BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= YOR193W__[Saccharomyces_cerevisiae]
(376 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
6,899,187 sequences; 2,350,152,223 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_014836.1| Peripheral peroxisomal membrane protein in... 654 0.0
gb|EDN63529.1| peroxisome-related protein [Saccharomyces ce... 645 0.0
ref|NP_015213.1| Peripheral peroxisomal membrane peroxin re... 56 6e-06
gb|AAT92840.1| YPL112C [Saccharomyces cerevisiae] 55 6e-06
gb|EDN61031.1| peroxin [Saccharomyces cerevisiae YJM789] 55 1e-05
ref|NP_986892.1| AGR226Wp [Ashbya gossypii ATCC 10895] >gi|... 46 0.004
ref|XP_455112.1| unnamed protein product [Kluyveromyces lac... 44 0.031
ref|XP_447712.1| hypothetical protein CAGL0I10879g [Candida... 39 0.93
ref|YP_001124388.1| Amine oxidase, flavin-containing [Geoba... 37 1.7
ref|ZP_02864695.1| hypothetical protein CPC_2278 [Clostridi... 35 7.5
>ref|NP_014836.1| Peripheral peroxisomal membrane protein involved in controlling
peroxisome size and number, interacts with homologous
protein Pex25p; Pex27p [Saccharomyces cerevisiae]
sp|Q08580|PEX27_YEAST Peroxisomal membrane protein PEX27 (Peroxin-27)
emb|CAA99406.1| unnamed protein product [Saccharomyces cerevisiae]
gb|AAU09786.1| YOR193W [Saccharomyces cerevisiae]
Length = 376
Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats.
Identities = 376/376 (100%), Positives = 376/376 (100%)
Query: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI
Sbjct: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
Query: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE
Sbjct: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
Query: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR
Sbjct: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
Query: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT
Sbjct: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
Query: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP
Sbjct: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
Query: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL 360
TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL
Sbjct: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL 360
Query: 361 WNRAKVTSANEHTSAV 376
WNRAKVTSANEHTSAV
Sbjct: 361 WNRAKVTSANEHTSAV 376
>gb|EDN63529.1| peroxisome-related protein [Saccharomyces cerevisiae YJM789]
Length = 376
Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats.
Identities = 371/376 (98%), Positives = 374/376 (99%)
Query: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKG IAKKPI
Sbjct: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGEIAKKPI 60
Query: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
VLQDNDDSDFTQNQGKVATATSTT+DRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE
Sbjct: 61 VLQDNDDSDFTQNQGKVATATSTTNDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
Query: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR
Sbjct: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
Query: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT
Sbjct: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
Query: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKE+ELKYKLP
Sbjct: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEHELKYKLP 300
Query: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL 360
TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYN ELAYEIISVGSGVTELLKL
Sbjct: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNLELAYEIISVGSGVTELLKL 360
Query: 361 WNRAKVTSANEHTSAV 376
WN+AKVTSANEHTSAV
Sbjct: 361 WNQAKVTSANEHTSAV 376
>ref|NP_015213.1| Peripheral peroxisomal membrane peroxin required for the regulation
of peroxisome size and maintenance, recruits GTPase
Rho1p to peroxisomes, induced by oleate, interacts with
homologous protein Pex27p; Pex25p [Saccharomyces
cerevisiae]
sp|Q02969|PEX25_YEAST Peroxisomal membrane protein PEX25 (Peroxin-25)
gb|AAB68249.1| Ypl112cp [Saccharomyces cerevisiae]
Length = 394
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 54/273 (19%)
Query: 126 LQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLR 185
L+H + ++ +LLL+ L NF K+ + QQLS FRY LRFG + + +F
Sbjct: 135 LRHPITVIKVLLLSL---LRNFDKKIDFISQQLSTFRYILRFGGTPFRVCSFLGKF---N 188
Query: 186 EMKKLHYK-DQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLM 244
+ +K +++ DQ +F + ++ +Y + DEL L +KL+ K
Sbjct: 189 KTRKCNFQIDQIKKIWFNEASLREFLDLYYGIFDELDLLYKLKIWTNKS---------FY 239
Query: 245 TFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAI------------- 290
+FV Q + W+ +L++ + + L + ++ L + NA+
Sbjct: 240 SFVSRQESLAWQYDILLSLKDHWLNLQSLQKRQLELEVQLKVQNNALLLSPILMHQAHKD 299
Query: 291 --KEYELKYKLPTNDKVN-------------LELRKNNITLDFYKIILNLLSN---LINI 332
+ ++ +L + VN ++ K + LD ++ + ++N ++N+
Sbjct: 300 DGSQSPIRKQLLNDLNVNNDAEVLIHKQLKAIKDEKTLVYLDIARLSFDCMANTSDILNL 359
Query: 333 KGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
K + Y ++S+GSG+T L+KLW K
Sbjct: 360 KTPKG------TYAVLSLGSGLTGLVKLWITTK 386
>gb|AAT92840.1| YPL112C [Saccharomyces cerevisiae]
Length = 394
Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 54/273 (19%)
Query: 126 LQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLR 185
L+H + ++ +LLL+ L NF K+ + QQLS FRY LRFG + + +F
Sbjct: 135 LRHPITVIKVLLLSL---LRNFDKKIDFISQQLSTFRYILRFGGTPFRVCSFLGKF---N 188
Query: 186 EMKKLHYK-DQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLM 244
+ +K +++ DQ +F + ++ +Y + DEL L +KL+ K
Sbjct: 189 KTRKCNFQIDQIKKIWFNEASLREFLDLYYGIFDELDLLYKLKIWTNKS---------FY 239
Query: 245 TFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAI------------- 290
+FV Q + W+ +L++ + + L + ++ L + NA+
Sbjct: 240 SFVSRQESLAWQYDILLSLKDHWLNLQSLQKRQLELEVQLKVQNNALLLSPILMHQAHKD 299
Query: 291 --KEYELKYKLPTNDKVN-------------LELRKNNITLDFYKIILNLLSN---LINI 332
+ ++ +L + VN ++ K + LD ++ + ++N ++N+
Sbjct: 300 DGSQSPIRKQLLNDLNVNNDAEVLIHKQLKAIKDEKTLVYLDIARLSFDCMANTSDILNL 359
Query: 333 KGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
K + Y ++S+GSG+T L+KLW K
Sbjct: 360 KTPKG------TYAVLSLGSGLTGLVKLWITTK 386
>gb|EDN61031.1| peroxin [Saccharomyces cerevisiae YJM789]
Length = 394
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 118/273 (43%), Gaps = 54/273 (19%)
Query: 126 LQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLR 185
L+H + ++ +LLL+ L NF K+ + QQLS FRY LRFG + + +F
Sbjct: 135 LRHPITVIKVLLLSL---LRNFDKKIDFISQQLSTFRYILRFGGTPFRVCSFLGKF---N 188
Query: 186 EMKKLHYK-DQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLM 244
+ +K +++ DQ +F + ++ +Y + DEL L +KL+ K
Sbjct: 189 KTRKCNFQIDQIKKIWFDEASLREFLDLYYGIFDELDLLYKLKIWTNKS---------FY 239
Query: 245 TFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE-LKYKLPTN 302
+FV Q + W+ +L++ + + L + ++ L + NA+ L ++ +
Sbjct: 240 SFVSRQESLAWQYDILLSLKDHWLNLQSLQKRQLELEVQLKVQNNALLLSPILMHQAHKD 299
Query: 303 DKVNLELRKNN---------------------------ITLDFYKIILNLLSN---LINI 332
D +RK + LD ++ + ++N ++N+
Sbjct: 300 DGSQSPIRKQLLNDLNVNNNAEVLIHKQLKAIKDEKTLVYLDIARLSFDCMANTSDILNL 359
Query: 333 KGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
K + Y ++S+GSG+T L+KLW K
Sbjct: 360 KTPKG------TYAVLSLGSGLTGLVKLWITTK 386
>ref|NP_986892.1| AGR226Wp [Ashbya gossypii ATCC 10895]
gb|AAS54716.1| AGR226Wp [Ashbya gossypii ATCC 10895]
Length = 323
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 66/302 (21%), Positives = 129/302 (42%), Gaps = 50/302 (16%)
Query: 97 EMKKRYVKKNCQAKFVFNTLEGKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQ 156
+ + R V+ + A + L G +++H + LL L L++ + F +K + V
Sbjct: 34 QYRTRLVQSDPTALARYARLAGAWSWGLLVRHPVTLLKLWLVSVAKQ---FEAKSQTVCT 90
Query: 157 QLSLFRYYLRFGN---FAINLYKIIKRFRWLREMKKLHYKDQSILF------YFKNFRFF 207
+S+FR +RFG+ A LY+ K R+ +KL D + + +
Sbjct: 91 NISIFRQMMRFGSTPFLARALYQ--KAAATYRQAQKLPAGDTAGVLQVVRGQWLNEPTLT 148
Query: 208 DIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNI 267
D++ +Y + DEL L + ++ K L FV + W+ +L++ K
Sbjct: 149 DVLYLYYGIMDELSLTYSF-GLWAHKG--------LYAFVARHEVLSWQYDILLSLKKGW 199
Query: 268 EQWRQL------------IRD---EIYLSIYNTSGNAIKEYELKYKL---PTNDKV---- 305
+ R++ +R +I +++ G + + +L L PT+D
Sbjct: 200 CRLREINAKILDLEIQCKVRQRAWDISQKLHSARGTSPVKRQLLRDLQLGPTSDMSLTAD 259
Query: 306 --NLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKLWNR 363
L ++ + +DF ++ +LL+N ++ R + Y +S+GSG+ KLW +
Sbjct: 260 LDALRQERSVLYVDFVRLTFDLLANSTDVFALRTPPGT---YAWLSLGSGMAGFYKLWTQ 316
Query: 364 AK 365
AK
Sbjct: 317 AK 318
>ref|XP_455112.1| unnamed protein product [Kluyveromyces lactis]
emb|CAG97819.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 431
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 76/332 (22%), Positives = 128/332 (38%), Gaps = 91/332 (27%)
Query: 110 KFVFNTLEGKEVCSKILQHTLGLL---------------------------SLLLLTRKI 142
K VF TL GK+ +KI ++ + +L +LL + R
Sbjct: 110 KAVFATLTGKDRIAKIFKYVIDILRIFIQRSMYYNNKDIDVDAYLKLFSKGNLLTILRNP 169
Query: 143 RL-----LNFSSKL-----RLVIQQLSLFRYYLRFGNFAINLY----KIIKRFRWLREMK 188
RL L+ SSKL LV QL +R +R G LY K+I F ++
Sbjct: 170 RLSGKLFLSSSSKLFLEKGALVSSQLGFYRQIMRCGGTPFRLYHWYQKLISTFYASQKSS 229
Query: 189 KLHYKDQSILFYFKNF----RFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLM 244
LH K L ++KN+ + I+ +Y + DEL+L +KL+ K +
Sbjct: 230 TLHSKG---LVWYKNWWNEESLSEFIDLYYGIMDELMLLYKLKLWSNKS---------MH 277
Query: 245 TFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIY--------------------- 283
+V + + W +L + KN E+ + + + E L I
Sbjct: 278 AWVSKHEALSWYYDIMLGLKKNWEKLQSIKQQEFELKIQYQVRQRALELSSKLNATPSVD 337
Query: 284 ---------NTSGNAIKEYELKYKLPTNDKV-NLELRKNNITLDFYKIILNLLSNLINIK 333
T + K+ L +L K+ N + K + D ++ + L++ ++
Sbjct: 338 SNKNTALIKQTIFESFKQDNLDLELEVVQKLKNYQYEKRIVKFDLTRLFFDFLADTTDVF 397
Query: 334 GKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
+ + Y I+S+ SGV KLW +AK
Sbjct: 398 SIKTPPGT---YAILSLCSGVLGFSKLWIQAK 426
>ref|XP_447712.1| hypothetical protein CAGL0I10879g [Candida glabrata CBS138]
emb|CAG60657.1| unnamed protein product [Candida glabrata CBS 138]
Length = 363
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 53/250 (21%), Positives = 107/250 (42%), Gaps = 44/250 (17%)
Query: 146 NFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLREMKKLHYKDQSI-LFYFKNF 204
NF K + QQLS +RY LRFG+ + I K+ L + K I +F
Sbjct: 122 NFEIKASYLSQQLSTYRYILRFGSSPFQVLNIWKK---LAQTYKEGLTASCIHKLWFNED 178
Query: 205 RFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAIN 264
++I + DEL+L +KL+ K ++++Q I WE + ++
Sbjct: 179 SIREVINLHNTVCDELVLLYKLKVWDHKD---------FYNWLEKQEAISWEADILFSLK 229
Query: 265 KNIEQWRQLIRD---------------EIYLSIYNTSGNAIKEY-ELKYKLPTND---KV 305
+ + +++ + E+ S++ + N + +L ++ +D +
Sbjct: 230 NKLIELQEMKQKRYEMLIDLRARRQALELSKSLHRSRENMSPIHNQLLHEFDNSDDWRRT 289
Query: 306 NLELRK---------NNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTE 356
LE+ + I LD ++ +L++N ++ R + Y + S+GSG++
Sbjct: 290 ELEISSQLEEYRHGISMIYLDIMRLSCDLIANTTDVLNMRVPRGT---YAVFSLGSGLSG 346
Query: 357 LLKLWNRAKV 366
L+KLW+ ++
Sbjct: 347 LMKLWHTTRM 356
>ref|YP_001124388.1| Amine oxidase, flavin-containing [Geobacillus thermodenitrificans
NG80-2]
gb|ABO65643.1| Amine oxidase, flavin-containing [Geobacillus thermodenitrificans
NG80-2]
Length = 480
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 153 LVIQQLSLFRY--YLRFGNF-------AINLYKIIKRFRWLREMKKLHYKDQSILFYFKN 203
+VI+QL + + YLR+ F AI++ K + E+ L + + + N
Sbjct: 164 IVIEQLDRYSFDTYLRYNPFGLRLSVGAIDMIKAVLSLEGFPELSFLGLLRELMTLFTPN 223
Query: 204 FRFFDII-------EAFY-NLTDELILFHKLQSMFGKKN--TSHANTNRLM 244
RF+ I+ +AF L DEL+ HK+Q + KN T HA +++
Sbjct: 224 MRFYKIVGGNDRLPKAFLPQLKDELLFSHKVQKIVQNKNSVTIHAIHTKIL 274
>ref|ZP_02864695.1| hypothetical protein CPC_2278 [Clostridium perfringens C str.
