BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= YOL044W__[Saccharomyces_cerevisiae]
(383 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,899,187 sequences; 2,350,152,223 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
gb|EDN63830.1| peroxisome-related protein [Saccharomyces ce... 696 0.0
ref|NP_014598.1| Phosphorylated tail-anchored type II integ... 696 0.0
ref|XP_446014.1| unnamed protein product [Candida glabrata]... 73 3e-11
ref|XP_455427.1| unnamed protein product [Kluyveromyces lac... 63 3e-08
ref|XP_001643804.1| hypothetical protein Kpol_1044p4 [Vande... 57 2e-06
ref|NP_983682.1| ACR280Cp [Ashbya gossypii ATCC 10895] >gi|... 51 1e-04
ref|XP_001481573.1| conserved hypothetical protein [Aspergi... 38 1.5
ref|ZP_01924428.1| SSS sodium solute transporter superfamil... 37 1.8
ref|NP_001080024.1| hypothetical protein LOC379716 [Xenopus... 36 4.0
dbj|BAC41916.1| unknown protein [Arabidopsis thaliana] 36 5.9
ref|NP_180523.1| unknown protein [Arabidopsis thaliana] >gi... 35 7.4
>gb|EDN63830.1| peroxisome-related protein [Saccharomyces cerevisiae YJM789]
Length = 383
Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats.
Identities = 381/383 (99%), Positives = 382/383 (99%)
Query: 1 MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD 60
MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD
Sbjct: 1 MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD 60
Query: 61 CLEKMSEVGFIDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIE 120
CLEKMSEVGFIDITVF+SNPMILDLFVSACDIMPSFTKLGLTLQ EILNIFTLDTPQCIE
Sbjct: 61 CLEKMSEVGFIDITVFRSNPMILDLFVSACDIMPSFTKLGLTLQGEILNIFTLDTPQCIE 120
Query: 121 TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT 180
TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT
Sbjct: 121 TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT 180
Query: 181 TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA 240
TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA
Sbjct: 181 TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA 240
Query: 241 ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ 300
ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ
Sbjct: 241 ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ 300
Query: 301 STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK 360
STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK
Sbjct: 301 STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK 360
Query: 361 HVPAAFHTVYPQIVGLLKLLASI 383
HVPAAFHTVYPQIVGLLKLLASI
Sbjct: 361 HVPAAFHTVYPQIVGLLKLLASI 383
>ref|NP_014598.1| Phosphorylated tail-anchored type II integral peroxisomal membrane
protein required for peroxisome biogenesis, cells
lacking Pex15p mislocalize peroxisomal matrix proteins
to cytosol, overexpression results in impaired
peroxisome assembly; Pex15p [Saccharomyces cerevisiae]
sp|Q08215|PEX15_YEAST Peroxisomal membrane protein PEX15 (Peroxin-15) (Peroxisome
biosynthesis protein PAS21)
emb|CAA99046.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 383
Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats.
Identities = 383/383 (100%), Positives = 383/383 (100%)
Query: 1 MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD 60
MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD
Sbjct: 1 MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD 60
Query: 61 CLEKMSEVGFIDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIE 120
CLEKMSEVGFIDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIE
Sbjct: 61 CLEKMSEVGFIDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIE 120
Query: 121 TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT 180
TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT
Sbjct: 121 TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT 180
Query: 181 TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA 240
TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA
Sbjct: 181 TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA 240
Query: 241 ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ 300
ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ
Sbjct: 241 ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ 300
Query: 301 STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK 360
STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK
Sbjct: 301 STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK 360
Query: 361 HVPAAFHTVYPQIVGLLKLLASI 383
HVPAAFHTVYPQIVGLLKLLASI
Sbjct: 361 HVPAAFHTVYPQIVGLLKLLASI 383
>ref|XP_446014.1| unnamed protein product [Candida glabrata]
emb|CAG58938.1| unnamed protein product [Candida glabrata CBS 138]
Length = 374
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 96/389 (24%), Positives = 179/389 (46%), Gaps = 36/389 (9%)
Query: 7 MNNLPMHSLDSSLRDLLNDDLFIESDESTKSV---NDQRSEVFQECVNLFIKRDIKDCLE 63
M+N+ S +++++LL+DD F SDE S +D S+ + C++LFIK + K CLE
Sbjct: 10 MSNVLPESTMTTVQNLLDDDDF--SDEPAMSPYQNDDNTSDEYYNCLDLFIKGEPKQCLE 67
Query: 64 KMSEVGFIDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIETRK 123
M G ++ + N ++LF++AC + LG++LQ++I+ +F + +E +
Sbjct: 68 AMLSCGLLNESQIFQNMDSVELFINACSRVSDLATLGISLQNKIIQLFIYS--EILEFVR 125
Query: 124 IILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTL-ELESIMSDFIFVYITKMRTTI 182
S L +I K I+ I E+ + E ++++ D F K RT
Sbjct: 126 RNSPAASALALITKLHGNIIRAIGLMRGSRDERYQIIADEKDALIHDIGFH--VKKRTNE 183
Query: 183 DV----VGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIE 238
V + L E+++F V+++L KK SP +Y LC + +L L + +
Sbjct: 184 SRRQYNVEMLMLAELYLFDVQIQLEGKKKSPKLYEDLCDKVLQLKSVFDETVLDEK-PLS 242
Query: 239 DAILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHE-PMLHNSSEEQVKVEDAFNQRTSTDS 297
IL ++ K + K ++ +++ P + +Q+K++ N S +
Sbjct: 243 QIILAKLEQKKDSVEKKKSSSRKSLRESTKVLQAIPTPSDEVRDQIKMD---NLALSKGA 299
Query: 298 RLQSTGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKN---GLLLTGLLLLLCLKKYKS 354
T P+K W LK T+ + KN L+ + ++L +K+Y+
Sbjct: 300 FSSITSHIPQK------------W--LKALTTQKWIYKNMKQLSLVLVVAVILLVKRYRM 345
Query: 355 LMAIFKHVPAAFHTVYPQIVGLLKLLASI 383
+ F +P+ + P IV +L+LL+S+
Sbjct: 346 ITKWFGEIPSTLSQLKPAIVEILRLLSSL 374
>ref|XP_455427.1| unnamed protein product [Kluyveromyces lactis]
emb|CAG98135.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 357
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 11/213 (5%)
Query: 17 SSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKDCLEKMSEVGFIDITVF 76
+ L LL+DD F + + D E QEC++L++K D+K+CLE M E G ++
Sbjct: 13 TRLEQLLDDDRFRLNLQPV----DIEKEHAQECLDLYVKGDLKECLELMYEYGLLNSNKM 68
Query: 77 KSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIETRKIILGDLSKLLVIN 136
+++ L + M + +G +L + FT + + R I + LS L+I
Sbjct: 69 QTSLKSWQLMMDCVSQMNNVGVIGTSLDKRLKEWFTNEE---LLLRLIKMKPLSDQLIIT 125
Query: 137 -KFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRTTIDVVGLQELIEIFI 195
+FF +K + N+ + E + EL + + + +T ++ L ++++ I
Sbjct: 126 YQFFYSSLKFWKRNVKQNYEHID---ELSISCKELLLQTSRRCQTVTEIQNLSQILDFLI 182
Query: 196 FQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKG 228
F V+++ KK S MY C+ KL LK
Sbjct: 183 FDVQIETLQKKASITMYTRFCQLDDKLQSKLKA 215
>ref|XP_001643804.1| hypothetical protein Kpol_1044p4 [Vanderwaltozyma polyspora DSM
70294]
gb|EDO15946.1| hypothetical protein Kpol_1044p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 370
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 118/242 (48%), Gaps = 22/242 (9%)
Query: 21 DLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKDCLEKMSEVGFIDITVFKSNP 80
++L++D F+ DES V+D + +Q+C+N F+ D C+E M++ GF+D + + +
Sbjct: 24 EVLDEDEFL--DESEVKVDDT-TRKYQQCLNTFVGGDPIKCIELMNKYGFLDQNLMEDSD 80
Query: 81 M-ILDLFVSACDIMPSFTKL---GLTLQSEILNIFTLDTPQCIETRKIILGDLSKLLVIN 136
+ IL+LF + C+ +P+F + + ILN + D + + L +
Sbjct: 81 IPILELFFNVCENIPNFKSIKSEDFVIVESILNKYLEDNDSSLN---------NDLTLYV 131
Query: 137 KFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRTTIDV-VGLQELIEIFI 195
KF + IK ++ + + E ++++L + + I + ++ DV + + E+IEI+
Sbjct: 132 KFLKSYIKFLKSDSI--KDNEVRSIDLGYKVKNVI--AKINVESSEDVHMEICEMIEIYF 187
Query: 196 FQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDAILNSIDNKIQKDKAK 255
+++KL + + Y CK+ P + L + + I+N + K QK K
Sbjct: 188 VHIEIKLQENSLTTSRYELFCKSNPVIHQLLN-TKTKNGQTYYNMIMNQLTPKDQKVSKK 246
Query: 256 SK 257
SK
Sbjct: 247 SK 248
>ref|NP_983682.1| ACR280Cp [Ashbya gossypii ATCC 10895]
gb|AAS51506.1| ACR280Cp [Ashbya gossypii ATCC 10895]
Length = 357
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 115/256 (44%), Gaps = 12/256 (4%)
