Arabidopsis thaliana by Pubmed references

YEAR FIRST AUTHOR JOURNAL TITLE
2009 Yuqing Xiong Plant Cell Physiol. Characterization of Arabidopsis 6-phosphogluconolactonase T-DNA insertion mutants reveals an essential role for the oxidative section of the plastidic pentose phosphate pathway in plant growth and development.[Pubmed]
2009 Daniela Dietrich Mol. Biol. Cell Mutations in the Arabidopsis peroxisomal ABC transporter COMATOSE allow differentiation between multiple functions in planta: insights from an allelic series.[Pubmed]
2009 Melanie Lingard Proc. Natl. Acad. Sci. U.S.A. Peroxisome-associated matrix protein degradation in Arabidopsis.[Pubmed]
2009 Xinchun Zhang Plant J. Two small protein families, DYNAMIN-RELATED PROTEIN3 and FISSION1, are required for peroxisome fission in Arabidopsis.[Pubmed]
2009 Singh Singh Plant J. Molecular components required for the targeting of PEX7 to peroxisomes in Arabidopsis thaliana.[Pubmed]
2009 Wenxu Wiszniewski Plant Mol. Biol. Identification of two Arabidopsis genes encoding a peroxisomal oxidoreductase-like protein and an acyl-CoA synthetase-like protein that are required for responses to pro-auxins.[Pubmed]
2008 Brad Souza New Phytol. Genome-wide analysis of a land plant-specific acyl:coenzyme A synthetase (ACS) gene family in Arabidopsis, poplar, rice and Physcomitrella.[Pubmed]
2008 Holger Schuhmann Plant Physiol. The DEG15 serine protease cleaves peroxisomal targeting signal 2-containing proteins in Arabidopsis.[Pubmed]
2008 Lucie Kienow J. Exp. Bot. Jasmonates meet fatty acids: functional analysis of a new acyl-coenzyme A synthetase family from Arabidopsis thaliana.[Pubmed]
2008 Naxhiely Zolman Genetics Identification and characterization of Arabidopsis indole-3-butyric acid response mutants defective in novel peroxisomal enzymes.[Pubmed]
2008 Itsara Pracharoenwattana Trends Plant Sci. When is a peroxisome not a peroxisome?[Pubmed]
2008 Simon Goepfert Plant J. Peroxisomal Delta(3),Delta(2)-enoyl CoA isomerases and evolution of cytosolic paralogues in embryophytes.[Pubmed]
2008 Scott Lingard Plant Cell Arabidopsis PEROXIN11c-e, FISSION1b, and DYNAMIN-RELATED PROTEIN3A cooperate in cell cycle-associated replication of peroxisomes.[Pubmed]
2008 Stefan Timm Plant Cell A cytosolic pathway for the conversion of hydroxypyruvate to glycerate during photorespiration in Arabidopsis.[Pubmed]
2008 Tomoyuki Tani Planta Identification of the OsOPR7 gene encoding 12-oxophytodienoate reductase involved in the biosynthesis of jasmonic acid in rice.[Pubmed]
2008 Itsara Cousins Plant Physiol. Peroxisomal malate dehydrogenase is not essential for photorespiration in Arabidopsis but its absence causes an increase in the stoichiometry of photorespiratory CO2 release.[Pubmed]
2008 José Castillo Plant Cell Environ. Peroxisome proliferation, wound-activated responses and expression of peroxisome-associated genes are cross-regulated but uncoupled in Arabidopsis thaliana.[Pubmed]
2008 Tomoe Kamada-Nobusada Plant Cell Physiol. A putative peroxisomal polyamine oxidase, AtPAO4, is involved in polyamine catabolism in Arabidopsis thaliana.[Pubmed]
2008 Maite Moschou Plant Physiol. Bridging the gap between plant and mammalian polyamine catabolism: a novel peroxisomal polyamine oxidase responsible for a full back-conversion pathway in Arabidopsis.[Pubmed]
2008 Nicole Linka Plant Cell Peroxisomal ATP import is essential for seedling development in Arabidopsis thaliana.[Pubmed]
