin-
Conjugating Enzyme (Ubc-2) From Caenorhabditis Elegans:
Functional And Evolutionary Significance
Length = 150
Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP E+PY+GGVF L P
Sbjct: 4 MALKRIQKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPT 61
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 62 DYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 120
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 121 PLVPEIARIYKT-DRERYNQLAREWTQKYAM 150
>pdb|2ESK|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b, Wild-Type
Length = 149
Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 2 AMALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFP 59
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 60 TDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD 118
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 119 DPLVPEIARIYKT-DREKYNRIAREWTQKYAM 149
>ref|NP_057067.1| ubiquitin-conjugating enzyme E2D 4 (putative) [Homo sapiens]
ref|XP_001096263.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 4 (putative)
[Macaca mulatta]
ref|XP_001135740.1| PREDICTED: ubiquitin-conjugating enzyme E2D 4 (putative) isoform 3
[Pan troglodytes]
ref|XP_519070.2| PREDICTED: ubiquitin-conjugating enzyme E2D 4 (putative) isoform 4
[Pan troglodytes]
sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 (Ubiquitin-protein ligase D4)
(Ubiquitin carrier protein D4) (HBUCE1)
gb|AAD31180.1|AF125044_1 ubiquitin-conjugating enzyme HBUCE1 [Homo sapiens]
dbj|BAA91697.1| unnamed protein product [Homo sapiens]
gb|AAH04104.1| Ubiquitin-conjugating enzyme E2D 4 (putative) [Homo sapiens]
gb|EAL24010.1| ubiquitin-conjugating enzyme HBUCE1 [Homo sapiens]
gb|EAW94182.1| ubiquitin-conjugating enzyme E2D 4 (putative), isoform CRA_e [Homo
sapiens]
gb|EAW94184.1| ubiquitin-conjugating enzyme E2D 4 (putative), isoform CRA_e [Homo
sapiens]
Length = 147
Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++QR+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIQKELTDLQRDPPAQCSAGPVGDD--LFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIAHTYKA-DREKYNRLAREWTQKYAM 147
>gb|EAZ08485.1| hypothetical protein OsI_029717 [Oryza sativa (indica
cultivar-group)]
Length = 284
Score = 257 bits (658), Expect = 1e-67, Method: Composition-based stats.
Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 4/155 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++++ +D +F W A I GPS++PY GGVF + P
Sbjct: 1 MASKRIQKELMDLRKDPPTSCSAGPAGED--LFHWQATIMGPSDSPYAGGVFFVNIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK++HPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVNFQTKVYHPNIN-SNGSICLDILKEQWSPALTISKVLLSISSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
PL + ++ +S R + A+ +T+ AM G
Sbjct: 118 PLVPEIAHVYKSQRPR-YEETARAWTQKYAMESTG 151
>ref|XP_001699308.1| ubiquitin conjugating enzyme [Chlamydomonas reinhardtii]
gb|EDO98738.1| ubiquitin conjugating enzyme [Chlamydomonas reinhardtii]
Length = 148
Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats.
Identities = 60/152 (39%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++Q++ DD +F W A I GPS++PY GGVF + P
Sbjct: 1 MASKRIQKELQDLQKDPPTSCSAGPAGDD--LFHWQATIMGPSDSPYAGGVFFVNIMFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK++HPNV+ + G ICLDILK+ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVTFQTKVYHPNVNSQ-GSICLDILKDQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D R + A+ +TR AM
Sbjct: 118 PLVPEIAHIYKT-DRRRYEETAREWTRKYAMG 148
>ref|NP_731941.1| effete CG7425-PA [Drosophila melanogaster]
ref|NP_001119686.1| effete [Acyrthosiphon pisum]
ref|XP_310998.2| AGAP000145-PA [Anopheles gambiae str. PEST]
ref|XP_970430.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2-17 kDa
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(Effete protein) [Tribolium castaneum]
ref|XP_001605481.1| PREDICTED: similar to ubiquitin-conjugating enzyme [Nasonia
vitripennis]
ref|XP_001663154.1| ubiquitin-conjugating enzyme E2 [Aedes aegypti]
sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa (Ubiquitin-protein ligase)
(Ubiquitin carrier protein) (Protein effete)
emb|CAA44453.1| ubiquitin-conjugating enzyme [Drosophila melanogaster]
gb|AAF55093.1| CG7425-PA [Drosophila melanogaster]
gb|AAL25343.1| GH14739p [Drosophila melanogaster]
gb|AAT01083.1| putative ubiquitin-conjugating enzyme [Homalodisca coagulata]
gb|EAA06420.3| AGAP000145-PA [Anopheles gambiae str. PEST]
gb|ABD72686.1| putative ubiquitin-conjugating enzyme [Acyrthosiphon pisum]
gb|ABF18325.1| ubiquitin-conjugating enzyme [Aedes aegypti]
gb|EAT45631.1| ubiquitin-conjugating enzyme E2 [Aedes aegypti]
Length = 147
Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP ++PY+GGVF L P
Sbjct: 1 MALKRINKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +TR AM
Sbjct: 118 PLVPEIARIYKT-DREKYNELAREWTRKYAM 147
>ref|XP_001773168.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ62021.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 163
Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats.
Identities = 124/157 (78%), Positives = 136/157 (86%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
M SRARLFKEYKEV REK D DIQL CDDTNI++WTA IKGP +TPY+ GVFQLA +V
Sbjct: 1 MTTSRARLFKEYKEVHREKGGDNDIQLTCDDTNIYRWTAYIKGPVDTPYQEGVFQLAVNV 60
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YPL PPQVRF+TKIFHPNVHFKTGEICLDILK AWSPAWTLQSVCRA+IAL+AHPE
Sbjct: 61 PEQYPLVPPQVRFVTKIFHPNVHFKTGEICLDILKTAWSPAWTLQSVCRAVIALLAHPEA 120
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
DSPLNCD+GNLLRSGD RG+ SM+QMYTRL A+ G
Sbjct: 121 DSPLNCDAGNLLRSGDHRGYRSMSQMYTRLCAVHSNG 157
>pdb|2C4O|B Chain B, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
pdb|2C4O|C Chain C, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
pdb|2C4O|D Chain D, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
pdb|2CLW|B Chain B, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
pdb|2CLW|C Chain C, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
pdb|2CLW|D Chain D, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
Length = 165
Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 18 SMALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFP 75
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 76 TDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD 134
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 135 DPLVPEIARIYKT-DREKYNRIAREWTQKYAM 165
>ref|NP_502065.1| LEThal family member (let-70) [Caenorhabditis elegans]
ref|XP_001670339.1| Hypothetical protein CBG06002 [Caenorhabditis briggsae AF16]
ref|XP_001899392.1| ubiquitin-conjugating enzyme ubc-2 [Brugia malayi]
sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 (Ubiquitin-protein ligase 2)
(Ubiquitin carrier protein 2) (Lethal protein 70)
emb|CAA92745.1| Hypothetical protein M7.1 [Caenorhabditis elegans]
gb|AAB25489.2| ubiquitin-conjugating enzyme [Caenorhabditis elegans]
gb|EDP32200.1| ubiquitin-conjugating enzyme ubc-2, putative [Brugia malayi]
emb|CAP26360.1| C. briggsae CBR-LET-70 protein [Caenorhabditis briggsae]
Length = 147
Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP E+PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DRERYNQLAREWTQKYAM 147
>ref|NP_001082922.1| hypothetical protein LOC100001914 [Danio rerio]
gb|AAI39560.1| Zgc:162263 protein [Danio rerio]
Length = 147
Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++QR+ A + +D +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIQKELTDLQRDPPAQCSAGPVGED--LFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIAHTYKA-DREKYNRLAREWTQKYAM 147
>emb|CAJ57642.1| putative ubiquitin conjugating enzyme 2 [Oesophagostomum dentatum]
Length = 147
Score = 256 bits (654), Expect = 5e-67, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP E+PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DRDRYNQLAREWTQKYAM 147
>ref|NP_003330.1| ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sapiens]
ref|NP_064296.1| ubiquitin-conjugating enzyme E2D 2 [Mus musculus]
ref|NP_001016064.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog) [Xenopus
tropicalis]
ref|NP_001032369.1| ubiquitin-conjugating enzyme E2D 2 [Rattus norvegicus]
ref|NP_001039961.1| ubiquitin-conjugating enzyme E2D 2 [Bos taurus]
ref|NP_001084434.1| ubiquitin conjugating enzyme E2 [Xenopus laevis]
ref|XP_517968.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 5 [Pan
troglodytes]
ref|XP_848325.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2
(Ubiquitin-protein ligase D2) (Ubiquitin carrier protein
D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB
2) isoform 1 [Canis familiaris]
ref|XP_855896.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2
(Ubiquitin-protein ligase D2) (Ubiquitin carrier protein
D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB
2) isoform 3 [Canis familiaris]
ref|XP_855942.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2
(Ubiquitin-protein ligase D2) (Ubiquitin carrier protein
D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB
2) isoform 4 [Canis familiaris]
ref|XP_855983.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2
(Ubiquitin-protein ligase D2) (Ubiquitin carrier protein
D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB
2) isoform 5 [Canis familiaris]
ref|XP_001476589.1| PREDICTED: similar to Chain B, Crystal Structure Of Human
Ubiquitin-Conjugating Enzyme Ubch5b [Mus musculus]
sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2)
(Ubiquitin carrier protein D2) (Ubiquitin-conjugating
enzyme E2-17 kDa 2) (E2(17)KB 2)
sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2)
(Ubiquitin carrier protein D2) (Ubiquitin-conjugating
enzyme E2-17 kDa 2) (E2(17)KB 2)
sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2)
(Ubiquitin carrier protein D2) (Ubiquitin-conjugating
enzyme E2-17 kDa 2) (E2(17)KB 2)
sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2)
(Ubiquitin carrier protein D2) (Xubc4)
sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2)
(Ubiquitin carrier protein D2)
pdb|1UR6|A Chain A, Nmr Based Structural Model Of The Ubch5b-Cnot4 Complex
pdb|1W4U|A Chain A, Nmr Solution Structure Of The Ubiquitin Conjugating Enzyme
Ubch5b
gb|AAA85101.1| ubiquitin conjugating enzyme
gb|AAA91460.1| UbcH5B
gb|AAB05772.1| ubiquitin conjugating enzyme
gb|AAH03923.1| Ube2d2 protein [Mus musculus]
dbj|BAD06215.1| ubiquitin conjugating enzyme E2 [Xenopus laevis]
gb|AAH84359.1| Xubc4 protein [Xenopus laevis]
gb|AAH33349.1| Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Homo
sapiens]
gb|AAX35690.1| ubiquitin-conjugating enzyme E2 D2 transcript variant 1 [Homo
sapiens]
dbj|BAE35877.1| unnamed protein product [Mus musculus]
dbj|BAE24085.1| unnamed protein product [Mus musculus]
dbj|BAE36719.1| unnamed protein product [Mus musculus]
dbj|BAE28338.1| unnamed protein product [Mus musculus]
dbj|BAE22869.1| unnamed protein product [Mus musculus]
emb|CAJ81618.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Xenopus
tropicalis]
gb|AAI14655.1| Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Bos
taurus]
gb|EAW62095.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), isoform
CRA_a [Homo sapiens]
gb|EAW62096.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), isoform
CRA_a [Homo sapiens]
gb|EDK97145.1| mCG121966 [Mus musculus]
gb|EDL76278.1| ubc2e ubiquitin conjugating enzyme, isoform CRA_a [Rattus
norvegicus]
Length = 147
Score = 256 bits (654), Expect = 5e-67, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DREKYNRIAREWTQKYAM 147
>pdb|2ESQ|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Mutant
Ser94gly
Length = 149
Score = 255 bits (653), Expect = 6e-67, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 2 AMALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFP 59
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F T+I+HPN++ G ICLDIL++ W PA T+ V +I +L+ P PD
Sbjct: 60 TDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWGPALTISKVLLSICSLLCDPNPD 118
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 119 DPLVPEIARIYKT-DREKYNRIAREWTQKYAM 149
>ref|XP_001893776.1| ubiquitin-conjugating enzyme E2-17 kDa [Brugia malayi]
gb|EDP37374.1| ubiquitin-conjugating enzyme E2-17 kDa, putative [Brugia malayi]
Length = 147
Score = 255 bits (652), Expect = 7e-67, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP E+PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+++HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRMYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARVYKT-DRDRYNQLAREWTQKYAM 147
>ref|NP_957253.1| ubiquitin-conjugating enzyme E2D 3 [Danio rerio]
gb|AAH48896.1| Zgc:55886 protein [Danio rerio]
gb|AAH65678.1| Zgc:55886 [Danio rerio]
gb|AAI64949.1| Zgc:55886 protein [synthetic construct]
Length = 147
Score = 255 bits (652), Expect = 8e-67, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIHKELHDLGRDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DREKYNRIAREWTQKYAM 147
>ref|XP_001764055.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ71194.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 148
Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GP ++PY GGVF + P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPPDSPYAGGVFLVTIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + + S A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRQKYESTARSWTQKYAMG 148
>ref|XP_001495725.1| PREDICTED: similar to ubiquitin-conjugating enzyme HBUCE1 [Equus
caballus]
Length = 150
Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats.