Query: 11 PMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKDCLEKMSEVGF 70
P SLDS LL +LF D V D + E +EC +L++K L K+ + G
Sbjct: 8 PSLSLDS----LLQHELF--QDARAGKV-DSQEERLRECRDLYLKAHFGGFLVKVYQYGL 60
Query: 71 IDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIETRKIILGDLS 130
++ + + ++A + + S ++ ++ ++ + + + L L
Sbjct: 61 LEDGAQRYTADVWGWVLAAVNGLRSANEIPSSVLRQLRTELSRSSGGVYDVVSA-LSVLE 119
Query: 131 KLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRTTIDVVGLQEL 190
+ ++ +FR +++ D E + +E + + + + + ++ L +L
Sbjct: 120 RARLLLSYFRSAVRLASL---DTAENADYLRRVEGNLCRELGRLVLDVHSEQELGYLVKL 176
Query: 191 IEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKD-VSIEDAILNSIDNKI 249
+E+++ ++V+ H++ ++YW LC+ P +S L G S++ VS E+ IL + K
Sbjct: 177 VELYLLDLQVRCLHREMDKSLYWTLCRKFPLMSRKLSGSPQSRNGVSCEEHILLQLQPKK 236
Query: 250 QKDKAKSKGKQRGVKQ 265
+ K K +R V +
Sbjct: 237 KTIKNKHASSERRVAR 252
>ref|XP_001481573.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
gb|EBA27381.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
Length = 692
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 242 LNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQS 301
L +I ++Q D + KG Q G F + +L ++ + ++ D +RT+ SRL
Sbjct: 16 LKAILEQMQADHSDEKGVQAGASSS--SFQDALLKANTVLE-EILDDLQRRTTRQSRLAK 72
Query: 302 TGTAPRKKNNDITVLAGSFWAV--LKHHFTRSVLNKNGLLLTGLLLLLCL 349
G P KK + L GS + LK +F +LN +LT L+ CL
Sbjct: 73 LGW-PSKKGD----LEGSIAQLERLKTYFILVILNDRSCVLTSLIYCPCL 117
>ref|ZP_01924428.1| SSS sodium solute transporter superfamily [Victivallis vadensis
ATCC BAA-548]
gb|EDM95109.1| SSS sodium solute transporter superfamily [Victivallis vadensis
ATCC BAA-548]
Length = 495
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 306 PRKKNNDITVLAGSFWA------VLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIF 359
P++ ND+T++ S + L FTR V NG LLTGL++ LC +++ F
Sbjct: 393 PKESINDMTIILASLFGGGLLSIYLLGFFTRRV--GNGALLTGLVIALCFNVLM-MLSSF 449
Query: 360 KHVPAAFHTVYPQIV--GLLKLLA 381
+ FH+ + I+ G+L L+A
Sbjct: 450 GVIRMPFHSYWTSILVNGILALIA 473
>ref|NP_001080024.1| hypothetical protein LOC379716 [Xenopus laevis]
gb|AAH59330.1| MGC69071 protein [Xenopus laevis]
Length = 246
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 20 RDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKDCLEKMSEVGFIDITVFKSN 79
RDL L +E++ S K ++D+ SE N + R ++ + I +F+SN
Sbjct: 137 RDLYEIKLLMEAETSGKHLSDKLSED-----NGVVSRGSSSSRHPIALQIRLLIHIFRSN 191
Query: 80 P-MILDLFVSACDIMPSFTKLGL-----------TLQSEILNIFTLDTP 116
P ++LDL ++CD+ KLGL L S IL+I TL P
Sbjct: 192 PPLLLDLLKNSCDLFIPLDKLGLYKTNPGFVGLCGLTSSILSILTLLHP 240
>dbj|BAC41916.1| unknown protein [Arabidopsis thaliana]
Length = 512
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 217 KTLPKLSPTLKGLYLSKDVSIEDAILNSIDN-KIQKDKAKSKGKQRGVKQKIHHFHEPML 275
+ L P + +D +++ NS D KI D + + +R Q+ F EP
Sbjct: 334 RNLEPTVPQSDSAFFKRDEELKELSENSADEIKISYDSDEHEPSERTTDQE---FEEPYE 390
Query: 276 HNSSEEQVKVEDAFNQRTSTDSRLQSTGTAPRKKNNDITVLAGSFWAVLKH 326
N EE+ ++ +A + + + T+PR D+ L + W VL H
Sbjct: 391 RNDGEERQQLVEAEASDVNHHGNSEESVTSPRSVLPDMLHLDQTAWEVLDH 441
>ref|NP_180523.1| unknown protein [Arabidopsis thaliana]
gb|AAC35233.1| hypothetical protein [Arabidopsis thaliana]
Length = 747
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 217 KTLPKLSPTLKGLYLSKDVSIEDAILNSIDN-KIQKDKAKSKGKQRGVKQKIHHFHEPML 275
+ L P + +D +++ NS D KI D + + +R Q+ F EP
Sbjct: 569 RNLEPTVPQSDSAFFKRDEELKELSENSADEIKISYDSDEHEPSERTTDQE---FEEPYE 625
Query: 276 HNSSEEQVKVEDAFNQRTSTDSRLQSTGTAPRKKNNDITVLAGSFWAVLKH 326
N EE+ ++ +A + + + T+PR D+ L + W VL H
Sbjct: 626 RNDGEERQQLVEAEASDVNHHGNSEESVTSPRSVLPDMLHLDQTAWEVLDH 676
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
gb|EDN63830.1| peroxisome-related protein [Saccharomyces ce... 569 e-161
ref|NP_014598.1| Phosphorylated tail-anchored type II integ... 566 e-160
ref|XP_446014.1| unnamed protein product [Candida glabrata]... 380 e-103
ref|NP_983682.1| ACR280Cp [Ashbya gossypii ATCC 10895] >gi|... 314 9e-84
ref|XP_455427.1| unnamed protein product [Kluyveromyces lac... 254 7e-66
ref|XP_001643804.1| hypothetical protein Kpol_1044p4 [Vande... 247 9e-64
Sequences not found previously or not previously below threshold:
ref|YP_001304172.1| cysteinyl-tRNA synthetase [Parabacteroi... 41 0.11