2008 Holger Eubel Plant Physiol. Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes.[Pubmed]
2008 Yuko Arai Plant Cell Proteomic identification and characterization of a novel peroxisomal adenine nucleotide transporter supplying ATP for fatty acid beta-oxidation in soybean and Arabidopsis.[Pubmed]
2008 Yoshimi Oshima Plant Cell Physiol. Plant catalase is imported into peroxisomes by Pex5p but is distinct from typical PTS1 import.[Pubmed]
2007 Eastmond Eastmond Plant Cell MONODEHYROASCORBATE REDUCTASE4 is required for seed storage oil hydrolysis and postgerminative growth in Arabidopsis.[Pubmed]
2007 R Hänsch Plant Biol (Stuttg) Significance of plant sulfite oxidase.[Pubmed]
2007 Uwe Schumann Proc. Natl. Acad. Sci. U.S.A. Requirement of the C3HC4 zinc RING finger of the Arabidopsis PEX10 for photorespiration and leaf peroxisome contact with chloroplasts.[Pubmed]
2007 Karnik Karnik J. Exp. Bot. Arabidopsis peroxin 16 trafficks through the ER and an intermediate compartment to pre-existing peroxisomes via overlapping molecular targeting signals.[Pubmed]
2007 Itsara Pracharoenwattana Plant J. Arabidopsis peroxisomal malate dehydrogenase functions in beta-oxidation but not in the glyoxylate cycle.[Pubmed]
2007 Sally Hooks Biochem. J. The Arabidopsis ALDP protein homologue COMATOSE is instrumental in peroxisomal acetate metabolism.[Pubmed]
2007 Rea Rea Plant ATP-binding cassette transporters.[Pubmed]
2007 Michelle Zolman Plant Mol. Biol. IBR3, a novel peroxisomal acyl-CoA dehydrogenase-like protein required for indole-3-butyric acid response.[Pubmed]
2007 Lodewijk Visser Biochem. J. Metabolite transport across the peroxisomal membrane.[Pubmed]
2007 Schilmiller Schilmiller Plant Physiol. Functional diversification of acyl-coenzyme A oxidases in jasmonic acid biosynthesis and action.[Pubmed]
2007 Jae-Yean Lee Mol. Cells Molecular and functional characterization of monocot-specific Pex5p splicing variants, using OsPex5pL and OsPex5pS from rice (Oryza sativa).[Pubmed]
2007 Stephan Wanders Pflugers Arch. The peroxisomal ABC transporter family.[Pubmed]
2007 Travis Orth Plant Cell The PEROXIN11 protein family controls peroxisome proliferation in Arabidopsis.[Pubmed]
2007 Carolin Delker Phytochemistry Jasmonate biosynthesis in Arabidopsis thaliana requires peroxisomal beta-oxidation enzymes--additional proof by properties of pex6 and aim1.[Pubmed]
2007 Michael Helm Proc. Natl. Acad. Sci. U.S.A. Dual specificities of the glyoxysomal/peroxisomal processing protease Deg15 in higher plants.[Pubmed]
2007 Kazumasa Nito Plant Cell Physiol. Functional classification of Arabidopsis peroxisome biogenesis factors proposed from analyses of knockdown mutants.[Pubmed]
2007 Guillaume Queval Plant J. Conditional oxidative stress responses in the Arabidopsis photorespiratory mutant cat2 demonstrate that redox state is a key modulator of daylength-dependent gene expression, and define photoperiod as a crucial factor in the regulation of H2O2-induced cell death.[Pubmed]
2007 Oren Ostersetzer Plant Cell Physiol. Multiple intracellular locations of Lon protease in Arabidopsis: evidence for the localization of AtLon4 to chloroplasts.[Pubmed]
2006 Changle Ma Plant Physiol. Identification and characterization of a stress-inducible and a constitutive small heat-shock protein targeted to the matrix of plant peroxisomes.[Pubmed]