Identities = 63/154 (40%), Positives = 93/154 (60%), Gaps = 5/154 (3%)
Query: 1 MQASR-ARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFS 59
M AS+ R KE ++QR+ A + DD +F W A I GP+++PY+GGVF L
Sbjct: 1 MAASKLKRYRKELTDLQRDPPAQCSAGPVGDD--LFHWQATIMGPNDSPYQGGVFFLTIH 58
Query: 60 VPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPE 119
P YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P
Sbjct: 59 FPTDYPFKPPKVAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPN 117
Query: 120 PDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PD PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PDDPLVPEIAHTYKA-DREKYNRLAREWTQKYAM 150
>pdb|2C4P|A Chain A, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5a
pdb|2C4P|B Chain B, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5a
Length = 165
Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats.
Identities = 60/152 (39%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++QR+ A + DD +F W A I GP ++ Y+GGVF L P
Sbjct: 18 SMALKRIQKELSDLQRDPPAHCSAGPVGDD--LFHWQATIMGPPDSAYQGGVFFLTVHFP 75
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP++ F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 76 TDYPFKPPKIAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPD 134
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D + +S D +N A+ +T+ AM
Sbjct: 135 DPLVPDIAQIYKS-DKEKYNRHAREWTQKYAM 165
>gb|EAY75244.1| hypothetical protein OsI_003091 [Oryza sativa (indica
cultivar-group)]
Length = 371
Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GPS++PY GGVF + P
Sbjct: 225 MASKRIQKELKDLQKDPPTSCSAGPVGED--MFHWQATIMGPSDSPYAGGVFLVTIHFPP 282
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK+ WSPA T+ V +I +L+ P PD
Sbjct: 283 DYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDD 341
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTR 149
PL + ++ ++ D + + A+ +T+
Sbjct: 342 PLVPEIAHMYKT-DRHKYENTARTWTQ 367
>ref|NP_001093355.1| hypothetical protein LOC100101299 [Xenopus laevis]
gb|AAI42570.1| LOC100101299 protein [Xenopus laevis]
gb|ABV25624.1| ubiquitin conjugating enzyme E2 [Xenopus laevis]
Length = 147
Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++QR+ A + +D +F W A I GP+++P++GGVF L P
Sbjct: 1 MALKRIQKELMDLQRDPPAQCSAGPVGED--LFHWQATIMGPNDSPFQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIAHTYKA-DREKYNRLAREWTQKYAM 147
>ref|XP_001475660.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2 UbcH-ben [Mus
musculus]
Length = 232
Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats.
Identities = 63/153 (41%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
M R+ KE + + E V P I+ D++N + +I GP ++P+EGG F+L +
Sbjct: 1 MAGLPRRIIKETQRLLAEPV--PGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFL 58
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
PE YP+ P+VRF+TKI+HPNV K G ICLDILK+ WSPA +++V +I AL++ P P
Sbjct: 59 PEEYPMAAPKVRFMTKIYHPNVD-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
D PL D ++ + + A+ +TRL AM
Sbjct: 118 DDPLANDVAEQWKTNEAQAIE-TARAWTRLYAM 149
>pdb|2ESP|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Mutant
Ile88ala
Length = 149
Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 2 AMALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFP 59
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F T+I+HPN++ G ICLD L++ WSPA T+ V +I +L+ P PD
Sbjct: 60 TDYPFKPPKVAFTTRIYHPNIN-SNGSICLDALRSQWSPALTISKVLLSICSLLCDPNPD 118
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 119 DPLVPEIARIYKT-DREKYNRIAREWTQKYAM 149
>ref|NP_564828.1| UBC28; ubiquitin-protein ligase [Arabidopsis thaliana]
ref|NP_001031228.1| UBC28; ubiquitin-protein ligase [Arabidopsis thaliana]
gb|AAK60309.1|AF385718_1 At1g64230/F22C12_17 [Arabidopsis thaliana]
gb|AAM11574.1|AF480945_1 ubiquitin conjugating enzyme UBC9A [Arabidopsis thaliana]
gb|AAM91500.1| At1g64230/F22C12_17 [Arabidopsis thaliana]
gb|AAY44867.1| ubiquitinating enzyme [Arabidopsis thaliana]
Length = 148
Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GPS++PY GGVF + P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPNV+ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFRTKVFHPNVN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + S A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRAKYESTARSWTQKYAMG 148
>pdb|2ESO|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Mutant
Ile37ala
Length = 149
Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++ R+ A + DD +F W A GP+++PY+GGVF L P
Sbjct: 2 AMALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATAMGPNDSPYQGGVFFLTIHFP 59
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 60 TDYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD 118
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 119 DPLVPEIARIYKT-DREKYNRIAREWTQKYAM 149
>gb|AAC41750.1| ubiquitin conjugating enzyme
prf||2111484A ubiquitin-conjugating enzyme
Length = 147
Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYQT-DREKYNRIAREWTQKYAM 147
>gb|EAZ01104.1| hypothetical protein OsI_022336 [Oryza sativa (indica
cultivar-group)]
gb|EAZ37148.1| hypothetical protein OsJ_020631 [Oryza sativa (japonica
cultivar-group)]
Length = 148
Score = 254 bits (650), Expect = 1e-66, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GP+++PY GGVF ++ P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVGED--MFHWQATIMGPADSPYAGGVFLVSIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFKTKVFHPNIN-SNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + S A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRAKYESTARGWTQKYAMG 148
>ref|NP_001054191.1| Os04g0667800 [Oryza sativa (japonica cultivar-group)]
emb|CAE02801.1| OSJNBa0043A12.6 [Oryza sativa (japonica cultivar-group)]
emb|CAH68307.1| B0811B10.8 [Oryza sativa (indica cultivar-group)]
dbj|BAF16105.1| Os04g0667800 [Oryza sativa (japonica cultivar-group)]
emb|CAH66000.1| H1005F08.29 [Oryza sativa (indica cultivar-group)]
gb|EAY95969.1| hypothetical protein OsI_017202 [Oryza sativa (indica
cultivar-group)]
Length = 148
Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GPS++P+ GGVF + P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVGED--MFHWQATIMGPSDSPFAGGVFLVNIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVSFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + S A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRAKYESTARSWTQKYAMG 148
>ref|XP_001758801.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ76307.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 148
Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GP ++PY GGVF + P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPPDSPYAGGVFLVTIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + + + A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRQKYEATARSWTQKYAMG 148
>ref|XP_001764546.1| predicted protein [Physcomitrella patens subsp. patens]
ref|XP_001764637.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ70528.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ70619.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 148
Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GP ++PY GGVF + P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPPDSPYAGGVFLVTIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + S A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRHKYESTARSWTQKYAMG 148
>ref|NP_566331.1| UBC11 (ubiquitin-conjugating enzyme 11); ubiquitin-protein ligase
[Arabidopsis thaliana]
sp|P35134|UBC11_ARATH Ubiquitin-conjugating enzyme E2-17 kDa 11 (Ubiquitin-protein ligase
11) (Ubiquitin carrier protein 11)
gb|AAG51362.1|AC012562_23 putative ubiquitin conjugating enzyme; 52410-53412 [Arabidopsis
thaliana]
gb|AAL36225.1| putative E2, ubiquitin-conjugating enzyme UBC11 [Arabidopsis
thaliana]
gb|AAM14162.1| putative ubiquitin conjugating enzyme 11 (UBC11) [Arabidopsis
thaliana]
gb|AAM63316.1| E2, ubiquitin-conjugating enzyme UBC11 [Arabidopsis thaliana]
gb|AAY44851.1| ubiquitinating enzyme [Arabidopsis thaliana]
dbj|BAF00202.1| putative ubiquitin conjugating enzyme [Arabidopsis thaliana]
Length = 148
Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 91/152 (59%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ ++ + +D +F W A I GP E+PY GGVF ++ P
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAED--MFHWQATIMGPPESPYAGGVFLVSIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK++HPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVSFKTKVYHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + S A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRSKYESTARSWTQKYAMG 148
>gb|AAP36440.1| Homo sapiens ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog,
yeast) [synthetic construct]
gb|AAX29534.1| ubiquitin-conjugating enzyme E2D 1 [synthetic construct]
Length = 148
Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 88/151 (58%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++QR+ A + DD +F W A I GP ++ Y+GGVF L P
Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDD--LFHWQATIMGPPDSAYQGGVFFLTVHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP++ F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKIAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D + +S D +N A+ +T+ AM
Sbjct: 118 PLVPDIAQIYKS-DKEKYNRHAREWTQKYAM 147
>ref|NP_003329.1| ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
ref|NP_663395.1| ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog [Mus musculus]
ref|NP_001033256.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) [Bos
taurus]
ref|NP_001072142.1| UB2D1 [Sus scrofa]
ref|NP_001102000.1| ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog [Rattus
norvegicus]
ref|XP_421525.1| PREDICTED: similar to ubiquitin conjugating enzyme [Gallus gallus]