ref|YP_988614.1| FtsK/SpoIIIE family protein [Bartonella ba... 39 0.49
ref|XP_001518189.1| PREDICTED: similar to Vps39/Vam6-like p... 38 1.5
ref|ZP_01924428.1| SSS sodium solute transporter superfamil... 38 1.6
ref|XP_001459777.1| hypothetical protein GSPATT00025114001 ... 38 1.8
ref|XP_001642383.1| hypothetical protein Kpol_274p8 [Vander... 37 2.2
ref|XP_956670.1| hypothetical protein NCU00157 [Neurospora ... 36 4.6
ref|XP_001887599.1| predicted protein [Laccaria bicolor S23... 36 6.0
ref|XP_001459513.1| hypothetical protein GSPATT00024847001 ... 36 6.3
emb|CAO80294.1| hypothetical protein [Candidatus Cloacamona... 35 7.6
CONVERGED!
>gb|EDN63830.1| peroxisome-related protein [Saccharomyces cerevisiae YJM789]
Length = 383
Score = 569 bits (1468), Expect = e-161, Method: Composition-based stats.
Identities = 381/383 (99%), Positives = 382/383 (99%)
Query: 1 MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD 60
MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD
Sbjct: 1 MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD 60
Query: 61 CLEKMSEVGFIDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIE 120
CLEKMSEVGFIDITVF+SNPMILDLFVSACDIMPSFTKLGLTLQ EILNIFTLDTPQCIE
Sbjct: 61 CLEKMSEVGFIDITVFRSNPMILDLFVSACDIMPSFTKLGLTLQGEILNIFTLDTPQCIE 120
Query: 121 TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT 180
TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT
Sbjct: 121 TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT 180
Query: 181 TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA 240
TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA
Sbjct: 181 TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA 240
Query: 241 ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ 300
ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ
Sbjct: 241 ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ 300
Query: 301 STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK 360
STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK
Sbjct: 301 STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK 360
Query: 361 HVPAAFHTVYPQIVGLLKLLASI 383
HVPAAFHTVYPQIVGLLKLLASI
Sbjct: 361 HVPAAFHTVYPQIVGLLKLLASI 383
>ref|NP_014598.1| Phosphorylated tail-anchored type II integral peroxisomal membrane
protein required for peroxisome biogenesis, cells
lacking Pex15p mislocalize peroxisomal matrix proteins
to cytosol, overexpression results in impaired
peroxisome assembly; Pex15p [Saccharomyces cerevisiae]
sp|Q08215|PEX15_YEAST Peroxisomal membrane protein PEX15 (Peroxin-15) (Peroxisome
biosynthesis protein PAS21)
emb|CAA99046.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 383
Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats.
Identities = 383/383 (100%), Positives = 383/383 (100%)
Query: 1 MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD 60
MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD
Sbjct: 1 MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKD 60
Query: 61 CLEKMSEVGFIDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIE 120
CLEKMSEVGFIDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIE
Sbjct: 61 CLEKMSEVGFIDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIE 120
Query: 121 TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT 180
TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT
Sbjct: 121 TRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRT 180
Query: 181 TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA 240
TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA
Sbjct: 181 TIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDA 240
Query: 241 ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ 300
ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ
Sbjct: 241 ILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQ 300
Query: 301 STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK 360
STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK
Sbjct: 301 STGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFK 360
Query: 361 HVPAAFHTVYPQIVGLLKLLASI 383
HVPAAFHTVYPQIVGLLKLLASI
Sbjct: 361 HVPAAFHTVYPQIVGLLKLLASI 383
>ref|XP_446014.1| unnamed protein product [Candida glabrata]
emb|CAG58938.1| unnamed protein product [Candida glabrata CBS 138]