2006 Petra Zimmermann Plant Cell Environ. Senescence-specific regulation of catalases in Arabidopsis thaliana (L.) Heynh.[Pubmed]
2006 Robert Hänsch J. Biol. Chem. Plant sulfite oxidase as novel producer of H2O2: combination of enzyme catalysis with a subsequent non-enzymatic reaction step.[Pubmed]
2006 Savitha Narendra J. Exp. Bot. The Arabidopsis ascorbate peroxidase 3 is a peroxisomal membrane-bound antioxidant enzyme and is dispensable for Arabidopsis growth and development.[Pubmed]
2006 Yves Poirier Biochim. Biophys. Acta Peroxisomal beta-oxidation--a metabolic pathway with multiple functions.[Pubmed]
2006 Lingard Lingard J. Cell. Sci. Five Arabidopsis peroxin 11 homologs individually promote peroxisome elongation, duplication or aggregation.[Pubmed]
2006 Shoji Mano Plant J. The Arabidopsis pex12 and pex13 mutants are defective in both PTS1- and PTS2-dependent protein transport to peroxisomes.[Pubmed]
2006 Ramasubramanian Sundaramoorthy J. Mol. Biol. The crystal structure of a plant 3-ketoacyl-CoA thiolase reveals the potential for redox control of peroxisomal fatty acid beta-oxidation.[Pubmed]
2006 Jae-Yean Lee Plant J. Cloning of two splice variants of the rice PTS1 receptor, OsPex5pL and OsPex5pS, and their functional characterization using pex5-deficient yeast and Arabidopsis.[Pubmed]
2005 Chris Sparkes Plant Physiol. AtPEX2 and AtPEX10 are targeted to peroxisomes independently of known endoplasmic reticulum trafficking routes.[Pubmed]
2005 Melanie Zolman Plant Cell Identification and functional characterization of Arabidopsis PEROXIN4 and the interacting protein PEROXIN22.[Pubmed]
2005 Karen Turner J. Biol. Chem. Characterization of Arabidopsis fluoroacetate-resistant mutants reveals the principal mechanism of acetate activation for entry into the glyoxylate cycle.[Pubmed]
2005 Lisenbee Lisenbee Plant J. Arabidopsis peroxisomes possess functionally redundant membrane and matrix isoforms of monodehydroascorbate reductase.[Pubmed]
2005 Barbara Charlton Plant Cell Rep. Non-coordinate expression of peroxisome biogenesis, beta-oxidation and glyoxylate cycle genes in mature Arabidopsis plants.[Pubmed]
2005 Stefania Bonsegna Arch. Biochem. Biophys. AtLACS7 interacts with the TPR domains of the PTS1 receptor PEX5.[Pubmed]
2005 Helen Pinfield-Wells Plant J. Sucrose rescues seedling establishment but not germination of Arabidopsis mutants disrupted in peroxisomal fatty acid catabolism.[Pubmed]
2005 Makoto Hayashi J. Biol. Chem. Differential contribution of two peroxisomal protein receptors to the maintenance of peroxisomal functions in Arabidopsis.[Pubmed]
2005 Bonnie Woodward Mol. Biol. Cell The Arabidopsis peroxisomal targeting signal type 2 receptor PEX7 is necessary for peroxisome function and dependent on PEX5.[Pubmed]
2005 Itsara Pracharoenwattana Plant Cell Arabidopsis peroxisomal citrate synthase is required for fatty acid respiration and seed germination.[Pubmed]
2005 Jilian Fan Plant Physiol. The Arabidopsis PEX12 gene is required for peroxisome biogenesis and is essential for development.[Pubmed]
2005 Volker Lipka Science Pre- and postinvasion defenses both contribute to nonhost resistance in Arabidopsis.[Pubmed]
2005 Karnik Karnik Plant Physiol. Arabidopsis peroxin 16 coexists at steady state in peroxisomes and endoplasmic reticulum.[Pubmed]
2004 Hunt Hunt Biochem. Biophys. Res. Commun. Sorting pathway and molecular targeting signals for the Arabidopsis peroxin 3.[Pubmed]
