Protein familiy: ABCD

Organism : Caenorhabditis elegans
Protein family description: ATP-binding cassette sub-family D
Gene Description Genome localization
pmp-1 Peroxisomal Membrane Protein related family member II: 6881948-6883023
pmp-5 Peroxisomal Membrane Protein related family member V: 6664139-6665830
pmp-2 Peroxisomal Membrane Protein related family member (pmp-2) [Source:RefSeq_peptide;Acc:NP_495408] II: 6883980-6887678
pmp-3 Peroxisomal Membrane Protein related family member (pmp-3) [Source:RefSeq_peptide;Acc:NP_506620] V: 14649789-14656061
pmp-4 Peroxisomal Membrane Protein related family member (pmp-4) [Source:RefSeq_peptide;Acc:NP_503105] IV: 17402418-17405585

ABCD sequence(s) for Caenorhabditis elegans and PTS predictions

  • pmp-1
     Non-significant PTS1, PTS2, PEX19 prediction reported

  • MAVLSKLQLLNSTLTYKNWSPAFVGIFGCITIAKIYSASFRNEGKGLSLSETVGSGDVKKGKTKASLNAEFFAKLKKLLKILIPGPFSSEVFYMIV
    IGFVLLARTIADVYMITNATSVEASIVDRSPIMFAMSVFKYFLNLPAISLINALLKFSLSELKLRFRENLTKYLYGKYLGGFTYYQISNLDSRIQN
    PDQLLTQDVEKFCDGIVELYSNMTKPILDVFLYVFKLGRALGWEGPGLLFGYLMASMVVLTKLRRPIAKLTVEEQVLEGEYRYVNSRLIMNSEEIA
    FYQGNKPEKQALMGSFNNLVYHLRKTIMFRFTLGFVDNIVGKYITNIVGWVACAKTFFDVNNEKFNEMDRNELMQELYNNGRMMLKLSEALGRLAL
    AGRDMTRLSGFTTRVDTLMKVLDDMKAGRFEKAQVADESGEEGQRLMLKAGSGKLLAQDNMIKFDEVPLVTPNGDILIESLSFEVPSGRNVLVCGP
    NGCGKSSLFRTLGELWPVMGGTLTKPAKGKLFYVPQRPYMTLGTLRDQVIYPDTSFDMKMKGMSDKDLEQMLENVQLTNILEREGGWSAVQDWMDV
    LSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGAMYRLCREMNITLFTVSHRKSLWKYHEYSLYMDGRGSYRFEQIDDQSDQFGS
  • pmp-5
    PEX19=0.041; start position=254; end position=265;
    PEX19=0.047; start position=98; end position=109;

  • MGKLQVIEKKFEFGFRVFYNLFRLFPLIYSNTWLTLVLTAVTIAASVGNEIVNYKTGVIPGKFYVALIEKDEPKFWHIFWIASLCYVGLCLLMALM
    NFFSWCLYIQQRKNLVQCLHKLYYKNNFYYQLNGVDDHGIDNPDQRITQDADKLTKLLGTSIIPTVLLSPFIISYYGVRVWETAGGWGFGMIVAYF
    LIGVIINRILIGPITPWAARVEKAEGDFRYKHVSVRVNAEESAFYKSAEFEHVFSDLSFDVLFKRLLNFMCWRFPSQFFQSFFDYYGGCMSYILQL
    FPLFVFHMYDNLTPAELSGQISNNAFYFIYLINCFTRLTDLAMNIAELGGYIMRFYSEHFCNFCLVSEFVDTGKLHQSGIKNEAFRRNSELPEKAS
    GDDNLIETEHLSFGPPTNSNIRIIEMGGFMIFVLILFQSGYTDLTFHLPRNKTLLITGDSGIGKTSLMRVIADMWPHQGILKKHFKKTDAYFLPQK
    PYFPVGRLSLKQQLVFPAEENEEKSGNDEEIVRILHELKLGHLLPIVGNIHDSVDFEWQETLSPGEQQRLCFARMILAEPTVAFLDESTCNVDEGM
    ENAMYEMLRKHSITYISVGHRKSLRSHHDFELRIPSSSSFLFHEIHNQKF
  • pmp-2
     Non-significant PTS1, PTS2, PEX19 prediction reported