Length = 374
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 96/389 (24%), Positives = 179/389 (46%), Gaps = 36/389 (9%)
Query: 7 MNNLPMHSLDSSLRDLLNDDLFIESDESTKSV---NDQRSEVFQECVNLFIKRDIKDCLE 63
M+N+ S +++++LL+DD F SDE S +D S+ + C++LFIK + K CLE
Sbjct: 10 MSNVLPESTMTTVQNLLDDDDF--SDEPAMSPYQNDDNTSDEYYNCLDLFIKGEPKQCLE 67
Query: 64 KMSEVGFIDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIETRK 123
M G ++ + N ++LF++AC + LG++LQ++I+ +F + +E +
Sbjct: 68 AMLSCGLLNESQIFQNMDSVELFINACSRVSDLATLGISLQNKIIQLFIYS--EILEFVR 125
Query: 124 IILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTL-ELESIMSDFIFVYITKMRTTI 182
S L +I K I+ I E+ + E ++++ D F K RT
Sbjct: 126 RNSPAASALALITKLHGNIIRAIGLMRGSRDERYQIIADEKDALIHDIGFH--VKKRTNE 183
Query: 183 DV----VGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIE 238
V + L E+++F V+++L KK SP +Y LC + +L L + +
Sbjct: 184 SRRQYNVEMLMLAELYLFDVQIQLEGKKKSPKLYEDLCDKVLQLKSVFDETVLDEK-PLS 242
Query: 239 DAILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHE-PMLHNSSEEQVKVEDAFNQRTSTDS 297
IL ++ K + K ++ +++ P + +Q+K++ N S +
Sbjct: 243 QIILAKLEQKKDSVEKKKSSSRKSLRESTKVLQAIPTPSDEVRDQIKMD---NLALSKGA 299
Query: 298 RLQSTGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNG---LLLTGLLLLLCLKKYKS 354
T P+K W LK T+ + KN L+ + ++L +K+Y+
Sbjct: 300 FSSITSHIPQK------------W--LKALTTQKWIYKNMKQLSLVLVVAVILLVKRYRM 345
Query: 355 LMAIFKHVPAAFHTVYPQIVGLLKLLASI 383
+ F +P+ + P IV +L+LL+S+
Sbjct: 346 ITKWFGEIPSTLSQLKPAIVEILRLLSSL 374
>ref|NP_983682.1| ACR280Cp [Ashbya gossypii ATCC 10895]
gb|AAS51506.1| ACR280Cp [Ashbya gossypii ATCC 10895]
Length = 357
Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats.
Identities = 68/354 (19%), Positives = 144/354 (40%), Gaps = 28/354 (7%)
Query: 11 PMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKDCLEKMSEVGF 70
P SLDS LL +LF D V D + E +EC +L++K L K+ + G
Sbjct: 8 PSLSLDS----LLQHELF--QDARAGKV-DSQEERLRECRDLYLKAHFGGFLVKVYQYGL 60
Query: 71 IDITVFKSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIETRKIILGDLS 130
++ + + ++A + + S ++ ++ ++ + + + L L
Sbjct: 61 LEDGAQRYTADVWGWVLAAVNGLRSANEIPSSVLRQLRTELSRSSGGVYDVVSA-LSVLE 119
Query: 131 KLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRTTIDVVGLQEL 190
+ ++ +FR +++ D E + +E + + + + + ++ L +L
Sbjct: 120 RARLLLSYFRSAVRLASL---DTAENADYLRRVEGNLCRELGRLVLDVHSEQELGYLVKL 176
Query: 191 IEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKD-VSIEDAILNSIDNKI 249
+E+++ ++V+ H++ ++YW LC+ P +S L G S++ VS E+ IL + K
Sbjct: 177 VELYLLDLQVRCLHREMDKSLYWTLCRKFPLMSRKLSGSPQSRNGVSCEEHILLQLQPKK 236
Query: 250 QKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQSTGTAPRKK 309
+ K K +R V + + +Q +V N T T +
Sbjct: 237 KTIKNKHASSERRVARPS---SAAPPRPGARQQDRVARP-NLPLMTPGSPMLTA---DRS 289
Query: 310 NNDITVLAGSFWAVLKHHFTRSVL---NKNGLLLTGLLLLLCLKKYKSLMAIFK 360
N S+ A+L + L + + ++L + L+K + FK
Sbjct: 290 ENCERKPRHSYAAILNYL--PKWLTDFTDSRFIALVVMLAIALRKLR----WFK 337
>ref|XP_455427.1| unnamed protein product [Kluyveromyces lactis]
emb|CAG98135.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 357
Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 11/222 (4%)
Query: 17 SSLRDLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKDCLEKMSEVGFIDITVF 76
+ L LL+DD F + + D E QEC++L++K D+K+CLE M E G ++
Sbjct: 13 TRLEQLLDDDRFRLNLQPV----DIEKEHAQECLDLYVKGDLKECLELMYEYGLLNSNKM 68
Query: 77 KSNPMILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIETRKIILGDLSKLLVIN 136
+++ L + M + +G +L + FT + + R I + LS L+I
Sbjct: 69 QTSLKSWQLMMDCVSQMNNVGVIGTSLDKRLKEWFTNEE---LLLRLIKMKPLSDQLIIT 125
Query: 137 -KFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRTTIDVVGLQELIEIFI 195
+FF +K + N+ + E + EL + + + +T ++ L ++++ I
Sbjct: 126 YQFFYSSLKFWKRNVKQNYEHID---ELSISCKELLLQTSRRCQTVTEIQNLSQILDFLI 182
Query: 196 FQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSI 237
F V+++ KK S MY C+ KL LK + S+
Sbjct: 183 FDVQIETLQKKASITMYTRFCQLDDKLQSKLKANKVKHAQSV 224
>ref|XP_001643804.1| hypothetical protein Kpol_1044p4 [Vanderwaltozyma polyspora DSM
70294]
gb|EDO15946.1| hypothetical protein Kpol_1044p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 370
Score = 247 bits (632), Expect = 9e-64, Method: Composition-based stats.
