| Organism : | Rattus norvegicus | ||
| Protein family description: | ATP-binding cassette sub-family D | ||
| Gene | Description | Genome localization | |
| Abcd1 | Sodium- and chloride-dependent creatine transporter 1 (CT1) (Creatine transporter 1) (CHOT1) (Solute carrier family 6 member 8). [Source:Uniprot/SWISSPROT;Acc:P28570] | X: 159571376-159691622 | |
| Abcd2 | ATP-binding cassette sub-family D member 2 (Adrenoleukodystrophy- related protein). [Source:Uniprot/SWISSPROT;Acc:Q9QY44] | 7: 129542756-129591363 | |
| Abcd3 | ATP-binding cassette sub-family D member 3 (70 kDa peroxisomal membrane protein) (PMP70). [Source:Uniprot/SWISSPROT;Acc:P16970] | 2: 218396067-218432176 | |
| Abcd4 | 6: 108660570-108681707 | ||
ABCD sequence(s) for Rattus norvegicus and PTS predictions
PEX19=0.0013; start position=70; end position=79;
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MPVLSTPSRPSRVTTLKRTAVVLALTAYGVHKIYPLVRQCLTPARGPQVPAGESTQEASGATTAKAGMNRVFLQRLLVLLRLLFPGVLCRETGLLA LHSAALVSRTFLSVYVARLDGRLARCIVRKDPRAFSWQLLQWLLIALPATFINSAIRYLEGQLALSFRSRLVAHAYGLYFSQQTYYRVSNMDGRLR NPDQSLTEDMVAFAASVAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGTAWPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRKGELRYMHSRVV ANSEEIAFYGGHEVELALLQHSYQDLASQINLILLERLWYVMLEQFLMKYVWSASGLLMVAVPIITATGYAESDSEAMKKAALEMKEEELVSERTE AFTIARNLLTAAADATERIMSSYKEVTELAGYTARVYEMFQVFEDVQHCRFKRTGDLEEAQAGPGSMVHSGVHIEGPLKIQGQVVDVEQGIICENI PIITPTGEVVVASLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPTYSGVLYKPPPQRMFYIPQRPYMSVGSLRDQVIYPDSAEDMRRKGCSEQQ LEAILGIVHLRHILQREGGWEAVCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGISLLSITHRPSLWKYHTHLL QFDGEGGWKFEKLDSAARLSLTEEKQRLEQQLAGIPKMQGRLQELRQILGEAAAPGCGVPAPDPDGIGGTRGWWG |
PEX19=0.0019; start position=82; end position=91;
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MIHMLNAAAYRVKWTRSGAAKRAACLVAAAYALKTLYPILGRRLKQPGHRKAKAEDYPPAENRERLHCTEIICKKPAPGLNADFFKQLLELRKILF PKLVTTETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLVKWLMIAVPATFVNSAIRYLECKLALAFRTRLVDHAYETYFANQT YYKVINMDGRLANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTLIRTATSRGASPIGPTLLAGLVVYATAKVLKACSPKFGTLVAEEAHR KGYLRYVHSRIIANVEEIAFYRGHKVEMKQLQKCYKALAYQMNLILSKRLWYIMIEQFLMKYVWSGCGLIMVAIPIITATGFADGDLEDGPKQAMV SDRTEAFTTARNLLASGADAIERIMSSYKEITELAGYTARVYNMFWVFDEVKRGIYKRTVTQEPENNSKSRGGLELPLSDTLAIKGTVIDVDHGIL CENVPIITPAGEVVASSLNFKVEEGMHLLITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQHMFYIPQRPYMSLGSLRDQVIYPDSVDDMHEKGY TDRDLEHILHSVHLYHIVQREGGWDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAIGAGISLLSITHRPSLWKYH THLLQFDGEGGWRFEQLDTAIRLTLSEEKQKLESQLAGIPKMQQRLNELCKILGEDSVLKTIQTAEDTS |
PEX19=0.011; start position=203; end position=212;
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KKSGKPPLQNNEKEGKKERAVVDKVFLSRLSQILKIMVPRTFCKETGYLILIAVMLVSRTYCDVWMIQNGTLIESGIIGRSSKDFKRYLFNFIAAM PLISLVNNFLKYGLNELKLCFRVRLTRYLYEEYLQAFTYYKMGNLDNRIANPDQLLTQDVEKFCNSVVDLYSNLSKPFLDIVLYIFKLTSAIGAQG PASMMAYLLVSGLFLTLLKRPIGKMTIMEHKYEREYRFVNSRLITNSEEIAFYNGNKREKQTIHSVFRKLVEHLHNFIFFRFSMGFIDSIIAKYIA TVVGYLVVSRPFLDLAHPRHLHSTHSELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGKYERTMVSQQDKGIEGA QASPLIPGAGEIINADNIIKFDHVPLATPNGDILIQDLSFEVRSGANVLICGPNGCGKSSLFRVLGELWPLFGGHLTKPERGKLFYVPQRPYMTLG TLRDQVIYPDGKEDQKKKGISDQVLKGYLDNVQLGHILEREGGWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHC RKVGITLFTVSHRKSLWKHHEYYLHMDGRGNYEFKKITEDTVEFGS |
Non-significant PTS1, PTS2, PEX19 prediction reported |
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MAVPGPTARASARPRLDLQLVQKFIRIQKVFFPSWSSQNVLMFMTLLCVALLEQLVIYQVGLIPSQYYGVLGNKDLDGFKALTFLAVALIVLNSTL KSFDQFTCNLLYVSWRKDLTEHLHQLYFRARVYYTLNVLRDDIDNPDQRISQDVERFCRQLSSVTSKLIISPFTLAYYTYQCFQSTGWLGPVSIFG YFILGTMVNKTLMGPIVTKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGLVEHMRTDRRLQRLLQTQRELMSRELWLYIGINTFDYLGSILSYVV IAIPIFRGVYGDLSPTELSTLVSKNAFVCIYLISCFTQLIDLSTTLSDVAGYTHRIGELQEALLDMSRKSHDCETLGESEWDLDKAPGWPTTEPSD TAFLLDRVSILAPSSDKPLIKDLSLKICEGQSLLITGNTGTGKTSLLRVLGGLWESMKGSVQMLADFGPHGVLFLPQKPFFTDGTLREQVIYPLKE IYPDSGSADDERIVRFLELAGLSSLVARTGGLDQQVDWNWYDVLSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEAESELYRIGQQLGMTFISV GHRPSLEKFHSWVLRLHGGGSWELTRIKMG |