ref|XP_850730.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 1, UBC4/5
homolog [Canis familiaris]
ref|XP_001097762.1| PREDICTED: ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog,
yeast) [Macaca mulatta]
ref|XP_001163868.1| PREDICTED: ubiquitin-conjugating enzyme E2D 1 isoform 2 [Pan
troglodytes]
ref|XP_001363765.1| PREDICTED: similar to Chain A, Crystal Structure Of Human
Ubiquitin-Conjugating Enzyme Ubch5a [Monodelphis
domestica]
ref|XP_001503425.1| PREDICTED: similar to Chain A, Crystal Structure Of Human
Ubiquitin-Conjugating Enzyme Ubch5a [Equus caballus]
sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 (Ubiquitin-protein ligase D1)
(Ubiquitin carrier protein D1) (UbcH5)
(Ubiquitin-conjugating enzyme E2-17 kDa 1) (E2(17)KB 1)
(UBC4/5 homolog) (Stimulator of Fe transport) (SFT)
sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 (Ubiquitin-protein ligase D1)
(Ubiquitin carrier protein D1) (Ubiquitin-conjugating
enzyme E2-17 kDa 1) (E2(17)KB 1)
sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 (Ubiquitin-protein ligase D1)
(Ubiquitin carrier protein D1)
gb|AAM81086.1|AF257220_1 ubiquitin-conjugating enzyme [Homo sapiens]
emb|CAA55019.1| ubiquitin conjugating enzyme [Homo sapiens]
gb|AAH05980.1| Ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) [Homo
sapiens]
gb|AAH15997.1| Ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) [Homo
sapiens]
gb|AAH19464.1| Ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast) [Mus
musculus]
emb|CAC82177.1| ubiquitin-conjugating enzyme [Homo sapiens]
emb|CAC82097.1| ubiquitin-conjugating enzyme [Homo sapiens]
gb|AAP35690.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) [Homo
sapiens]
gb|AAX42082.1| ubiquitin-conjugating enzyme E2D 1 [synthetic construct]
gb|AAX42083.1| ubiquitin-conjugating enzyme E2D 1 [synthetic construct]
dbj|BAE25905.1| unnamed protein product [Mus musculus]
dbj|BAE28506.1| unnamed protein product [Mus musculus]
gb|AAI11176.1| Ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) [Bos
taurus]
gb|ABI96192.1| UB2D1 [Sus scrofa]
gb|EAW54169.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast), isoform
CRA_c [Homo sapiens]
gb|EAW54170.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast), isoform
CRA_c [Homo sapiens]
gb|ABM84037.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)
[synthetic construct]
gb|ABM87384.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast)
[synthetic construct]
gb|EDL31952.1| ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast), isoform
CRA_b [Mus musculus]
gb|EDL97256.1| ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog (yeast)
(predicted) [Rattus norvegicus]
dbj|BAF84590.1| unnamed protein product [Homo sapiens]
Length = 147
Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 88/151 (58%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++QR+ A + DD +F W A I GP ++ Y+GGVF L P
Sbjct: 1 MALKRIQKELSDLQRDPPAHCSAGPVGDD--LFHWQATIMGPPDSAYQGGVFFLTVHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP++ F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKIAFTTKIYHPNIN-SNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D + +S D +N A+ +T+ AM
Sbjct: 118 PLVPDIAQIYKS-DKEKYNRHAREWTQKYAM 147
>emb|CAJ57641.1| putative ubiquitin conjugating enzyme 2 [Oesophagostomum dentatum]
Length = 147
Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP E+PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTTSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DRDRYNQLAREWTQKYAM 147
>emb|CAN77946.1| hypothetical protein [Vitis vinifera]
emb|CAO45195.1| unnamed protein product [Vitis vinifera]
Length = 148
Score = 253 bits (648), Expect = 2e-66, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + DD +F W A I GPS++P+ GGVF ++ P
Sbjct: 1 MASKRINKELKDLQKDPPTSCSAGPVGDD--MFHWQATIMGPSDSPFAGGVFLVSIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVSFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + + A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRAKYETTARSWTQKYAMG 148
>ref|NP_955865.1| ubiquitin-conjugating enzyme E2D 2 [Danio rerio]
ref|XP_001338095.1| PREDICTED: hypothetical protein [Danio rerio]
gb|AAH47863.1| Zgc:56340 [Danio rerio]
Length = 147
Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+E+PY+GGVF L P
Sbjct: 1 MALKRIQKELTDLARDPPAQCSAGPVGDD--VFHWQATIMGPNESPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DTEKYNRIAREWTQKYAM 147
Searching..................................................done
Results from round 3
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
pdb|2OXQ|A Chain A, Structure Of The Ubch5 :chip U-Box Comp... 294 9e-79
gb|EAZ12964.1| hypothetical protein OsJ_002789 [Oryza sativ... 293 3e-78
ref|NP_955958.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5... 292 7e-78
pdb|2ESK|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2)... 291 8e-78
ref|NP_567791.1| UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubi... 291 1e-77
pdb|1Z2U|A Chain A, The 1.1a Crystallographic Structure Of ... 290 2e-77
gb|AAG40371.1|AF325019_1 AT4g27960 [Arabidopsis thaliana] 290 2e-77
ref|XP_001120139.1| PREDICTED: similar to Ubiquitin-conjuga... 290 2e-77
pdb|2C4O|B Chain B, Crystal Structure Of Human Ubiquitin-Co... 290 2e-77
ref|NP_731941.1| effete CG7425-PA [Drosophila melanogaster]... 289 3e-77
ref|NP_502065.1| LEThal family member (let-70) [Caenorhabdi... 289 3e-77
ref|NP_001072891.1| ubiquitin-conjugating enzyme E2D 1 (UBC... 289 4e-77
ref|NP_057067.1| ubiquitin-conjugating enzyme E2D 4 (putati... 289 4e-77
ref|NP_957253.1| ubiquitin-conjugating enzyme E2D 3 [Danio ... 289 4e-77
ref|NP_003330.1| ubiquitin-conjugating enzyme E2D 2 isoform... 289 5e-77
pdb|2ESQ|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2)... 289 5e-77
emb|CAJ57642.1| putative ubiquitin conjugating enzyme 2 [Oe... 289 6e-77
pdb|2ESO|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2)... 288 7e-77
ref|NP_001082922.1| hypothetical protein LOC100001914 [Dani... 288 8e-77
pdb|2ESP|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2)... 288 8e-77
gb|EAY75244.1| hypothetical protein OsI_003091 [Oryza sativ... 288 8e-77
ref|NP_871621.1| ubiquitin-conjugating enzyme E2D 3 isoform... 288 1e-76
ref|NP_957404.1| hypothetical protein LOC394085 [Danio reri... 288 1e-76
gb|AAC41750.1| ubiquitin conjugating enzyme >gi|1096569|prf... 287 1e-76
ref|XP_001893776.1| ubiquitin-conjugating enzyme E2-17 kDa ... 287 1e-76
ref|NP_001093355.1| hypothetical protein LOC100101299 [Xeno... 287 2e-76
ref|XP_001699308.1| ubiquitin conjugating enzyme [Chlamydom... 287 2e-76
gb|EAZ08485.1| hypothetical protein OsI_029717 [Oryza sativ... 287 2e-76
ref|XP_001764055.1| predicted protein [Physcomitrella paten... 287 2e-76
gb|ACO13579.1| Ubiquitin-conjugating enzyme E2 D2 [Esox luc... 286 2e-76
ref|NP_003331.1| ubiquitin-conjugating enzyme E2D 3 isoform... 286 3e-76
pdb|1X23|A Chain A, Crystal Structure Of Ubch5c >gi|6636040... 286 3e-76
ref|NP_001054191.1| Os04g0667800 [Oryza sativa (japonica cu... 286 3e-76
ref|NP_564828.1| UBC28; ubiquitin-protein ligase [Arabidops... 286 3e-76
ref|NP_001072141.1| UB2D2 [Sus scrofa] >gi|121957312|sp|Q06... 286 3e-76
ref|XP_001758801.1| predicted protein [Physcomitrella paten... 286 4e-76
emb|CAJ57641.1| putative ubiquitin conjugating enzyme 2 [Oe... 286 4e-76
emb|CAN77946.1| hypothetical protein [Vitis vinifera] >gi|1... 286 4e-76
ref|XP_001367781.1| PREDICTED: similar to ubiquitin conjuga... 286 5e-76
ref|XP_001764546.1| predicted protein [Physcomitrella paten... 286 5e-76
gb|EAZ01104.1| hypothetical protein OsI_022336 [Oryza sativ... 285 5e-76
dbj|BAB22614.1| unnamed protein product [Mus musculus] 285 6e-76
ref|XP_001080152.1| PREDICTED: similar to ubiquitin-conjuga... 285 6e-76
ref|NP_956246.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5... 285 6e-76
gb|AAH66917.1| Ubiquitin-conjugating enzyme E2D 3 (UBC4/5 h... 285 8e-76
gb|AAL99224.1| ubiquitin-conjugating enzyme E2 [Gossypium t... 285 8e-76
emb|CAG33197.1| UBE2D3 [Homo sapiens] 284 9e-76
pdb|2C4P|A Chain A, Crystal Structure Of Human Ubiquitin-Co... 284 9e-76
emb|CAN77754.1| hypothetical protein [Vitis vinifera] >gi|1... 284 9e-76
emb|CAJ57640.1| putative ubiquitin conjugating enzyme 2 [Oe... 284 9e-76
gb|ABK95908.1| unknown [Populus trichocarpa] 284 1e-75
ref|NP_955865.1| ubiquitin-conjugating enzyme E2D 2 [Danio ... 284 1e-75
gb|ABK93202.1| unknown [Populus trichocarpa] 284 1e-75
gb|AAD51109.1|AF176040_1 ubiquitin-conjugating enzyme UBC2 ... 284 1e-75
pdb|2C4O|A Chain A, Crystal Structure Of Human Ubiquitin-Co... 284 1e-75
sp|P35135|UBC4_LYCES Ubiquitin-conjugating enzyme E2-17 kDa... 284 1e-75
gb|ACC38297.1| E2 ubiquitin-conjugating enzyme UBC10 [Brass... 284 1e-75
gb|ABK94185.1| unknown [Populus trichocarpa] >gi|118484898|... 284 1e-75
gb|ACB87921.1| ubiquitin conjugating enzyme 3 [Malus x dome... 284 1e-75
gb|ABK94824.1| unknown [Populus trichocarpa] >gi|157358204|... 284 1e-75
ref|NP_001043763.1| Os01g0658400 [Oryza sativa (japonica cu... 284 1e-75
gb|ABK94176.1| unknown [Populus trichocarpa] >gi|118486683|... 284 1e-75
gb|ABQ65169.1| ubiquitin conjugating enzyme E2 [Adiantum ca... 284 1e-75
pdb|2FUH|A Chain A, Solution Structure Of The Ubch5cUB NON-... 284 1e-75
dbj|BAE31970.1| unnamed protein product [Mus musculus] >gi|... 284 2e-75
gb|AAU82109.1| ubiquitin-conjugating enzyme [Triticum aesti... 284 2e-75
ref|NP_849462.1| UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubi... 284 2e-75
gb|AAP36440.1| Homo sapiens ubiquitin-conjugating enzyme E2... 284 2e-75
gb|EAY85278.1| hypothetical protein OsI_006511 [Oryza sativ... 284 2e-75
ref|NP_566331.1| UBC11 (ubiquitin-conjugating enzyme 11); u... 284 2e-75