JGS1495]
gb|EDS80346.1| hypothetical protein CPC_2278 [Clostridium perfringens C str.
JGS1495]
Length = 392
Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 205 RFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAIN 264
+F DI + L D ++F+K + +FG++ T A T + E+ + +VL
Sbjct: 33 KFKDIYGSRSELGDVDLVFYKDRDIFGEEITVGAETINRKNVINERRFDGIDVLKDKKFF 92
Query: 265 KNIEQWRQLI--RDEIYLSIYNTSGNAIKEYELKYKLPTND-------KVNLELRKNNIT 315
+ I Q R D++ + + N GN I++ E+++K + KV+ +R NNI
Sbjct: 93 RGIYQTRDTFFEDDDVMVDVTNIYGNGIQKLEVRFKDKKTNTYETFKVKVDEYIRNNNID 152
Query: 316 LDFYK 320
YK
Sbjct: 153 KVTYK 157
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
gb|EDN63529.1| peroxisome-related protein [Saccharomyces ce... 618 e-175
ref|NP_014836.1| Peripheral peroxisomal membrane protein in... 618 e-175
gb|EDN61031.1| peroxin [Saccharomyces cerevisiae YJM789] 317 1e-84
ref|NP_015213.1| Peripheral peroxisomal membrane peroxin re... 314 9e-84
gb|AAT92840.1| YPL112C [Saccharomyces cerevisiae] 313 1e-83
Sequences not found previously or not previously below threshold:
ref|XP_447712.1| hypothetical protein CAGL0I10879g [Candida... 147 2e-33
ref|NP_986892.1| AGR226Wp [Ashbya gossypii ATCC 10895] >gi|... 138 1e-30
ref|XP_455112.1| unnamed protein product [Kluyveromyces lac... 137 1e-30
ref|XP_001646454.1| hypothetical protein Kpol_1048p26 [Vand... 128 9e-28
ref|XP_719137.1| peroxisome regulatory protein Pex25 [Candi... 82 6e-14
ref|XP_719254.1| peroxisome regulatory protein Pex25 [Candi... 82 7e-14
ref|XP_001383435.2| hypothetical protein PICST_56779 [Pichi... 79 6e-13
ref|XP_457136.1| hypothetical protein DEHA0B03894g [Debaryo... 72 1e-10
gb|ABG36525.1| Pex25p [Pichia angusta] 68 1e-09
ref|XP_001523976.1| conserved hypothetical protein [Loddero... 66 5e-09
ref|XP_001485441.1| hypothetical protein PGUG_03169 [Pichia... 59 7e-07
ref|NP_345727.1| DNA topoisomerase I [Streptococcus pneumon... 40 0.43
ref|NP_358734.1| DNA topoisomerase I [Streptococcus pneumon... 40 0.45
ref|ZP_01407769.1| hypothetical protein SpneT_02001810 [Str... 40 0.45
ref|YP_816589.1| DNA topoisomerase I [Streptococcus pneumon... 40 0.45
ref|ZP_01824014.1| DNA topoisomerase I [Streptococcus pneum... 40 0.46
ref|ZP_02717324.1| DNA topoisomerase I [Streptococcus pneum... 40 0.47
ref|ZP_01818400.1| DNA topoisomerase I [Streptococcus pneum... 39 0.67
ref|YP_001040065.1| serine proteases-like protein [Staphylo... 38 1.5
ref|ZP_01830742.1| DNA topoisomerase I [Streptococcus pneum... 37 1.9
ref|ZP_01820667.1| DNA topoisomerase I [Streptococcus pneum... 37 2.0
ref|YP_001835757.1| DNA topoisomerase I [Streptococcus pneu... 37 2.0
ref|YP_002738435.1| DNA topoisomerase I [Streptococcus pneu... 37 2.0
ref|ZP_01834618.1| DNA topoisomerase I [Streptococcus pneum... 37 2.0
ref|ZP_02715323.1| DNA topoisomerase I [Streptococcus pneum... 37 2.0
ref|YP_002740567.1| DNA topoisomerase I [Streptococcus pneu... 37 2.0
ref|NP_612284.1| ORF062L [Infectious spleen and kidney necr... 37 3.2
ref|XP_449653.1| hypothetical protein CAGL0M07029g [Candida... 37 3.4
ref|ZP_00366966.1| conserved hypothetical integral membrane... 36 4.0
ref|XP_001524758.1| hypothetical protein LELG_03790 [Lodder... 36 4.1
gb|AAT71873.1| putative DNA-binding protein [Rock bream iri... 36 4.2
gb|AAX82370.1| ORF61L [Orange-spotted grouper iridovirus] 36 4.6
ref|ZP_01826136.1| DNA topoisomerase I [Streptococcus pneum... 36 5.2
ref|NP_845093.1| hypothetical protein BA2743 [Bacillus anth... 35 8.5
ref|ZP_02213167.1| conserved hypothetical protein [Bacillus... 35 9.0
ref|YP_001802698.1| UPF0004-containing protein [Cyanothece ... 35 9.6
>gb|EDN63529.1| peroxisome-related protein [Saccharomyces cerevisiae YJM789]
Length = 376
Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats.
Identities = 371/376 (98%), Positives = 374/376 (99%)
Query: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKG IAKKPI
Sbjct: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGEIAKKPI 60
Query: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
VLQDNDDSDFTQNQGKVATATSTT+DRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE
Sbjct: 61 VLQDNDDSDFTQNQGKVATATSTTNDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
Query: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR
Sbjct: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
Query: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT
Sbjct: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
Query: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKE+ELKYKLP
Sbjct: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEHELKYKLP 300
Query: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL 360
TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYN ELAYEIISVGSGVTELLKL
Sbjct: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNLELAYEIISVGSGVTELLKL 360
Query: 361 WNRAKVTSANEHTSAV 376
WN+AKVTSANEHTSAV
Sbjct: 361 WNQAKVTSANEHTSAV 376
>ref|NP_014836.1| Peripheral peroxisomal membrane protein involved in controlling
peroxisome size and number, interacts with homologous
protein Pex25p; Pex27p [Saccharomyces cerevisiae]
sp|Q08580|PEX27_YEAST Peroxisomal membrane protein PEX27 (Peroxin-27)
emb|CAA99406.1| unnamed protein product [Saccharomyces cerevisiae]
gb|AAU09786.1| YOR193W [Saccharomyces cerevisiae]
Length = 376
Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats.
Identities = 376/376 (100%), Positives = 376/376 (100%)
Query: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI
Sbjct: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
Query: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE
Sbjct: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
Query: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR
Sbjct: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
Query: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT
Sbjct: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
Query: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP
Sbjct: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
Query: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL 360
TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL
Sbjct: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL 360
Query: 361 WNRAKVTSANEHTSAV 376
WNRAKVTSANEHTSAV
Sbjct: 361 WNRAKVTSANEHTSAV 376
>gb|EDN61031.1| peroxin [Saccharomyces cerevisiae YJM789]
Length = 394
Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 118/273 (43%), Gaps = 54/273 (19%)
Query: 126 LQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLR 185
L+H + ++ +LLL+ L NF K+ + QQLS FRY LRFG + + +F
Sbjct: 135 LRHPITVIKVLLLSL---LRNFDKKIDFISQQLSTFRYILRFGGTPFRVCSFLGKF---N 188
Query: 186 EMKKLHYK-DQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLM 244
+ +K +++ DQ +F + ++ +Y + DEL L +KL+ K
Sbjct: 189 KTRKCNFQIDQIKKIWFDEASLREFLDLYYGIFDELDLLYKLKIWTNKS---------FY 239
Query: 245 TFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE-LKYKLPTN 302
+FV Q + W+ +L++ + + L + ++ L + NA+ L ++ +
Sbjct: 240 SFVSRQESLAWQYDILLSLKDHWLNLQSLQKRQLELEVQLKVQNNALLLSPILMHQAHKD 299
Query: 303 DKVNLELRKN---------------------------NITLDFYKIILNLLSN---LINI 332
D +RK + LD ++ + ++N ++N+
Sbjct: 300 DGSQSPIRKQLLNDLNVNNNAEVLIHKQLKAIKDEKTLVYLDIARLSFDCMANTSDILNL 359
Query: 333 KGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
K + Y ++S+GSG+T L+KLW K
Sbjct: 360 KTPKG------TYAVLSLGSGLTGLVKLWITTK 386
>ref|NP_015213.1| Peripheral peroxisomal membrane peroxin required for the regulation
of peroxisome size and maintenance, recruits GTPase
Rho1p to peroxisomes, induced by oleate, interacts with
homologous protein Pex27p; Pex25p [Saccharomyces
cerevisiae]
sp|Q02969|PEX25_YEAST Peroxisomal membrane protein PEX25 (Peroxin-25)
gb|AAB68249.1| Ypl112cp [Saccharomyces cerevisiae]
Length = 394
Score = 314 bits (804), Expect = 9e-84, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 118/273 (43%), Gaps = 54/273 (19%)
Query: 126 LQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLR 185
L+H + ++ +LLL+ L NF K+ + QQLS FRY LRFG + + +F
Sbjct: 135 LRHPITVIKVLLLSL---LRNFDKKIDFISQQLSTFRYILRFGGTPFRVCSFLGKF---N 188
Query: 186 EMKKLHYK-DQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLM 244
+ +K +++ DQ +F + ++ +Y + DEL L +KL+ K
Sbjct: 189 KTRKCNFQIDQIKKIWFNEASLREFLDLYYGIFDELDLLYKLKIWTNKS---------FY 239
Query: 245 TFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE-LKYKLPTN 302
+FV Q + W+ +L++ + + L + ++ L + NA+ L ++ +
Sbjct: 240 SFVSRQESLAWQYDILLSLKDHWLNLQSLQKRQLELEVQLKVQNNALLLSPILMHQAHKD 299
Query: 303 DKVNLELRKN---------------------------NITLDFYKIILNLLSN---LINI 332
D +RK + LD ++ + ++N ++N+
Sbjct: 300 DGSQSPIRKQLLNDLNVNNDAEVLIHKQLKAIKDEKTLVYLDIARLSFDCMANTSDILNL 359
Query: 333 KGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
K + Y ++S+GSG+T L+KLW K
Sbjct: 360 KTPKG------TYAVLSLGSGLTGLVKLWITTK 386
>gb|AAT92840.1| YPL112C [Saccharomyces cerevisiae]
Length = 394
Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 118/273 (43%), Gaps = 54/273 (19%)
Query: 126 LQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLR 185
L+H + ++ +LLL+ L NF K+ + QQLS FRY LRFG + + +F
Sbjct: 135 LRHPITVIKVLLLSL---LRNFDKKIDFISQQLSTFRYILRFGGTPFRVCSFLGKF---N 188
Query: 186 EMKKLHYK-DQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLM 244
+ +K +++ DQ +F + ++ +Y + DEL L +KL+ K
Sbjct: 189 KTRKCNFQIDQIKKIWFNEASLREFLDLYYGIFDELDLLYKLKIWTNKS---------FY 239
Query: 245 TFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE-LKYKLPTN 302
+FV Q + W+ +L++ + + L + ++ L + NA+ L ++ +
Sbjct: 240 SFVSRQESLAWQYDILLSLKDHWLNLQSLQKRQLELEVQLKVQNNALLLSPILMHQAHKD 299
Query: 303 DKVNLELRKN---------------------------NITLDFYKIILNLLSN---LINI 332
D +RK + LD ++ + ++N ++N+
Sbjct: 300 DGSQSPIRKQLLNDLNVNNDAEVLIHKQLKAIKDEKTLVYLDIARLSFDCMANTSDILNL 359
Query: 333 KGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
K + Y ++S+GSG+T L+KLW K
Sbjct: 360 KTPKG------TYAVLSLGSGLTGLVKLWITTK 386
>ref|XP_447712.1| hypothetical protein CAGL0I10879g [Candida glabrata CBS138]
emb|CAG60657.1| unnamed protein product [Candida glabrata CBS 138]
Length = 363
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 112/276 (40%), Gaps = 57/276 (20%)
Query: 125 ILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWL 184
+L+H + + + ++ NF K + QQLS +RY LRFG+ + I K+
Sbjct: 104 MLRHPITIAKIWVVAMS---RNFEIKASYLSQQLSTYRYILRFGSSPFQVLNIWKKLAQT 160
Query: 185 RE---MKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTN 241
+ +F ++I + DEL+L +KL+ K
Sbjct: 161 YKEGLTASC-----IHKLWFNEDSIREVINLHNTVCDELVLLYKLKVWDHK--------- 206
Query: 242 RLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKE-------- 292
++++Q I WE + ++ + + +++ + + I A++
Sbjct: 207 DFYNWLEKQEAISWEADILFSLKNKLIELQEMKQKRYEMLIDLRARRQALELSKSLHRSR 266
Query: 293 ---YELKYKLP-----------TNDKVNLELRK-----NNITLDFYKIILNLLSN---LI 330
+ +L T +++ +L + + I LD ++ +L++N ++
Sbjct: 267 ENMSPIHNQLLHEFDNSDDWRRTELEISSQLEEYRHGISMIYLDIMRLSCDLIANTTDVL 326
Query: 331 NIKGKRDKYNSELAYEIISVGSGVTELLKLWNRAKV 366