2004 Steven Vandenabeele Plant J. Catalase deficiency drastically affects gene expression induced by high light in Arabidopsis thaliana.[Pubmed]
2004 Irene Murgia Plant J. Arabidopsis thaliana plants overexpressing thylakoidal ascorbate peroxidase show increased resistance to Paraquat-induced photooxidative stress and to nitric oxide-induced cell death.[Pubmed]
2004 Lise Pedersen Acta Crystallogr. D Biol. Crystallogr. Expression, purification and crystallization of two peroxisomal acyl-CoA oxidases from Arabidopsis thaliana.[Pubmed]
2004 Martin Fulda Plant Cell Peroxisomal Acyl-CoA synthetase activity is essential for seedling development in Arabidopsis thaliana.[Pubmed]
2004 Bonnie Zolman Proc. Natl. Acad. Sci. U.S.A. An Arabidopsis indole-3-butyric acid-response mutant defective in PEROXIN6, an apparent ATPase implicated in peroxisomal function.[Pubmed]
2004 B Slabas Biochem. Soc. Trans. Proteomic analysis of the Arabidopsis cell wall reveals unexpected proteins with new cellular locations.[Pubmed]
2004 Kathryn Lange FEBS Lett. An Arabidopsis mutant disrupted in valine catabolism is also compromised in peroxisomal fatty acid beta-oxidation.[Pubmed]
2004 Aymeric Goyer J. Biol. Chem. Characterization and metabolic function of a peroxisomal sarcosine and pipecolate oxidase from Arabidopsis.[Pubmed]
2004 Johan Edqvist J. Biol. Chem. Plants express a lipid transfer protein with high similarity to mammalian sterol carrier protein-2.[Pubmed]
2004 Katharina Nowak Plant Cell Physiol. Peroxisomal localization of sulfite oxidase separates it from chloroplast-based sulfur assimilation.[Pubmed]
2003 Nils Schrader Structure The crystal structure of plant sulfite oxidase provides insights into sulfite oxidation in plants and animals.[Pubmed]
2003 Federica Sparkes Plant Physiol. An Arabidopsis pex10 null mutant is embryo lethal, implicating peroxisomes in an essential role during plant embryogenesis.[Pubmed]
2003 Uwe Schumann Proc. Natl. Acad. Sci. U.S.A. AthPEX10, a nuclear gene essential for peroxisome and storage organelle formation during Arabidopsis embryogenesis.[Pubmed]
2003 Akane Kamigaki Plant J. Identification of peroxisomal targeting signal of pumpkin catalase and the binding analysis with PTS1 receptor.[Pubmed]
2003 Liepman Liepman Plant Physiol. Alanine aminotransferase homologs catalyze the glutamate:glyoxylate aminotransferase reaction in peroxisomes of Arabidopsis.[Pubmed]
2003 Alison Murphy Plant Physiol. Characterization of the targeting signal of the Arabidopsis 22-kD integral peroxisomal membrane protein.[Pubmed]
2003 Teresa Rylott J. Biol. Chem. Arabidopsis mutants in short- and medium-chain acyl-CoA oxidase activities accumulate acyl-CoAs and reveal that fatty acid beta-oxidation is essential for embryo development.[Pubmed]
2003 Michael Lisenbee Plant Physiol. Peroxisomal ascorbate peroxidase resides within a subdomain of rough endoplasmic reticulum in wild-type Arabidopsis cells.[Pubmed]
2003 Kazusato Oikawa Plant Cell Chloroplast unusual positioning1 is essential for proper chloroplast positioning.[Pubmed]
2003 Christian Dammann Plant Physiol. Subcellular targeting of nine calcium-dependent protein kinase isoforms from Arabidopsis.[Pubmed]
2003 Daisuke Igarashi Plant J. Identification of photorespiratory glutamate:glyoxylate aminotransferase (GGAT) gene in Arabidopsis.[Pubmed]
2003 Johnson Johnson Plant Physiol. Import of the peroxisomal targeting signal type 2 protein 3-ketoacyl-coenzyme a thiolase into glyoxysomes.[Pubmed]