gb|ABK95528.1| unknown [Populus trichocarpa] 284 2e-75
gb|ABI84263.1| ubiquitin carrier-like protein [Arachis hypo... 284 2e-75
emb|CAI29540.1| ubiquitin conjugating enzyme E2 [Oryza sati... 283 2e-75
gb|ABI98679.1| ubiquitin-conjugating enzyme H5b [Litopenaeu... 283 2e-75
ref|NP_003329.1| ubiquitin-conjugating enzyme E2D 1 [Homo s... 283 2e-75
gb|EAY76292.1| hypothetical protein OsI_004139 [Oryza sativ... 283 2e-75
gb|AAL99222.1| ubiquitin-conjugating enzyme E2 [Gossypium h... 283 3e-75
gb|AAI55783.1| Unknown (protein for MGC:174834) [Danio rerio] 283 3e-75
ref|XP_517826.2| PREDICTED: similar to ubiquitin conjugatin... 283 3e-75
ref|NP_568788.1| UBC10 (UBIQUITIN-CONJUGATING ENZYME 10); u... 283 3e-75
gb|AAL99223.1| ubiquitin-conjugating enzyme E2 [Gossypium a... 283 3e-75
ref|NP_001045711.1| Os02g0120600 [Oryza sativa (japonica cu... 283 4e-75
ref|NP_001104888.1| ubiquitin conjugating enzyme [Zea mays]... 283 4e-75
ref|NP_851114.1| UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubi... 283 4e-75
gb|AAA64427.1| ubiquitin conjugating enzyme 282 5e-75
ref|XP_001793346.1| hypothetical protein SNOG_02749 [Phaeos... 282 5e-75
dbj|BAD08135.1| ubiquitin-conjugating enzyme [Oryza sativa ... 282 6e-75
emb|CAA51821.1| ubiquitin conjugating enzyme E2 [Solanum ly... 282 6e-75
gb|AAM63450.1| E2, ubiquitin-conjugating enzyme 10 (UBC10) ... 282 6e-75
gb|AAR83891.1| ubiquitin-conjugating enzyme 8 [Capsicum ann... 282 7e-75
gb|ACO35043.1| ubiquitin-conjugating enzyme E2 D4 [Larimich... 282 7e-75
ref|NP_001068603.1| ubiquitin-conjugating enzyme E2D 3 [Bos... 282 7e-75
gb|ABR25804.1| ubiquitin-conjugating enzyme e2-17 kDa [Oryz... 282 7e-75
gb|ABK93164.1| unknown [Populus trichocarpa] 281 7e-75
gb|ACB87920.1| ubiquitin conjugating enzyme 2 [Malus x dome... 281 7e-75
ref|XP_001743467.1| predicted protein [Monosiga brevicollis... 281 8e-75
gb|EDU41418.1| ubiquitin-conjugating enzyme E2-16 kDa [Pyre... 281 8e-75
gb|AAN03469.1| ubiquitin-conjugation enzyme [Glycine max] 281 9e-75
ref|XP_001495725.1| PREDICTED: similar to ubiquitin-conjuga... 281 9e-75
ref|XP_001824449.1| hypothetical protein [Aspergillus oryza... 281 1e-74
gb|AAF24583.1|AC007764_25 F22C12.2 [Arabidopsis thaliana] 281 1e-74
dbj|BAB93371.1| ubiquitin conjugating enzyme [Oryza sativa ... 281 1e-74
gb|ABK21411.1| unknown [Picea sitchensis] >gi|116782144|gb|... 281 1e-74
ref|XP_755003.1| ubiquitin conjugating enzyme (UbcD) [Asper... 281 1e-74
emb|CAG01241.1| unnamed protein product [Tetraodon nigrovir... 281 1e-74
gb|AAY29571.1| immature spike ubiquitin-conjugating enzyme ... 281 1e-74
gb|AAM62889.1| E2, ubiquitin-conjugating enzyme UBC8 [Arabi... 281 1e-74
ref|XP_001785852.1| predicted protein [Physcomitrella paten... 281 1e-74
gb|AAL85988.1| putative E2, ubiquitin-conjugating enzyme UB... 281 1e-74
pdb|2AYV|A Chain A, Crystal Structure Of A Putative Ubiquit... 281 1e-74
ref|XP_001246730.1| ubiquitin-conjugating enzyme E2 [Coccid... 281 2e-74
ref|XP_001270622.1| ubiquitin conjugating enzyme (UbcD), pu... 280 2e-74
ref|XP_001587931.1| ubiquitin-conjugating enzyme E2 [Sclero... 280 2e-74
ref|NP_001117973.1| ubiquitin-conjugating enzyme E2D 2 isof... 280 2e-74
ref|XP_001635732.1| predicted protein [Nematostella vectens... 280 2e-74
ref|NP_595283.1| ubiquitin conjugating enzyme Ubc4 [Schizos... 280 2e-74
ref|XP_757129.1| ubiquitin-conjugating enzyme E2-16 kDa [Us... 280 2e-74
ref|XP_001376552.1| PREDICTED: similar to Chain B, Crystal ... 280 2e-74
gb|ABK21244.1| unknown [Picea sitchensis] >gi|116790480|gb|... 280 2e-74
ref|XP_370047.2| ubiquitin conjugating enzyme UBC1 [Magnapo... 280 2e-74
ref|NP_871622.1| ubiquitin-conjugating enzyme E2D 3 isoform... 280 2e-74
ref|NP_001046486.1| Os02g0261100 [Oryza sativa (japonica cu... 280 3e-74
gb|ABA81863.1| ubiquitin-conjugating enzyme 8-like [Solanum... 279 3e-74
ref|NP_568835.1| UBC30 (UBIQUITIN-CONJUGATING ENZYME 30); u... 279 3e-74
dbj|BAE72681.1| hypothetical protein [Epichloe festucae] 279 3e-74
ref|XP_001546715.1| ubiquitin-conjugating enzyme E2-16 kDa ... 279 4e-74
ref|XP_959933.2| hypothetical protein NCU02289 [Neurospora ... 279 4e-74
ref|XP_001217453.1| ubiquitin-conjugating enzyme E2 4 [Aspe... 279 4e-74
gb|AAL99219.1| ubiquitin-conjugating enzyme E2 [Gossypium h... 279 4e-74
emb|CAN73628.1| hypothetical protein [Vitis vinifera] >gi|1... 278 7e-74
ref|XP_001497930.1| PREDICTED: similar to ubiquitin conjuga... 278 8e-74
ref|XP_001544213.1| ubiquitin-conjugating enzyme E2-16 kDa ... 278 8e-74
ref|XP_001729512.1| hypothetical protein MGL_3547 [Malassez... 278 8e-74
ref|NP_112263.1| ubiquitin-conjugating enzyme [Rattus norve... 278 9e-74
gb|ABK24465.1| unknown [Picea sitchensis] 278 1e-73
ref|NP_568595.2| UBC8 (UBIQUITIN CONJUGATING ENZYME 8); ubi... 278 1e-73
dbj|BAB26188.1| unnamed protein product [Mus musculus] 278 1e-73
ref|XP_001904775.1| unnamed protein product [Podospora anse... 278 1e-73
sp|O74196|UBC1_COLGL Ubiquitin-conjugating enzyme E2-16 kDa... 278 1e-73
ref|XP_001376653.1| PREDICTED: similar to ubiquitin-conjuga... 278 1e-73
ref|XP_502855.1| hypothetical protein [Yarrowia lipolytica]... 277 1e-73
ref|XP_001368675.1| PREDICTED: similar to Ubiquitin-conjuga... 277 1e-73
ref|XP_001502490.1| PREDICTED: similar to Chain B, Crystal ... 277 2e-73
ref|XP_001881094.1| predicted protein [Laccaria bicolor S23... 277 2e-73
gb|AAP80691.1| ubiquitin-conjugating enzyme [Griffithsia ja... 277 2e-73
ref|XP_660365.1| UBC1_COLGL Ubiquitin-conjugating enzyme E2... 276 2e-73
gb|AAV34697.1| ubiquitin-conjugating enzyme [Arachis hypogaea] 276 2e-73
emb|CAO21299.1| unnamed protein product [Vitis vinifera] 276 3e-73
ref|XP_001135656.1| PREDICTED: similar to ubiquitin-conjuga... 276 3e-73
ref|NP_565391.1| UBC29 (UBIQUITIN-CONJUGATING ENZYME 29); u... 276 4e-73
ref|XP_461820.1| hypothetical protein DEHA0G06941g [Debaryo... 276 4e-73
gb|AAD00911.1| putative ubiquitin conjugating enzyme [Pinus... 276 5e-73
ref|XP_001429543.1| hypothetical protein GSPATT00032377001 ... 275 6e-73
ref|XP_001388020.1| hypothetical protein PICST_80064 [Pichi... 275 8e-73
ref|XP_001227534.1| ubiquitin-conjugating enzyme E2 [Chaeto... 275 8e-73
gb|AAD55983.1|AF161722_1 ubiquitin-conjugating protein [Mag... 274 9e-73
emb|CAH58635.1| Ubiquitin-conjugating enzyme [Plantago major] 274 1e-72
gb|AAP04430.1| ubiquitin-conjugating enzyme [Hordeum vulgare] 274 1e-72
ref|XP_001249441.1| PREDICTED: similar to Ubiquitin-conjuga... 274 1e-72
ref|XP_445894.1| unnamed protein product [Candida glabrata]... 274 1e-72
ref|XP_001358220.1| GA20341-PA [Drosophila pseudoobscura] >... 274 1e-72
gb|AAN31466.1| ubiquitin-conjugating enzyme [Phytophthora i... 274 2e-72
ref|NP_985031.1| AER173Cp [Ashbya gossypii ATCC 10895] >gi|... 274 2e-72
ref|NP_001062791.1| Os09g0293400 [Oryza sativa (japonica cu... 274 2e-72
ref|XP_001249764.1| PREDICTED: similar to Ubiquitin-conjuga... 274 2e-72
ref|XP_454516.1| unnamed protein product [Kluyveromyces lac... 274 2e-72
ref|XP_414470.2| PREDICTED: similar to Chain A, Nmr Based S... 274 2e-72
ref|XP_001475660.1| PREDICTED: similar to ubiquitin-conjuga... 273 2e-72
ref|XP_001516057.1| PREDICTED: similar to ubiquitin-conjuga... 273 2e-72
ref|XP_001250125.1| PREDICTED: similar to ubiquitin conjuga... 273 3e-72
gb|EEH52091.1| predicted protein [Micromonas pusilla CCMP1545] 273 3e-72
ref|XP_001644513.1| hypothetical protein Kpol_1052p2 [Vande... 273 4e-72
ref|NP_010344.1| Ubiquitin-conjugating enzyme that mediates... 272 5e-72
ref|XP_001485150.1| ubiquitin-conjugating enzyme E2 4 [Pich... 272 7e-72
ref|XP_001725225.1| PREDICTED: similar to Putative ubiquiti... 271 1e-71
ref|XP_571364.1| ubiquitin-conjugating enzyme e2-16 kda [Cr... 271 1e-71
ref|XP_001250193.1| PREDICTED: similar to ubiquitin conjuga... 271 2e-71
gb|EDK98464.1| mCG1038069 [Mus musculus] 270 2e-71
ref|XP_791462.1| PREDICTED: similar to ubiquitin-conjugatin... 270 2e-71
ref|XP_001445732.1| hypothetical protein GSPATT00013765001 ... 270 2e-71
ref|NP_009638.1| Ubiquitin-conjugating enzyme (E2), mediate... 270 2e-71
ref|XP_001422486.1| predicted protein [Ostreococcus lucimar... 270 3e-71
sp|P43102|UBC4_CANAL Ubiquitin-conjugating enzyme E2 4 (Ubi... 269 5e-71
dbj|BAB24239.1| unnamed protein product [Mus musculus] 268 7e-71
gb|ACO66863.1| predicted protein [Micromonas sp. RCC299] 268 7e-71
ref|XP_763468.1| ubiquitin-conjugating enzyme [Theileria pa... 268 7e-71
gb|AAI58913.1| Unknown (protein for IMAGE:7528895) [Xenopus... 268 8e-71
gb|AAW24799.1| SJCHGC00720 protein [Schistosoma japonicum] 268 1e-70
gb|AAP36228.1| Homo sapiens ubiquitin-conjugating enzyme E2... 268 1e-70
ref|NP_003339.1| ubiquitin-conjugating enzyme E2N [Homo sap... 267 1e-70
sp|Q4R4I1|UBE2N_MACFA Ubiquitin-conjugating enzyme E2 N (Ub... 267 2e-70
ref|XP_781361.1| PREDICTED: hypothetical protein [Strongylo... 267 2e-70
ref|NP_446380.1| ubiquitin-conjugating enzyme E2N [Rattus n... 267 2e-70
ref|XP_001609369.1| ubiquitin-conjugating enzyme E2 [Babesi... 266 2e-70
ref|NP_001012828.1| ubiquitin-conjugating enzyme E2N [Gallu... 266 3e-70
ref|XP_001568232.1| ubiquitin-conjugating enzyme E2, putati... 266 3e-70
ref|XP_625662.1| ubiquitin-conjugating enzyme [Cryptosporid... 266 3e-70
ref|XP_843237.1| ubiquitin-conjugating enzyme E2, putative ... 266 3e-70
ref|XP_844774.1| ubiquitin-conjugating enzyme E2, putative ... 266 3e-70
gb|ABQ12946.1| ubiquitin-conjugating enzyme E2N-like [Bos t... 266 5e-70
emb|CAM20851.1| novel protein similar to ubiquitin-conjugat... 266 5e-70
ref|XP_001024315.1| Ubiquitin-conjugating enzyme family pro... 265 6e-70
ref|XP_001255997.1| PREDICTED: similar to Ubiquitin-conjuga... 265 7e-70