N++ R Y + S+GSG++ L+KLW+ ++
Sbjct: 327 NMRVPRG------TYAVFSLGSGLSGLMKLWHTTRM 356
>ref|NP_986892.1| AGR226Wp [Ashbya gossypii ATCC 10895]
gb|AAS54716.1| AGR226Wp [Ashbya gossypii ATCC 10895]
Length = 323
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 59/303 (19%), Positives = 119/303 (39%), Gaps = 52/303 (17%)
Query: 97 EMKKRYVKKNCQAKFVFNTLEGKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQ 156
+ + R V+ + A + L G +++H + LL L L++ F +K + V
Sbjct: 34 QYRTRLVQSDPTALARYARLAGAWSWGLLVRHPVTLLKLWLVSVA---KQFEAKSQTVCT 90
Query: 157 QLSLFRYYLRFGNFAINLYKIIKRFRWL-REMKKLHYKDQSILF------YFKNFRFFDI 209
+S+FR +RFG+ + ++ R+ +KL D + + + D+
Sbjct: 91 NISIFRQMMRFGSTPFLARALYQKAAATYRQAQKLPAGDTAGVLQVVRGQWLNEPTLTDV 150
Query: 210 IEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQ 269
+ +Y + DEL L + K L FV + W+ +L++ K +
Sbjct: 151 LYLYYGIMDELSLTYSFGLWAHK---------GLYAFVARHEVLSWQYDILLSLKKGWCR 201
Query: 270 WRQLIRDEIYLSI-YNTSGNA--IKE--------YELKYKLPTNDKVN------------ 306
R++ + L I A I + +K +L + ++
Sbjct: 202 LREINAKILDLEIQCKVRQRAWDISQKLHSARGTSPVKRQLLRDLQLGPTSDMSLTADLD 261
Query: 307 -LELRKNNITLDFYKIILNLLSN---LINIKGKRDKYNSELAYEIISVGSGVTELLKLWN 362
L ++ + +DF ++ +LL+N + ++ Y +S+GSG+ KLW
Sbjct: 262 ALRQERSVLYVDFVRLTFDLLANSTDVFALRTPPG------TYAWLSLGSGMAGFYKLWT 315
Query: 363 RAK 365
+AK
Sbjct: 316 QAK 318
>ref|XP_455112.1| unnamed protein product [Kluyveromyces lactis]
emb|CAG97819.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 431
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 64/280 (22%), Positives = 107/280 (38%), Gaps = 57/280 (20%)
Query: 125 ILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLY----KIIKR 180
IL++ L L L+ +L F K LV QL +R +R G LY K+I
Sbjct: 165 ILRNP-RLSGKLFLSSSSKL--FLEKGALVSSQLGFYRQIMRCGGTPFRLYHWYQKLIST 221
Query: 181 FRWLREMKKLHYKDQS-ILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHAN 239
F ++ LH K ++ + I+ +Y + DEL+L +KL+ K
Sbjct: 222 FYASQKSSTLHSKGLVWYKNWWNEESLSEFIDLYYGIMDELMLLYKLKLWSNKS------ 275
Query: 240 TNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYELKYK 298
+ +V + + W +L + KN E+ + + + E L I Y A++
Sbjct: 276 ---MHAWVSKHEALSWYYDIMLGLKKNWEKLQSIKQQEFELKIQYQVRQRALELSSKLNA 332
Query: 299 LP-------------------TNDKVNLEL-----------RKNNITLDFYKIILNLLS- 327
P D ++LEL K + D ++ + L+
Sbjct: 333 TPSVDSNKNTALIKQTIFESFKQDNLDLELEVVQKLKNYQYEKRIVKFDLTRLFFDFLAD 392
Query: 328 --NLINIKGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
++ +IK Y I+S+ SGV KLW +AK
Sbjct: 393 TTDVFSIKTPPG------TYAILSLCSGVLGFSKLWIQAK 426
>ref|XP_001646454.1| hypothetical protein Kpol_1048p26 [Vanderwaltozyma polyspora DSM
70294]
gb|EDO18596.1| hypothetical protein Kpol_1048p26 [Vanderwaltozyma polyspora DSM
70294]
Length = 418
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 54/300 (18%), Positives = 101/300 (33%), Gaps = 70/300 (23%)
Query: 113 FNTLEGKEVCSK-ILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFA 171
FN L+G K ++ L + L+ + K+ + QLS FRY LRFG
Sbjct: 136 FNKLKGNYSLFKYFIKFPLTTIKFFLI---FSFKSVEKKISFINSQLSTFRYILRFGYLP 192
Query: 172 INLYKIIKRFRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFG 231
L + + + + + D + +Y++ DEL +KL
Sbjct: 193 FYLLPYLDKLKSIAKSPH-----TIGKIALNETFLQDTLNIYYSIFDELDTLYKLNLWSN 247
Query: 232 KKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAI 290
++ V W++ +LA+ N + L R E+ L + A+
Sbjct: 248 ---------DQFYNIVGRHEAYSWQLDILLALKNNWLSLKSLERKELELQLKLQFKEEAL 298
Query: 291 KEYELKY-----------------------KLPTNDKV-------------------NLE 308
+ K D V +++
Sbjct: 299 ELSNFYNNFNNDNDKNNNNNIINNNDNDDTKTEKPDSVISYSFSNSFSTSDIEQQLKSIK 358
Query: 309 LRKNNITLDFYKIILNLLSN---LINIKGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
+K + LD ++ +L++N + N+K Y I+S+ SG+T +K+W +
Sbjct: 359 DQKLIVNLDLVRLSFDLMANTTDVFNMKVPTG------TYSILSLCSGITGFIKIWINTR 412
>ref|XP_719137.1| peroxisome regulatory protein Pex25 [Candida albicans SC5314]
gb|EAL00242.1| potential peroxisome regulatory protein Pex25 [Candida albicans
SC5314]
Length = 539
Score = 82.3 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 55/268 (20%), Positives = 95/268 (35%), Gaps = 47/268 (17%)
Query: 128 HTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLREM 187
H + ++++ + L F K +I LS++R +LRFG + +I +F
Sbjct: 275 HPADFIKIIVI---LILSIFKQKAAGMINGLSMYRQFLRFGKTPFRIRDLIVKFHHNVFN 331
Query: 188 KKLHYKDQSILF-YFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTF 246
+ Q F + +Y + DE IL +KL + F
Sbjct: 332 NSSDNQVQINKSKIFDRKTLGQFLSLYYGINDESILLYKLNVLSN---------PDYKKF 382
Query: 247 VKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE----------- 294
V + I W LA+ E + L++ E+ L I A + +
Sbjct: 383 VSKHESIAWHCETWLALYNAYENLQNLLQQEMDLKIQIQVKNKAKQLSKQILLGGNAKGN 442
Query: 295 -----LKYKLPTNDKVNLEL---------RKNNITLDFYKIILNLLSN---LINIKGKRD 337
L + + T VN E +KNN +D YK + +L N + NI D
Sbjct: 443 DSGGLLGFNISTIPTVNSEDAKNLTQIQFKKNNAWIDIYKNLSDLAFNTYTVFNIALPFD 502
Query: 338 KYNSELAYEIISVGSGVTELLKLWNRAK 365
+ + + + V +KL+ K
Sbjct: 503 TWQIW-----MGISASVLSTIKLYRETK 525
>ref|XP_719254.1| peroxisome regulatory protein Pex25 [Candida albicans SC5314]
gb|EAL00364.1| potential peroxisome regulatory protein Pex25 [Candida albicans
SC5314]
Length = 539
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 55/268 (20%), Positives = 95/268 (35%), Gaps = 47/268 (17%)
Query: 128 HTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLREM 187
H + ++++ + L F K +I LS++R +LRFG + +I +F
Sbjct: 275 HPADFIKIIVI---LILSIFKQKAAGMINGLSMYRQFLRFGKTPFRIRDLIVKFHHNVFN 331
Query: 188 KKLHYKDQSILF-YFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTF 246
+ Q F + +Y + DE IL +KL + F
Sbjct: 332 NSSDNQVQINKSKIFDRKTLGQFLSLYYGINDESILLYKLNVLSN---------PDYKKF 382
Query: 247 VKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE----------- 294
V + I W LA+ E + L++ E+ L I A + +
Sbjct: 383 VSKHESIAWHCETWLALYNAYENLQNLLQQEMDLKIQIQVKNKAKQLSKQILLGGNAKGN 442
Query: 295 -----LKYKLPTNDKVNLEL---------RKNNITLDFYKIILNLLSN---LINIKGKRD 337
L + + T VN E +KNN +D YK + +L N + NI D
Sbjct: 443 DSGGLLGFNISTIPTVNSEDAKNLTQIQFKKNNAWIDIYKNLSDLAFNTYTVFNIALPFD 502
Query: 338 KYNSELAYEIISVGSGVTELLKLWNRAK 365
+ + + + V +KL+ K
Sbjct: 503 TWQIW-----MGISASVLSTIKLYRETK 525
>ref|XP_001383435.2| hypothetical protein PICST_56779 [Pichia stipitis CBS 6054]
gb|ABN65406.2| predicted protein [Pichia stipitis CBS 6054]
Length = 401
Score = 78.9 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 49/264 (18%), Positives = 101/264 (38%), Gaps = 47/264 (17%)
Query: 123 SKILQHT---LGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIK 179
S L+H + ++ +L+ + F + ++ LS++R +LRFG + +
Sbjct: 157 SNFLKHPSDFIRIIVILVCSL------FRERFAGMVSGLSMYRQFLRFGKTPFRIRGLAN 210
Query: 180 RFRWLREMKKLHYKDQSILFYFKNF----RFFDIIEAFYNLTDELILFHKLQSMFGKKNT 235
+ + YK+ + + N ++ +Y + DE +L +KL+ + +
Sbjct: 211 KL-----SSNITYKNNDVKINYPNIMNRKTLGEVFSLYYGINDESLLLYKLKFLSNES-- 263
Query: 236 SHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE 294
FV W LA+ E + L + E+ + I A +
Sbjct: 264 -------YHKFVSRHESFGWYSETWLALYNAYENLQNLTQQEMDVKISIQVKSKAKLLSK 316
Query: 295 -------LKYKLPTNDKV--NLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAY 345
+ + KV +++ +KNN LD YK I +L+ N + + L +
Sbjct: 317 QLLGSGAVSSSSNEDAKVLSDIQFKKNNAWLDIYKNISDLIFNTYTV------FRLPLPF 370
Query: 346 EIISVGSGVT----ELLKLWNRAK 365
+ I + G++ +KL+ K
Sbjct: 371 DTIQIWMGISASVLSTVKLYRETK 394
>ref|XP_457136.1| hypothetical protein DEHA0B03894g [Debaryomyces hansenii CBS767]
emb|CAG85129.1| unnamed protein product [Debaryomyces hansenii CBS767]
Length = 497
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 93/262 (35%), Gaps = 40/262 (15%)
Query: 126 LQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRF--RW 183
L H + +++L + F S+L LSLFR +LRFG + + R
Sbjct: 244 LHHPRDFIKIIVL---LACSIFRSRLSGTAGGLSLFRQFLRFGQSPFKTRRFKNKLVSRT 300
Query: 184 LREMKKLHYKDQSILF--YFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTN 241
K Y F DI +Y++ DE L +K+ K
Sbjct: 301 TIATKSGDYMIDVSSIGKCFTKDVLGDIFSLYYSVFDEAGLLYKMNFFRSKS-------- 352
Query: 242 RLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE------ 294
+ + W +L I + ++L + E+ L I A +
Sbjct: 353 -FHKVILRHESLAWYYETLLGIYNAYGRLQKLSQQEMDLKIQIQVKSKARLLSKQLLGAS 411
Query: 295 ----LKYKLPTNDKVNLE---LRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEI 347
L ++ T D L+ +K N +D YK + + + N + +N L ++
Sbjct: 412 SIEGLSHEDDTKDAQQLKEIQFKKYNSYIDIYKWLSDFIFNTYTV------FNMALPFDT 465
Query: 348 ISVGSGVT----ELLKLWNRAK 365
+ + G++ +LKL+ +
Sbjct: 466 LQLWMGISASSLSILKLYRETR 487
>gb|ABG36525.1| Pex25p [Pichia angusta]
Length = 425
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 93/260 (35%), Gaps = 35/260 (13%)
Query: 138 LTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFR----WLREMKKLHYK 193
L + L F ++ + + LS++R LR G + K++ R L+ +K K
Sbjct: 169 LIVVLFLGQFEARFVGLTKMLSVYRQMLRAGTVPTKVLKMLSRISESVGLLQSSEKASTK 228
Query: 194 DQSILF-YFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHY 252
Q + + +I +Y DE +L +K+ + K T F
Sbjct: 229 LQRLKSDWCNFKSLGEICALYYAWFDESLLAYKIGLLDEKT------TPNYRKFAVRHEA 282
Query: 253 ILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIK--------EYELKYKLP--- 300
+ W IL + E+ QL E L I Y A + + + P
Sbjct: 283 LAWYTNIILGLRAQFEKLSQLSNKENSLKINYQVKQRAKRLVSTIKPDQSPISLYGPLEV 342
Query: 301 TNDKVNLEL---------RKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVG 351
T+ K L+ K + L+ K++ + + +N+ + L + +G
Sbjct: 343 TDTKTQLQYSTELKKISKEKYMVQLEILKLLCDFAYDTVNVFHLKIDEPLHLLF---GLG 399
Query: 352 SGVTELLKLWNRAKVTSANE 371
+G L K+W K + E
Sbjct: 400 AGAISLSKIWIAEKEKTEKE 419
>ref|XP_001523976.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gb|EDK46608.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 571
Score = 65.8 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 18/157 (11%)
Query: 126 LQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLR 185
L+H ++++ F ++ +I LS++R +LRFG ++ ++K+ +
Sbjct: 305 LKHPQDFFRIIVILVCSI---FKLRVAGMINGLSMYRQFLRFGKTPFRIHDLVKKVQENV 361
Query: 186 EMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMT 245
K ++ + F + +Y + DE IL +KL + +
Sbjct: 362 HSKTINKQ------LFSRSTLSQVASLYYGINDESILLYKLNVLTN---------PWYKS 406
Query: 246 FVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI 282
V W + +A+ E+ +L + I L I
Sbjct: 407 IVSRHESYAWYLETWIALYNAYEKLGKLSEERINLQI 443
>ref|XP_001485441.1| hypothetical protein PGUG_03169 [Pichia guilliermondii ATCC 6260]
gb|EDK39072.1| hypothetical protein PGUG_03169 [Pichia guilliermondii ATCC 6260]
Length = 178
Score = 58.8 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 26/152 (17%)
Query: 205 RFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAIN 264
D+ +Y + DE++L KL+ K + W +LA+
Sbjct: 5 TLGDLFSLYYGIHDEILLLFKLKFFTSKS---------FQQYAARHESRAWYYETLLALY 55
Query: 265 KNIEQWRQLIRDEIYLSIY------------NTSGNAIKEYELKYKLPTNDKV--NLELR 310
E+ +QL + E+ + I G + Y+ PT+ +++ +
Sbjct: 56 NTYERLQQLSQQEMDMRIQIQVKQRAKLLSKQLLGGSQLLNSSHYEDPTDLNQLKDIQFK 115
Query: 311 KNNITLDFYKIILNLLSN---LINIKGKRDKY 339