2002 Martin Fulda Plant J. Two long-chain acyl-CoA synthetases from Arabidopsis thaliana involved in peroxisomal fatty acid beta-oxidation.[Pubmed]
2002 Shoji Mano Plant Cell Physiol. Distribution and characterization of peroxisomes in Arabidopsis by visualization with GFP: dynamic morphology and actin-dependent movement.[Pubmed]
2002 T Yang Proc. Natl. Acad. Sci. U.S.A. Hydrogen peroxide homeostasis: activation of plant catalase by calcium/calmodulin.[Pubmed]
2002 Steven Footitt EMBO J. Control of germination and lipid mobilization by COMATOSE, the Arabidopsis homologue of human ALDP.[Pubmed]
2002 Makoto Hayashi Plant Cell Physiol. Ped3p is a peroxisomal ATP-binding cassette transporter that might supply substrates for fatty acid beta-oxidation.[Pubmed]
2002 Jochen Strassner Plant J. Characterization and cDNA-microarray expression analysis of 12-oxophytodienoate reductases reveals differential roles for octadecanoid biosynthesis in the local versus the systemic wound response.[Pubmed]
2002 Youichiro Fukao Plant Cell Physiol. Proteomic analysis of leaf peroxisomal proteins in greening cotyledons of Arabidopsis thaliana.[Pubmed]
2002 Kazumasa Nito Plant Cell Physiol. Direct interaction and determination of binding domains among peroxisomal import factors in Arabidopsis thaliana.[Pubmed]
2001 T Eilers J. Biol. Chem. Identification and biochemical characterization of Arabidopsis thaliana sulfite oxidase. A new player in plant sulfur metabolism.[Pubmed]
2001 Y Shi Gene Cloning of peroxisomal ascorbate peroxidase gene from barley and enhanced thermotolerance by overexpressing in Arabidopsis thaliana.[Pubmed]
2001 M Zolman J. Biol. Chem. chy1, an Arabidopsis mutant with impaired beta-oxidation, is defective in a peroxisomal beta-hydroxyisobutyryl-CoA hydrolase.[Pubmed]
2001 Mullen Mullen Trends Plant Sci. How are peroxisomes formed? The role of the endoplasmic reticulum and peroxins.[Pubmed]
2001 K Nito Plant Cell Physiol. Pumpkin peroxisomal ascorbate peroxidase is localized on peroxisomal membranes and unknown membranous structures.[Pubmed]
2001 A Kaplan Biochim. Biophys. Acta Identification and characterisation of PEX6 orthologues from plants.[Pubmed]
2001 Liepman Liepman Plant J. Peroxisomal alanine : glyoxylate aminotransferase (AGT1) is a photorespiratory enzyme with multiple substrates in Arabidopsis thaliana.[Pubmed]
2001 Y Hayashi Protoplasma Direct interaction between glyoxysomes and lipid bodies in cotyledons of the Arabidopsis thaliana ped1 mutant.[Pubmed]
2001 V Germain Plant J. Requirement for 3-ketoacyl-CoA thiolase-2 in peroxisome development, fatty acid beta-oxidation and breakdown of triacylglycerol in lipid bodies of Arabidopsis seedlings.[Pubmed]
2001 Y Fukao Plant Cell Physiol. Developmental analysis of a putative ATP/ADP carrier protein localized on glyoxysomal membranes during the peroxisome transition in pumpkin cotyledons.[Pubmed]
2000 Eastmond Eastmond Biochem. Soc. Trans. The multifunctional protein AtMFP2 is co-ordinately expressed with other genes of fatty acid beta-oxidation during seed germination in Arabidopsis thaliana (L.) Heynh.[Pubmed]
2000 A Baker Biochem. Soc. Trans. Biochemical and molecular approaches to understanding protein import into peroxisomes.[Pubmed]
2000 M McClung Plant Physiol. Integrated temporal regulation of the photorespiratory pathway. Circadian regulation of two Arabidopsis genes encoding serine hydroxymethyltransferase.[Pubmed]