ref|XP_775030.1| hypothetical protein CNBF1930 [Cryptococcu... 265 7e-70
pdb|2C2V|B Chain B, Crystal Structure Of The Chip-Ubc13-Uev... 265 9e-70
ref|NP_998651.1| ubiquitin-conjugating enzyme E2N [Danio re... 264 1e-69
gb|AAL67839.1| putative ubiquitin [Pinus pinaster] 264 1e-69
ref|XP_001712182.1| ubc4 [Hemiselmis andersenii] >gi|160331... 264 1e-69
ref|XP_534272.1| PREDICTED: similar to ubiquitin-conjugatin... 264 2e-69
ref|NP_989375.1| ubiquitin-conjugating enzyme E2N (UBC13 ho... 264 2e-69
ref|XP_812602.1| ubiquitin-conjugating enzyme E2, putative ... 264 2e-69
ref|NP_956636.1| ubiquitin-conjugating enzyme E2N-like [Dan... 264 2e-69
ref|XP_534224.2| PREDICTED: similar to ubiquitin-conjugatin... 264 2e-69
ref|XP_001481027.1| PREDICTED: similar to UBE2D3 [Mus muscu... 264 2e-69
gb|AAH48523.1| Predicted gene, EG237009 [Mus musculus] 263 2e-69
gb|EAZ32338.1| hypothetical protein OsJ_015821 [Oryza sativ... 263 3e-69
ref|XP_001713335.1| ubiquitin conjugating enzyme [Guillardi... 263 3e-69
ref|XP_635643.1| hypothetical protein DDBDRAFT_0188947 [Dic... 263 3e-69
gb|ABB55885.1| ubiquitin conjugating enzyme [Hanusia phi] 262 4e-69
gb|ABB55888.1| ubiquitin conjugating enzyme [Proteomonas su... 262 5e-69
gb|ABI14377.1| ubiquitin-conjugating enzyme [Pfiesteria pis... 262 7e-69
ref|XP_001736851.1| ubiquitin-conjugating enzyme E2 D4, put... 262 7e-69
ref|XP_001616514.1| ubiquitin-conjugating enzyme E2 4, puta... 261 8e-69
ref|XP_001019555.1| Ubiquitin-conjugating enzyme family pro... 261 9e-69
gb|ACO63440.1| predicted protein [Micromonas sp. RCC299] 261 9e-69
ref|NP_566332.1| UBC12 (ubiquitin-conjugating enzyme 12); u... 261 1e-68
ref|XP_745172.1| ubiquitin-conjugating enzyme e2 [Plasmodiu... 261 1e-68
ref|XP_001476755.1| PREDICTED: similar to UBE2D3 [Mus muscu... 261 1e-68
ref|XP_652691.1| ubiquitin-conjugating enzyme family protei... 261 2e-68
ref|XP_969360.1| PREDICTED: similar to CG18319-PA [Triboliu... 261 2e-68
ref|NP_001069007.1| ubiquitin-conjugating enzyme E2D 4 (put... 260 2e-68
gb|ABA28997.1| ubiquitin conjugating enzyme 4 [Symbiodinium... 260 2e-68
ref|XP_392901.2| PREDICTED: similar to bendless CG18319-PA ... 260 2e-68
gb|AAB02168.1| ubiquitin conjugating enzyme 260 2e-68
ref|XP_621074.1| PREDICTED: similar to ubiquitin-conjugatin... 260 3e-68
ref|XP_001518541.1| PREDICTED: similar to Chain B, Crystal ... 260 3e-68
ref|NP_001080830.1| ubiquitin-conjugating enzyme E2N [Xenop... 259 3e-68
emb|CAF89770.1| unnamed protein product [Tetraodon nigrovir... 259 4e-68
ref|NP_001040393.1| ubiquitin conjugating enzyme E2 [Bombyx... 259 5e-68
ref|XP_001649243.1| ubiquitin conjugating enzyme, putative ... 258 9e-68
ref|XP_390981.1| UBC1_COLGL Ubiquitin-conjugating enzyme E2... 258 1e-67
ref|XP_001606785.1| PREDICTED: similar to ubiquitin conjuga... 258 1e-67
gb|EEH56703.1| predicted protein [Micromonas pusilla CCMP1545] 258 1e-67
ref|XP_001848064.1| ubiquitin-conjugating enzyme E2-17 kDa ... 257 1e-67
ref|XP_001135653.1| PREDICTED: similar to ubiquitin conjuga... 257 1e-67
gb|ACO15432.1| Ubiquitin-conjugating enzyme E2 N [Caligus c... 257 1e-67
ref|XP_001176445.1| PREDICTED: similar to Ubiquitin-conjuga... 257 2e-67
ref|XP_001745365.1| predicted protein [Monosiga brevicollis... 257 2e-67
gb|ACO14311.1| Ubiquitin-conjugating enzyme E2 N [Esox lucius] 257 2e-67
ref|XP_314098.2| AGAP005197-PA [Anopheles gambiae str. PEST... 256 3e-67
ref|XP_001510479.1| PREDICTED: similar to Chain B, Crystal ... 256 3e-67
ref|XP_001254901.1| PREDICTED: similar to Ubiquitin-conjuga... 256 4e-67
ref|XP_001105664.1| PREDICTED: similar to ubiquitin-conjuga... 256 4e-67
ref|NP_511150.1| bendless CG18319-PA [Drosophila melanogast... 256 4e-67
ref|XP_001623427.1| predicted protein [Nematostella vectens... 256 4e-67
ref|XP_001897862.1| ubiquitin conjugating enzyme protein 13... 256 5e-67
ref|XP_001395006.1| hypothetical protein An11g10490 [Asperg... 255 7e-67
ref|XP_001182414.1| PREDICTED: similar to ubiquitin-conjuga... 254 1e-66
ref|XP_001363605.1| PREDICTED: similar to ubiquitin-conjuga... 254 1e-66
ref|XP_001094543.1| PREDICTED: similar to ubiquitin-conjuga... 254 1e-66
ref|XP_001316746.1| ubiquitin conjugating enzyme, putative ... 254 2e-66
emb|CAO44055.1| unnamed protein product [Vitis vinifera] 254 2e-66
ref|XP_509265.2| PREDICTED: similar to ubiquitin-conjugatin... 253 3e-66
ref|XP_001163828.1| PREDICTED: ubiquitin-conjugating enzyme... 253 3e-66
ref|XP_001778399.1| predicted protein [Physcomitrella paten... 252 4e-66
ref|XP_536365.1| PREDICTED: similar to ubiquitin-conjugatin... 252 4e-66
ref|XP_890535.1| PREDICTED: similar to ubiquitin-conjugatin... 252 5e-66
gb|ABK93888.1| unknown [Populus trichocarpa] >gi|118487650|... 252 5e-66
ref|NP_001088048.1| hypothetical protein LOC494742 [Xenopus... 252 6e-66
ref|XP_001764104.1| predicted protein [Physcomitrella paten... 252 6e-66
gb|AAH79134.1| Ube2e2 protein [Rattus norvegicus] 252 7e-66
ref|XP_851403.1| PREDICTED: similar to ubiquitin-conjugatin... 252 7e-66
ref|XP_853730.1| PREDICTED: similar to ubiquitin-conjugatin... 252 8e-66
gb|ABK24341.1| unknown [Picea sitchensis] >gi|116791120|gb|... 251 8e-66
ref|NP_001088106.1| hypothetical protein LOC494805 [Xenopus... 251 8e-66
ref|XP_001251968.1| PREDICTED: similar to UB2E2 [Bos taurus] 251 8e-66
ref|XP_001495424.1| PREDICTED: similar to ubiquitin-conjuga... 251 9e-66
ref|NP_001072140.1| UB2E2 [Sus scrofa] >gi|115371731|gb|ABI... 251 1e-65
ref|NP_689866.1| ubiquitin-conjugating enzyme E2E 2 (UBC4/5... 251 1e-65
ref|XP_001897800.1| Ubiquitin conjugating enzyme protein 13... 251 1e-65
ref|NP_568476.1| PEX4 (PEROXIN4); ubiquitin-protein ligase ... 251 1e-65
emb|CAO39390.1| unnamed protein product [Vitis vinifera] 251 1e-65
ref|NP_659088.1| ubiquitin-conjugating enzyme E2E 2 (UBC4/5... 251 1e-65
ref|XP_854681.1| PREDICTED: similar to ubiquitin-conjugatin... 251 1e-65
ref|XP_001798158.1| hypothetical protein SNOG_07831 [Phaeos... 251 2e-65
ref|NP_001047515.1| Os02g0634800 [Oryza sativa (japonica cu... 251 2e-65
gb|ABK93279.1| unknown [Populus trichocarpa] >gi|118483536|... 251 2e-65
ref|XP_001509467.1| PREDICTED: similar to LOC494742 protein... 251 2e-65
ref|XP_001701577.1| predicted protein [Chlamydomonas reinha... 251 2e-65
gb|ABK94752.1| unknown [Populus trichocarpa] 251 2e-65
ref|XP_001173077.1| PREDICTED: similar to Ube2e2 protein [P... 250 2e-65
emb|CAG03424.1| unnamed protein product [Tetraodon nigrovir... 250 2e-65
gb|AAZ20286.1| ubiquitin-conjugating enzyme 1 [Arachis hypo... 250 2e-65
ref|XP_001369756.1| PREDICTED: similar to LOC494742 protein... 250 2e-65
gb|AAH99169.1| Ube2e2 protein [Rattus norvegicus] 250 2e-65
ref|NP_609715.1| CG3473 CG3473-PA [Drosophila melanogaster]... 250 2e-65
gb|ABK22122.1| unknown [Picea sitchensis] 250 2e-65
dbj|BAE88099.1| unnamed protein product [Macaca fascicularis] 250 2e-65
ref|NP_989032.1| ubiquitin-conjugating enzyme E2E 1 (UBC4/5... 250 2e-65
ref|NP_564011.1| UBC13B/UBC36 (UBIQUITIN-CONJUGATING ENZYME... 250 3e-65
Sequences not found previously or not previously below threshold:
>pdb|2OXQ|A Chain A, Structure Of The Ubch5 :chip U-Box Complex
pdb|2OXQ|B Chain B, Structure Of The Ubch5 :chip U-Box Complex
Length = 152
Score = 294 bits (755), Expect = 9e-79, Method: Composition-based stats.
Identities = 63/152 (41%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE +++QR+ A + DD +F W A I GPS++PY+GGVF L P
Sbjct: 5 SMALKRIQKELQDLQRDPPAQCSAGPVGDD--LFHWQATIMGPSDSPYQGGVFFLTIHFP 62
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 63 TDYPFKPPKVAFTTKIYHPNINS-NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPD 121
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D ++ +S D +N +A+ +T+ AM
Sbjct: 122 DPLVPDIAHIYKS-DKEKYNRLAREWTQKYAM 152
>gb|EAZ12964.1| hypothetical protein OsJ_002789 [Oryza sativa (japonica
cultivar-group)]
Length = 430
Score = 293 bits (751), Expect = 3e-78, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GPS++PY GGVF + P
Sbjct: 229 MASKRIQKELKDLQKDPPTSCSAGPVGED--MFHWQATIMGPSDSPYAGGVFLVTIHFPP 286
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK+ WSPA T+ V +I +L+ P PD
Sbjct: 287 DYPFKPPKVAFRTKVFHPNINS-NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDD 345
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTR 149
PL + ++ ++ D + + A+ +T+
Sbjct: 346 PLVPEIAHMYKT-DRHKYENTARTWTQ 371
>ref|NP_955958.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) [Danio
rerio]
gb|AAH59465.1| Ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) [Danio
rerio]
Length = 147
Score = 292 bits (748), Expect = 7e-78, Method: Composition-based stats.
Identities = 63/151 (41%), Positives = 93/151 (61%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++QR+ A + DD +F W A I GPS++PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLQRDPPAQCSAGPVGDD--LFHWQATIMGPSDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNINS-NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D ++ +S D +N +A+ +T+ AM
Sbjct: 118 PLVPDIAHIYKS-DKEKYNRLAREWTQKYAM 147
>pdb|2ESK|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b, Wild-Type
Length = 149
Score = 291 bits (747), Expect = 8e-78, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 2 AMALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFP 59
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 60 TDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD 118
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 119 DPLVPEIARIYKT-DREKYNRIAREWTQKYAM 149
>ref|NP_567791.1| UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase
[Arabidopsis thaliana]
gb|AAY44849.1| ubiquitinating enzyme [Arabidopsis thaliana]
Length = 178
Score = 291 bits (745), Expect = 1e-77, Method: Composition-based stats.