K N +D YK + + N + N+K D +
Sbjct: 116 KYNAYIDIYKWLADFAFNTYTVFNLKLPFDTF 147
>ref|NP_345727.1| DNA topoisomerase I [Streptococcus pneumoniae TIGR4]
gb|AAK75367.1| DNA topoisomerase I [Streptococcus pneumoniae TIGR4]
Length = 699
Score = 39.6 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS N +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNNEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|NP_358734.1| DNA topoisomerase I [Streptococcus pneumoniae R6]
gb|AAK99944.1| DNA topoisomerase I [Streptococcus pneumoniae R6]
Length = 701
Score = 39.6 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS N +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 236 TSNNEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 295
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 296 QQLYEGINIGSGVQGLI 312
>ref|ZP_01407769.1| hypothetical protein SpneT_02001810 [Streptococcus pneumoniae
TIGR4]
Length = 693
Score = 39.6 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS N +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNNEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|YP_816589.1| DNA topoisomerase I [Streptococcus pneumoniae D39]
gb|ABJ54911.1| DNA topoisomerase I [Streptococcus pneumoniae D39]
Length = 695
Score = 39.6 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS N +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNNEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|ZP_01824014.1| DNA topoisomerase I [Streptococcus pneumoniae SP9-BS68]
ref|ZP_02713286.1| DNA topoisomerase I [Streptococcus pneumoniae SP195]
gb|EDK77899.1| DNA topoisomerase I [Streptococcus pneumoniae SP9-BS68]
gb|EDT93088.1| DNA topoisomerase I [Streptococcus pneumoniae SP195]
Length = 695
Score = 39.6 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS N +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNNEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|ZP_02717324.1| DNA topoisomerase I [Streptococcus pneumoniae CDC3059-06]
gb|EDT97271.1| DNA topoisomerase I [Streptococcus pneumoniae CDC3059-06]
Length = 695
Score = 39.6 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS N +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNNEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|ZP_01818400.1| DNA topoisomerase I [Streptococcus pneumoniae SP3-BS71]
gb|EDK73724.1| DNA topoisomerase I [Streptococcus pneumoniae SP3-BS71]
Length = 695
Score = 38.8 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS + +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNDEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELLKLWNR--AKVTSANEHTSA 375
+ YE I++GSGV L+ +++S ++ +A
Sbjct: 290 QQLYEGINIGSGVQGLITYMRTDSTRISSVAQNEAA 325
>ref|YP_001040065.1| serine proteases-like protein [Staphylothermus marinus F1]
gb|ABN69157.1| serine proteases-like protein [Staphylothermus marinus F1]
Length = 655
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 174 LYKIIKRFRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKK 233
+ II +F W ++ ++ ++S F F I+ + + + + ++L+ + +
Sbjct: 252 VLNIIDKFAWENYVRSMNLFNESKKL-FNQLDLFTRIQLYDQIKNVEKMNYQLKQLIDE- 309
Query: 234 NTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEI 278
N S A+ +KE YI W +IL N+E +I + I
Sbjct: 310 NLSIASFIYSNKVLKENIYINWLYKSILG-KLNLENTISMINETI 353
>ref|ZP_01830742.1| DNA topoisomerase I [Streptococcus pneumoniae SP18-BS74]
gb|EDK68343.1| DNA topoisomerase I [Streptococcus pneumoniae SP18-BS74]
Length = 695
Score = 37.3 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS + +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNDEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|ZP_01820667.1| DNA topoisomerase I [Streptococcus pneumoniae SP6-BS73]
ref|ZP_01827565.1| DNA topoisomerase I [Streptococcus pneumoniae SP14-BS69]
ref|ZP_01833387.1| DNA topoisomerase I [Streptococcus pneumoniae SP19-BS75]
ref|ZP_02721631.1| DNA topoisomerase I [Streptococcus pneumoniae MLV-016]
gb|EDK66237.1| DNA topoisomerase I [Streptococcus pneumoniae SP14-BS69]
gb|EDK70579.1| DNA topoisomerase I [Streptococcus pneumoniae SP19-BS75]
gb|EDK76344.1| DNA topoisomerase I [Streptococcus pneumoniae SP6-BS73]
gb|EDT98678.1| DNA topoisomerase I [Streptococcus pneumoniae MLV-016]
Length = 695
Score = 37.3 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS + +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNDEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|YP_001835757.1| DNA topoisomerase I [Streptococcus pneumoniae CGSP14]
gb|ACB90292.1| DNA topoisomerase I [Streptococcus pneumoniae CGSP14]
Length = 701
Score = 37.3 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS + +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 236 TSNDEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 295
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 296 QQLYEGINIGSGVQGLI 312
>ref|YP_002738435.1| DNA topoisomerase I [Streptococcus pneumoniae P1031]
gb|ACO21912.1| DNA topoisomerase I [Streptococcus pneumoniae P1031]
Length = 695
Score = 37.3 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS + +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNDEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|ZP_01834618.1| DNA topoisomerase I [Streptococcus pneumoniae SP23-BS72]
gb|EDK82105.1| DNA topoisomerase I [Streptococcus pneumoniae SP23-BS72]
Length = 695
Score = 37.3 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS + +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNDEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|ZP_02715323.1| DNA topoisomerase I [Streptococcus pneumoniae CDC0288-04]
ref|YP_001694689.1| DNA topoisomerase I [Streptococcus pneumoniae Hungary19A-6]
gb|ACA37265.1| DNA topoisomerase I [Streptococcus pneumoniae Hungary19A-6]
gb|EDT94934.1| DNA topoisomerase I [Streptococcus pneumoniae CDC0288-04]
Length = 695
Score = 37.3 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS + +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNDEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|YP_002740567.1| DNA topoisomerase I [Streptococcus pneumoniae 70585]
gb|ACO16687.1| DNA topoisomerase I [Streptococcus pneumoniae 70585]
Length = 695
Score = 37.3 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS + +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNDEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|NP_612284.1| ORF062L [Infectious spleen and kidney necrosis virus]
gb|AAL98786.1|AF371960_62 ORF062L [infectious spleen and kidney necrosis virus]
Length = 1208
Score = 36.5 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 21/123 (17%)
Query: 189 KLHYK---DQSILFYFKNFRFFDIIEAFYNLTDE-------LIL------FHKLQSMFGK 232
KL Y+ DQ + Y + F D E F L E L L F+ L+SM
Sbjct: 1036 KLGYQVTPDQDMREYLRQFTIRDFGELFKKLDPEGRVFQTPLDLKMYDGYFYTLESMLDY 1095
Query: 233 KNTSHANTNRLMTFVKEQHYILW--EVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAI 290
+TS F Q YI + L Q +I++EI + +T A+
Sbjct: 1096 IDTSTGELRTTQQF---QDYIRLNPQRNTRLRTGPEWTQVVDVIQNEIQQQMLSTQLGAL 1152
Query: 291 KEY 293
++
Sbjct: 1153 DQH 1155
>ref|XP_449653.1| hypothetical protein CAGL0M07029g [Candida glabrata CBS138]
emb|CAG62629.1| unnamed protein product [Candida glabrata CBS 138]
Length = 838
Score = 36.5 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 231 GKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAI 290
G ++ +N+ +Q YI W+ L LA++ +++I DE+ I+ T A
Sbjct: 741 GLSLAANPVSNKFY----DQAYI-WQFLASLALSGK-LNHQRIIIDEVRDEIFGTINTA- 793
Query: 291 KEYELKYKLPTNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDK 338
E KLPT D+ R+ + D LNL N++ + + +
Sbjct: 794 ---EQLKKLPTEDQNGSLYRREKLYQD-----LNLFLNVMGLVSRDGE 833
>ref|ZP_00366966.1| conserved hypothetical integral membrane protein, putative
[Campylobacter coli RM2228]
gb|EAL57612.1| conserved hypothetical integral membrane protein, putative
[Campylobacter coli RM2228]
Length = 341
Score = 36.1 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 8/129 (6%)
Query: 209 IIEAFYNLTDELILFHKLQSMFG-KKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNI 267
+I + L D + F K Q F K M F+++Q +E + + +NI
Sbjct: 121 MIPIVFELQDNFVNFKKTQVKFNYKTGEFGQRFLEWMIFIEKQESDRYENIIMYHPKRNI 180
Query: 268 EQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLPTNDKVNLELRKNNITLDFYKIILNLLS 327
E QLI I + E +KL N E + +F K+I+N
Sbjct: 181 EDKEQLI-------IAKEATAQRNEDSFAFKLSNGKMYNFENGQTLFIGNFDKLIVNTQF 233
Query: 328 NLINIKGKR 336
N N++ K+
Sbjct: 234 NDQNLQTKK 242
>ref|XP_001524758.1| hypothetical protein LELG_03790 [Lodderomyces elongisporus NRRL
YB-4239]
gb|EDK45611.1| hypothetical protein LELG_03790 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 650
Score = 36.1 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 146 NFSSKLRLVIQQL-SLFRYYLRFGNFAINLYKIIKRFRWLREMKKLHYKDQSILFYFKNF 204
+F + R++ +Q+ S+F Y I F ++ + + +Y+++ Y+ N
Sbjct: 334 HFQKRQRIIQKQMKSIFIY-------PFAYC-FIWLFPFILQTTQFNYEEEHKPVYWLNV 385
Query: 205 RFFDIIEAFYNLTDELILFHKLQSM 229
++ F+ D ++ F++ +
Sbjct: 386 -LGAFMQPFFGFVDSMVFFYRERPW 409
>gb|AAT71873.1| putative DNA-binding protein [Rock bream iridovirus]
Length = 1253
Score = 36.1 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 21/123 (17%)
Query: 189 KLHYK---DQSILFYFKNFRFFDIIEAFYNLTDE-------LIL------FHKLQSMFGK 232
KL Y+ DQ + Y + F D E F L E L L F+ L+SM
Sbjct: 1081 KLGYQVTPDQDMREYLRQFTIRDFGELFKKLDPEGQVFQTPLDLKMYDGYFYTLESMLDY 1140
Query: 233 KNTSHANTNRLMTFVKEQHYILW--EVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAI 290
+ S F Q YI + L Q +I++EI I +T A+
Sbjct: 1141 IDPSTGELRTTQQF---QDYIRLNPQRNTRLRTGPEWTQVVDVIQNEIQQQILHTQLGAL 1197
Query: 291 KEY 293
++
Sbjct: 1198 DQH 1200
>gb|AAX82370.1| ORF61L [Orange-spotted grouper iridovirus]
Length = 372
Score = 36.1 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 21/123 (17%)
Query: 189 KLHYK---DQSILFYFKNFRFFDIIEAFYNLTDE-------LIL------FHKLQSMFGK 232
KL Y+ DQ + Y + F D E F L E L L F+ L+SM
Sbjct: 200 KLGYQVTPDQDMREYLRQFTIRDFGELFKKLDPEGQVFQTPLDLKMYDGYFYTLESMLDY 259
Query: 233 KNTSHANTNRLMTFVKEQHYILW--EVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAI 290
+ S F Q YI + L Q +I++EI I +T A+
Sbjct: 260 IDPSTGELRTTQQF---QDYIRLNPQRNTRLRTGPEWTQVVDVIQNEIQQQILHTQLGAL 316
Query: 291 KEY 293
++
Sbjct: 317 DQH 319
>ref|ZP_01826136.1| DNA topoisomerase I [Streptococcus pneumoniae SP11-BS70]
gb|EDK62582.1| DNA topoisomerase I [Streptococcus pneumoniae SP11-BS70]
Length = 415
Score = 36.1 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 285 TSGNAIKE--YELKYKLPTNDKVNLELRKNNITLDFYKIILNL-LSNLINIKGKRDKYNS 341
TS + +KE L K + D+V+ + RK N L + + + +N IN + ++ +
Sbjct: 230 TSNDEVKEVLSRLTSKDFSVDQVDKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVA 289
Query: 342 ELAYEIISVGSGVTELL 358
+ YE I++GSGV L+
Sbjct: 290 QQLYEGINIGSGVQGLI 306
>ref|NP_845093.1| hypothetical protein BA2743 [Bacillus anthracis str. Ames]
ref|YP_019383.1| hypothetical protein GBAA2743 [Bacillus anthracis str. 'Ames
Ancestor']