  • MAVFSKLQLLGQAIPPKQYAPGVVGMLAVFALIKLYKQDIRGTKHLVAKTKKDGSKGQKAHVDGVFLGKLARILKILIPGFFSKESFYLILIAVSL
    LCRTYADVYMIITSTKIEASIIDRNPLLFALEAFKYVLNLPAISVTNAILKFGIAELKLRFRERLSTHLYSQYLKGFTFYKMSNLDTRIQNADQLL
    TQDVDRFCDGIVELYSNLSKPILDVFLYLFRLGTSLGFSSPSILFSYLLFTGVGLTYLRRPIGRLTVEEQALEGEYRYVNSRLIMNSEEIAFYQGN
    QSEKETIMSTFASLVQHLRKIILFRFSIGFVDNIVAKYLATVVGWYAVGSSFFDKQHKPFIGMSRNQLMQEYYNSGRMMYKMAEALGRLALAGRDM
    TRLSGFTSRVDTLLNVLDDVNSGNYKRTMVGEKEESSALIKSELVAGSGNLRVQDNVIRFDNVPLVTPNGDVLIERLNFEVPSGTNVLVCGPNGCG
    KSSLFRVLGELWPLFGGTLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDRPLDMIRKGVSDSDLEQMLENVQLTHILEREGGWSAVQDWMDVLSGG
    EKQRIAMARLFYHKPQFAILDECTSAVSVDVEGAMYRLCREKNITLFTVSHRKSLWKYHEYSLYMDGRGSYRFEQIDDQSDQFGS
  • pmp-3
    PEX19=0.014; start position=436; end position=445;
    PEX19=0.041; start position=8; end position=17;

  • MARLALDFLFFRRFWRLLKILFPCHRRSITAWLAGALLIATALDQVMTYLVGIQPSLFYVALGNKDADTFKILCARGAAIILGKAFTLAVFKYLTN
    MLAIKSRQVCNLTMHRLYFKRQAFFKLSSSGDMLDNPDQRLTQDIEKATRILSNDLLAPIATAPFIIGYYTWLTYESSGWIGPAAIYTYFCIQTII
    NKMILSPIVQKVSEQEKMEGDFRQRHMEVRSNVEAIAFYRAGVLENIMTNQKLKNLIETQKSLTEWRMVLNSITNVFDYFGGILSYLIIGVPVFIT
    HLYDDVSPAELNGIVSRNAFFYLYLIYSFSTVLKLTGDFGELAGVTHRVMELHEELNRLHSDCLETDRPPSTVPSSVVVIASDEDDKSASRHMQEI
    HGKQMSLERDEQEEEEAQYLLGGKTGQEDDWPDDGVAITVDSATLSPPNDHSHLIVQLLSLQIIQGQTLLITGDSGCGKSSLLRMFAGLWHCSSGK
    MDCHWRRLTSNLFFLAQKPYFPSGNTTLRQQIVYPVKALQVDKDVARITQILEWVKMEHLVERCGGLDTPVEWDWMKTLSPGELQRLSLARVFYTK
    PRIVFLDESTSAIGFELEMAIYRKLQEEKITFVSIGHRYSLKQFHDMELRVKGRSGEWSLHDIDTASIASRTASFLGADTVLSM
  • pmp-4
    PEX19=0.038; start position=129; end position=140;

  • MSVQSKFLETGIDPEKRKKALLVGAAGVAAVAVAHWVSLRKSQKSHHKMEKEDSVASDGTPKKNKKKAFDPQFLKQLKELLKIMIPGVFSKEAGII
    GMHSIILICRTFLTIFVAQLEGSMVQAIVEKNVLQFVLHLVKWILVALPATFVNSMIRFFESYLGLAFRTRLTKHAYKQYFSDQTYYAVSNLDTRL
    QNADQCLTEDITMFSQSVAHLYSHLTKPVLDVALITFTLIKLAIQRGTGRSTFLPSCMAIMAVSLTAKILRAVSPRFGHMVAEEARRKGHLRYLHS
    RIITNSEEIAFYGGHQAEYKQLDGAFNSLYQQMMLIFKKRIPYIMIEQFLMKYVWSGTGMVMIALPILATEYADDEKSTKLEDLPDRGVSERTRGY
    ATAKTLLFNSADAVERLMTSYKEVTELAGYTGRVHEMFQVFDDAKKGIYQRQTVSAGAEQGQRGERFDTSKIEGIITDSEADEIILNSVPIVTPNG
    DVVVKNMTLTISPGMHVLITGPNGCGKSSLFRILGGLWPVYRGHLEKPTSDRMYYIPQRPYMTLGTLRDQVIYPDTTIQMRRQGITDQDLMTMLRI
    VHLEHIVEREGGWDAQNDWMDVLSGGEKQRMGMARVFYHRPKYALLDECTSAVSIDVEGSIYQAIKDSGITLLTVTHRPSLWKFHTHLLQYDGEGG
    YKVSSLNEKTIGERMSYSEEKQQLEKQLAEVPRWKERLEEVCQLLGGNEDHLNMTIDTDDSE