Identities = 59/154 (38%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
++ + R+ KE K++Q++ + +D +F W A I GPS++PY GGVF +
Sbjct: 29 LEMASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHF 86
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P P
Sbjct: 87 PPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 145
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
D PL + ++ ++ D + S A+ +T+ AM
Sbjct: 146 DDPLVPEIAHMYKT-DKNKYESTARTWTQKYAMG 178
>pdb|1Z2U|A Chain A, The 1.1a Crystallographic Structure Of Ubiquitin-
Conjugating Enzyme (Ubc-2) From Caenorhabditis Elegans:
Functional And Evolutionary Significance
Length = 150
Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP E+PY+GGVF L P
Sbjct: 4 MALKRIQKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPT 61
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 62 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 120
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 121 PLVPEIARIYKT-DRERYNQLAREWTQKYAM 150
>gb|AAG40371.1|AF325019_1 AT4g27960 [Arabidopsis thaliana]
Length = 178
Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats.
Identities = 59/154 (38%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Query: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60
++ + R+ KE K++Q++ + +D +F W A I GPS++PY GGVF +
Sbjct: 29 LEMASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHF 86
Query: 61 PEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEP 120
P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P P
Sbjct: 87 PPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 145
Query: 121 DSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
D PL + ++ ++ D + S A+ +T+ AM
Sbjct: 146 DDPLVPEIAHMYKT-DKNKYESTARTWTQKYAMG 178
>ref|XP_001120139.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2-17 kDa
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(Protein effete) [Apis mellifera]
Length = 147
Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP ++PY+GGVF L P
Sbjct: 1 MALKRINKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + L ++ D +N +A+ +TR AM
Sbjct: 118 PLVPEIARLYKT-DREKYNELAREWTRKYAM 147
>pdb|2C4O|B Chain B, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
pdb|2C4O|C Chain C, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
pdb|2C4O|D Chain D, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
pdb|2CLW|B Chain B, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
pdb|2CLW|C Chain C, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
pdb|2CLW|D Chain D, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5b
Length = 165
Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 18 SMALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFP 75
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 76 TDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD 134
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 135 DPLVPEIARIYKT-DREKYNRIAREWTQKYAM 165
>ref|NP_731941.1| effete CG7425-PA [Drosophila melanogaster]
ref|NP_001119686.1| effete [Acyrthosiphon pisum]
ref|XP_310998.2| AGAP000145-PA [Anopheles gambiae str. PEST]
ref|XP_970430.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2-17 kDa
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(Effete protein) [Tribolium castaneum]
ref|XP_001605481.1| PREDICTED: similar to ubiquitin-conjugating enzyme [Nasonia
vitripennis]
ref|XP_001663154.1| ubiquitin-conjugating enzyme E2 [Aedes aegypti]
sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa (Ubiquitin-protein ligase)
(Ubiquitin carrier protein) (Protein effete)
emb|CAA44453.1| ubiquitin-conjugating enzyme [Drosophila melanogaster]
gb|AAF55093.1| CG7425-PA [Drosophila melanogaster]
gb|AAL25343.1| GH14739p [Drosophila melanogaster]
gb|AAT01083.1| putative ubiquitin-conjugating enzyme [Homalodisca coagulata]
gb|EAA06420.3| AGAP000145-PA [Anopheles gambiae str. PEST]
gb|ABD72686.1| putative ubiquitin-conjugating enzyme [Acyrthosiphon pisum]
gb|ABF18325.1| ubiquitin-conjugating enzyme [Aedes aegypti]
gb|EAT45631.1| ubiquitin-conjugating enzyme E2 [Aedes aegypti]
Length = 147
Score = 289 bits (742), Expect = 3e-77, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP ++PY+GGVF L P
Sbjct: 1 MALKRINKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +TR AM
Sbjct: 118 PLVPEIARIYKT-DREKYNELAREWTRKYAM 147
>ref|NP_502065.1| LEThal family member (let-70) [Caenorhabditis elegans]
ref|XP_001670339.1| Hypothetical protein CBG06002 [Caenorhabditis briggsae AF16]
ref|XP_001899392.1| ubiquitin-conjugating enzyme ubc-2 [Brugia malayi]
sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 (Ubiquitin-protein ligase 2)
(Ubiquitin carrier protein 2) (Lethal protein 70)
emb|CAA92745.1| Hypothetical protein M7.1 [Caenorhabditis elegans]
gb|AAB25489.2| ubiquitin-conjugating enzyme [Caenorhabditis elegans]
gb|EDP32200.1| ubiquitin-conjugating enzyme ubc-2, putative [Brugia malayi]
emb|CAP26360.1| C. briggsae CBR-LET-70 protein [Caenorhabditis briggsae]
Length = 147
Score = 289 bits (742), Expect = 3e-77, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP E+PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DRERYNQLAREWTQKYAM 147
>ref|NP_001072891.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog) [Xenopus
tropicalis]
ref|NP_001086505.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Xenopus
laevis]
ref|NP_001088511.1| hypothetical protein LOC495381 [Xenopus laevis]
gb|AAH76728.1| Ube2d2-prov protein [Xenopus laevis]
gb|AAH84849.1| LOC495381 protein [Xenopus laevis]
gb|AAI25771.1| Ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog) [Xenopus
tropicalis]
Length = 147
Score = 289 bits (741), Expect = 4e-77, Method: Composition-based stats.
Identities = 62/151 (41%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++QR+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIQKELNDLQRDPPAQCSAGPVGDD--LFHWQATIMGPTDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNINS-NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D + +S D +N +A+ +T+ AM
Sbjct: 118 PLVPDIAQIYKS-DKEKYNRLAREWTQKYAM 147
>ref|NP_057067.1| ubiquitin-conjugating enzyme E2D 4 (putative) [Homo sapiens]
ref|XP_001096263.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 4 (putative)
[Macaca mulatta]
ref|XP_001135740.1| PREDICTED: ubiquitin-conjugating enzyme E2D 4 (putative) isoform 3
[Pan troglodytes]
ref|XP_519070.2| PREDICTED: ubiquitin-conjugating enzyme E2D 4 (putative) isoform 4
[Pan troglodytes]
sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 (Ubiquitin-protein ligase D4)
(Ubiquitin carrier protein D4) (HBUCE1)
gb|AAD31180.1|AF125044_1 ubiquitin-conjugating enzyme HBUCE1 [Homo sapiens]
dbj|BAA91697.1| unnamed protein product [Homo sapiens]
gb|AAH04104.1| Ubiquitin-conjugating enzyme E2D 4 (putative) [Homo sapiens]
gb|EAL24010.1| ubiquitin-conjugating enzyme HBUCE1 [Homo sapiens]
gb|EAW94182.1| ubiquitin-conjugating enzyme E2D 4 (putative), isoform CRA_e [Homo
sapiens]
gb|EAW94184.1| ubiquitin-conjugating enzyme E2D 4 (putative), isoform CRA_e [Homo
sapiens]
Length = 147
Score = 289 bits (741), Expect = 4e-77, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++QR+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIQKELTDLQRDPPAQCSAGPVGDD--LFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNINS-NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIAHTYKA-DREKYNRLAREWTQKYAM 147
>ref|NP_957253.1| ubiquitin-conjugating enzyme E2D 3 [Danio rerio]
gb|AAH48896.1| Zgc:55886 protein [Danio rerio]
gb|AAH65678.1| Zgc:55886 [Danio rerio]
gb|AAI64949.1| Zgc:55886 protein [synthetic construct]
Length = 147
Score = 289 bits (741), Expect = 4e-77, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIHKELHDLGRDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DREKYNRIAREWTQKYAM 147
>ref|NP_003330.1| ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sapiens]
ref|NP_064296.1| ubiquitin-conjugating enzyme E2D 2 [Mus musculus]
ref|NP_001016064.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog) [Xenopus
tropicalis]
ref|NP_001032369.1| ubiquitin-conjugating enzyme E2D 2 [Rattus norvegicus]
ref|NP_001039961.1| ubiquitin-conjugating enzyme E2D 2 [Bos taurus]
ref|NP_001084434.1| ubiquitin conjugating enzyme E2 [Xenopus laevis]
ref|XP_517968.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 5 [Pan
troglodytes]
ref|XP_848325.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2
(Ubiquitin-protein ligase D2) (Ubiquitin carrier protein
D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB
2) isoform 1 [Canis familiaris]
ref|XP_855896.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2
(Ubiquitin-protein ligase D2) (Ubiquitin carrier protein
D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB
2) isoform 3 [Canis familiaris]
ref|XP_855942.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2
(Ubiquitin-protein ligase D2) (Ubiquitin carrier protein
D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB
2) isoform 4 [Canis familiaris]
ref|XP_855983.1| PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2
(Ubiquitin-protein ligase D2) (Ubiquitin carrier protein
D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB
2) isoform 5 [Canis familiaris]
ref|XP_001476589.1| PREDICTED: similar to Chain B, Crystal Structure Of Human
Ubiquitin-Conjugating Enzyme Ubch5b [Mus musculus]
sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2)
(Ubiquitin carrier protein D2) (Ubiquitin-conjugating
enzyme E2-17 kDa 2) (E2(17)KB 2)
sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2)
(Ubiquitin carrier protein D2) (Ubiquitin-conjugating
enzyme E2-17 kDa 2) (E2(17)KB 2)
sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2)
(Ubiquitin carrier protein D2) (Ubiquitin-conjugating
enzyme E2-17 kDa 2) (E2(17)KB 2)
sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2)
(Ubiquitin carrier protein D2) (Xubc4)
sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2)
(Ubiquitin carrier protein D2)
pdb|1UR6|A Chain A, Nmr Based Structural Model Of The Ubch5b-Cnot4 Complex
pdb|1W4U|A Chain A, Nmr Solution Structure Of The Ubiquitin Conjugating Enzyme
Ubch5b
gb|AAA85101.1| ubiquitin conjugating enzyme
gb|AAA91460.1| UbcH5B
gb|AAB05772.1| ubiquitin conjugating enzyme
gb|AAH03923.1| Ube2d2 protein [Mus musculus]
dbj|BAD06215.1| ubiquitin conjugating enzyme E2 [Xenopus laevis]
gb|AAH84359.1| Xubc4 protein [Xenopus laevis]
gb|AAH33349.1| Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Homo
sapiens]
gb|AAX35690.1| ubiquitin-conjugating enzyme E2 D2 transcript variant 1 [Homo
sapiens]
dbj|BAE35877.1| unnamed protein product [Mus musculus]
dbj|BAE24085.1| unnamed protein product [Mus musculus]
dbj|BAE36719.1| unnamed protein product [Mus musculus]
dbj|BAE28338.1| unnamed protein product [Mus musculus]
dbj|BAE22869.1| unnamed protein product [Mus musculus]
emb|CAJ81618.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Xenopus
tropicalis]
gb|AAI14655.1| Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Bos
taurus]
gb|EAW62095.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), isoform
CRA_a [Homo sapiens]
gb|EAW62096.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), isoform
CRA_a [Homo sapiens]
gb|EDK97145.1| mCG121966 [Mus musculus]
gb|EDL76278.1| ubc2e ubiquitin conjugating enzyme, isoform CRA_a [Rattus
norvegicus]
Length = 147
Score = 289 bits (740), Expect = 5e-77, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DREKYNRIAREWTQKYAM 147
>pdb|2ESQ|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Mutant
Ser94gly
Length = 149
Score = 289 bits (740), Expect = 5e-77, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 2 AMALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFP 59
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F T+I+HPN++ G ICLDIL++ W PA T+ V +I +L+ P PD
Sbjct: 60 TDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWGPALTISKVLLSICSLLCDPNPD 118
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 119 DPLVPEIARIYKT-DREKYNRIAREWTQKYAM 149
>emb|CAJ57642.1| putative ubiquitin conjugating enzyme 2 [Oesophagostomum dentatum]
Length = 147
Score = 289 bits (740), Expect = 6e-77, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP E+PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DRDRYNQLAREWTQKYAM 147
>pdb|2ESO|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Mutant
Ile37ala
Length = 149
Score = 288 bits (739), Expect = 7e-77, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++ R+ A + DD +F W A GP+++PY+GGVF L P
Sbjct: 2 AMALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATAMGPNDSPYQGGVFFLTIHFP 59
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 60 TDYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPD 118
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 119 DPLVPEIARIYKT-DREKYNRIAREWTQKYAM 149
>ref|NP_001082922.1| hypothetical protein LOC100001914 [Danio rerio]
gb|AAI39560.1| Zgc:162263 protein [Danio rerio]
Length = 147
Score = 288 bits (738), Expect = 8e-77, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++QR+ A + +D +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIQKELTDLQRDPPAQCSAGPVGED--LFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNINS-NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIAHTYKA-DREKYNRLAREWTQKYAM 147
>pdb|2ESP|A Chain A, Human Ubiquitin-Conjugating Enzyme (E2) Ubch5b Mutant
Ile88ala
Length = 149
Score = 288 bits (738), Expect = 8e-77, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 2 AMALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFP 59
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP+V F T+I+HPN++ G ICLD L++ WSPA T+ V +I +L+ P PD
Sbjct: 60 TDYPFKPPKVAFTTRIYHPNINS-NGSICLDALRSQWSPALTISKVLLSICSLLCDPNPD 118
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 119 DPLVPEIARIYKT-DREKYNRIAREWTQKYAM 149