ref|YP_028816.1| hypothetical protein BAS2557 [Bacillus anthracis str. Sterne]
ref|ZP_02390108.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
ref|ZP_02606942.1| hypothetical protein BantT_04805 [Bacillus anthracis
Tsiankovskii-I]
ref|ZP_02932443.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
sp|Q81PQ8|Y2743_BACAN UPF0421 protein BA_2743/GBAA2743/BAS2557
gb|AAP26579.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gb|AAT31858.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gb|AAT54867.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gb|EDR94715.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gb|EDT69573.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
Length = 355
Score = 35.3 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 208 DIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNI 267
+I E + L DEL Q K + +H N+ + IL+EV L+I+ +
Sbjct: 282 EIDEEHFKLIDELDK----QFWTNKNDLAHCKPNQYHHHFSSKSIILFEV---LSIHDML 334
Query: 268 EQWRQL 273
E+ +Q+
Sbjct: 335 EELKQI 340
>ref|ZP_02213167.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
ref|ZP_02396040.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
ref|ZP_02894914.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gb|EDR20750.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gb|EDR89677.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gb|EDS99110.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
Length = 360
Score = 35.0 bits (79), Expect = 9.0, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 208 DIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNI 267
+I E + L DEL Q K + +H N+ + IL+EV L+I+ +
Sbjct: 287 EIDEEHFKLIDELDK----QFWTNKNDLAHCKPNQYHHHFSSKSIILFEV---LSIHDML 339
Query: 268 EQWRQL 273
E+ +Q+
Sbjct: 340 EELKQI 345
>ref|YP_001802698.1| UPF0004-containing protein [Cyanothece sp. ATCC 51142]
gb|ACB50632.1| UPF0004-containing protein [Cyanothece sp. ATCC 51142]
Length = 518
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 232 KKNTSHANTNRLMTFVKEQHYILWE-VLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAI 290
K+ T + + + Q+ +WE L + A N++ ++RQ++RDEI + N +
Sbjct: 454 KRKTRWKFWHHFFSIL-RQNTPVWEHYLTVCAHNEHFLEYRQIVRDEIEQQLQEF--NRL 510
Query: 291 KEYELK 296
+K
Sbjct: 511 SRKPIK 516
Searching..................................................done
Results from round 3
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
gb|EDN63529.1| peroxisome-related protein [Saccharomyces ce... 554 e-156
ref|NP_014836.1| Peripheral peroxisomal membrane protein in... 551 e-155
ref|NP_986892.1| AGR226Wp [Ashbya gossypii ATCC 10895] >gi|... 295 4e-78
gb|EDN61031.1| peroxin [Saccharomyces cerevisiae YJM789] 266 2e-69
ref|NP_015213.1| Peripheral peroxisomal membrane peroxin re... 265 3e-69
gb|AAT92840.1| YPL112C [Saccharomyces cerevisiae] 265 4e-69
ref|XP_447712.1| hypothetical protein CAGL0I10879g [Candida... 259 3e-67
ref|XP_001383435.2| hypothetical protein PICST_56779 [Pichi... 255 3e-66
ref|XP_719137.1| peroxisome regulatory protein Pex25 [Candi... 253 1e-65
ref|XP_719254.1| peroxisome regulatory protein Pex25 [Candi... 253 2e-65
ref|XP_457136.1| hypothetical protein DEHA0B03894g [Debaryo... 251 7e-65
ref|XP_455112.1| unnamed protein product [Kluyveromyces lac... 247 9e-64
gb|ABG36525.1| Pex25p [Pichia angusta] 247 1e-63
ref|XP_001646454.1| hypothetical protein Kpol_1048p26 [Vand... 227 1e-57
ref|XP_001523976.1| conserved hypothetical protein [Loddero... 209 3e-52
ref|XP_001485441.1| hypothetical protein PGUG_03169 [Pichia... 169 4e-40
Sequences not found previously or not previously below threshold:
ref|XP_001485442.1| hypothetical protein PGUG_03171 [Pichia... 56 3e-06
ref|XP_001011230.1| hypothetical protein TTHERM_00145910 [T... 49 7e-04
ref|XP_001485931.1| hypothetical protein PGUG_01602 [Pichia... 46 0.005
ref|XP_503276.1| hypothetical protein [Yarrowia lipolytica]... 44 0.018
ref|XP_460264.1| hypothetical protein DEHA0E23463g [Debaryo... 43 0.048
ref|XP_001014394.2| hypothetical protein TTHERM_00522160 [T... 38 0.88
ref|ZP_04019073.1| exonuclease SbcC family protein [Finegol... 38 0.95
ref|XP_454263.1| unnamed protein product [Kluyveromyces lac... 38 1.4
gb|EEK07414.1| hypothetical protein BmurDRAFT_15280 [Brachy... 38 1.5
dbj|BAD95474.1| Cryhime1 [Paenibacillus popilliae] 37 2.2
ref|XP_001019375.1| hypothetical protein TTHERM_00389700 [T... 37 2.6
ref|XP_001010669.1| hypothetical protein TTHERM_00112740 [T... 37 2.6
ref|XP_001709765.1| Coiled-coil protein [Giardia lamblia AT... 36 4.0
ref|YP_001488988.1| two-component response regulator [Arcob... 36 4.2
ref|NP_348932.1| Polysaccharide deacetylase-like protein; X... 36 5.3
dbj|BAD15303.1| parasporal crystal protein [Paenibacillus l... 36 5.5
ref|XP_001425614.1| hypothetical protein GSPATT00029252001 ... 36 5.5
ref|NP_722265.1| putative periplasmic sugar-binding protein... 36 6.9
ref|XP_001351113.1| IBR domain protein, putative [Plasmodiu... 35 8.1
sp|Q736X4|Y2776_BACC1 UPF0421 protein BCE_2776 35 8.3
ref|YP_001394859.1| KdpD [Clostridium kluyveri DSM 555] >gi... 35 9.0
ref|ZP_02600723.1| hypothetical protein Bcer0_05480 [Bacill... 35 9.3
ref|YP_500154.1| hypothetical protein SAOUHSC_01641 [Staphy... 35 9.5
ref|YP_895262.1| hypothetical protein BALH_2468 [Bacillus t... 35 9.8
>gb|EDN63529.1| peroxisome-related protein [Saccharomyces cerevisiae YJM789]
Length = 376
Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats.
Identities = 371/376 (98%), Positives = 374/376 (99%)
Query: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKG IAKKPI
Sbjct: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGEIAKKPI 60
Query: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
VLQDNDDSDFTQNQGKVATATSTT+DRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE
Sbjct: 61 VLQDNDDSDFTQNQGKVATATSTTNDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
Query: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR
Sbjct: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
Query: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT
Sbjct: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
Query: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKE+ELKYKLP
Sbjct: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEHELKYKLP 300
Query: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL 360
TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYN ELAYEIISVGSGVTELLKL
Sbjct: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNLELAYEIISVGSGVTELLKL 360
Query: 361 WNRAKVTSANEHTSAV 376
WN+AKVTSANEHTSAV
Sbjct: 361 WNQAKVTSANEHTSAV 376
>ref|NP_014836.1| Peripheral peroxisomal membrane protein involved in controlling
peroxisome size and number, interacts with homologous
protein Pex25p; Pex27p [Saccharomyces cerevisiae]
sp|Q08580|PEX27_YEAST Peroxisomal membrane protein PEX27 (Peroxin-27)
emb|CAA99406.1| unnamed protein product [Saccharomyces cerevisiae]
gb|AAU09786.1| YOR193W [Saccharomyces cerevisiae]
Length = 376
Score = 551 bits (1419), Expect = e-155, Method: Composition-based stats.
Identities = 376/376 (100%), Positives = 376/376 (100%)
Query: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI
Sbjct: 1 MTSDPVNTNISSPTLTDRNADESWELLKREFNTLFSNLKTDSKEEGNFTDNKGVIAKKPI 60
Query: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE
Sbjct: 61 VLQDNDDSDFTQNQGKVATATSTTSDRSFKRTLGSIEMKKRYVKKNCQAKFVFNTLEGKE 120
Query: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR
Sbjct: 121 VCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKR 180
Query: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT
Sbjct: 181 FRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
Query: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP
Sbjct: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
Query: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL 360
TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL
Sbjct: 301 TNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKL 360
Query: 361 WNRAKVTSANEHTSAV 376
WNRAKVTSANEHTSAV
Sbjct: 361 WNRAKVTSANEHTSAV 376
>ref|NP_986892.1| AGR226Wp [Ashbya gossypii ATCC 10895]
gb|AAS54716.1| AGR226Wp [Ashbya gossypii ATCC 10895]
Length = 323
Score = 295 bits (756), Expect = 4e-78, Method: Composition-based stats.
Identities = 59/303 (19%), Positives = 118/303 (38%), Gaps = 52/303 (17%)
Query: 97 EMKKRYVKKNCQAKFVFNTLEGKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQ 156
+ + R V+ + A + L G +++H + LL L L++ F +K + V
Sbjct: 34 QYRTRLVQSDPTALARYARLAGAWSWGLLVRHPVTLLKLWLVSVA---KQFEAKSQTVCT 90
Query: 157 QLSLFRYYLRFGNFAINLYKIIKRFRWL-REMKKLHYKDQSILF------YFKNFRFFDI 209
+S+FR +RFG+ + ++ R+ +KL D + + + D+
Sbjct: 91 NISIFRQMMRFGSTPFLARALYQKAAATYRQAQKLPAGDTAGVLQVVRGQWLNEPTLTDV 150
Query: 210 IEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQ 269
+ +Y + DEL L + K L FV + W+ +L++ K +
Sbjct: 151 LYLYYGIMDELSLTYSFGLWAHK---------GLYAFVARHEVLSWQYDILLSLKKGWCR 201
Query: 270 WRQLIRDEIYLSI-YNTSGNA----IKE------YELKYKLPTNDKVN------------ 306
R++ + L I A K +K +L + ++
Sbjct: 202 LREINAKILDLEIQCKVRQRAWDISQKLHSARGTSPVKRQLLRDLQLGPTSDMSLTADLD 261
Query: 307 -LELRKNNITLDFYKIILNLLSN---LINIKGKRDKYNSELAYEIISVGSGVTELLKLWN 362
L ++ + +DF ++ +LL+N + ++ Y +S+GSG+ KLW
Sbjct: 262 ALRQERSVLYVDFVRLTFDLLANSTDVFALRTPPG------TYAWLSLGSGMAGFYKLWT 315
Query: 363 RAK 365
+AK
Sbjct: 316 QAK 318
>gb|EDN61031.1| peroxin [Saccharomyces cerevisiae YJM789]
Length = 394
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 62/300 (20%), Positives = 122/300 (40%), Gaps = 54/300 (18%)
Query: 99 KKRYVKKNCQAKFVFNTLEGKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQL 158
K+ + + + L+H + ++ +LLL+ L NF K+ + QQL
Sbjct: 108 KRNLTVLDPSVLTYYTKILKNLTVKVALRHPITVIKVLLLSL---LRNFDKKIDFISQQL 164
Query: 159 SLFRYYLRFGNFAINLYKIIKRFRWLREMKKLHYK-DQSILFYFKNFRFFDIIEAFYNLT 217
S FRY LRFG + + +F + +K +++ DQ +F + ++ +Y +
Sbjct: 165 STFRYILRFGGTPFRVCSFLGKF---NKTRKCNFQIDQIKKIWFDEASLREFLDLYYGIF 221
Query: 218 DELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDE 277
DEL L +KL+ K +FV Q + W+ +L++ + + L + +
Sbjct: 222 DELDLLYKLKIWTNKS---------FYSFVSRQESLAWQYDILLSLKDHWLNLQSLQKRQ 272
Query: 278 IYLSI-YNTSGNAIKEYE-LKYKLPTNDKVN---------------------------LE 308
+ L + NA+ L ++ +D ++
Sbjct: 273 LELEVQLKVQNNALLLSPILMHQAHKDDGSQSPIRKQLLNDLNVNNNAEVLIHKQLKAIK 332
Query: 309 LRKNNITLDFYKIILNLLSNL---INIKGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
K + LD ++ + ++N +N+K + Y ++S+GSG+T L+KLW K
Sbjct: 333 DEKTLVYLDIARLSFDCMANTSDILNLKTPKG------TYAVLSLGSGLTGLVKLWITTK 386
>ref|NP_015213.1| Peripheral peroxisomal membrane peroxin required for the regulation
of peroxisome size and maintenance, recruits GTPase
Rho1p to peroxisomes, induced by oleate, interacts with
homologous protein Pex27p; Pex25p [Saccharomyces
cerevisiae]
sp|Q02969|PEX25_YEAST Peroxisomal membrane protein PEX25 (Peroxin-25)
gb|AAB68249.1| Ypl112cp [Saccharomyces cerevisiae]
Length = 394
Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats.