Identities = 75/368 (20%), Positives = 162/368 (44%), Gaps = 26/368 (7%)
Query: 21 DLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKDCLEKMSEVGFIDITVFKSNP 80
++L++D F+ DES V+D + +Q+C+N F+ D C+E M++ GF+D + + +
Sbjct: 24 EVLDEDEFL--DESEVKVDDT-TRKYQQCLNTFVGGDPIKCIELMNKYGFLDQNLMEDSD 80
Query: 81 M-ILDLFVSACDIMPSFTKL---GLTLQSEILNIFTLDTPQCIETRKIILGDLSKLLVIN 136
+ IL+LF + C+ +P+F + + ILN + D + + L +
Sbjct: 81 IPILELFFNVCENIPNFKSIKSEDFVIVESILNKYLEDNDSSLN---------NDLTLYV 131
Query: 137 KFFRCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRTTIDV-VGLQELIEIFI 195
KF + IK ++ + + E ++++L + + I + ++ DV + + E+IEI+
Sbjct: 132 KFLKSYIKFLKSDSI--KDNEVRSIDLGYKVKNVI--AKINVESSEDVHMEICEMIEIYF 187
Query: 196 FQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDAILNSIDNKIQKDKAK 255
+++KL + + Y CK+ P + L + + I+N + K QK K
Sbjct: 188 VHIEIKLQENSLTTSRYELFCKSNPVIHQLLN-TKTKNGQTYYNMIMNQLTPKDQKVSKK 246
Query: 256 SKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTDSRLQSTGTAPRKKNNDITV 315
SK + + H H+ +++ + + + + + N I+
Sbjct: 247 SKPTVSSQQHQHQHQHQHNHNHNQHQHKRSNSNNKTMGDKKDKNAEQSSNNQSLTNQISR 306
Query: 316 LAGSFWAVLKHHFTRSVLNKNGLLLTGLLLLLCLKKYKSLMAIFKHVPAAFHTVYPQIVG 375
L + R ++ L++ LL++ ++ + L + + P ++
Sbjct: 307 TLRR----LSIFYNRLEISHRSLIVIILLIVTLSRRLRFLGKAKDLILNIKGKLAPSLMQ 362
Query: 376 LLKLLASI 383
LL +LAS+
Sbjct: 363 LLNILASV 370
>ref|YP_001304172.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
sp|A6LFT6|SYC_PARD8 Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
gb|ABR44550.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
Length = 491
Score = 41.4 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 32/81 (39%)
Query: 180 TTIDVVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIED 239
+ D+ LQE+ +F+F + S N Y A K + L + +KD + D
Sbjct: 406 SEEDLKELQEVFHLFLFDILGMKDEASASGNHYEAFGKAVDLLLSIRQQAKANKDWATSD 465
Query: 240 AILNSIDNKIQKDKAKSKGKQ 260
I N + + K G +
Sbjct: 466 KIRNELTAMGFEIKDTKDGAE 486
>ref|YP_988614.1| FtsK/SpoIIIE family protein [Bartonella bacilliformis KC583]
gb|ABM45556.1| FtsK/SpoIIIE family protein [Bartonella bacilliformis KC583]
Length = 872
Score = 39.5 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 94/258 (36%), Gaps = 49/258 (18%)
Query: 93 MPSFTKLGLTLQSEILNIFTLDTPQCIETRKIILGDLSKLLVINKFFRCCIKVIQ--FNL 150
M + QS+ ++ F+ + + + R I + + I+K F V + F L
Sbjct: 4 MRNLKT-----QSDSVSFFSDNNAESVSERSINASEENSFSNISKMF-SYPAVWEKAFTL 57
Query: 151 TDHTEQEEKTLELESIMSDFIFVYITKMRTTIDVV-GLQELIEIFIFQVKVKLHHKKPSP 209
+ + +T E+E + I + + Q+L +I +K +
Sbjct: 58 GQNV-RFTRTPEVEILRRRIEKDPIFAKQFEAFIQQESQKLTDI------IKCDQESI-- 108
Query: 210 NMYWALCKTLPKLSPTLKGLYLSKDVS-IEDAILNSIDNKIQKDKAKSKGKQ-------R 261
LP + L + S IL + +I + + Q
Sbjct: 109 --------KLPLVEKELNAQSVDNKSSFYSSTILKQSEQQIIATRTEHASTQYVHAVQAE 160
Query: 262 GVKQKIHHFHEPMLHNSS--------EEQVKVEDAFNQRTSTDSRLQSTGTAPRKKNNDI 313
V+Q I F L +++ EQ+KV+D + TS DS T + + +D+
Sbjct: 161 SVEQGIKPF--CYLSDTAFFECEPLMLEQIKVQDPQREATSIDSANNETLS---EAVSDM 215
Query: 314 TVLAGSFWAVLKHHFTRS 331
++ S + VLK F +S
Sbjct: 216 SIT--SLYRVLKCRFPQS 231
>ref|XP_001518189.1| PREDICTED: similar to Vps39/Vam6-like protein, partial
[Ornithorhynchus anatinus]
Length = 1309
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 24/48 (50%)