>gb|EAY75244.1| hypothetical protein OsI_003091 [Oryza sativa (indica
cultivar-group)]
Length = 371
Score = 288 bits (738), Expect = 8e-77, Method: Composition-based stats.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GPS++PY GGVF + P
Sbjct: 225 MASKRIQKELKDLQKDPPTSCSAGPVGED--MFHWQATIMGPSDSPYAGGVFLVTIHFPP 282
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK+ WSPA T+ V +I +L+ P PD
Sbjct: 283 DYPFKPPKVAFRTKVFHPNINS-NGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDD 341
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTR 149
PL + ++ ++ D + + A+ +T+
Sbjct: 342 PLVPEIAHMYKT-DRHKYENTARTWTQ 367
>ref|NP_871621.1| ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo sapiens]
dbj|BAC04632.1| unnamed protein product [Homo sapiens]
gb|EDL82262.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_b [Rattus norvegicus]
Length = 148
Score = 288 bits (737), Expect = 1e-76, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T AM
Sbjct: 118 PLVPEIARIYKT-DRDKYNRLAREWTEKYAM 147
>ref|NP_957404.1| hypothetical protein LOC394085 [Danio rerio]
gb|AAH55599.1| Zgc:66323 [Danio rerio]
Length = 147
Score = 288 bits (737), Expect = 1e-76, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++QR+ + + +D +F W A I GP ++PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLQRDPPSQCSAGPLGED--LFHWQATIMGPGDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNINS-NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D ++ +S D +N +A+ +T+ AM
Sbjct: 118 PLVPDIAHIYKS-DKDKYNRLAREWTQKYAM 147
>gb|AAC41750.1| ubiquitin conjugating enzyme
prf||2111484A ubiquitin-conjugating enzyme
Length = 147
Score = 287 bits (736), Expect = 1e-76, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYQT-DREKYNRIAREWTQKYAM 147
>ref|XP_001893776.1| ubiquitin-conjugating enzyme E2-17 kDa [Brugia malayi]
gb|EDP37374.1| ubiquitin-conjugating enzyme E2-17 kDa, putative [Brugia malayi]
Length = 147
Score = 287 bits (736), Expect = 1e-76, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP E+PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+++HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRMYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARVYKT-DRDRYNQLAREWTQKYAM 147
>ref|NP_001093355.1| hypothetical protein LOC100101299 [Xenopus laevis]
gb|AAI42570.1| LOC100101299 protein [Xenopus laevis]
gb|ABV25624.1| ubiquitin conjugating enzyme E2 [Xenopus laevis]
Length = 147
Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++QR+ A + +D +F W A I GP+++P++GGVF L P
Sbjct: 1 MALKRIQKELMDLQRDPPAQCSAGPVGED--LFHWQATIMGPNDSPFQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTKIYHPNINS-NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIAHTYKA-DREKYNRLAREWTQKYAM 147
>ref|XP_001699308.1| ubiquitin conjugating enzyme [Chlamydomonas reinhardtii]
gb|EDO98738.1| ubiquitin conjugating enzyme [Chlamydomonas reinhardtii]
Length = 148
Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats.
Identities = 60/152 (39%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++Q++ DD +F W A I GPS++PY GGVF + P
Sbjct: 1 MASKRIQKELQDLQKDPPTSCSAGPAGDD--LFHWQATIMGPSDSPYAGGVFFVNIMFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK++HPNV+ + G ICLDILK+ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVTFQTKVYHPNVNSQ-GSICLDILKDQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D R + A+ +TR AM
Sbjct: 118 PLVPEIAHIYKT-DRRRYEETAREWTRKYAMG 148
>gb|EAZ08485.1| hypothetical protein OsI_029717 [Oryza sativa (indica
cultivar-group)]
Length = 284
Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats.
Identities = 56/155 (36%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++++ +D +F W A I GPS++PY GGVF + P
Sbjct: 1 MASKRIQKELMDLRKDPPTSCSAGPAGED--LFHWQATIMGPSDSPYAGGVFFVNIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK++HPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVNFQTKVYHPNINS-NGSICLDILKEQWSPALTISKVLLSISSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMPKKG 157
PL + ++ +S + A+ +T+ AM G
Sbjct: 118 PLVPEIAHVYKSQ-RPRYEETARAWTQKYAMESTG 151
>ref|XP_001764055.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ71194.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 148
Score = 287 bits (735), Expect = 2e-76, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GP ++PY GGVF + P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPPDSPYAGGVFLVTIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + + S A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRQKYESTARSWTQKYAMG 148
>gb|ACO13579.1| Ubiquitin-conjugating enzyme E2 D2 [Esox lucius]
Length = 147
Score = 286 bits (734), Expect = 2e-76, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL+ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRLQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DREKYNRIAREWTQKYAM 147
>ref|NP_003331.1| ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sapiens]
ref|NP_079632.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) [Mus
musculus]
ref|NP_112516.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) [Rattus
norvegicus]
ref|NP_871615.1| ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sapiens]
ref|NP_871616.1| ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sapiens]
ref|NP_871617.1| ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sapiens]
ref|NP_871618.1| ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sapiens]
ref|NP_871619.1| ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sapiens]
ref|NP_871620.1| ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo sapiens]
ref|NP_001026324.1| ubiquitin-conjugating enzyme E2D 3 [Gallus gallus]
ref|XP_001109515.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5
homolog, yeast) isoform 1 [Macaca mulatta]
ref|XP_001109666.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5
homolog, yeast) isoform 2 [Macaca mulatta]
ref|XP_001109707.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5
homolog, yeast) isoform 3 [Macaca mulatta]
ref|XP_001109761.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5
homolog, yeast) isoform 4 [Macaca mulatta]
ref|XP_001109811.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5
homolog, yeast) isoform 5 [Macaca mulatta]
ref|XP_001109852.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5
homolog, yeast) isoform 6 [Macaca mulatta]
ref|XP_001109897.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5
homolog, yeast) isoform 7 [Macaca mulatta]
ref|XP_001109946.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5
homolog, yeast) isoform 8 [Macaca mulatta]
ref|XP_001109986.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5
homolog, yeast) isoform 9 [Macaca mulatta]
ref|XP_001110035.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 3 (UBC4/5
homolog, yeast) isoform 10 [Macaca mulatta]
ref|XP_001169326.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 2 [Pan
troglodytes]
ref|XP_001169347.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 3 [Pan
troglodytes]
ref|XP_001169374.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 4 [Pan
troglodytes]
ref|XP_001169389.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 5 [Pan
troglodytes]
ref|XP_001169415.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 6 [Pan
troglodytes]
ref|XP_001169433.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 7 [Pan
troglodytes]
ref|XP_001169457.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 8 [Pan
troglodytes]
ref|XP_001169483.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 9 [Pan
troglodytes]
ref|XP_001169504.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 10 [Pan
troglodytes]
ref|XP_001169529.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 11 [Pan
troglodytes]
ref|XP_001169546.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 12 [Pan
troglodytes]
ref|XP_001169579.1| PREDICTED: similar to ubiquitin conjugating enzyme isoform 13 [Pan
troglodytes]
sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 (Ubiquitin-protein ligase D3)
(Ubiquitin carrier protein D3) (Ubiquitin-conjugating
enzyme E2-17 kDa 3) (E2(17)KB 3)
sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 (Ubiquitin-protein ligase D3)
(Ubiquitin carrier protein D3) (Ubiquitin-conjugating
enzyme E2-17 kDa 3) (E2(17)KB 3) (Phosphoarginine
phosphatase) (PAPase)
sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 (Ubiquitin-protein ligase D3)
(Ubiquitin carrier protein D3) (Ubiquitin-conjugating
enzyme E2-17 kDa 3) (E2(17)KB 3)
sp|Q5R4V7|UB2D3_PONPY Ubiquitin-conjugating enzyme E2 D3 (Ubiquitin-protein ligase D3)
(Ubiquitin carrier protein D3)
sp|Q4R5N4|UB2D3_MACFA Ubiquitin-conjugating enzyme E2 D3 (Ubiquitin-protein ligase D3)
(Ubiquitin carrier protein D3)
gb|AAA85100.1| ubiquitin conjugating enzyme
gb|AAA85102.1| ubiquitin conjugating enzyme
gb|AAA91461.1| UbcH5C
dbj|BAA87330.1| phosphoarginine phosphatase [Rattus norvegicus]
gb|AAF35234.1| ubiquitin-conjugating enzyme E2D 3 [Homo sapiens]
dbj|BAB23116.1| unnamed protein product [Mus musculus]
gb|AAH03395.1| Ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) [Homo
sapiens]
gb|AAH37894.1| Ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) [Homo
sapiens]
dbj|BAC28070.1| unnamed protein product [Mus musculus]
dbj|BAC33981.1| unnamed protein product [Mus musculus]
dbj|BAC36940.1| unnamed protein product [Mus musculus]
dbj|BAC40357.1| unnamed protein product [Mus musculus]
gb|AAH57941.1| Ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) [Mus
musculus]
gb|AAH72696.1| Ube2d3 protein [Rattus norvegicus]
emb|CAG31534.1| hypothetical protein [Gallus gallus]
emb|CAH93209.1| hypothetical protein [Pongo abelii]
gb|AAH98220.1| Ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) [Mus
musculus]
dbj|BAE01591.1| unnamed protein product [Macaca fascicularis]
dbj|BAE40955.1| unnamed protein product [Mus musculus]
dbj|BAE31721.1| unnamed protein product [Mus musculus]
dbj|BAE31728.1| unnamed protein product [Mus musculus]
dbj|BAE34839.1| unnamed protein product [Mus musculus]
dbj|BAE39237.1| unnamed protein product [Mus musculus]
dbj|BAE39283.1| unnamed protein product [Mus musculus]
dbj|BAE30279.1| unnamed protein product [Mus musculus]
dbj|BAE30534.1| unnamed protein product [Mus musculus]
dbj|BAE35172.1| unnamed protein product [Mus musculus]
dbj|BAE39701.1| unnamed protein product [Mus musculus]
dbj|BAE39829.1| unnamed protein product [Mus musculus]
dbj|BAE35518.1| unnamed protein product [Mus musculus]
dbj|BAE31296.1| unnamed protein product [Mus musculus]
dbj|BAE38093.1| unnamed protein product [Mus musculus]
gb|EAX06138.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_a [Homo sapiens]
gb|EAX06139.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_a [Homo sapiens]
gb|EAX06141.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_a [Homo sapiens]
gb|EAX06142.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_a [Homo sapiens]
gb|EAX06144.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_a [Homo sapiens]
gb|EAX06145.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_a [Homo sapiens]
gb|EDL12149.1| mCG22362, isoform CRA_a [Mus musculus]
gb|EDL12150.1| mCG22362, isoform CRA_a [Mus musculus]
gb|EDL12151.1| mCG22362, isoform CRA_a [Mus musculus]
gb|EDL12152.1| mCG22362, isoform CRA_a [Mus musculus]
gb|EDL12153.1| mCG22362, isoform CRA_a [Mus musculus]
gb|EDL82261.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_a [Rattus norvegicus]
gb|EDL82263.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_a [Rattus norvegicus]
gb|EDL82264.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_a [Rattus norvegicus]
gb|EDL82265.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_a [Rattus norvegicus]
gb|EDL82266.1| ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast), isoform
CRA_a [Rattus norvegicus]
Length = 147
Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +++ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DRDKYNRISREWTQKYAM 147
>pdb|1X23|A Chain A, Crystal Structure Of Ubch5c
pdb|1X23|B Chain B, Crystal Structure Of Ubch5c
pdb|1X23|C Chain C, Crystal Structure Of Ubch5c
pdb|1X23|D Chain D, Crystal Structure Of Ubch5c
Length = 155
Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 9 MALKRINKELSDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 66
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 67 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 125
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +++ +T+ AM
Sbjct: 126 PLVPEIARIYKT-DRDKYNRISREWTQKYAM 155
>ref|NP_001054191.1| Os04g0667800 [Oryza sativa (japonica cultivar-group)]
emb|CAE02801.1| OSJNBa0043A12.6 [Oryza sativa (japonica cultivar-group)]
emb|CAH68307.1| B0811B10.8 [Oryza sativa (indica cultivar-group)]
dbj|BAF16105.1| Os04g0667800 [Oryza sativa (japonica cultivar-group)]
emb|CAH66000.1| H1005F08.29 [Oryza sativa (indica cultivar-group)]
gb|EAY95969.1| hypothetical protein OsI_017202 [Oryza sativa (indica
cultivar-group)]
Length = 148
Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GPS++P+ GGVF + P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVGED--MFHWQATIMGPSDSPFAGGVFLVNIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVSFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + S A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRAKYESTARSWTQKYAMG 148
>ref|NP_564828.1| UBC28; ubiquitin-protein ligase [Arabidopsis thaliana]
ref|NP_001031228.1| UBC28; ubiquitin-protein ligase [Arabidopsis thaliana]
gb|AAK60309.1|AF385718_1 At1g64230/F22C12_17 [Arabidopsis thaliana]
gb|AAM11574.1|AF480945_1 ubiquitin conjugating enzyme UBC9A [Arabidopsis thaliana]
gb|AAM91500.1| At1g64230/F22C12_17 [Arabidopsis thaliana]
gb|AAY44867.1| ubiquitinating enzyme [Arabidopsis thaliana]
Length = 148
Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats.