Identities = 62/300 (20%), Positives = 122/300 (40%), Gaps = 54/300 (18%)
Query: 99 KKRYVKKNCQAKFVFNTLEGKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQL 158
K+ + + + L+H + ++ +LLL+ L NF K+ + QQL
Sbjct: 108 KRNLTVLDPSVLTYYTKILKNLTVKVALRHPITVIKVLLLSL---LRNFDKKIDFISQQL 164
Query: 159 SLFRYYLRFGNFAINLYKIIKRFRWLREMKKLHYK-DQSILFYFKNFRFFDIIEAFYNLT 217
S FRY LRFG + + +F + +K +++ DQ +F + ++ +Y +
Sbjct: 165 STFRYILRFGGTPFRVCSFLGKF---NKTRKCNFQIDQIKKIWFNEASLREFLDLYYGIF 221
Query: 218 DELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDE 277
DEL L +KL+ K +FV Q + W+ +L++ + + L + +
Sbjct: 222 DELDLLYKLKIWTNKS---------FYSFVSRQESLAWQYDILLSLKDHWLNLQSLQKRQ 272
Query: 278 IYLSI-YNTSGNAIKEYE-LKYKLPTNDKVN---------------------------LE 308
+ L + NA+ L ++ +D ++
Sbjct: 273 LELEVQLKVQNNALLLSPILMHQAHKDDGSQSPIRKQLLNDLNVNNDAEVLIHKQLKAIK 332
Query: 309 LRKNNITLDFYKIILNLLSNL---INIKGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
K + LD ++ + ++N +N+K + Y ++S+GSG+T L+KLW K
Sbjct: 333 DEKTLVYLDIARLSFDCMANTSDILNLKTPKG------TYAVLSLGSGLTGLVKLWITTK 386
>gb|AAT92840.1| YPL112C [Saccharomyces cerevisiae]
Length = 394
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 62/300 (20%), Positives = 122/300 (40%), Gaps = 54/300 (18%)
Query: 99 KKRYVKKNCQAKFVFNTLEGKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQL 158
K+ + + + L+H + ++ +LLL+ L NF K+ + QQL
Sbjct: 108 KRNLTVLDPSVLTYYTKILKNLTVKVALRHPITVIKVLLLSL---LRNFDKKIDFISQQL 164
Query: 159 SLFRYYLRFGNFAINLYKIIKRFRWLREMKKLHYK-DQSILFYFKNFRFFDIIEAFYNLT 217
S FRY LRFG + + +F + +K +++ DQ +F + ++ +Y +
Sbjct: 165 STFRYILRFGGTPFRVCSFLGKF---NKTRKCNFQIDQIKKIWFNEASLREFLDLYYGIF 221
Query: 218 DELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDE 277
DEL L +KL+ K +FV Q + W+ +L++ + + L + +
Sbjct: 222 DELDLLYKLKIWTNKS---------FYSFVSRQESLAWQYDILLSLKDHWLNLQSLQKRQ 272
Query: 278 IYLSI-YNTSGNAIKEYE-LKYKLPTNDKVN---------------------------LE 308
+ L + NA+ L ++ +D ++
Sbjct: 273 LELEVQLKVQNNALLLSPILMHQAHKDDGSQSPIRKQLLNDLNVNNDAEVLIHKQLKAIK 332
Query: 309 LRKNNITLDFYKIILNLLSNL---INIKGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
K + LD ++ + ++N +N+K + Y ++S+GSG+T L+KLW K
Sbjct: 333 DEKTLVYLDIARLSFDCMANTSDILNLKTPKG------TYAVLSLGSGLTGLVKLWITTK 386
>ref|XP_447712.1| hypothetical protein CAGL0I10879g [Candida glabrata CBS138]
emb|CAG60657.1| unnamed protein product [Candida glabrata CBS 138]
Length = 363
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 53/305 (17%), Positives = 119/305 (39%), Gaps = 57/305 (18%)
Query: 99 KKRYVKKNCQAKFVFNTLEGKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQL 158
++ V+ + Q + + +L+H + + + ++ NF K + QQL
Sbjct: 78 RENIVRWDPQVLTYYKKVLKDLKWWMMLRHPITIAKIWVVAMS---RNFEIKASYLSQQL 134
Query: 159 SLFRYYLRFGNFAINLYKIIKRFRWLRE---MKKLHYKDQSILFYFKNFRFFDIIEAFYN 215
S +RY LRFG+ + I K+ + +F ++I
Sbjct: 135 STYRYILRFGSSPFQVLNIWKKLAQTYKEGLTASC-----IHKLWFNEDSIREVINLHNT 189
Query: 216 LTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIR 275
+ DEL+L +KL+ K ++++Q I WE + ++ + + +++ +
Sbjct: 190 VCDELVLLYKLKVWDHK---------DFYNWLEKQEAISWEADILFSLKNKLIELQEMKQ 240
Query: 276 DEIYLSI-YNTSGNAIKE-----------YELKYKLP-----------TNDKVNLELRKN 312
+ I A++ + +L T +++ +L +
Sbjct: 241 KRYEMLIDLRARRQALELSKSLHRSRENMSPIHNQLLHEFDNSDDWRRTELEISSQLEEY 300
Query: 313 -----NITLDFYKIILNLLSN---LINIKGKRDKYNSELAYEIISVGSGVTELLKLWNRA 364
I LD ++ +L++N ++N++ R Y + S+GSG++ L+KLW+
Sbjct: 301 RHGISMIYLDIMRLSCDLIANTTDVLNMRVPRG------TYAVFSLGSGLSGLMKLWHTT 354
Query: 365 KVTSA 369
++
Sbjct: 355 RMDLE 359
>ref|XP_001383435.2| hypothetical protein PICST_56779 [Pichia stipitis CBS 6054]
gb|ABN65406.2| predicted protein [Pichia stipitis CBS 6054]
Length = 401
Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 102/276 (36%), Gaps = 42/276 (15%)
Query: 111 FVFNTLEGKEVC-SKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGN 169
+N E + S L+H + ++++ F + ++ LS++R +LRFG
Sbjct: 144 ARYNNKEKQLNLISNFLKHPSDFIRIIVILVCSL---FRERFAGMVSGLSMYRQFLRFGK 200
Query: 170 FAINLYKIIKRFRWLREMKKLHYKDQSILFYF----KNFRFFDIIEAFYNLTDELILFHK 225
+ + + + YK+ + + ++ +Y + DE +L +K
Sbjct: 201 TPFRIRGLANKL-----SSNITYKNNDVKINYPNIMNRKTLGEVFSLYYGINDESLLLYK 255
Query: 226 LQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YN 284
L+ + + FV W LA+ E + L + E+ + I
Sbjct: 256 LKFLSNES---------YHKFVSRHESFGWYSETWLALYNAYENLQNLTQQEMDVKISIQ 306
Query: 285 TSGNAIKEYE-------LKYKLPTNDKV--NLELRKNNITLDFYKIILNLLSNLINIKGK 335
A + + + KV +++ +KNN LD YK I +L+ N +
Sbjct: 307 VKSKAKLLSKQLLGSGAVSSSSNEDAKVLSDIQFKKNNAWLDIYKNISDLIFNTYTV--- 363
Query: 336 RDKYNSELAYEIISVGSGVT----ELLKLWNRAKVT 367
+ L ++ I + G++ +KL+ K
Sbjct: 364 ---FRLPLPFDTIQIWMGISASVLSTVKLYRETKKK 396
>ref|XP_719137.1| peroxisome regulatory protein Pex25 [Candida albicans SC5314]
gb|EAL00242.1| potential peroxisome regulatory protein Pex25 [Candida albicans
SC5314]
Length = 539
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 98/283 (34%), Gaps = 48/283 (16%)
Query: 122 CSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRF 181
H + ++++ + L F K +I LS++R +LRFG + +I +F
Sbjct: 269 LKNFFNHPADFIKIIVI---LILSIFKQKAAGMINGLSMYRQFLRFGKTPFRIRDLIVKF 325
Query: 182 RWLREMKKLHYKDQSILF-YFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
+ Q F + +Y + DE IL +KL +
Sbjct: 326 HHNVFNNSSDNQVQINKSKIFDRKTLGQFLSLYYGINDESILLYKLNVLSN--------- 376
Query: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE----- 294
FV + I W LA+ E + L++ E+ L I A + +
Sbjct: 377 PDYKKFVSKHESIAWHCETWLALYNAYENLQNLLQQEMDLKIQIQVKNKAKQLSKQILLG 436
Query: 295 -----------LKYKLPTNDKVN---------LELRKNNITLDFYKIILNLLSN---LIN 331
L + + T VN ++ +KNN +D YK + +L N + N
Sbjct: 437 GNAKGNDSGGLLGFNISTIPTVNSEDAKNLTQIQFKKNNAWIDIYKNLSDLAFNTYTVFN 496
Query: 332 IKGKRDKYNSELAYEIISVGSGVTELLKLWNRAKVTS-ANEHT 373
I D + + + + V +KL+ K E T
Sbjct: 497 IALPFDTWQI-----WMGISASVLSTIKLYRETKQKMIEKELT 534
>ref|XP_719254.1| peroxisome regulatory protein Pex25 [Candida albicans SC5314]
gb|EAL00364.1| potential peroxisome regulatory protein Pex25 [Candida albicans
SC5314]
Length = 539
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 98/283 (34%), Gaps = 48/283 (16%)
Query: 122 CSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRF 181
H + ++++ + L F K +I LS++R +LRFG + +I +F
Sbjct: 269 LKNFFNHPADFIKIIVI---LILSIFKQKAAGMINGLSMYRQFLRFGKTPFRIRDLIVKF 325
Query: 182 RWLREMKKLHYKDQSILF-YFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANT 240
+ Q F + +Y + DE IL +KL +
Sbjct: 326 HHNVFNNSSDNQVQINKSKIFDRKTLGQFLSLYYGINDESILLYKLNVLSN--------- 376
Query: 241 NRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE----- 294
FV + I W LA+ E + L++ E+ L I A + +
Sbjct: 377 PDYKKFVSKHESIAWHCETWLALYNAYENLQNLLQQEMDLKIQIQVKNKAKQLSKQILLG 436
Query: 295 -----------LKYKLPTNDKVN---------LELRKNNITLDFYKIILNLLSN---LIN 331
L + + T VN ++ +KNN +D YK + +L N + N
Sbjct: 437 GNAKGNDSGGLLGFNISTIPTVNSEDAKNLTQIQFKKNNAWIDIYKNLSDLAFNTYTVFN 496
Query: 332 IKGKRDKYNSELAYEIISVGSGVTELLKLWNRAKVTS-ANEHT 373
I D + + + + V +KL+ K E T
Sbjct: 497 IALPFDTWQI-----WMGISASVLSTIKLYRETKQKMIEKELT 534
>ref|XP_457136.1| hypothetical protein DEHA0B03894g [Debaryomyces hansenii CBS767]
emb|CAG85129.1| unnamed protein product [Debaryomyces hansenii CBS767]
Length = 497
Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 93/266 (34%), Gaps = 40/266 (15%)
Query: 122 CSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRF 181
L H + +++L + F S+L LSLFR +LRFG + +
Sbjct: 240 LKNFLHHPRDFIKIIVL---LACSIFRSRLSGTAGGLSLFRQFLRFGQSPFKTRRFKNKL 296
Query: 182 --RWLREMKKLHYKDQSILF--YFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSH 237
R K Y F DI +Y++ DE L +K+ K
Sbjct: 297 VSRTTIATKSGDYMIDVSSIGKCFTKDVLGDIFSLYYSVFDEAGLLYKMNFFRSKS---- 352
Query: 238 ANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE-- 294
+ + W +L I + ++L + E+ L I A +
Sbjct: 353 -----FHKVILRHESLAWYYETLLGIYNAYGRLQKLSQQEMDLKIQIQVKSKARLLSKQL 407
Query: 295 --------LKYKLPTNDKVNL---ELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSEL 343
L ++ T D L + +K N +D YK + + + N + +N L
Sbjct: 408 LGASSIEGLSHEDDTKDAQQLKEIQFKKYNSYIDIYKWLSDFIFNTYTV------FNMAL 461
Query: 344 AYEIISVGSGVT----ELLKLWNRAK 365
++ + + G++ +LKL+ +
Sbjct: 462 PFDTLQLWMGISASSLSILKLYRETR 487
>ref|XP_455112.1| unnamed protein product [Kluyveromyces lactis]
emb|CAG97819.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 431
Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats.
Identities = 64/294 (21%), Positives = 109/294 (37%), Gaps = 57/294 (19%)
Query: 113 FNTLEGKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAI 172
+ L K IL++ L L L+ +L F K LV QL +R +R G
Sbjct: 153 YLKLFSKGNLLTILRNP-RLSGKLFLSSSSKL--FLEKGALVSSQLGFYRQIMRCGGTPF 209
Query: 173 NLY----KIIKRFRWLREMKKLHYKDQS-ILFYFKNFRFFDIIEAFYNLTDELILFHKLQ 227
LY K+I F ++ LH K ++ + I+ +Y + DEL+L +KL+
Sbjct: 210 RLYHWYQKLISTFYASQKSSTLHSKGLVWYKNWWNEESLSEFIDLYYGIMDELMLLYKLK 269
Query: 228 SMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTS 286
K + +V + + W +L + KN E+ + + + E L I Y
Sbjct: 270 LWSNKS---------MHAWVSKHEALSWYYDIMLGLKKNWEKLQSIKQQEFELKIQYQVR 320
Query: 287 GNAIKEYELKYKLP-------------------TNDKVNL-----------ELRKNNITL 316
A++ P D ++L + K +
Sbjct: 321 QRALELSSKLNATPSVDSNKNTALIKQTIFESFKQDNLDLELEVVQKLKNYQYEKRIVKF 380
Query: 317 DFYKIILNLLS---NLINIKGKRDKYNSELAYEIISVGSGVTELLKLWNRAKVT 367
D ++ + L+ ++ +IK Y I+S+ SGV KLW +AK
Sbjct: 381 DLTRLFFDFLADTTDVFSIKTPPG------TYAILSLCSGVLGFSKLWIQAKEQ 428
>gb|ABG36525.1| Pex25p [Pichia angusta]
Length = 425
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 97/273 (35%), Gaps = 39/273 (14%)
Query: 129 TLGLLSLLL----LTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRW- 183
T +L L+ L + L F ++ + + LS++R LR G + K++ R
Sbjct: 156 TQDVLRQLVARPELIVVLFLGQFEARFVGLTKMLSVYRQMLRAGTVPTKVLKMLSRISES 215
Query: 184 ---LREMKKLHYKDQSILF-YFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHAN 239
L+ +K K Q + + +I +Y DE +L +K+ + K
Sbjct: 216 VGLLQSSEKASTKLQRLKSDWCNFKSLGEICALYYAWFDESLLAYKIGLLDEKT------ 269
Query: 240 TNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAIKE------ 292
T F + W IL + E+ QL E L I Y A +
Sbjct: 270 TPNYRKFAVRHEALAWYTNIILGLRAQFEKLSQLSNKENSLKINYQVKQRAKRLVSTIKP 329
Query: 293 --YELKYKLP---TNDKVNLEL---------RKNNITLDFYKIILNLLSNLINIKGKRDK 338
+ P T+ K L+ K + L+ K++ + + +N+ +
Sbjct: 330 DQSPISLYGPLEVTDTKTQLQYSTELKKISKEKYMVQLEILKLLCDFAYDTVNVFHLKID 389
Query: 339 YNSELAYEIISVGSGVTELLKLWNRAKVTSANE 371
L + +G+G L K+W K + E
Sbjct: 390 EPLHLLF---GLGAGAISLSKIWIAEKEKTEKE 419
>ref|XP_001646454.1| hypothetical protein Kpol_1048p26 [Vanderwaltozyma polyspora DSM
70294]
gb|EDO18596.1| hypothetical protein Kpol_1048p26 [Vanderwaltozyma polyspora DSM
70294]
Length = 418
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 54/300 (18%), Positives = 101/300 (33%), Gaps = 70/300 (23%)