Query: 1 MAASEIMNNLPMHSLDSSLRDLLNDDLFIESDESTKSVNDQRSEVFQE 48
+A++ + L S+ + ++ LL D F + + + +D SE Q+
Sbjct: 720 VASNHFVWRLLPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKLQQ 767
>ref|ZP_01924428.1| SSS sodium solute transporter superfamily [Victivallis vadensis
ATCC BAA-548]
gb|EDM95109.1| SSS sodium solute transporter superfamily [Victivallis vadensis
ATCC BAA-548]
Length = 495
Score = 37.6 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 281 EQVKVEDAFNQRTSTDSRLQSTG--TAPRKKNNDITVLAGSFWA------VLKHHFTRSV 332
E ++ A + S + G P++ ND+T++ S + L FTR V
Sbjct: 366 EALRFAKAVSLLVSAGMIGGAVGIHYIPKESINDMTIILASLFGGGLLSIYLLGFFTRRV 425
Query: 333 LNKNGLLLTGLLLLLCLKKYKSLMAIFKHVPAAFHTVYPQIV--GLLKLLA 381
NG LLTGL++ LC L + F + FH+ + I+ G+L L+A
Sbjct: 426 --GNGALLTGLVIALCFNVLMMLSS-FGVIRMPFHSYWTSILVNGILALIA 473
>ref|XP_001459777.1| hypothetical protein GSPATT00025114001 [Paramecium tetraurelia strain
d4-2]
emb|CAK92380.1| unnamed protein product [Paramecium tetraurelia]
Length = 1319
Score = 37.6 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Query: 231 LSKDVSIEDAILNSIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVK-VEDAF 289
S + D I + K K K++ + K + + P+ + E+ V ++A+
Sbjct: 1082 TSNKQWLADNIQLILSPK------TLKSKRKIILDKFNAIYGPLEKKNEEDPVAGFDNAW 1135
Query: 290 NQR--TSTDSRLQSTGTAPRKKNNDITVLAGSFWAVLKHHFTRSVLNKNGLLLTGLLLL 346
N R T SR + T+P+K N I ++ S A+LK+ L ++ + T + +
Sbjct: 1136 NFRQFTKNSSRTEMARTSPQKFNKRIDNMSESTKAILKY-----WLYRSRHMKTAIKYI 1189
>ref|XP_001642383.1| hypothetical protein Kpol_274p8 [Vanderwaltozyma polyspora DSM
70294]
gb|EDO14525.1| hypothetical protein Kpol_274p8 [Vanderwaltozyma polyspora DSM
70294]
Length = 477
Score = 37.2 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 184 VVGLQELIEIFIFQVKVKLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDAILN 243
+++L + QV++ H K + +L +++P+ YLSK+ SI L+
Sbjct: 283 RQEIEQLDQFIQKQVQIS-QHLKADEEEHMSLVQSIPR-----DITYLSKNQSITKQTLS 336
Query: 244 SIDNKIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRT 293
KI K + +Q F + + +S ++++ F Q+
Sbjct: 337 QDLRKIAFIKETTDQSISNTQQFTILFQQLLTPDSKVSSIELDKFFQQKI 386
>ref|XP_956670.1| hypothetical protein NCU00157 [Neurospora crassa OR74A]
sp|Q7RXQ1|CSN1_NEUCR COP9 signalosome complex subunit 1 (CSN complex subunit 1)
gb|EAA27434.1| conserved hypothetical protein [Neurospora crassa OR74A]
gb|ABB36580.1| CSN-1 [Neurospora crassa]
Length = 425
Score = 36.0 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 61/192 (31%), Gaps = 31/192 (16%)
Query: 6 IMNNLPMHSLDSSLR---DLLNDDLFIESDESTKSVNDQRSEVFQECVNLFIKRDIKDCL 62
I L + +LL++D F E + R + + F+ C+
Sbjct: 239 IYGGLLALATMDRHELQANLLDNDSFREFLQ--------REPHIRRAITQFVNGRYAACI 290
Query: 63 EKMSEVG---FIDITVFKSNPM---------ILDLF--VSAC--DIM-PSFTKLGLTLQS 105
E + +DI + K P I+ S D M +F G +++
Sbjct: 291 EILESYRPDYLLDIYLQKHVPKLYADIRTKSIVQYLKPFSCVRLDTMQKAFNGPGPSIED 350
Query: 106 EILNIFTLDTPQCIETRKIILGDLSKLLVINKFFRCCIKVIQFNLTDHTEQEEKTLELES 165
E+ FT+ + R + L + + + + I+ + E K
Sbjct: 351 EL---FTMIKDGKLNARIDAINKSKALQTLENYEKQALDRIRRMNIMAADLEVKGSRKPG 407
Query: 166 IMSDFIFVYITK 177
M+D F T
Sbjct: 408 GMNDIPFSMTTD 419
>ref|XP_001887599.1| predicted protein [Laccaria bicolor S238N-H82]
gb|EDR01786.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 470