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GPS++PY GGVF + P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYSGGVFLVTIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPNV+ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + S A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRAKYESTARSWTQKYAMG 148
>ref|NP_001072141.1| UB2D2 [Sus scrofa]
sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2)
(Ubiquitin carrier protein D2)
gb|ABI96191.1| UB2D2 [Sus scrofa]
Length = 147
Score = 286 bits (733), Expect = 3e-76, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIHKELNDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +++ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DRDKYNRISREWTQKYAM 147
>ref|XP_001758801.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ76307.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 148
Score = 286 bits (732), Expect = 4e-76, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GP ++PY GGVF + P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPPDSPYAGGVFLVTIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + + + A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRQKYEATARSWTQKYAMG 148
>emb|CAJ57641.1| putative ubiquitin conjugating enzyme 2 [Oesophagostomum dentatum]
Length = 147
Score = 286 bits (732), Expect = 4e-76, Method: Composition-based stats.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP E+PY+GGVF L P
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTTSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DRDRYNQLAREWTQKYAM 147
>emb|CAN77946.1| hypothetical protein [Vitis vinifera]
emb|CAO45195.1| unnamed protein product [Vitis vinifera]
Length = 148
Score = 286 bits (732), Expect = 4e-76, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + DD +F W A I GPS++P+ GGVF ++ P
Sbjct: 1 MASKRINKELKDLQKDPPTSCSAGPVGDD--MFHWQATIMGPSDSPFAGGVFLVSIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVSFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + + A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRAKYETTARSWTQKYAMG 148
>ref|XP_001367781.1| PREDICTED: similar to ubiquitin conjugating enzyme [Monodelphis
domestica]
Length = 147
Score = 286 bits (732), Expect = 5e-76, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA TL V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTLSKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +++ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DRDKYNRISREWTQKYAM 147
>ref|XP_001764546.1| predicted protein [Physcomitrella patens subsp. patens]
ref|XP_001764637.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ70528.1| predicted protein [Physcomitrella patens subsp. patens]
gb|EDQ70619.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 148
Score = 286 bits (732), Expect = 5e-76, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GP ++PY GGVF + P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPPDSPYAGGVFLVTIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + S A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRHKYESTARSWTQKYAMG 148
>gb|EAZ01104.1| hypothetical protein OsI_022336 [Oryza sativa (indica
cultivar-group)]
gb|EAZ37148.1| hypothetical protein OsJ_020631 [Oryza sativa (japonica
cultivar-group)]
Length = 148
Score = 285 bits (731), Expect = 5e-76, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GP+++PY GGVF ++ P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVGED--MFHWQATIMGPADSPYAGGVFLVSIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFKTKVFHPNINS-NGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + S A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRAKYESTARGWTQKYAMG 148
>dbj|BAB22614.1| unnamed protein product [Mus musculus]
Length = 147
Score = 285 bits (731), Expect = 6e-76, Method: Composition-based stats.
Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + D +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDG--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +++ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DRDKYNRISREWTQKYAM 147
>ref|XP_001080152.1| PREDICTED: similar to ubiquitin-conjugating enzyme E2D 1, UBC4/5
homolog [Rattus norvegicus]
Length = 384
Score = 285 bits (731), Expect = 6e-76, Method: Composition-based stats.
Identities = 60/149 (40%), Positives = 87/149 (58%), Gaps = 4/149 (2%)
Query: 5 RARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPY 64
R+ KE ++QR+ A + DD +F W A I GP ++ Y+GGVF L P Y
Sbjct: 240 LKRIQKELSDLQRDPPAHCSAGPVGDD--LFHWQATIMGPPDSAYQGGVFFLTVHFPTDY 297
Query: 65 PLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPL 124
P +PP++ F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD PL
Sbjct: 298 PFKPPKIAFTTKIYHPNINS-NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPL 356
Query: 125 NCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
D + +S D +N A+ +T+ AM
Sbjct: 357 VPDIAQIYKS-DKEKYNRHAREWTQKYAM 384
>ref|NP_956246.1| ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Danio
rerio]
gb|AAH59548.1| Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Danio
rerio]
gb|AAI53622.1| Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Danio
rerio]
Length = 147
Score = 285 bits (731), Expect = 6e-76, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRIHKELTDLGRDPPAQCSAGPVGDD--LFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DNEKYNRIAREWTQKYAM 147
>gb|AAH66917.1| Ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) [Homo
sapiens]
Length = 147
Score = 285 bits (730), Expect = 8e-76, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +++ +T+ AM
Sbjct: 118 PLVPELARIYKT-DRDKYNRISREWTQKYAM 147
>gb|AAL99224.1| ubiquitin-conjugating enzyme E2 [Gossypium thurberi]
gb|AAL99225.1| ubiquitin-conjugating enzyme E2 [Gossypium raimondii]
Length = 148
Score = 285 bits (730), Expect = 8e-76, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GPS++PY GGVF ++ P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYAGGVFLVSIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + + A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRAKYEATARGWTQKYAMG 148
>emb|CAG33197.1| UBE2D3 [Homo sapiens]
Length = 147
Score = 284 bits (729), Expect = 9e-76, Method: Composition-based stats.
Identities = 56/151 (37%), Positives = 90/151 (59%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE ++ R+ A + DD +F W A I GP+++PY+GGVF L P
Sbjct: 1 MALKRINKELSDLARDPPAQCSAGPVGDD--MFHWQATIMGPNDSPYQGGVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +++ +T+ A+
Sbjct: 118 PLVPEIARIYKT-DRDKYNRVSREWTQKYAI 147
>pdb|2C4P|A Chain A, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5a
pdb|2C4P|B Chain B, Crystal Structure Of Human Ubiquitin-Conjugating Enzyme
Ubch5a
Length = 165
Score = 284 bits (729), Expect = 9e-76, Method: Composition-based stats.
Identities = 60/152 (39%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Query: 2 QASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVP 61
+ R+ KE ++QR+ A + DD +F W A I GP ++ Y+GGVF L P
Sbjct: 18 SMALKRIQKELSDLQRDPPAHCSAGPVGDD--LFHWQATIMGPPDSAYQGGVFFLTVHFP 75
Query: 62 EPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPD 121
YP +PP++ F TKI+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 76 TDYPFKPPKIAFTTKIYHPNINS-NGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPD 134
Query: 122 SPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL D + +S D +N A+ +T+ AM
Sbjct: 135 DPLVPDIAQIYKS-DKEKYNRHAREWTQKYAM 165
>emb|CAN77754.1| hypothetical protein [Vitis vinifera]
emb|CAN81281.1| hypothetical protein [Vitis vinifera]
emb|CAO18318.1| unnamed protein product [Vitis vinifera]
emb|CAO39717.1| unnamed protein product [Vitis vinifera]
Length = 148
Score = 284 bits (729), Expect = 9e-76, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE K++Q++ + +D +F W A I GP ++PY GGVF + P
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPPDSPYAGGVFLVTIHFPP 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAMP 154
PL + ++ ++ D + + A+ +T+ AM
Sbjct: 118 PLVPEIAHMYKT-DRAKYETTARSWTQKYAMG 148
>emb|CAJ57640.1| putative ubiquitin conjugating enzyme 2 [Oesophagostomum dentatum]
Length = 147
Score = 284 bits (729), Expect = 9e-76, Method: Composition-based stats.
Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 4/151 (2%)
Query: 3 ASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPE 62
+ R+ KE +++ R+ A + DD +F W A I GP E+PY+G VF L P
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGDD--LFHWQATIMGPPESPYQGRVFFLTIHFPT 58
Query: 63 PYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDS 122
YP +PP+V F T+I+HPN++ G ICLDIL++ WSPA T+ V +I +L+ P PD
Sbjct: 59 DYPFKPPKVAFTTRIYHPNINS-NGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDD 117
Query: 123 PLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
PL + + ++ D +N +A+ +T+ AM
Sbjct: 118 PLVPEIARIYKT-DRDRYNQLAREWTQKYAM 147
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 23, 2008 5:56 PM
Number of letters in database: 883,778,997
Number of sequences in database: 2,617,685
Database: /host/Blast/data/nr_perl/nr.01
Posted date: May 23, 2008 5:54 PM
Number of letters in database: 976,759,346
Number of sequences in database: 2,761,413
Database: /host/Blast/data/nr_perl/nr.02
Posted date: May 23, 2008 5:48 PM
Number of letters in database: 374,670,760
Number of sequences in database: 1,165,270
Database: /host/Blast/data/nr_perl/nr.03
Posted date: Apr 28, 2009 5:40 PM
Number of letters in database: 114,943,120
Number of sequences in database: 354,819
Lambda K H
0.312 0.185 0.682
Lambda K H
0.267 0.0571 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,422,043,534
Number of Sequences: 6899187
Number of extensions: 215977904
Number of successful extensions: 356457
Number of sequences better than 10.0: 300
Number of HSP's better than 10.0 without gapping: 9096
Number of HSP's successfully gapped in prelim test: 815
Number of HSP's that attempted gapping in prelim test: 333289
Number of HSP's gapped (non-prelim): 10363
length of query: 157
length of database: 2,350,152,223
effective HSP length: 119
effective length of query: 38
effective length of database: 1,529,148,970
effective search space: 58107660860
effective search space used: 58107660860
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.9 bits)
S2: 74 (32.6 bits)