Query: 113 FNTLEGKEVCSK-ILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFA 171
FN L+G K ++ L + L+ + K+ + QLS FRY LRFG
Sbjct: 136 FNKLKGNYSLFKYFIKFPLTTIKFFLI---FSFKSVEKKISFINSQLSTFRYILRFGYLP 192
Query: 172 INLYKIIKRFRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFG 231
L + + + + + D + +Y++ DEL +KL
Sbjct: 193 FYLLPYLDKLKSIAKSPH-----TIGKIALNETFLQDTLNIYYSIFDELDTLYKLNLWSN 247
Query: 232 KKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSI-YNTSGNAI 290
++ V W++ +LA+ N + L R E+ L + A+
Sbjct: 248 ---------DQFYNIVGRHEAYSWQLDILLALKNNWLSLKSLERKELELQLKLQFKEEAL 298
Query: 291 KEYELKY-----------------------KLPTNDKV-------------------NLE 308
+ K D V +++
Sbjct: 299 ELSNFYNNFNNDNDKNNNNNIINNNDNDDTKTEKPDSVISYSFSNSFSTSDIEQQLKSIK 358
Query: 309 LRKNNITLDFYKIILNLLSN---LINIKGKRDKYNSELAYEIISVGSGVTELLKLWNRAK 365
+K + LD ++ +L++N + N+K Y I+S+ SG+T +K+W +
Sbjct: 359 DQKLIVNLDLVRLSFDLMANTTDVFNMKVPTG------TYSILSLCSGITGFIKIWINTR 412
>ref|XP_001523976.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gb|EDK46608.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 571
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 96/285 (33%), Gaps = 65/285 (22%)
Query: 124 KILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRW 183
L+H ++++ F ++ +I LS++R +LRFG ++ ++K+ +
Sbjct: 303 NFLKHPQDFFRIIVILV---CSIFKLRVAGMINGLSMYRQFLRFGKTPFRIHDLVKKVQE 359
Query: 184 LREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRL 243
K ++ + F + +Y + DE IL +KL +
Sbjct: 360 NVHSKTINKQL------FSRSTLSQVASLYYGINDESILLYKLNVLTN---------PWY 404
Query: 244 MTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIY-------------------- 283
+ V W + +A+ E+ +L + I L I
Sbjct: 405 KSIVSRHESYAWYLETWIALYNAYEKLGKLSEERINLQIQIHVKAKAKAMAKQFSNGNMH 464
Query: 284 NTSGNAIKEYELKY--------KLPTNDKVNLELRKN---------NITLDFYKIILNLL 326
+G A K K+++E +K N +D YK + +L
Sbjct: 465 QGNGGANFLNMFKNTNSGANNGDDELKPKLSIEEQKQLEDLLFKIHNTWIDIYKNLADLG 524
Query: 327 SNLINIKGKRDKYNSELAYEIISVGSGVT----ELLKLWNRAKVT 367
N + + +L ++ + G+T +KL+ K
Sbjct: 525 FNTYTV------FKLKLPFQTWQIWMGITASVLSSIKLYRETKRK 563
>ref|XP_001485441.1| hypothetical protein PGUG_03169 [Pichia guilliermondii ATCC 6260]
gb|EDK39072.1| hypothetical protein PGUG_03169 [Pichia guilliermondii ATCC 6260]
Length = 178
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 65/184 (35%), Gaps = 33/184 (17%)
Query: 202 KNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNIL 261
D+ +Y + DE++L KL+ K + W +L
Sbjct: 2 TRKTLGDLFSLYYGIHDEILLLFKLKFFTSKS---------FQQYAARHESRAWYYETLL 52
Query: 262 AINKNIEQWRQLIRDEIYLSI-YNTSGNAIKEYE-----------LKYKLPTNDKV--NL 307
A+ E+ +QL + E+ + I A + Y+ PT+ ++
Sbjct: 53 ALYNTYERLQQLSQQEMDMRIQIQVKQRAKLLSKQLLGGSQLLNSSHYEDPTDLNQLKDI 112
Query: 308 ELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISVGSGVT----ELLKLWNR 363
+ +K N +D YK + + N + +N +L ++ + G+T +KL+
Sbjct: 113 QFKKYNAYIDIYKWLADFAFNTYTV------FNLKLPFDTFQIWMGITASLLSSIKLYRE 166
Query: 364 AKVT 367
Sbjct: 167 TNKK 170
>ref|XP_001485442.1| hypothetical protein PGUG_03171 [Pichia guilliermondii ATCC 6260]
gb|EDK39073.1| hypothetical protein PGUG_03171 [Pichia guilliermondii ATCC 6260]
Length = 265
Score = 56.4 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 113 FNTLEGKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGN 169
++ + L+H L ++++ + FSS+L ++ L+++R +LRFG
Sbjct: 193 YDRTAKLSLLQNFLKHPANFLRIVII---LFCSIFSSRLTPLVGGLAMYRQFLRFGK 246
>ref|XP_001011230.1| hypothetical protein TTHERM_00145910 [Tetrahymena thermophila
SB210]
gb|EAR90985.1| hypothetical protein TTHERM_00145910 [Tetrahymena thermophila
SB210]
Length = 252
Score = 48.7 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 60/180 (33%), Gaps = 25/180 (13%)
Query: 149 SKLRLVIQQLSLFRYYLRFG---NFAINLYKIIKRFRWLREMKKLHYKDQSILFYFKNFR 205
S++ + +SL R LRFG + L +IK+ + K + FY R
Sbjct: 59 SRIERLSGNMSLTRKVLRFGRPIGLSFTLIDLIKQLNNSLKNPKSVTDIKQSPFYIT-MR 117
Query: 206 FFDIIEA-FYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAIN 264
I + L D ++ F +L M KK + W + + +
Sbjct: 118 IGSTISLILFFLLDHILYFARLDLM--KKRPELTKFADFYS------SFWWFLDCLFGLT 169
Query: 265 KNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLPTNDKVNLELRKNNITLDFYKIILN 324
NI++ + L L NA + + K + + D ++ I +
Sbjct: 170 SNIQEIKYL----FEL------NNAERLSSNENKGEKIKSNKARIDAAIV--DAFRNIFD 217
>ref|XP_001485931.1| hypothetical protein PGUG_01602 [Pichia guilliermondii ATCC 6260]
gb|EDK37504.1| hypothetical protein PGUG_01602 [Pichia guilliermondii ATCC 6260]
Length = 284
Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 25/166 (15%)
Query: 182 RWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTN 241
R +R L K F F ++E NL D L LF KL +TN
Sbjct: 96 RRIRRQVNLGSKFTLKKL---EFIFVQVLEMVANLLDNLHLFLKLPGFPEGLVKVLLHTN 152
Query: 242 RLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDE----IYLSIYNTSGNAIKEYELKY 297
+L W ++ + I K + Q +IR E + L+I + S N+ +
Sbjct: 153 KL-----------WVLILVFLIRKTVLQLLNVIRKEKKVNVELNILSQSKNSKVLLNSES 201
Query: 298 KLPTN-----DKV--NLELRKNNITLDFYKIILNLLSNLINIKGKR 336
+ P+N +KV +L K+ + L+ ++L N+I + G
Sbjct: 202 QDPSNIYRKYEKVLKDLRFDKSMLVLELIGNFMDLAFNVIELYGVP 247
>ref|XP_503276.1| hypothetical protein [Yarrowia lipolytica]
emb|CAG81480.1| unnamed protein product [Yarrowia lipolytica CLIB122]
Length = 299
Score = 44.1 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 68/229 (29%), Gaps = 56/229 (24%)
Query: 143 RLLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLREMKKLHYKDQSILFYFK 202
+L S+L ++ S FR ++ G + + ++ K+ F+
Sbjct: 117 KLAEMESRLNGMVSNFSQFRKIIKLGEWLGPVEDLV------------TTKNPLTSLAFQ 164
Query: 203 NFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILA 262
+++E + D++ K+ + GK+ N + + W +
Sbjct: 165 ----SELMEVINTIGDDIYCLSKIGVVKGKRLGR--NGELMANW-------GWYGAIFIN 211
Query: 263 INKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLPTNDKVNLELRKNNITLDFYKII 322
I IE ++ + +I++ L +K+
Sbjct: 212 IKVGIETYQLAAKSGDEAAIWDAK-----------------------------LTLFKLA 242
Query: 323 LNLLSNLINIKGKRDKYNSELAYEIISVGSGVTELLKLWNRAKVTSANE 371
+ + I+ N + + SG KLW + E
Sbjct: 243 NDFIFCTIDCLEPEGLSNIYQT--VTGLASGSVGFYKLWRKISKKLDKE 289
>ref|XP_460264.1| hypothetical protein DEHA0E23463g [Debaryomyces hansenii CBS767]
emb|CAG88545.1| unnamed protein product [Debaryomyces hansenii CBS767]
Length = 284
Score = 42.6 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 39/184 (21%), Positives = 64/184 (34%), Gaps = 28/184 (15%)
Query: 184 LREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRL 243
+KL ++ +I+E N+ D L LF + + TN+L
Sbjct: 97 TNPNRKLPFQYTFKNI---EKVLIEILETLANILDNLHLFSRFPMFPARLVDLLKQTNKL 153
Query: 244 MTFVKEQHYILWEVLNILAINKNIEQWRQLIRDE----IYLSIYNTSGNAIKE------- 292
W V+ I I K+I Q +IR E I LSI N + N+
Sbjct: 154 -----------WVVILIFLIRKSISQLLNVIRKERKVNIELSILNLNKNSKLLINKDDNN 202
Query: 293 --YELKYKLPTNDKVNLELRKNNITLDFYKIILNLLSNLINIKGKRDKYNSELAYEIISV 350
+ + K +L+ K + L+ L++ NLI + G S+
Sbjct: 203 GDNNIFRRYEKVLK-DLQFDKMMLVLELIGNFLDMGFNLIELYGIPVPEWFMSLLNAASM 261
Query: 351 GSGV 354
G +
Sbjct: 262 GMTI 265
>ref|XP_001014394.2| hypothetical protein TTHERM_00522160 [Tetrahymena thermophila
SB210]
gb|EAR94149.2| hypothetical protein TTHERM_00522160 [Tetrahymena thermophila
SB210]
Length = 232
Score = 38.3 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 29/213 (13%), Positives = 75/213 (35%), Gaps = 27/213 (12%)
Query: 114 NTLEGKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFAIN 173
N EG++ K +Q+ L +++ + + R R
Sbjct: 9 NKTEGRDKFCKAIQYASRFLKWHF--TNTENKELAARFNGLFNGMKDARKLFRL----FK 62
Query: 174 LYKIIKRFRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELILFHKLQSMFGKK 233
I++ + L L+ KD + N ++ D L++ ++ + G
Sbjct: 63 TINEIQKIQEL-----LNKKDNDEINKALNILVRAFFGLYW-YFDNLVILKSVKFIHGDP 116
Query: 234 NTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEY 293
+ ++ W + +L+I +NI + +++E L + N +++
Sbjct: 117 KPDN-----------KKGSTCWLIALLLSIAQNIRNLLKSLQEEANL-VKQVLENQVEQE 164
Query: 294 ELKYKLPTNDKVNLELRKNNITLDFYKIILNLL 326
+K + ++ ++ +I L K + + +
Sbjct: 165 SVKLN---DQIAKIKKQRFDIYLSIIKNLGDTI 194
>ref|ZP_04019073.1| exonuclease SbcC family protein [Finegoldia magna ATCC 53516]
gb|EEJ67933.1| exonuclease SbcC family protein [Finegoldia magna ATCC 53516]
Length = 527
Score = 38.3 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 63/158 (39%), Gaps = 13/158 (8%)
Query: 180 RFRWLRE-MKKLHYKDQSILFYFKNFRFFDIIE-AFYNLTDELILFHKLQSMFGKKNTSH 237
+ L E +++ +S N R+ D+I N+ L L L+ ++ +
Sbjct: 273 KLYQLYEYSQEIIKGIESSNVKLNNLRYTDLISEIIDNIDKNLTLLKFLKPLYDRFTYVK 332
Query: 238 ANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIR-DEIYLSIYN---------TSG 287
++ N T +++ + +L +I+ QL E Y I TS
Sbjct: 333 SSYNNYKTILEKFKQVPKSYNILLNTQNDIQILNQLSNLSENYYRINQEIMDNSQVLTSI 392
Query: 288 NAIKEYELKYKLPTNDKVNLELRKNNI-TLDFYKIILN 324
N K EL ++ N + ++L K NI L KIIL+
Sbjct: 393 NTSKVSELTNRIDKNKEKYIQLYKLNISYLKINKIILD 430
>ref|XP_454263.1| unnamed protein product [Kluyveromyces lactis]
sp|Q6CP76|ATM_KLULA Serine/threonine-protein kinase TEL1 (DNA-damage checkpoint kinase
TEL1) (Telomere length regulation protein 1) (ATM
homolog)
emb|CAG99350.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140]
Length = 2761
Score = 38.0 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 49/148 (33%), Gaps = 20/148 (13%)
Query: 118 GKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRFGNFA------ 171
GK+ KIL + L L R + LL K V Q LF+ L+ N
Sbjct: 947 GKQRVFKILSGCITRLPKYLTNRVVSLLGTYVKRVGVTNQRILFKELLQRFNPPQESVET 1006
Query: 172 ---INL----YKIIKRFRWLREMKKL-HYKDQSILFYFKNFRFFDIIEAFYNLTDELILF 223
+L +I F L + L + S L + D I FY L + LF
Sbjct: 1007 AAFFSLTCTKLSLINEFYLLNSILHLLDNTNFSHLLLYVEKSL-DTISTFYGLCSKQDLF 1065
Query: 224 HK-----LQSMFGKKNTSHANTNRLMTF 246
H+ + F K S +
Sbjct: 1066 HQCRYFIIDQWFTKSAKSKIYEPSIWKV 1093
>gb|EEK07414.1| hypothetical protein BmurDRAFT_15280 [Brachyspira murdochii DSM
12563]
Length = 426
Score = 37.6 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 41/117 (35%), Gaps = 15/117 (12%)
Query: 215 NLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHY--ILWEVLNILAINKNIEQWRQ 272
+L DE IL + N +KE IL+ +++ K + +
Sbjct: 285 SLMDESILNY------------IDNYADYYNELKEFKSFNILYYDDKTISLYKRVSKLED 332
Query: 273 LIRDEIYLSIYNTSGNAIKEYELKYKLPTNDKVNLELRKNNITLDFYKIILNLLSNL 329
L EI + K K ND L L+K N DFY I +L+ +
Sbjct: 333 LKLAEIDNMFMTFELESQKLISPYIKDFVNDSEAL-LKKYNAPSDFYSNIDSLIFGI 388
>dbj|BAD95474.1| Cryhime1 [Paenibacillus popilliae]
Length = 1340
Score = 37.2 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 18/47 (38%)
Query: 271 RQLIRDEIYLSIYNTSGNAIKEYELKYKLPTNDKVNLELRKNNITLD 317
+ + + I S N++ KY T+ V E R N LD
Sbjct: 11 KSYNQHGNEMQIIQPSSNSLLYSPNKYPYATDPNVIAEGRSYNNWLD 57