2000 M Eastmond Biochem. Soc. Trans. The Arabidopsis acyl-CoA oxidase gene family.[Pubmed]
2000 V Bongcam Planta Importance of sequences adjacent to the terminal tripeptide in the import of a peroxisomal Candida tropicalis protein in plant peroxisomes.[Pubmed]
2000 A Zolman Genetics Genetic analysis of indole-3-butyric acid responses in Arabidopsis thaliana reveals four mutant classes.[Pubmed]
2000 S Mano Cell Biochem. Biophys. A leaf-peroxisomal protein, hydroxypyruvate reductase, is produced by light-regulated alternative splicing.[Pubmed]
2000 P Mullineaux Philos. Trans. R. Soc. Lond., B, Biol. Sci. Are diverse signalling pathways integrated in the regulation of arabidopsis antioxidant defence gene expression in response to excess excitation energy?[Pubmed]
2000 L Allenbach Plant Physiol. Analysis of the alternative pathways for the beta-oxidation of unsaturated fatty acids using transgenic plants synthesizing polyhydroxyalkanoates in peroxisomes.[Pubmed]
2000 M Hayashi EMBO J. AtPex14p maintains peroxisomal functions by determining protein targeting to three kinds of plant peroxisomes.[Pubmed]
2000 A Kato Cell Biochem. Biophys. Transport of peroxisomal proteins synthesized as large precursors in plants.[Pubmed]
2000 E Lopez-Huertas EMBO J. Stress induces peroxisome biogenesis genes.[Pubmed]
1999 Y Lin Science The Pex16p homolog SSE1 and storage organelle formation in Arabidopsis seeds.[Pubmed]
1999 H Hayashi J. Biol. Chem. A novel acyl-CoA oxidase that can oxidize short-chain acyl-CoA in plant peroxisomes.[Pubmed]
1999 M Tugal Plant Physiol. Arabidopsis 22-kilodalton peroxisomal membrane protein. Nucleotide sequence analysis and biochemical characterization.[Pubmed]
1999 S Mano Plant J. Light regulates alternative splicing of hydroxypyruvate reductase in pumpkin.[Pubmed]
1999 J Wang Plant Cell Physiol. Overexpression of an Arabidopsis peroxisomal ascorbate peroxidase gene in tobacco increases protection against oxidative stress.[Pubmed]
1999 A Kato Plant Cell Physiol. Oligomeric proteins containing N-terminal targeting signals are imported into peroxisomes in transgenic Arabidopsis.[Pubmed]
1999 E Lopez-Huertas FEBS Lett. Antibodies against pex14p block ATP-independent binding of matrix proteins to peroxisomes in vitro.[Pubmed]
1998 M Schultz Genetics Arabidopsis mutants define an in vivo role for isoenzymes of aspartate aminotransferase in plant nitrogen assimilation.[Pubmed]
1998 A Kato Plant Cell Physiol. Glyoxysomal malate dehydrogenase in pumpkin: cloning of a cDNA and functional analysis of its presequence.[Pubmed]
1997 S Mano Plant Cell Physiol. Hydroxypyruvate reductase with a carboxy-terminal targeting signal to microbodies is expressed in Arabidopsis.[Pubmed]
1996 M Hayashi Plant J. Transport of chimeric proteins that contain a carboxy-terminal targeting signal into plant microbodies.[Pubmed]
1996 A Kato Plant Cell Targeting and processing of a chimeric protein with the N-terminal presequence of the precursor to glyoxysomal citrate synthase.[Pubmed]
1993 B Olsen Plant Cell Targeting of glyoxysomal proteins to peroxisomes in leaves and roots of a higher plant.[Pubmed]
0 Mol. Membr. Biol. Arabidopsis PEX19 is a dimeric protein that binds the peroxin PEX10.[Pubmed]
0 Autophagy ATG genes involved in non-selective autophagy are conserved from yeast to man, but the selective Cvt and pexophagy pathways also require organism-specific genes.[Pubmed]