Score = 35.6 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 14/114 (12%)
Query: 82 ILDLFVSACDIMPSFTKLGLTLQSEILNIFTLDTPQCIETRKIILGDLSKLLV-----IN 136
LD+ AC+ P+ L + L +++ I + + + + V +
Sbjct: 312 SLDIAFYACETFPNLNVLPI-LITQLRKITSDSNLEEFRLLADYSPPPNDIHVVDDGWLT 370
Query: 137 KFFRCCIKVIQ-FNLTDHTEQEEKTLELESIMSDFIFVYITKMRTTIDVVGLQE 189
+F C + Q +L + K ++ +M +T LQ
Sbjct: 371 RF--CRLPFWQELDLILTHPRFSKLRRVDVSFKR-----TDEMESTSSEFELQM 417
>ref|XP_001459513.1| hypothetical protein GSPATT00024847001 [Paramecium tetraurelia
strain d4-2]
emb|CAK92116.1| unnamed protein product [Paramecium tetraurelia]
Length = 354
Score = 35.6 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 58/169 (34%), Gaps = 19/169 (11%)
Query: 140 RCCIKVIQFNLTDHTEQEEKTLELESIMSDFIFVYITKMRTTIDVVGLQELIEIFIFQVK 199
+ +K +Q E+ + + I + DV E I+ I K
Sbjct: 120 KSTVKKLQIQEIQ--EKVQDLQDEIIICKERQKNTEIAKHQAEDV---LEQIDDDILHAK 174
Query: 200 VKLHH-KKPSPNMYWALCKTLPKLS---------PTLKGLYLSKDVSIEDAI--LNSIDN 247
+KL K +Y ++ K + TLK S+ LN + N
Sbjct: 175 IKLQQVKSQGEQIYESMSKLEDQQHDKKYYMGRTSTLKR-KRSEIQPPNQIKNQLNQLKN 233
Query: 248 KIQKDKAKSKGKQRGVKQKIHHFHEPMLHNSSEEQVKVEDAFNQRTSTD 296
+I++ K K K+ QKI + + + E + ED N S D
Sbjct: 234 EIEQLKQSKKEKEEYYAQKIREIEQQLDQRKTNESIP-EDQLNASLSPD 281
>emb|CAO80294.1| hypothetical protein [Candidatus Cloacamonas acidaminovorans]
Length = 552
Score = 35.2 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 16/140 (11%)
Query: 150 LTDHTEQEEKTLELESIMSDFIFVYITKMRTTIDVVGLQELIEI--FIF---QVKV---- 200
L E LESI S+ + I ++TT + + L EL EI F+F ++
Sbjct: 70 LKAIKESRALEARLESIFSELSLLPIKHLKTT-ERLELNELFEIKSFLFSYLHLQEILQE 128
Query: 201 -KLHHKKPSPNMYWALCKTLPKLSPTLKGLYLSKDVSIEDAILNSIDNKIQKDKAKSKGK 259
KL+H+ P P+M K L P L + ++L + K + K
Sbjct: 129 HKLNHQHPLPDMQ----KMFSLLDPEGNKLPTFRIYPSYSSVLKKLTQKQFAIAKRLKEA 184
Query: 260 QRGVKQKIHH-FHEPMLHNS 278
++ +K P L
Sbjct: 185 RKRDLEKAKQELGMPTLKEE 204
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 23, 2008 5:56 PM
Number of letters in database: 883,778,997
Number of sequences in database: 2,617,685
Database: /host/Blast/data/nr_perl/nr.01
Posted date: May 23, 2008 5:54 PM
Number of letters in database: 976,759,346
Number of sequences in database: 2,761,413
Database: /host/Blast/data/nr_perl/nr.02
Posted date: May 23, 2008 5:48 PM
Number of letters in database: 374,670,760
Number of sequences in database: 1,165,270
Database: /host/Blast/data/nr_perl/nr.03
Posted date: Apr 28, 2009 5:40 PM
Number of letters in database: 114,943,120
Number of sequences in database: 354,819
Lambda K H
0.312 0.151 0.395
Lambda K H
0.267 0.0462 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,265,560,962
Number of Sequences: 6899187
Number of extensions: 135341797
Number of successful extensions: 414799
Number of sequences better than 10.0: 220
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 414458
Number of HSP's gapped (non-prelim): 483
length of query: 383
length of database: 2,350,152,223
effective HSP length: 136
effective length of query: 247
effective length of database: 1,411,862,791
effective search space: 348730109377
effective search space used: 348730109377
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 80 (35.3 bits)