>ref|XP_001019375.1| hypothetical protein TTHERM_00389700 [Tetrahymena thermophila SB210]
gb|EAR99130.1| hypothetical protein TTHERM_00389700 [Tetrahymena thermophila SB210]
Length = 1778
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 47/229 (20%), Positives = 85/229 (37%), Gaps = 29/229 (12%)
Query: 110 KFVFNTLEGKEVCSKILQHTLGLLSLLLLTRKIRLLNFSSKLR--LVIQQLSLFRYYL-- 165
K+ N L + + +HT L L I LL K ++I+Q S F +L
Sbjct: 1298 KYSMNFLYVQYGLFQFQKHTNFLFILFEFVVNIPLLIQRYKWARNILIEQTSHFLEWLNR 1357
Query: 166 ----RFGNFAINLYKIIKRFRWLREMKKLHYKDQSILFYFKNFRFFDIIEAFYNLTDELI 221
+ NF +N+ I K+ + M + + +QS + DII
Sbjct: 1358 KNIQKRQNFLLNMLSIDKKDEHVINMSE-NKTNQSDQSNYYFKNQKDIIHLLTG------ 1410
Query: 222 LFHKLQSMFGKKNTSHANTNRLM------TFVKEQHYILWEVLNILAINKNIEQWRQLIR 275
H L+ + K++ + L +K++ + LN+L + N+ R++
Sbjct: 1411 --HDLKQV--KQSNQELDIIDLEIDEEEVNLIKQRSKLSSNNLNLLPQDMNLVGLREIDN 1466
Query: 276 DEIYLSIYNTSGNAIKEYE----LKYKLPTNDKVNLELRKNNITLDFYK 320
+ I SG + E + DK + ++ + I LD K
Sbjct: 1467 KQNDKQIIKESGGNKNQIEGGLVEGNQGDQIDKKDTKIEQQLINLDLLK 1515
>ref|XP_001010669.1| hypothetical protein TTHERM_00112740 [Tetrahymena thermophila
SB210]
gb|EAR90424.1| hypothetical protein TTHERM_00112740 [Tetrahymena thermophila
SB210]
Length = 225
Score = 36.8 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 2/99 (2%)
Query: 150 KLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLREMKKLHYKDQSILFYFKNFRFFDI 209
K+ + + + R LR G A NL ++I + L + H K Q D
Sbjct: 26 KMEKLGSTMQMTRKVLRLGKPATNLMQMIISIKKLINSQ--HNKPQETKLLLITKALKDF 83
Query: 210 IEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVK 248
Y L D + K+ + + ++
Sbjct: 84 FLMSYYLCDHFVWLSKINIITKEAIAKKVEILGYCFWLA 122
>ref|XP_001709765.1| Coiled-coil protein [Giardia lamblia ATCC 50803]
gb|EDO82091.1| Coiled-coil protein [Giardia lamblia ATCC 50803]
Length = 1076
Score = 36.4 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 40/118 (33%), Gaps = 12/118 (10%)
Query: 212 AFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWR 271
L ++ L H L+ M K M + E+ N+LA ++
Sbjct: 493 LHKELAEKTDLLHNLKLMDTKMRHDLEEAKDGM---ERASSRTTELENMLA-----QKTL 544
Query: 272 QLIRDEIYLSIY---NTSGNAIKEYELKYKLPTNDKV-NLELRKNNITLDFYKIILNL 325
QL R L++ NT +A L +V L L +N D ++ L
Sbjct: 545 QLDRKSNDLTLLMEENTKFSAQIVALLNSTNSLKLEVEQLRLERNTSYGDIKRLSAEL 602
>ref|YP_001488988.1| two-component response regulator [Arcobacter butzleri RM4018]
gb|ABV66319.1| two-component response regulator [Arcobacter butzleri RM4018]
Length = 214
Score = 36.4 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 198 LFYFKNFRFFDIIEAFYNLTDELI-LFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWE 256
YF +FD I A + DE I L K + + + T +WE
Sbjct: 121 KIYFDENSYFDFISATITINDEEIRLTKKEKLLMNLFLSKKNQVITYETI----ENYVWE 176
Query: 257 VL--NILAINKNIEQWRQLIRDEI 278
+ +I I + R+++ E
Sbjct: 177 GNFVTLESIRSLIRRLRKILDKEF 200
>ref|NP_348932.1| Polysaccharide deacetylase-like protein; Xylanase/chitin
deacetylase family enzyme [Clostridium acetobutylicum
ATCC 824]
gb|AAK80272.1|AE007732_6 Polysaccharide deacetylase-like protein; Xylanase/chitin
deacetylase family enzyme [Clostridium acetobutylicum
ATCC 824]
Length = 289
Score = 36.0 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
Query: 271 RQLIRDEIYLSIYNTSGNAIKEYELKY---KLPTNDKVNLELRKNNITLDFYK------I 321
+++ + + L IY N +K L Y + D++ + K +D K I
Sbjct: 55 QEIAKKQRELKIYEDQSNTMKIPILMYHWIEDGKGDELKVSKEKFKGEMDIVKQSGYTPI 114
Query: 322 ILNLLSNLINIKGKRDKYNSELAYE 346
+ L + IN K + ++
Sbjct: 115 SFDELYDFINNKKPFSIKPILITFD 139
>dbj|BAD15303.1| parasporal crystal protein [Paenibacillus lentimorbus]
Length = 1332
Score = 36.0 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 280 LSIYNTSGNAIKEYELKYKLPTNDKVNLELRKNNITLD 317
+ I S NA+ KY T+ V E R N LD
Sbjct: 1 MQIIQPSSNALLYSPNKYPYATDPNVIAEGRSYNNWLD 38
>ref|XP_001425614.1| hypothetical protein GSPATT00029252001 [Paramecium tetraurelia
strain d4-2]
emb|CAK58216.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 36.0 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 47/158 (29%), Gaps = 10/158 (6%)
Query: 144 LLNFSSKLRLVIQQLSLFRYYLRFGNFAINLYKIIKRFRWLREMKKL-HYKDQSILFYFK 202
L + +KL + S+ R LR+ A L + + + HY++ + ++
Sbjct: 99 LRMWQNKLDALCSHFSMTRRILRWSRTAFYLQILFNKLSQQKSNHHFKHYRNLYDILFYT 158
Query: 203 NFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILA 262
DI + Y + L + + + R I W +
Sbjct: 159 YLIITDISDIIYWMC-----LIGLCNNTNLQKFTKEYAPRFYLI----ECIGWFISLCFE 209
Query: 263 INKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLP 300
N + + + I + +KY L
Sbjct: 210 YRVNQIDIAKANLQKDPKNKIKIRQIQILQNLVKYALD 247
>ref|NP_722265.1| putative periplasmic sugar-binding protein [Streptococcus mutans
UA159]
gb|AAN59571.1|AE015020_6 putative periplasmic sugar-binding protein [Streptococcus mutans
UA159]
Length = 320
Score = 35.6 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 235 TSHANTNRLMTF--------VKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYN-T 285
T N + V EQH +L+ L+I K +EQ R I++ + + I N
Sbjct: 41 TYMTMNNDFYKYLNAEVEKNVNEQHDLLYTRDPALSIKKQVEQIRFFIKERVDVIIINPV 100
Query: 286 SGNAIKE-YELKY---KLPTNDKVNLELRKNNI 314
GN+ LK + V+ + + N+
Sbjct: 101 DGNSKLLINSLKRARKQGIKVIAVDSQFKDNSA 133
>ref|XP_001351113.1| IBR domain protein, putative [Plasmodium falciparum 3D7]
emb|CAB38990.1| IBR domain protein, putative [Plasmodium falciparum 3D7]
Length = 593
Score = 35.3 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 39/139 (28%), Gaps = 26/139 (18%)
Query: 202 KNFRFFDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNIL 261
++ + + I HK++ + ++ +K + + W
Sbjct: 470 NFSIHTQLLFLYNFCKNYNIHLHKMKFF----------EDAIIQIIKCRKILKWSYT--- 516
Query: 262 AINKNIEQWRQLIRD----------EIYLSIYNTSGNAIKEYELKYKLPTNDKVNLELRK 311
W+ + E L I T I + K + +++
Sbjct: 517 --YAYFSNWKSDNQKHLFEYHQGELEKNLDILQTKTEDINLTQFKNNTDNDTVRDIQQIT 574
Query: 312 NNITLDFYKIILNLLSNLI 330
I + F+K I + N
Sbjct: 575 QMIDI-FFKNICEFMENNF 592
>sp|Q736X4|Y2776_BACC1 UPF0421 protein BCE_2776
Length = 355
Score = 35.3 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 17/130 (13%)
Query: 151 LRLVIQQLSLFRYYL----RFGNFAINLYKIIKRFRWLREMKKLHYKDQSILFYFKNFRF 206
LV +QL L + + I + + +H +
Sbjct: 227 FLLVQKQLHLLQQIIYHIDNLARTPIETCD-WSQNEKEILRRTIHSIISILRNNCNK--- 282
Query: 207 FDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKN 266
I E + L DEL Q K + +H N+ + IL+EV L+I+
Sbjct: 283 --IDEEHFKLIDELDK----QFWNYKNDLAHCKPNQYHHHFSSESIILFEV---LSIHDM 333
Query: 267 IEQWRQLIRD 276
+E+ +Q+
Sbjct: 334 LEELKQIXEK 343
>ref|YP_001394859.1| KdpD [Clostridium kluyveri DSM 555]
gb|EDK33511.1| KdpD [Clostridium kluyveri DSM 555]
Length = 898
Score = 35.3 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 21/106 (19%)
Query: 261 LAINKNIEQWRQLIRDEIYLSIYNTSGNAIKEYELKYKLPTND--------------KVN 306
L++ K E+ + + +I + I + + L T KV
Sbjct: 647 LSLEK--EKLNE-RQKQISMQIQQEKLRGNLLRTISHDLRTPLTSISGNAGILMGNSKVL 703
Query: 307 LELRKNNITLDFYK---IILNLLSNLINI-KGKRDKYNSELAYEII 348
E +K + D Y ++NL+ N+++I + + K N L E++
Sbjct: 704 SEAQKKGLYTDIYDDSMWLINLVENILSITRIEDGKINLNLQPELL 749
>ref|ZP_02600723.1| hypothetical protein Bcer0_05480 [Bacillus cereus 03BB108]
sp|A0REW2|Y2468_BACAH UPF0421 protein BALH_2468
Length = 355
Score = 35.3 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 17/130 (13%)
Query: 151 LRLVIQQLSLFRYYL----RFGNFAINLYKIIKRFRWLREMKKLHYKDQSILFYFKNFRF 206
LV +QL L + + I + + +H + Y +
Sbjct: 227 FLLVQKQLHLLQQIIYHIDNLARAPIETCD-WSQNEKEILRRTIHSIISILRNYCEK--- 282
Query: 207 FDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKN 266
I E + L DEL Q K + +H N+ + IL+EV L+I+
Sbjct: 283 --IDEEHFKLIDELDK----QFWTNKNDLAHCKPNQYHHHFSSESIILFEV---LSIHDM 333
Query: 267 IEQWRQLIRD 276
+E+ +Q+
Sbjct: 334 LEELKQIFEK 343
>ref|YP_500154.1| hypothetical protein SAOUHSC_01641 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gb|ABD30718.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
Length = 306
Score = 34.9 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 17/190 (8%)
Query: 124 KILQHTLGLLSL----LLLTRKIRLLNFSSKLRLVIQQLSLFRYYLRF--GNFAINLYKI 177
K LQ+ L L+S+ +++ + F + QLS F+ L F + + +
Sbjct: 71 KTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLSSFQKTLSFFITSLPTIIVVM 130
Query: 178 IKRFRWLREMKKLHYKDQ--SILFYF--KNFRFFDIIEAF--YNLTDELILFHK--LQSM 229
+ L + KL Y + F K + F Y +T+EL+LF+K +
Sbjct: 131 LIIVSMLAIIMKLIYNNLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ 190
Query: 230 FGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKNIEQWRQLIRDEIYLSIYNTSGNA 289
+ +++ F+ + Y+L + + +E+ + I +
Sbjct: 191 SIVDVYINHSSDPFRQFLGK--YLLTYSEMGYGLPQILEKLKCFKPQLIKF-VLQGEKRG 247
Query: 290 IKEYELKYKL 299
E ELK
Sbjct: 248 KLEVELKLYS 257
>ref|YP_895262.1| hypothetical protein BALH_2468 [Bacillus thuringiensis str. Al
Hakam]
gb|ABK85755.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 360
Score = 34.9 bits (79), Expect = 9.8, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 17/130 (13%)
Query: 151 LRLVIQQLSLFRYYL----RFGNFAINLYKIIKRFRWLREMKKLHYKDQSILFYFKNFRF 206
LV +QL L + + I + + +H + Y +
Sbjct: 232 FLLVQKQLHLLQQIIYHIDNLARAPIETCD-WSQNEKEILRRTIHSIISILRNYCEK--- 287
Query: 207 FDIIEAFYNLTDELILFHKLQSMFGKKNTSHANTNRLMTFVKEQHYILWEVLNILAINKN 266
I E + L DEL Q K + +H N+ + IL+EV L+I+
Sbjct: 288 --IDEEHFKLIDELDK----QFWTNKNDLAHCKPNQYHHHFSSESIILFEV---LSIHDM 338
Query: 267 IEQWRQLIRD 276
+E+ +Q+
Sbjct: 339 LEELKQIFEK 348
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
Posted date: May 23, 2008 5:56 PM
Number of letters in database: 883,778,997
Number of sequences in database: 2,617,685
Database: /host/Blast/data/nr_perl/nr.01
Posted date: May 23, 2008 5:54 PM
Number of letters in database: 976,759,346
Number of sequences in database: 2,761,413
Database: /host/Blast/data/nr_perl/nr.02
Posted date: May 23, 2008 5:48 PM
Number of letters in database: 374,670,760
Number of sequences in database: 1,165,270
Database: /host/Blast/data/nr_perl/nr.03
Posted date: Apr 28, 2009 5:40 PM
Number of letters in database: 114,943,120
Number of sequences in database: 354,819
Lambda K H
0.310 0.151 0.412
Lambda K H
0.267 0.0464 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,420,419,712
Number of Sequences: 6899187
Number of extensions: 245255257
Number of successful extensions: 646254
Number of sequences better than 10.0: 163
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 445
Number of HSP's that attempted gapping in prelim test: 645786
Number of HSP's gapped (non-prelim): 731
length of query: 376
length of database: 2,350,152,223
effective HSP length: 136
effective length of query: 240
effective length of database: 1,411,862,791
effective search space: 338847069840
effective search space used: 338847069840
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 80 (35.2 bits)